Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:20:04 (6768): wrapper (7.7.26015): starting
18:20:04 (6768): wrapper: running run_atlas (--nthreads 8)
[2026-05-08 18:20:04] Arguments: --nthreads 8
[2026-05-08 18:20:04] Threads: 8
[2026-05-08 18:20:04] Checking for CVMFS
[2026-05-08 18:20:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-08 18:20:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-08 18:20:04] Running cvmfs_config stat atlas.cern.ch
[2026-05-08 18:20:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-08 18:20:04] 2.11.2.0 2888 22802 76600 159379 2 49 10551668 20275201 1 130560 0 5327543 99.779 1545082 24243 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-08 18:20:04] CVMFS is ok
[2026-05-08 18:20:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-08 18:20:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-08 18:20:04] Further information can be found at the LHC@home message board.
[2026-05-08 18:20:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-08 18:20:04] Checking for apptainer binary...
[2026-05-08 18:20:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-08 18:20:04] Running /usr/bin/apptainer --version
[2026-05-08 18:20:04] apptainer version 1.3.2-1.el7
[2026-05-08 18:20:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-08 18:20:06] c-204-25.aglt2.org
[2026-05-08 18:20:06] apptainer works
[2026-05-08 18:20:06] Set ATHENA_PROC_NUMBER=8
[2026-05-08 18:20:06] Set ATHENA_CORE_NUMBER=8
[2026-05-08 18:20:06] Starting ATLAS job with PandaID=7134203745
[2026-05-08 18:20:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-08 20:14:47]  *** The last 200 lines of the pilot log: ***
[2026-05-08 20:14:47] 2026-05-09 00:14:01,170 | INFO     | preparing for final server update for job 7134203745 in state='finished'
[2026-05-08 20:14:47] 2026-05-09 00:14:01,171 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7134203745/jobReport.json
[2026-05-08 20:14:47] 2026-05-09 00:14:01,175 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-05-08 20:14:47] 2026-05-09 00:14:01,176 | INFO     | this job has now completed (state=finished)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,176 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,176 | INFO     | log transfer has been attempted: DONE
[2026-05-08 20:14:47] 2026-05-09 00:14:01,177 | INFO     | job 7134203745 has finished - writing final server update
[2026-05-08 20:14:47] 2026-05-09 00:14:01,177 | INFO     | total number of processed events: 400 (read)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,180 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7134203745/memory_monitor_summary.json (trf name=prmon)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,181 | INFO     | extracted standard info from prmon json
[2026-05-08 20:14:47] 2026-05-09 00:14:01,182 | INFO     | extracted standard memory fields from prmon json
[2026-05-08 20:14:47] 2026-05-09 00:14:01,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-08 20:14:47] 2026-05-09 00:14:01,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-08 20:14:47] 2026-05-09 00:14:01,185 | INFO     | fitting pss+swap vs Time
[2026-05-08 20:14:47] 2026-05-09 00:14:01,185 | INFO     | sum of square deviations: 424045160.0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,186 | INFO     | sum of deviations: -3453755523.000002
[2026-05-08 20:14:47] 2026-05-09 00:14:01,186 | INFO     | mean x (centered): 0.0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,186 | INFO     | mean y: 2598483.792792793
[2026-05-08 20:14:47] 2026-05-09 00:14:01,187 | INFO     | intersect: 2598483.792792793
[2026-05-08 20:14:47] 2026-05-09 00:14:01,187 | INFO     | chi2: 1.7672431312558783
[2026-05-08 20:14:47] 2026-05-09 00:14:01,188 | INFO     | sum of square deviations: 369281342.5
[2026-05-08 20:14:47] 2026-05-09 00:14:01,189 | INFO     | sum of deviations: -2283848204.4999933
[2026-05-08 20:14:47] 2026-05-09 00:14:01,189 | INFO     | mean x (centered): 0.0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,189 | INFO     | mean y: 2601744.4245283017
[2026-05-08 20:14:47] 2026-05-09 00:14:01,190 | INFO     | intersect: 2601744.4245283017
[2026-05-08 20:14:47] 2026-05-09 00:14:01,190 | INFO     | chi2: 1.7703815496563065
[2026-05-08 20:14:47] 2026-05-09 00:14:01,190 | INFO     | current chi2=1.7703815496563065 (change=-0.17758837733876906 %)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,190 | INFO     | right removable region: 105
[2026-05-08 20:14:47] 2026-05-09 00:14:01,191 | INFO     | sum of square deviations: 369281342.5
[2026-05-08 20:14:47] 2026-05-09 00:14:01,191 | INFO     | sum of deviations: -21848416848.000004
[2026-05-08 20:14:47] 2026-05-09 00:14:01,192 | INFO     | mean x (centered): 0.0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,192 | INFO     | mean y: 2648705.5283018867
[2026-05-08 20:14:47] 2026-05-09 00:14:01,192 | INFO     | intersect: 2648705.5283018867
[2026-05-08 20:14:47] 2026-05-09 00:14:01,192 | INFO     | chi2: 0.11258609335998382
[2026-05-08 20:14:47] 2026-05-09 00:14:01,192 | INFO     | current chi2=0.11258609335998382 (change=93.62928103277022 %)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,193 | INFO     | sum of square deviations: 319447850.0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,195 | INFO     | sum of deviations: -21341123890.0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,195 | INFO     | mean x (centered): 0.0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,195 | INFO     | mean y: 2647023.5544554456
[2026-05-08 20:14:47] 2026-05-09 00:14:01,195 | INFO     | intersect: 2647023.5544554456
[2026-05-08 20:14:47] 2026-05-09 00:14:01,196 | INFO     | chi2: 0.08596997938858784
[2026-05-08 20:14:47] 2026-05-09 00:14:01,196 | INFO     | current chi2=0.08596997938858784 (change=23.64067637225262 %)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,196 | INFO     | left removable region: 10
[2026-05-08 20:14:47] 2026-05-09 00:14:01,196 | INFO     | sum of square deviations: 265828240.0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,197 | INFO     | sum of deviations: -19163514597.0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,198 | INFO     | mean x (centered): 0.0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,198 | INFO     | mean y: 2654465.8842105265
[2026-05-08 20:14:47] 2026-05-09 00:14:01,198 | INFO     | intersect: 2654465.8842105265
[2026-05-08 20:14:47] 2026-05-09 00:14:01,199 | INFO     | chi2: 0.0792236114710953
[2026-05-08 20:14:47] 2026-05-09 00:14:01,199 | INFO     | current memory leak: -72.09 B/s (using 95 data points, chi2=0.08)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,200 | INFO     | could have reported an average CPU frequency of 1679 MHz (7 samples)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,201 | INFO     | ..............................
[2026-05-08 20:14:47] 2026-05-09 00:14:01,201 | INFO     | . Timing measurements:
[2026-05-08 20:14:47] 2026-05-09 00:14:01,201 | INFO     | . get job = 0 s
[2026-05-08 20:14:47] 2026-05-09 00:14:01,202 | INFO     | . initial setup = 8 s
[2026-05-08 20:14:47] 2026-05-09 00:14:01,202 | INFO     | . payload setup = 17 s
[2026-05-08 20:14:47] 2026-05-09 00:14:01,202 | INFO     | . stage-in = 0 s
[2026-05-08 20:14:47] 2026-05-09 00:14:01,202 | INFO     | . payload execution = 6776 s
[2026-05-08 20:14:47] 2026-05-09 00:14:01,202 | INFO     | . stage-out = 0 s
[2026-05-08 20:14:47] 2026-05-09 00:14:01,202 | INFO     | . log creation = 0 s
[2026-05-08 20:14:47] 2026-05-09 00:14:01,203 | INFO     | ..............................
[2026-05-08 20:14:47] 2026-05-09 00:14:01,294 | INFO     | 
[2026-05-08 20:14:47] 2026-05-09 00:14:01,294 | INFO     | job summary report
[2026-05-08 20:14:47] 2026-05-09 00:14:01,295 | INFO     | --------------------------------------------------
[2026-05-08 20:14:47] 2026-05-09 00:14:01,295 | INFO     | PanDA job id: 7134203745
[2026-05-08 20:14:47] 2026-05-09 00:14:01,295 | INFO     | task id: 50087071
[2026-05-08 20:14:47] 2026-05-09 00:14:01,295 | INFO     | errors: (none)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,296 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-08 20:14:47] 2026-05-09 00:14:01,296 | INFO     | pilot state: finished 
[2026-05-08 20:14:47] 2026-05-09 00:14:01,296 | INFO     | transexitcode: 0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,296 | INFO     | exeerrorcode: 0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,297 | INFO     | exeerrordiag: 
[2026-05-08 20:14:47] 2026-05-09 00:14:01,297 | INFO     | exitcode: 0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,297 | INFO     | exitmsg: OK
[2026-05-08 20:14:47] 2026-05-09 00:14:01,298 | INFO     | cpuconsumptiontime: 50446 s
[2026-05-08 20:14:47] 2026-05-09 00:14:01,298 | INFO     | nevents: 400
[2026-05-08 20:14:47] 2026-05-09 00:14:01,298 | INFO     | neventsw: 0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,298 | INFO     | pid: 15955
[2026-05-08 20:14:47] 2026-05-09 00:14:01,299 | INFO     | pgrp: 15955
[2026-05-08 20:14:47] 2026-05-09 00:14:01,299 | INFO     | corecount: 8
[2026-05-08 20:14:47] 2026-05-09 00:14:01,299 | INFO     | event service: False
[2026-05-08 20:14:47] 2026-05-09 00:14:01,300 | INFO     | sizes: {0: 2266399, 1: 2268001, 11: 2268001, 6797: 2295228, 6798: 2304420}
[2026-05-08 20:14:47] 2026-05-09 00:14:01,300 | INFO     | --------------------------------------------------
[2026-05-08 20:14:47] 2026-05-09 00:14:01,300 | INFO     | 
[2026-05-08 20:14:47] 2026-05-09 00:14:01,300 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-08 20:14:47] 2026-05-09 00:14:01,327 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,327 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,328 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,328 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,331 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,331 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,331 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,332 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,333 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-08 20:14:47] 2026-05-09 00:14:01,333 | INFO     | job 7134203745 has completed (purged errors)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,334 | INFO     | overall cleanup function is called
[2026-05-08 20:14:47] 2026-05-09 00:14:01,365 | WARNING  | process 15955 can no longer be monitored (due to stat problems) - aborting
[2026-05-08 20:14:47] 2026-05-09 00:14:01,437 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-05-08 20:14:47] 2026-05-09 00:14:01,508 | INFO     | number of running child processes to parent process 15955: 1
[2026-05-08 20:14:47] 2026-05-09 00:14:01,508 | INFO     | maximum number of monitored processes: 6
[2026-05-08 20:14:47] 2026-05-09 00:14:01,508 | INFO     | aborting job monitoring since job object (job id=7134203745) has expired
[2026-05-08 20:14:47] 2026-05-09 00:14:02,344 | INFO     | --- collectZombieJob: --- 10, [15955]
[2026-05-08 20:14:47] 2026-05-09 00:14:02,344 | INFO     | zombie collector waiting for pid 15955
[2026-05-08 20:14:47] 2026-05-09 00:14:02,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-08 20:14:47] 2026-05-09 00:14:02,345 | INFO     | collected zombie processes
[2026-05-08 20:14:47] 2026-05-09 00:14:02,345 | INFO     | will attempt to kill all subprocesses of pid=15955
[2026-05-08 20:14:47] 2026-05-09 00:14:02,427 | INFO     | process IDs to be killed: [15955] (in reverse order)
[2026-05-08 20:14:47] 2026-05-09 00:14:02,488 | WARNING  | found no corresponding commands to process id(s)
[2026-05-08 20:14:47] 2026-05-09 00:14:02,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-08 20:14:47] 2026-05-09 00:14:02,493 | INFO     | did not find any defunct processes belonging to 15955
[2026-05-08 20:14:47] 2026-05-09 00:14:02,496 | INFO     | did not find any defunct processes belonging to 15955
[2026-05-08 20:14:47] 2026-05-09 00:14:02,496 | INFO     | Ready for new job
[2026-05-08 20:14:47] 2026-05-09 00:14:02,498 | INFO     | ***************************************
[2026-05-08 20:14:47] 2026-05-09 00:14:02,499 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-08 20:14:47] 2026-05-09 00:14:02,499 | INFO     | ***************************************
[2026-05-08 20:14:47] 2026-05-09 00:14:02,499 | INFO     | 
[2026-05-08 20:14:47] 2026-05-09 00:14:02,499 | INFO     | architecture information:
[2026-05-08 20:14:47] 2026-05-09 00:14:02,500 | INFO     | executing command: cat /etc/os-release
[2026-05-08 20:14:47] 2026-05-09 00:14:02,519 | INFO     | cat /etc/os-release:
[2026-05-08 20:14:47] NAME="CentOS Linux"
[2026-05-08 20:14:47] VERSION="7 (Core)"
[2026-05-08 20:14:47] ID="centos"
[2026-05-08 20:14:47] ID_LIKE="rhel fedora"
[2026-05-08 20:14:47] VERSION_ID="7"
[2026-05-08 20:14:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-08 20:14:47] ANSI_COLOR="0;31"
[2026-05-08 20:14:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-08 20:14:47] HOME_URL="https://www.centos.org/"
[2026-05-08 20:14:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-08 20:14:47] 
[2026-05-08 20:14:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-08 20:14:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-08 20:14:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-08 20:14:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-08 20:14:47] 
[2026-05-08 20:14:47] 2026-05-09 00:14:02,520 | INFO     | ***************************************
[2026-05-08 20:14:47] 2026-05-09 00:14:03,023 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-08 20:14:47] 2026-05-09 00:14:03,043 | INFO     | sufficient remaining disk space (18080595968 B)
[2026-05-08 20:14:47] 2026-05-09 00:14:03,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-08 20:14:47] 2026-05-09 00:14:03,045 | INFO     | current server update state: UPDATING_FINAL
[2026-05-08 20:14:47] 2026-05-09 00:14:03,045 | INFO     | update_server=False
[2026-05-08 20:14:47] 2026-05-09 00:14:03,045 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-08 20:14:47] 2026-05-09 00:14:03,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-08 20:14:47] 2026-05-09 00:14:03,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-08 20:14:47] 2026-05-09 00:14:03,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-08 20:14:47] 2026-05-09 00:14:03,047 | INFO     | aborting loop
[2026-05-08 20:14:47] 2026-05-09 00:14:03,114 | INFO     | all data control threads have been joined
[2026-05-08 20:14:47] 2026-05-09 00:14:03,383 | INFO     | all payload control threads have been joined
[2026-05-08 20:14:47] 2026-05-09 00:14:04,047 | INFO     | [job] retrieve thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:04,052 | INFO     | [job] queue monitor thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:04,053 | INFO     | [job] job monitor thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:04,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-08 20:14:47] 2026-05-09 00:14:04,086 | INFO     | all job control threads have been joined
[2026-05-08 20:14:47] 2026-05-09 00:14:04,089 | INFO     | [data] copytool_in thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:04,119 | INFO     | [data] control thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:04,289 | INFO     | [payload] validate_post thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:04,389 | INFO     | [payload] control thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:04,669 | INFO     | job.realtimelogging is not enabled
[2026-05-08 20:14:47] 2026-05-09 00:14:04,947 | INFO     | [job] validate thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:05,091 | INFO     | [job] control thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:05,168 | INFO     | [job] create_data_payload thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:05,173 | INFO     | [payload] validate_pre thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:05,207 | INFO     | [payload] failed_post thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:05,552 | INFO     | [payload] execute_payloads thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:05,671 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:06,089 | INFO     | [data] copytool_out thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:07,052 | INFO     | [data] queue_monitor thread has finished
[2026-05-08 20:14:47] 2026-05-09 00:14:33,563 | INFO     | PID=11555 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-08 20:14:47] 2026-05-09 00:14:33,563 | INFO     | found 0 job(s) in 20 queues
[2026-05-08 20:14:47] 2026-05-09 00:14:33,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-08 20:14:47] 2026-05-09 00:14:33,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-08 20:14:47] 2026-05-09 00:14:42,012 | INFO     | [monitor] cgroup control has ended
[2026-05-08 20:14:47] 2026-05-09 00:14:42,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140012943628096)>', '<ExcThread(monitor, started 140012259612416)>']
[2026-05-08 20:14:47] 2026-05-09 00:14:42,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-08 20:14:47] 2026-05-09 00:14:42,607 | INFO     | [monitor] control thread has ended
[2026-05-08 20:14:47] 2026-05-09 00:14:47,187 | INFO     | all workflow threads have been joined
[2026-05-08 20:14:47] 2026-05-09 00:14:47,187 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-08 20:14:47] 2026-05-09 00:14:47,194 | INFO     | traces error code: 0
[2026-05-08 20:14:47] 2026-05-09 00:14:47,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-08 20:14:47] 2026-05-09 00:14:47,338 [wrapper] ==== pilot stdout END ====
[2026-05-08 20:14:47] 2026-05-09 00:14:47,343 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-08 20:14:47] 2026-05-09 00:14:47,348 [wrapper] pilotpid: 11555
[2026-05-08 20:14:47] 2026-05-09 00:14:47,353 [wrapper] Pilot exit status: 0
[2026-05-08 20:14:47] 2026-05-09 00:14:47,370 [wrapper] pandaids: 7134203745
[2026-05-08 20:14:47] 2026-05-09 00:14:47,415 [wrapper] cleanup supervisor_pilot 23673 11556
[2026-05-08 20:14:47] 2026-05-09 00:14:47,419 [wrapper] Test setup, not cleaning
[2026-05-08 20:14:47] 2026-05-09 00:14:47,424 [wrapper] apfmon messages muted
[2026-05-08 20:14:47] 2026-05-09 00:14:47,429 [wrapper] ==== wrapper stdout END ====
[2026-05-08 20:14:47] 2026-05-09 00:14:47,434 [wrapper] ==== wrapper stderr END ====
[2026-05-08 20:14:47]  *** Error codes and diagnostics ***
[2026-05-08 20:14:47]     "exeErrorCode": 0,
[2026-05-08 20:14:47]     "pilotErrorCode": 0,
[2026-05-08 20:14:47]  *** Listing of results directory ***
[2026-05-08 20:14:47] total 615748
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas      5631 May  8 16:40 queuedata.json
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas    683926 May  8 16:40 pilot3.tar.gz
[2026-05-08 20:14:47] -rwx------ 1 boincer umatlas     36281 May  8 16:43 runpilot2-wrapper.sh
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas       100 May  8 18:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-08 20:14:47] -rwxr-xr-x 1 boincer umatlas      7986 May  8 18:20 run_atlas
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas       105 May  8 18:20 job.xml
[2026-05-08 20:14:47] -rw-r--r-- 2 boincer umatlas 440295429 May  8 18:20 EVNT.46701437._000291.pool.root.1
[2026-05-08 20:14:47] -rw-r--r-- 2 boincer umatlas     15667 May  8 18:20 start_atlas.sh
[2026-05-08 20:14:47] drwxrwx--x 2 boincer umatlas      4096 May  8 18:20 shared
[2026-05-08 20:14:47] -rw-r--r-- 2 boincer umatlas    697405 May  8 18:20 input.tar.gz
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas         0 May  8 18:20 boinc_lockfile
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas      2543 May  8 18:20 pandaJob.out
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas        57 May  8 18:20 setup.sh.local
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas    995359 May  8 18:20 agis_schedconf.cvmfs.json
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas   1502997 May  8 18:20 agis_ddmendpoints.agis.ALL.json
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas       432 May  8 18:20 workernode_map.json
[2026-05-08 20:14:47] drwx------ 5 boincer umatlas      4096 May  8 18:20 pilot3
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas      5826 May  8 20:10 init_data.xml
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas 184119079 May  8 20:13 HITS.50087071._030563.pool.root.1
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas       488 May  8 20:13 boinc_task_state.xml
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas      1046 May  8 20:13 memory_monitor_summary.json
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas    356249 May  8 20:14 log.50087071._030563.job.log.tgz.1
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas      6428 May  8 20:14 heartbeat_new.json
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas      6319 May  8 20:14 heartbeat.json
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas        95 May  8 20:14 pilot_heartbeat.json
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas      8192 May  8 20:14 boinc_mmap_file
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas        27 May  8 20:14 wrapper_checkpoint.txt
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas      4817 May  8 20:14 pilotlog.txt
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas    638397 May  8 20:14 log.50087071._030563.job.log.1
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas       357 May  8 20:14 output.list
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas       410 May  8 20:14 runtime_log
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas   1013760 May  8 20:14 result.tar.gz
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas      8964 May  8 20:14 runtime_log.err
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas       659 May  8 20:14 4aff8c49535c.diag
[2026-05-08 20:14:47] -rw-r--r-- 1 boincer umatlas     21184 May  8 20:14 stderr.txt
[2026-05-08 20:14:47] HITS file was successfully produced:
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas 184119079 May  8 20:13 shared/HITS.pool.root.1
[2026-05-08 20:14:47]  *** Contents of shared directory: ***
[2026-05-08 20:14:47] total 611476
[2026-05-08 20:14:47] -rw-r--r-- 2 boincer umatlas 440295429 May  8 18:20 ATLAS.root_0
[2026-05-08 20:14:47] -rw-r--r-- 2 boincer umatlas     15667 May  8 18:20 start_atlas.sh
[2026-05-08 20:14:47] -rw-r--r-- 2 boincer umatlas    697405 May  8 18:20 input.tar.gz
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas 184119079 May  8 20:13 HITS.pool.root.1
[2026-05-08 20:14:47] -rw------- 1 boincer umatlas   1013760 May  8 20:14 result.tar.gz
20:14:48 (6768): run_atlas exited; CPU time 50401.136397
20:14:48 (6768): called boinc_finish(0)

</stderr_txt>
]]>

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