Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:23:11 (2715476): wrapper (7.7.26015): starting
01:23:11 (2715476): wrapper: running run_atlas (--nthreads 4)
[2026-05-09 01:23:11] Arguments: --nthreads 4
[2026-05-09 01:23:11] Threads: 4
[2026-05-09 01:23:11] Checking for CVMFS
[2026-05-09 01:23:11] No cvmfs_config command found, will try listing directly
[2026-05-09 01:23:11] CVMFS is ok
[2026-05-09 01:23:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-09 01:23:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-09 01:23:11] Further information can be found at the LHC@home message board.
[2026-05-09 01:23:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-09 01:23:11] Checking for apptainer binary...
[2026-05-09 01:23:11] which: no apptainer in ((null))
[2026-05-09 01:23:11] apptainer is not installed, using version from CVMFS
[2026-05-09 01:23:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-09 01:23:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-05-09 01:23:12] apptainer works
[2026-05-09 01:23:12] Set ATHENA_PROC_NUMBER=4
[2026-05-09 01:23:12] Set ATHENA_CORE_NUMBER=4
[2026-05-09 01:23:12] Starting ATLAS job with PandaID=7121726101
[2026-05-09 01:23:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-09 03:32:46]  *** The last 200 lines of the pilot log: ***
[2026-05-09 03:32:46] 2026-05-09 01:32:05,061 | INFO     | monitor loop #573: job 0:7121726101 is in state 'finished'
[2026-05-09 03:32:46] 2026-05-09 01:32:05,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,631 | INFO     | job 7121726101 has state=finished
[2026-05-09 03:32:46] 2026-05-09 01:32:05,631 | INFO     | preparing for final server update for job 7121726101 in state='finished'
[2026-05-09 03:32:46] 2026-05-09 01:32:05,632 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/0/PanDA_Pilot-7121726101/jobReport.json
[2026-05-09 03:32:46] 2026-05-09 01:32:05,634 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/0/workernode_map.json
[2026-05-09 03:32:46] 2026-05-09 01:32:05,635 | INFO     | this job has now completed (state=finished)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,635 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,635 | INFO     | log transfer has been attempted: DONE
[2026-05-09 03:32:46] 2026-05-09 01:32:05,635 | INFO     | job 7121726101 has finished - writing final server update
[2026-05-09 03:32:46] 2026-05-09 01:32:05,636 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2975182/.job.ad'
[2026-05-09 03:32:46] 2026-05-09 01:32:05,636 | INFO     | total number of processed events: 400 (read)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,648 | INFO     | using path: /var/lib/boinc/var/slot56/slots/0/PanDA_Pilot-7121726101/memory_monitor_summary.json (trf name=prmon)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,649 | INFO     | extracted standard info from prmon json
[2026-05-09 03:32:46] 2026-05-09 01:32:05,649 | INFO     | extracted standard memory fields from prmon json
[2026-05-09 03:32:46] 2026-05-09 01:32:05,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-09 03:32:46] 2026-05-09 01:32:05,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-09 03:32:46] 2026-05-09 01:32:05,652 | INFO     | fitting pss+swap vs Time
[2026-05-09 03:32:46] 2026-05-09 01:32:05,652 | INFO     | sum of square deviations: 620244187.5
[2026-05-09 03:32:46] 2026-05-09 01:32:05,653 | INFO     | sum of deviations: -1545376562.0000007
[2026-05-09 03:32:46] 2026-05-09 01:32:05,653 | INFO     | mean x (centered): 0.0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,653 | INFO     | mean y: 2382494.888888889
[2026-05-09 03:32:46] 2026-05-09 01:32:05,653 | INFO     | intersect: 2382494.888888889
[2026-05-09 03:32:46] 2026-05-09 01:32:05,654 | INFO     | chi2: 1.4116414811008458
[2026-05-09 03:32:46] 2026-05-09 01:32:05,654 | INFO     | sum of square deviations: 549294020.0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,655 | INFO     | sum of deviations: -1066362960.0000007
[2026-05-09 03:32:46] 2026-05-09 01:32:05,655 | INFO     | mean x (centered): 0.0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,655 | INFO     | mean y: 2383525.0165289254
[2026-05-09 03:32:46] 2026-05-09 01:32:05,655 | INFO     | intersect: 2383525.0165289254
[2026-05-09 03:32:46] 2026-05-09 01:32:05,655 | INFO     | chi2: 1.4128661622502239
[2026-05-09 03:32:46] 2026-05-09 01:32:05,655 | INFO     | current chi2=1.4128661622502239 (change=-0.0867558204950933 %)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,655 | INFO     | right removable region: 120
[2026-05-09 03:32:46] 2026-05-09 01:32:05,656 | INFO     | sum of square deviations: 549294020.0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,656 | INFO     | sum of deviations: -17309843363.999996
[2026-05-09 03:32:46] 2026-05-09 01:32:05,656 | INFO     | mean x (centered): 0.0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,656 | INFO     | mean y: 2415646.7933884296
[2026-05-09 03:32:46] 2026-05-09 01:32:05,657 | INFO     | intersect: 2415646.7933884296
[2026-05-09 03:32:46] 2026-05-09 01:32:05,657 | INFO     | chi2: 0.05059720734750639
[2026-05-09 03:32:46] 2026-05-09 01:32:05,657 | INFO     | current chi2=0.05059720734750639 (change=96.41571829498457 %)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,657 | INFO     | sum of square deviations: 483971865.0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,658 | INFO     | sum of deviations: -16180665776.000004
[2026-05-09 03:32:46] 2026-05-09 01:32:05,658 | INFO     | mean x (centered): 0.0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,658 | INFO     | mean y: 2412958.206896552
[2026-05-09 03:32:46] 2026-05-09 01:32:05,658 | INFO     | intersect: 2412958.206896552
[2026-05-09 03:32:46] 2026-05-09 01:32:05,658 | INFO     | chi2: 0.04519236316165982
[2026-05-09 03:32:46] 2026-05-09 01:32:05,658 | INFO     | current chi2=0.04519236316165982 (change=10.682099801923046 %)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,659 | INFO     | left removable region: 10
[2026-05-09 03:32:46] 2026-05-09 01:32:05,659 | INFO     | sum of square deviations: 412686807.5
[2026-05-09 03:32:46] 2026-05-09 01:32:05,659 | INFO     | sum of deviations: -15004832520.999998
[2026-05-09 03:32:46] 2026-05-09 01:32:05,659 | INFO     | mean x (centered): 0.0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,660 | INFO     | mean y: 2415979.5090909093
[2026-05-09 03:32:46] 2026-05-09 01:32:05,660 | INFO     | intersect: 2415979.5090909093
[2026-05-09 03:32:46] 2026-05-09 01:32:05,660 | INFO     | chi2: 0.041135410083918564
[2026-05-09 03:32:46] 2026-05-09 01:32:05,660 | INFO     | current memory leak: -36.36 B/s (using 110 data points, chi2=0.04)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,660 | INFO     | could have reported an average CPU frequency of 2632 MHz (8 samples)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,661 | INFO     | ..............................
[2026-05-09 03:32:46] 2026-05-09 01:32:05,661 | INFO     | . Timing measurements:
[2026-05-09 03:32:46] 2026-05-09 01:32:05,661 | INFO     | . get job = 0 s
[2026-05-09 03:32:46] 2026-05-09 01:32:05,661 | INFO     | . initial setup = 6 s
[2026-05-09 03:32:46] 2026-05-09 01:32:05,661 | INFO     | . payload setup = 10 s
[2026-05-09 03:32:46] 2026-05-09 01:32:05,661 | INFO     | . stage-in = 0 s
[2026-05-09 03:32:46] 2026-05-09 01:32:05,661 | INFO     | . payload execution = 7687 s
[2026-05-09 03:32:46] 2026-05-09 01:32:05,661 | INFO     | . stage-out = 0 s
[2026-05-09 03:32:46] 2026-05-09 01:32:05,661 | INFO     | . log creation = 0 s
[2026-05-09 03:32:46] 2026-05-09 01:32:05,661 | INFO     | ..............................
[2026-05-09 03:32:46] 2026-05-09 01:32:05,967 | INFO     | 
[2026-05-09 03:32:46] 2026-05-09 01:32:05,967 | INFO     | job summary report
[2026-05-09 03:32:46] 2026-05-09 01:32:05,967 | INFO     | --------------------------------------------------
[2026-05-09 03:32:46] 2026-05-09 01:32:05,967 | INFO     | PanDA job id: 7121726101
[2026-05-09 03:32:46] 2026-05-09 01:32:05,967 | INFO     | task id: 50017005
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | errors: (none)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | pilot state: finished 
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | transexitcode: 0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | exeerrorcode: 0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | exeerrordiag: 
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | exitcode: 0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | exitmsg: OK
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | cpuconsumptiontime: 29294 s
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | nevents: 400
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | neventsw: 0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | pid: 2724140
[2026-05-09 03:32:46] 2026-05-09 01:32:05,968 | INFO     | pgrp: 2724140
[2026-05-09 03:32:46] 2026-05-09 01:32:05,969 | INFO     | corecount: 4
[2026-05-09 03:32:46] 2026-05-09 01:32:05,969 | INFO     | event service: False
[2026-05-09 03:32:46] 2026-05-09 01:32:05,969 | INFO     | sizes: {0: 2266138, 1: 2267967, 12: 2267967, 7700: 2295563, 7701: 2304583, 7705: 2304639, 7706: 2304961}
[2026-05-09 03:32:46] 2026-05-09 01:32:05,969 | INFO     | --------------------------------------------------
[2026-05-09 03:32:46] 2026-05-09 01:32:05,969 | INFO     | 
[2026-05-09 03:32:46] 2026-05-09 01:32:05,969 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/0
[2026-05-09 03:32:46] 2026-05-09 01:32:05,991 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,992 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,992 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,992 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-09 03:32:46] 2026-05-09 01:32:05,994 | INFO     | job 7121726101 has completed (purged errors)
[2026-05-09 03:32:46] 2026-05-09 01:32:05,994 | INFO     | overall cleanup function is called
[2026-05-09 03:32:46] 2026-05-09 01:32:07,001 | INFO     | --- collectZombieJob: --- 10, [2724140]
[2026-05-09 03:32:46] 2026-05-09 01:32:07,002 | INFO     | zombie collector waiting for pid 2724140
[2026-05-09 03:32:46] 2026-05-09 01:32:07,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-09 03:32:46] 2026-05-09 01:32:07,002 | INFO     | collected zombie processes
[2026-05-09 03:32:46] 2026-05-09 01:32:07,002 | INFO     | will attempt to kill all subprocesses of pid=2724140
[2026-05-09 03:32:46] 2026-05-09 01:32:07,285 | INFO     | process IDs to be killed: [2724140] (in reverse order)
[2026-05-09 03:32:46] 2026-05-09 01:32:07,400 | WARNING  | found no corresponding commands to process id(s)
[2026-05-09 03:32:46] 2026-05-09 01:32:07,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-09 03:32:46] 2026-05-09 01:32:07,411 | INFO     | did not find any defunct processes belonging to 2724140
[2026-05-09 03:32:46] 2026-05-09 01:32:07,422 | INFO     | did not find any defunct processes belonging to 2724140
[2026-05-09 03:32:46] 2026-05-09 01:32:07,423 | INFO     | Ready for new job
[2026-05-09 03:32:46] 2026-05-09 01:32:07,425 | INFO     | ***************************************
[2026-05-09 03:32:46] 2026-05-09 01:32:07,425 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-09 03:32:46] 2026-05-09 01:32:07,425 | INFO     | ***************************************
[2026-05-09 03:32:46] 2026-05-09 01:32:07,425 | INFO     | 
[2026-05-09 03:32:46] 2026-05-09 01:32:07,429 | INFO     | architecture information:
[2026-05-09 03:32:46] 2026-05-09 01:32:07,429 | INFO     | executing command: cat /etc/os-release
[2026-05-09 03:32:46] 2026-05-09 01:32:07,446 | INFO     | cat /etc/os-release:
[2026-05-09 03:32:46] NAME="CentOS Linux"
[2026-05-09 03:32:46] VERSION="7 (Core)"
[2026-05-09 03:32:46] ID="centos"
[2026-05-09 03:32:46] ID_LIKE="rhel fedora"
[2026-05-09 03:32:46] VERSION_ID="7"
[2026-05-09 03:32:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-09 03:32:46] ANSI_COLOR="0;31"
[2026-05-09 03:32:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-09 03:32:46] HOME_URL="https://www.centos.org/"
[2026-05-09 03:32:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-09 03:32:46] 
[2026-05-09 03:32:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-09 03:32:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-09 03:32:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-09 03:32:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-09 03:32:46] 
[2026-05-09 03:32:46] 2026-05-09 01:32:07,447 | INFO     | ***************************************
[2026-05-09 03:32:46] 2026-05-09 01:32:07,949 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/0
[2026-05-09 03:32:46] 2026-05-09 01:32:07,967 | INFO     | sufficient remaining disk space (30731665408 B)
[2026-05-09 03:32:46] 2026-05-09 01:32:07,967 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-09 03:32:46] 2026-05-09 01:32:07,968 | INFO     | current server update state: UPDATING_FINAL
[2026-05-09 03:32:46] 2026-05-09 01:32:07,968 | INFO     | update_server=False
[2026-05-09 03:32:46] 2026-05-09 01:32:07,968 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-09 03:32:46] 2026-05-09 01:32:07,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-09 03:32:46] 2026-05-09 01:32:08,302 | INFO     | all payload control threads have been joined
[2026-05-09 03:32:46] 2026-05-09 01:32:08,302 | INFO     | all job control threads have been joined
[2026-05-09 03:32:46] 2026-05-09 01:32:08,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-09 03:32:46] 2026-05-09 01:32:08,569 | INFO     | aborting loop
[2026-05-09 03:32:46] 2026-05-09 01:32:08,611 | INFO     | all data control threads have been joined
[2026-05-09 03:32:46] 2026-05-09 01:32:08,973 | INFO     | [job] retrieve thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:09,308 | INFO     | [payload] control thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:09,308 | INFO     | [job] control thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:09,310 | INFO     | [data] copytool_in thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:09,376 | INFO     | [payload] validate_pre thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:09,574 | INFO     | [job] job monitor thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:09,617 | INFO     | [data] control thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:09,626 | INFO     | [payload] validate_post thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:09,971 | INFO     | [data] copytool_out thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:09,987 | INFO     | [job] validate thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:10,316 | INFO     | [payload] failed_post thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:10,388 | INFO     | [payload] execute_payloads thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:10,448 | INFO     | [job] create_data_payload thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:10,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-09 03:32:46] 2026-05-09 01:32:11,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-09 03:32:46] 2026-05-09 01:32:11,771 | INFO     | [job] queue monitor thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:15,068 | INFO     | [data] queue_monitor thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:18,413 | INFO     | job.realtimelogging is not enabled
[2026-05-09 03:32:46] 2026-05-09 01:32:19,418 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-09 03:32:46] 2026-05-09 01:32:39,086 | INFO     | PID=2719295 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-09 03:32:46] 2026-05-09 01:32:39,086 | INFO     | .. there are 10 such processes running
[2026-05-09 03:32:46] 2026-05-09 01:32:39,088 | INFO     | found 0 job(s) in 20 queues
[2026-05-09 03:32:46] 2026-05-09 01:32:39,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-09 03:32:46] 2026-05-09 01:32:39,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-09 03:32:46] 2026-05-09 01:32:40,179 | INFO     | [monitor] cgroup control has ended
[2026-05-09 03:32:46] 2026-05-09 01:32:40,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23063071622976)>', '<ExcThread(monitor, started 23062766417664)>']
[2026-05-09 03:32:46] 2026-05-09 01:32:41,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-09 03:32:46] 2026-05-09 01:32:41,098 | INFO     | [monitor] control thread has ended
[2026-05-09 03:32:46] 2026-05-09 01:32:45,854 | INFO     | all workflow threads have been joined
[2026-05-09 03:32:46] 2026-05-09 01:32:45,854 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-09 03:32:46] 2026-05-09 01:32:45,855 | INFO     | traces error code: 0
[2026-05-09 03:32:46] 2026-05-09 01:32:45,855 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-09 03:32:46] 2026-05-09 01:32:45,990 [wrapper] ==== pilot stdout END ====
[2026-05-09 03:32:46] 2026-05-09 01:32:45,993 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-09 03:32:46] 2026-05-09 01:32:45,995 [wrapper] pilotpid: 2719295
[2026-05-09 03:32:46] 2026-05-09 01:32:45,997 [wrapper] Pilot exit status: 0
[2026-05-09 03:32:46] 2026-05-09 01:32:46,008 [wrapper] pandaids: 7121726101
[2026-05-09 03:32:46] 2026-05-09 01:32:46,080 [wrapper] cleanup supervisor_pilot 2893780 2719296
[2026-05-09 03:32:46] 2026-05-09 01:32:46,083 [wrapper] Test setup, not cleaning
[2026-05-09 03:32:46] 2026-05-09 01:32:46,085 [wrapper] apfmon messages muted
[2026-05-09 03:32:46] 2026-05-09 01:32:46,088 [wrapper] ==== wrapper stdout END ====
[2026-05-09 03:32:46] 2026-05-09 01:32:46,091 [wrapper] ==== wrapper stderr END ====
[2026-05-09 03:32:46]  *** Error codes and diagnostics ***
[2026-05-09 03:32:46]     "exeErrorCode": 0,
[2026-05-09 03:32:46]     "pilotErrorCode": 0,
[2026-05-09 03:32:46]  *** Listing of results directory ***
[2026-05-09 03:32:46] total 452156
[2026-05-09 03:32:46] -rwx------. 1 boinc boinc     36322 Apr 30 10:51 runpilot2-wrapper.sh
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:51 pilot3.tar.gz
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:56 queuedata.json
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc       100 May  9 01:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-09 03:32:46] -rwxr-xr-x. 1 boinc boinc      7986 May  9 01:23 run_atlas
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc       105 May  9 01:23 job.xml
[2026-05-09 03:32:46] -rw-r--r--. 2 boinc boinc 301760185 May  9 01:23 EVNT.50017000._000003.pool.root.1
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc      6483 May  9 01:23 init_data.xml
[2026-05-09 03:32:46] -rw-r--r--. 2 boinc boinc     15667 May  9 01:23 start_atlas.sh
[2026-05-09 03:32:46] drwxrwx--x. 2 boinc boinc      4096 May  9 01:23 shared
[2026-05-09 03:32:46] -rw-r--r--. 2 boinc boinc    697392 May  9 01:23 input.tar.gz
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc         0 May  9 01:23 boinc_lockfile
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc      2515 May  9 01:23 pandaJob.out
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc    995359 May  9 01:23 agis_schedconf.cvmfs.json
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc   1502997 May  9 01:23 agis_ddmendpoints.agis.ALL.json
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc       452 May  9 01:23 workernode_map.json
[2026-05-09 03:32:46] drwx------. 5 boinc boinc      4096 May  9 01:23 pilot3
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc 155052511 May  9 03:31 HITS.50017005._000069.pool.root.1
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc       487 May  9 03:31 boinc_task_state.xml
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc      1033 May  9 03:31 memory_monitor_summary.json
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc    281487 May  9 03:32 log.50017005._000069.job.log.tgz.1
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc      6419 May  9 03:32 heartbeat_new.json
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc      6310 May  9 03:32 heartbeat.json
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc        95 May  9 03:32 pilot_heartbeat.json
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc        27 May  9 03:32 wrapper_checkpoint.txt
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc      8192 May  9 03:32 boinc_mmap_file
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc      4904 May  9 03:32 pilotlog.txt
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc    751090 May  9 03:32 log.50017005._000069.job.log.1
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc       357 May  9 03:32 output.list
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc       410 May  9 03:32 runtime_log
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc   1054720 May  9 03:32 result.tar.gz
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc      8827 May  9 03:32 runtime_log.err
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc       662 May  9 03:32 18078fe2323e.diag
[2026-05-09 03:32:46] -rw-r--r--. 1 boinc boinc     21071 May  9 03:32 stderr.txt
[2026-05-09 03:32:46] HITS file was successfully produced:
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc 155052511 May  9 03:31 shared/HITS.pool.root.1
[2026-05-09 03:32:46]  *** Contents of shared directory: ***
[2026-05-09 03:32:46] total 447848
[2026-05-09 03:32:46] -rw-r--r--. 2 boinc boinc 301760185 May  9 01:23 ATLAS.root_0
[2026-05-09 03:32:46] -rw-r--r--. 2 boinc boinc     15667 May  9 01:23 start_atlas.sh
[2026-05-09 03:32:46] -rw-r--r--. 2 boinc boinc    697392 May  9 01:23 input.tar.gz
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc 155052511 May  9 03:31 HITS.pool.root.1
[2026-05-09 03:32:46] -rw-------. 1 boinc boinc   1054720 May  9 03:32 result.tar.gz
03:32:47 (2715476): run_atlas exited; CPU time 29556.540286
03:32:47 (2715476): called boinc_finish(0)

</stderr_txt>
]]>

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