Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:24:06 (209712): wrapper (7.7.26015): starting
01:24:06 (209712): wrapper: running run_atlas (--nthreads 4)
[2026-05-09 01:24:06] Arguments: --nthreads 4
[2026-05-09 01:24:06] Threads: 4
[2026-05-09 01:24:06] Checking for CVMFS
[2026-05-09 01:24:06] No cvmfs_config command found, will try listing directly
[2026-05-09 01:24:06] CVMFS is ok
[2026-05-09 01:24:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-09 01:24:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-09 01:24:06] Further information can be found at the LHC@home message board.
[2026-05-09 01:24:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-09 01:24:06] Checking for apptainer binary...
[2026-05-09 01:24:06] which: no apptainer in ((null))
[2026-05-09 01:24:06] apptainer is not installed, using version from CVMFS
[2026-05-09 01:24:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-09 01:24:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-05-09 01:24:06] apptainer works
[2026-05-09 01:24:06] Set ATHENA_PROC_NUMBER=4
[2026-05-09 01:24:06] Set ATHENA_CORE_NUMBER=4
[2026-05-09 01:24:06] Starting ATLAS job with PandaID=7134161706
[2026-05-09 01:24:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-09 04:20:49]  *** The last 200 lines of the pilot log: ***
[2026-05-09 04:20:49] 2026-05-09 02:19:43,407 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7134161706/jobReport.json
[2026-05-09 04:20:49] 2026-05-09 02:19:43,410 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/0/workernode_map.json
[2026-05-09 04:20:49] 2026-05-09 02:19:43,411 | INFO     | this job has now completed (state=finished)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,411 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,411 | INFO     | log transfer has been attempted: DONE
[2026-05-09 04:20:49] 2026-05-09 02:19:43,411 | INFO     | job 7134161706 has finished - writing final server update
[2026-05-09 04:20:49] 2026-05-09 02:19:43,411 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3373507/.job.ad'
[2026-05-09 04:20:49] 2026-05-09 02:19:43,412 | INFO     | total number of processed events: 400 (read)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,425 | INFO     | using path: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7134161706/memory_monitor_summary.json (trf name=prmon)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,426 | INFO     | extracted standard info from prmon json
[2026-05-09 04:20:49] 2026-05-09 02:19:43,426 | INFO     | extracted standard memory fields from prmon json
[2026-05-09 04:20:49] 2026-05-09 02:19:43,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-09 04:20:49] 2026-05-09 02:19:43,427 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-09 04:20:49] 2026-05-09 02:19:43,430 | INFO     | fitting pss+swap vs Time
[2026-05-09 04:20:49] 2026-05-09 02:19:43,431 | INFO     | sum of square deviations: 1577789583.0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,432 | INFO     | sum of deviations: -2141106496.500001
[2026-05-09 04:20:49] 2026-05-09 02:19:43,432 | INFO     | mean x (centered): 0.0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,432 | INFO     | mean y: 2337603.4011627906
[2026-05-09 04:20:49] 2026-05-09 02:19:43,432 | INFO     | intersect: 2337603.4011627906
[2026-05-09 04:20:49] 2026-05-09 02:19:43,432 | INFO     | chi2: 1.2864803984114848
[2026-05-09 04:20:49] 2026-05-09 02:19:43,433 | INFO     | sum of square deviations: 1444149868.0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,434 | INFO     | sum of deviations: -1856270869.9999988
[2026-05-09 04:20:49] 2026-05-09 02:19:43,434 | INFO     | mean x (centered): 0.0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,434 | INFO     | mean y: 2337928.2814371255
[2026-05-09 04:20:49] 2026-05-09 02:19:43,434 | INFO     | intersect: 2337928.2814371255
[2026-05-09 04:20:49] 2026-05-09 02:19:43,434 | INFO     | chi2: 1.2867211857139889
[2026-05-09 04:20:49] 2026-05-09 02:19:43,434 | INFO     | current chi2=1.2867211857139889 (change=-0.018716748642374638 %)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,434 | INFO     | right removable region: 166
[2026-05-09 04:20:49] 2026-05-09 02:19:43,435 | INFO     | sum of square deviations: 1444149868.0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,436 | INFO     | sum of deviations: -21591521813.999996
[2026-05-09 04:20:49] 2026-05-09 02:19:43,436 | INFO     | mean x (centered): 0.0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,436 | INFO     | mean y: 2359428.4251497006
[2026-05-09 04:20:49] 2026-05-09 02:19:43,436 | INFO     | intersect: 2359428.4251497006
[2026-05-09 04:20:49] 2026-05-09 02:19:43,436 | INFO     | chi2: 0.05414711723972646
[2026-05-09 04:20:49] 2026-05-09 02:19:43,436 | INFO     | current chi2=0.05414711723972646 (change=95.7910655065879 %)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,437 | INFO     | sum of square deviations: 1318277740.5
[2026-05-09 04:20:49] 2026-05-09 02:19:43,438 | INFO     | sum of deviations: -19860538783.000008
[2026-05-09 04:20:49] 2026-05-09 02:19:43,438 | INFO     | mean x (centered): 0.0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,438 | INFO     | mean y: 2357300.049382716
[2026-05-09 04:20:49] 2026-05-09 02:19:43,438 | INFO     | intersect: 2357300.049382716
[2026-05-09 04:20:49] 2026-05-09 02:19:43,438 | INFO     | chi2: 0.05043234861479193
[2026-05-09 04:20:49] 2026-05-09 02:19:43,438 | INFO     | current chi2=0.05043234861479193 (change=6.860510428446405 %)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,438 | INFO     | left removable region: 10
[2026-05-09 04:20:49] 2026-05-09 02:19:43,439 | INFO     | sum of square deviations: 1177156955.0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,439 | INFO     | sum of deviations: -18960276413.499996
[2026-05-09 04:20:49] 2026-05-09 02:19:43,440 | INFO     | mean x (centered): 0.0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,440 | INFO     | mean y: 2358467.5064102565
[2026-05-09 04:20:49] 2026-05-09 02:19:43,440 | INFO     | intersect: 2358467.5064102565
[2026-05-09 04:20:49] 2026-05-09 02:19:43,440 | INFO     | chi2: 0.04834203594672506
[2026-05-09 04:20:49] 2026-05-09 02:19:43,440 | INFO     | current memory leak: -16.11 B/s (using 156 data points, chi2=0.05)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,448 | INFO     | could have reported an average CPU frequency of 2545 MHz (9 samples)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,449 | INFO     | ..............................
[2026-05-09 04:20:49] 2026-05-09 02:19:43,449 | INFO     | . Timing measurements:
[2026-05-09 04:20:49] 2026-05-09 02:19:43,449 | INFO     | . get job = 0 s
[2026-05-09 04:20:49] 2026-05-09 02:19:43,449 | INFO     | . initial setup = 6 s
[2026-05-09 04:20:49] 2026-05-09 02:19:43,449 | INFO     | . payload setup = 10 s
[2026-05-09 04:20:49] 2026-05-09 02:19:43,449 | INFO     | . stage-in = 0 s
[2026-05-09 04:20:49] 2026-05-09 02:19:43,449 | INFO     | . payload execution = 10490 s
[2026-05-09 04:20:49] 2026-05-09 02:19:43,449 | INFO     | . stage-out = 0 s
[2026-05-09 04:20:49] 2026-05-09 02:19:43,449 | INFO     | . log creation = 0 s
[2026-05-09 04:20:49] 2026-05-09 02:19:43,449 | INFO     | ..............................
[2026-05-09 04:20:49] 2026-05-09 02:19:43,582 | INFO     | 
[2026-05-09 04:20:49] 2026-05-09 02:19:43,583 | INFO     | job summary report
[2026-05-09 04:20:49] 2026-05-09 02:19:43,584 | INFO     | --------------------------------------------------
[2026-05-09 04:20:49] 2026-05-09 02:19:43,584 | INFO     | PanDA job id: 7134161706
[2026-05-09 04:20:49] 2026-05-09 02:19:43,584 | INFO     | task id: 50087071
[2026-05-09 04:20:49] 2026-05-09 02:19:43,584 | INFO     | errors: (none)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,584 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-09 04:20:49] 2026-05-09 02:19:43,585 | INFO     | pilot state: finished 
[2026-05-09 04:20:49] 2026-05-09 02:19:43,585 | INFO     | transexitcode: 0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,585 | INFO     | exeerrorcode: 0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,585 | INFO     | exeerrordiag: 
[2026-05-09 04:20:49] 2026-05-09 02:19:43,585 | INFO     | exitcode: 0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,585 | INFO     | exitmsg: OK
[2026-05-09 04:20:49] 2026-05-09 02:19:43,585 | INFO     | cpuconsumptiontime: 39465 s
[2026-05-09 04:20:49] 2026-05-09 02:19:43,586 | INFO     | nevents: 400
[2026-05-09 04:20:49] 2026-05-09 02:19:43,586 | INFO     | neventsw: 0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,586 | INFO     | pid: 219081
[2026-05-09 04:20:49] 2026-05-09 02:19:43,586 | INFO     | pgrp: 219081
[2026-05-09 04:20:49] 2026-05-09 02:19:43,586 | INFO     | corecount: 4
[2026-05-09 04:20:49] 2026-05-09 02:19:43,586 | INFO     | event service: False
[2026-05-09 04:20:49] 2026-05-09 02:19:43,586 | INFO     | sizes: {0: 2266171, 1: 2268000, 12: 2268000, 10504: 2296690, 10506: 2305766, 10507: 2305968}
[2026-05-09 04:20:49] 2026-05-09 02:19:43,587 | INFO     | --------------------------------------------------
[2026-05-09 04:20:49] 2026-05-09 02:19:43,587 | INFO     | 
[2026-05-09 04:20:49] 2026-05-09 02:19:43,587 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/0
[2026-05-09 04:20:49] 2026-05-09 02:19:43,609 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,610 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,610 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,610 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,611 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-09 04:20:49] 2026-05-09 02:19:43,612 | INFO     | job 7134161706 has completed (purged errors)
[2026-05-09 04:20:49] 2026-05-09 02:19:43,612 | INFO     | overall cleanup function is called
[2026-05-09 04:20:49] 2026-05-09 02:19:43,713 | WARNING  | process 219081 can no longer be monitored (due to stat problems) - aborting
[2026-05-09 04:20:49] 2026-05-09 02:19:44,029 | INFO     | using path: /var/lib/boinc/var/slot36/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-05-09 04:20:49] 2026-05-09 02:19:44,359 | INFO     | number of running child processes to parent process 219081: 1
[2026-05-09 04:20:49] 2026-05-09 02:19:44,359 | INFO     | maximum number of monitored processes: 6
[2026-05-09 04:20:49] 2026-05-09 02:19:44,359 | INFO     | aborting job monitoring since job object (job id=7134161706) has expired
[2026-05-09 04:20:49] 2026-05-09 02:19:44,620 | INFO     | --- collectZombieJob: --- 10, [219081]
[2026-05-09 04:20:49] 2026-05-09 02:19:44,621 | INFO     | zombie collector waiting for pid 219081
[2026-05-09 04:20:49] 2026-05-09 02:19:44,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-09 04:20:49] 2026-05-09 02:19:44,621 | INFO     | collected zombie processes
[2026-05-09 04:20:49] 2026-05-09 02:19:44,621 | INFO     | will attempt to kill all subprocesses of pid=219081
[2026-05-09 04:20:49] 2026-05-09 02:19:44,938 | INFO     | process IDs to be killed: [219081] (in reverse order)
[2026-05-09 04:20:49] 2026-05-09 02:19:45,076 | WARNING  | found no corresponding commands to process id(s)
[2026-05-09 04:20:49] 2026-05-09 02:19:45,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-09 04:20:49] 2026-05-09 02:19:45,090 | INFO     | did not find any defunct processes belonging to 219081
[2026-05-09 04:20:49] 2026-05-09 02:19:45,103 | INFO     | did not find any defunct processes belonging to 219081
[2026-05-09 04:20:49] 2026-05-09 02:19:45,103 | INFO     | Ready for new job
[2026-05-09 04:20:49] 2026-05-09 02:19:45,105 | INFO     | ***************************************
[2026-05-09 04:20:49] 2026-05-09 02:19:45,105 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-09 04:20:49] 2026-05-09 02:19:45,106 | INFO     | ***************************************
[2026-05-09 04:20:49] 2026-05-09 02:19:45,106 | INFO     | 
[2026-05-09 04:20:49] 2026-05-09 02:19:45,110 | INFO     | architecture information:
[2026-05-09 04:20:49] 2026-05-09 02:19:45,110 | INFO     | executing command: cat /etc/os-release
[2026-05-09 04:20:49] 2026-05-09 02:19:45,129 | INFO     | cat /etc/os-release:
[2026-05-09 04:20:49] NAME="CentOS Linux"
[2026-05-09 04:20:49] VERSION="7 (Core)"
[2026-05-09 04:20:49] ID="centos"
[2026-05-09 04:20:49] ID_LIKE="rhel fedora"
[2026-05-09 04:20:49] VERSION_ID="7"
[2026-05-09 04:20:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-09 04:20:49] ANSI_COLOR="0;31"
[2026-05-09 04:20:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-09 04:20:49] HOME_URL="https://www.centos.org/"
[2026-05-09 04:20:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-09 04:20:49] 
[2026-05-09 04:20:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-09 04:20:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-09 04:20:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-09 04:20:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-09 04:20:49] 
[2026-05-09 04:20:49] 2026-05-09 02:19:45,129 | INFO     | ***************************************
[2026-05-09 04:20:49] 2026-05-09 02:19:45,632 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/0
[2026-05-09 04:20:49] 2026-05-09 02:19:45,651 | INFO     | sufficient remaining disk space (31944867840 B)
[2026-05-09 04:20:49] 2026-05-09 02:19:45,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-09 04:20:49] 2026-05-09 02:19:45,652 | INFO     | current server update state: UPDATING_FINAL
[2026-05-09 04:20:49] 2026-05-09 02:19:45,652 | INFO     | update_server=False
[2026-05-09 04:20:49] 2026-05-09 02:19:45,652 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-09 04:20:49] 2026-05-09 02:19:45,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-09 04:20:49] 2026-05-09 02:19:45,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-09 04:20:49] 2026-05-09 02:19:45,653 | INFO     | aborting loop
[2026-05-09 04:20:49] 2026-05-09 02:19:45,682 | INFO     | all data control threads have been joined
[2026-05-09 04:20:49] 2026-05-09 02:19:46,085 | INFO     | all payload control threads have been joined
[2026-05-09 04:20:49] 2026-05-09 02:19:46,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-09 04:20:49] 2026-05-09 02:19:46,453 | INFO     | all job control threads have been joined
[2026-05-09 04:20:49] 2026-05-09 02:19:46,656 | INFO     | [job] retrieve thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:46,659 | INFO     | [job] job monitor thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:46,673 | INFO     | [payload] execute_payloads thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:46,687 | INFO     | [data] control thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:46,733 | INFO     | [job] validate thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:47,090 | INFO     | [payload] control thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:47,094 | INFO     | [payload] validate_post thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:47,458 | INFO     | [job] control thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:47,508 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:47,528 | INFO     | [job] create_data_payload thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:47,669 | INFO     | [data] copytool_in thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:47,724 | INFO     | [payload] failed_post thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:48,093 | INFO     | [payload] validate_pre thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:48,127 | INFO     | [data] copytool_out thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:48,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-09 04:20:49] 2026-05-09 02:19:49,596 | INFO     | [job] queue monitor thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:19:49,658 | INFO     | [data] queue_monitor thread has finished
[2026-05-09 04:20:49] 2026-05-09 02:20:15,948 | INFO     | PID=213850 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-09 04:20:49] 2026-05-09 02:20:15,949 | INFO     | .. there are 12 such processes running
[2026-05-09 04:20:49] 2026-05-09 02:20:15,950 | INFO     | found 0 job(s) in 20 queues
[2026-05-09 04:20:49] 2026-05-09 02:20:15,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-09 04:20:49] 2026-05-09 02:20:15,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-09 04:20:49] 2026-05-09 02:20:42,356 | INFO     | [monitor] cgroup control has ended
[2026-05-09 04:20:49] 2026-05-09 02:20:43,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23168894342976)>', '<ExcThread(monitor, started 23168592893696)>']
[2026-05-09 04:20:49] 2026-05-09 02:20:44,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-09 04:20:49] 2026-05-09 02:20:44,090 | INFO     | [monitor] control thread has ended
[2026-05-09 04:20:49] 2026-05-09 02:20:48,862 | INFO     | all workflow threads have been joined
[2026-05-09 04:20:49] 2026-05-09 02:20:48,862 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-09 04:20:49] 2026-05-09 02:20:48,863 | INFO     | traces error code: 0
[2026-05-09 04:20:49] 2026-05-09 02:20:48,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-09 04:20:49] 2026-05-09 02:20:49,014 [wrapper] ==== pilot stdout END ====
[2026-05-09 04:20:49] 2026-05-09 02:20:49,017 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-09 04:20:49] 2026-05-09 02:20:49,019 [wrapper] pilotpid: 213850
[2026-05-09 04:20:49] 2026-05-09 02:20:49,021 [wrapper] Pilot exit status: 0
[2026-05-09 04:20:49] 2026-05-09 02:20:49,034 [wrapper] pandaids: 7134161706
[2026-05-09 04:20:49] 2026-05-09 02:20:49,120 [wrapper] cleanup supervisor_pilot  457050 213851
[2026-05-09 04:20:49] 2026-05-09 02:20:49,124 [wrapper] Test setup, not cleaning
[2026-05-09 04:20:49] 2026-05-09 02:20:49,127 [wrapper] apfmon messages muted
[2026-05-09 04:20:49] 2026-05-09 02:20:49,131 [wrapper] ==== wrapper stdout END ====
[2026-05-09 04:20:49] 2026-05-09 02:20:49,134 [wrapper] ==== wrapper stderr END ====
[2026-05-09 04:20:49]  *** Error codes and diagnostics ***
[2026-05-09 04:20:49]     "exeErrorCode": 0,
[2026-05-09 04:20:49]     "pilotErrorCode": 0,
[2026-05-09 04:20:49]  *** Listing of results directory ***
[2026-05-09 04:20:49] total 620048
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc    683926 May  8 20:17 pilot3.tar.gz
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc      5631 May  8 20:21 queuedata.json
[2026-05-09 04:20:49] -rwx------. 1 boinc boinc     36281 May  8 20:21 runpilot2-wrapper.sh
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc       100 May  9 01:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-09 04:20:49] -rwxr-xr-x. 1 boinc boinc      7986 May  9 01:24 run_atlas
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc       105 May  9 01:24 job.xml
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc      6483 May  9 01:24 init_data.xml
[2026-05-09 04:20:49] -rw-r--r--. 2 boinc boinc 444021671 May  9 01:24 EVNT.46701437._000008.pool.root.1
[2026-05-09 04:20:49] -rw-r--r--. 2 boinc boinc     15667 May  9 01:24 start_atlas.sh
[2026-05-09 04:20:49] drwxrwx--x. 2 boinc boinc      4096 May  9 01:24 shared
[2026-05-09 04:20:49] -rw-r--r--. 2 boinc boinc    697407 May  9 01:24 input.tar.gz
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc         0 May  9 01:24 boinc_lockfile
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc      2537 May  9 01:24 pandaJob.out
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc    995359 May  9 01:24 agis_schedconf.cvmfs.json
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc   1502997 May  9 01:24 agis_ddmendpoints.agis.ALL.json
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc       452 May  9 01:24 workernode_map.json
[2026-05-09 04:20:49] drwx------. 5 boinc boinc      4096 May  9 01:24 pilot3
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc 184196515 May  9 04:19 HITS.50087071._016508.pool.root.1
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc       488 May  9 04:19 boinc_task_state.xml
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc      1035 May  9 04:19 memory_monitor_summary.json
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc    307059 May  9 04:19 log.50087071._016508.job.log.tgz.1
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc      6423 May  9 04:19 heartbeat_new.json
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc      6314 May  9 04:19 heartbeat.json
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc        95 May  9 04:20 pilot_heartbeat.json
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc        27 May  9 04:20 wrapper_checkpoint.txt
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc      8192 May  9 04:20 boinc_mmap_file
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc      4831 May  9 04:20 pilotlog.txt
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc    989757 May  9 04:20 log.50087071._016508.job.log.1
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc       357 May  9 04:20 output.list
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc       410 May  9 04:20 runtime_log
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc   1310720 May  9 04:20 result.tar.gz
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc      8828 May  9 04:20 runtime_log.err
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc       666 May  9 04:20 29b0c76033ae.diag
[2026-05-09 04:20:49] -rw-r--r--. 1 boinc boinc     21115 May  9 04:20 stderr.txt
[2026-05-09 04:20:49] HITS file was successfully produced:
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc 184196515 May  9 04:19 shared/HITS.pool.root.1
[2026-05-09 04:20:49]  *** Contents of shared directory: ***
[2026-05-09 04:20:49] total 615484
[2026-05-09 04:20:49] -rw-r--r--. 2 boinc boinc 444021671 May  9 01:24 ATLAS.root_0
[2026-05-09 04:20:49] -rw-r--r--. 2 boinc boinc     15667 May  9 01:24 start_atlas.sh
[2026-05-09 04:20:49] -rw-r--r--. 2 boinc boinc    697407 May  9 01:24 input.tar.gz
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc 184196515 May  9 04:19 HITS.pool.root.1
[2026-05-09 04:20:49] -rw-------. 1 boinc boinc   1310720 May  9 04:20 result.tar.gz
04:20:51 (209712): run_atlas exited; CPU time 39855.224681
04:20:51 (209712): called boinc_finish(0)

</stderr_txt>
]]>

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