Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:25:35 (2871439): wrapper (7.7.26015): starting
09:25:35 (2871439): wrapper: running run_atlas (--nthreads 10)
[2026-05-08 09:25:35] Arguments: --nthreads 10
[2026-05-08 09:25:35] Threads: 10
[2026-05-08 09:25:35] Checking for CVMFS
[2026-05-08 09:25:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-08 09:25:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-08 09:25:35] Running cvmfs_config stat atlas.cern.ch
[2026-05-08 09:25:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-08 09:25:36] 2.13.3.0 12984 11495 234196 159363 3 53 28917855 32935936 21270 16776704 0 44047243 99.489 60935399 35553 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-08 09:25:36] CVMFS is ok
[2026-05-08 09:25:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-08 09:25:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-08 09:25:36] Further information can be found at the LHC@home message board.
[2026-05-08 09:25:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-08 09:25:36] Checking for apptainer binary...
[2026-05-08 09:25:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-08 09:25:36] Running /usr/bin/apptainer --version
[2026-05-08 09:25:36] apptainer version 1.4.5-3.el9
[2026-05-08 09:25:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-08 09:25:36] c6-8-25-3.aglt2.org
[2026-05-08 09:25:36] apptainer works
[2026-05-08 09:25:36] Set ATHENA_PROC_NUMBER=10
[2026-05-08 09:25:36] Set ATHENA_CORE_NUMBER=10
[2026-05-08 09:25:36] Starting ATLAS job with PandaID=7116245388
[2026-05-08 09:25:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-08 11:48:23]  *** The last 200 lines of the pilot log: ***
[2026-05-08 11:48:23] 2026-05-08 15:47:38,617 | INFO     | extracted standard info from prmon json
[2026-05-08 11:48:23] 2026-05-08 15:47:38,617 | INFO     | extracted standard memory fields from prmon json
[2026-05-08 11:48:23] 2026-05-08 15:47:38,617 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-08 11:48:23] 2026-05-08 15:47:38,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-08 11:48:23] 2026-05-08 15:47:38,626 | INFO     | fitting pss+swap vs Time
[2026-05-08 11:48:23] 2026-05-08 15:47:38,626 | INFO     | sum of square deviations: 832733856.7913682
[2026-05-08 11:48:23] 2026-05-08 15:47:38,627 | INFO     | sum of deviations: 2859494382.6474876
[2026-05-08 11:48:23] 2026-05-08 15:47:38,627 | INFO     | mean x (centered): 0.0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,627 | INFO     | mean y: 2578355.4028776977
[2026-05-08 11:48:23] 2026-05-08 15:47:38,628 | INFO     | intersect: 2578355.4028776977
[2026-05-08 11:48:23] 2026-05-08 15:47:38,628 | INFO     | chi2: 2.228588578031826
[2026-05-08 11:48:23] 2026-05-08 15:47:38,628 | INFO     | sum of square deviations: 746061792.0895548
[2026-05-08 11:48:23] 2026-05-08 15:47:38,629 | INFO     | sum of deviations: 11766142010.67165
[2026-05-08 11:48:23] 2026-05-08 15:47:38,629 | INFO     | mean x (centered): 0.0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,629 | INFO     | mean y: 2593569.104477612
[2026-05-08 11:48:23] 2026-05-08 15:47:38,629 | INFO     | intersect: 2593569.104477612
[2026-05-08 11:48:23] 2026-05-08 15:47:38,650 | INFO     | chi2: 1.5435629782821934
[2026-05-08 11:48:23] 2026-05-08 15:47:38,650 | INFO     | current chi2=1.5435629782821934 (change=30.738091655957955 %)
[2026-05-08 11:48:23] 2026-05-08 15:47:38,650 | INFO     | sum of square deviations: 665605193.8759687
[2026-05-08 11:48:23] 2026-05-08 15:47:38,651 | INFO     | sum of deviations: 11582612916.635656
[2026-05-08 11:48:23] 2026-05-08 15:47:38,651 | INFO     | mean x (centered): 0.0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,651 | INFO     | mean y: 2593221.007751938
[2026-05-08 11:48:23] 2026-05-08 15:47:38,651 | INFO     | intersect: 2593221.007751938
[2026-05-08 11:48:23] 2026-05-08 15:47:38,652 | INFO     | chi2: 1.5457571625735433
[2026-05-08 11:48:23] 2026-05-08 15:47:38,652 | INFO     | current chi2=1.5457571625735433 (change=-0.14215061660729 %)
[2026-05-08 11:48:23] 2026-05-08 15:47:38,652 | INFO     | right removable region: 128
[2026-05-08 11:48:23] 2026-05-08 15:47:38,652 | INFO     | sum of square deviations: 746046298.5373125
[2026-05-08 11:48:23] 2026-05-08 15:47:38,653 | INFO     | sum of deviations: -19338812072.89552
[2026-05-08 11:48:23] 2026-05-08 15:47:38,653 | INFO     | mean x (centered): 0.0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,653 | INFO     | mean y: 2616807.5074626864
[2026-05-08 11:48:23] 2026-05-08 15:47:38,653 | INFO     | intersect: 2616807.5074626864
[2026-05-08 11:48:23] 2026-05-08 15:47:38,666 | INFO     | chi2: 0.753221649327537
[2026-05-08 11:48:23] 2026-05-08 15:47:38,666 | INFO     | current chi2=0.753221649327537 (change=66.20185274427175 %)
[2026-05-08 11:48:23] 2026-05-08 15:47:38,666 | INFO     | sum of square deviations: 665607396.8372093
[2026-05-08 11:48:23] 2026-05-08 15:47:38,667 | INFO     | sum of deviations: -19909259506.627907
[2026-05-08 11:48:23] 2026-05-08 15:47:38,667 | INFO     | mean x (centered): 0.0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,667 | INFO     | mean y: 2617807.9534883723
[2026-05-08 11:48:23] 2026-05-08 15:47:38,667 | INFO     | intersect: 2617807.9534883723
[2026-05-08 11:48:23] 2026-05-08 15:47:38,667 | INFO     | chi2: 0.7358410602237812
[2026-05-08 11:48:23] 2026-05-08 15:47:38,668 | INFO     | current chi2=0.7358410602237812 (change=2.3074999396622395 %)
[2026-05-08 11:48:23] 2026-05-08 15:47:38,668 | INFO     | left removable region: 10
[2026-05-08 11:48:23] 2026-05-08 15:47:38,668 | INFO     | sum of square deviations: 509421798.33898443
[2026-05-08 11:48:23] 2026-05-08 15:47:38,677 | INFO     | sum of deviations: -10092855578.118647
[2026-05-08 11:48:23] 2026-05-08 15:47:38,677 | INFO     | mean x (centered): 0.0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,677 | INFO     | mean y: 2637531.9915254237
[2026-05-08 11:48:23] 2026-05-08 15:47:38,677 | INFO     | intersect: 2637531.9915254237
[2026-05-08 11:48:23] 2026-05-08 15:47:38,677 | INFO     | chi2: 0.021406280552048074
[2026-05-08 11:48:23] 2026-05-08 15:47:38,678 | INFO     | current memory leak: -19.81 B/s (using 118 data points, chi2=0.02)
[2026-05-08 11:48:23] 2026-05-08 15:47:38,678 | INFO     | could have reported an average CPU frequency of 2675 MHz (8 samples)
[2026-05-08 11:48:23] 2026-05-08 15:47:38,678 | INFO     | ..............................
[2026-05-08 11:48:23] 2026-05-08 15:47:38,678 | INFO     | . Timing measurements:
[2026-05-08 11:48:23] 2026-05-08 15:47:38,679 | INFO     | . get job = 0 s
[2026-05-08 11:48:23] 2026-05-08 15:47:38,679 | INFO     | . initial setup = 10 s
[2026-05-08 11:48:23] 2026-05-08 15:47:38,679 | INFO     | . payload setup = 13 s
[2026-05-08 11:48:23] 2026-05-08 15:47:38,679 | INFO     | . stage-in = 0 s
[2026-05-08 11:48:23] 2026-05-08 15:47:38,679 | INFO     | . payload execution = 8463 s
[2026-05-08 11:48:23] 2026-05-08 15:47:38,679 | INFO     | . stage-out = 2 s
[2026-05-08 11:48:23] 2026-05-08 15:47:38,679 | INFO     | . log creation = 0 s
[2026-05-08 11:48:23] 2026-05-08 15:47:38,679 | INFO     | ..............................
[2026-05-08 11:48:23] 2026-05-08 15:47:38,760 | WARNING  | process 2880370 can no longer be monitored (due to stat problems) - aborting
[2026-05-08 11:48:23] 2026-05-08 15:47:38,761 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7116245388/memory_monitor_summary.json (trf name=prmon)
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | 
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | job summary report
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | --------------------------------------------------
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | PanDA job id: 7116245388
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | task id: 49718416
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | errors: (none)
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | pilot state: finished 
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | transexitcode: 0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | exeerrorcode: 0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | exeerrordiag: 
[2026-05-08 11:48:23] 2026-05-08 15:47:38,914 | INFO     | exitcode: 0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,915 | INFO     | exitmsg: OK
[2026-05-08 11:48:23] 2026-05-08 15:47:38,915 | INFO     | cpuconsumptiontime: 43616 s
[2026-05-08 11:48:23] 2026-05-08 15:47:38,915 | INFO     | nevents: 400
[2026-05-08 11:48:23] 2026-05-08 15:47:38,915 | INFO     | neventsw: 0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,915 | INFO     | pid: 2880370
[2026-05-08 11:48:23] 2026-05-08 15:47:38,915 | INFO     | pgrp: 2880370
[2026-05-08 11:48:23] 2026-05-08 15:47:38,915 | INFO     | corecount: 10
[2026-05-08 11:48:23] 2026-05-08 15:47:38,915 | INFO     | event service: False
[2026-05-08 11:48:23] 2026-05-08 15:47:38,916 | INFO     | sizes: {0: 2266185, 1: 2268014, 11: 2268014, 8481: 2296080, 8486: 2305272}
[2026-05-08 11:48:23] 2026-05-08 15:47:38,916 | INFO     | --------------------------------------------------
[2026-05-08 11:48:23] 2026-05-08 15:47:38,916 | INFO     | 
[2026-05-08 11:48:23] 2026-05-08 15:47:38,916 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-08 11:48:23] 2026-05-08 15:47:38,966 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,968 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,968 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,976 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,978 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,978 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,978 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-08 11:48:23] 2026-05-08 15:47:38,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,978 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-08 11:48:23] 2026-05-08 15:47:38,978 | INFO     | job 7116245388 has completed (purged errors)
[2026-05-08 11:48:23] 2026-05-08 15:47:38,978 | INFO     | overall cleanup function is called
[2026-05-08 11:48:23] 2026-05-08 15:47:39,836 | INFO     | number of running child processes to parent process 2880370: 1
[2026-05-08 11:48:23] 2026-05-08 15:47:39,836 | INFO     | maximum number of monitored processes: 6
[2026-05-08 11:48:23] 2026-05-08 15:47:39,837 | INFO     | aborting job monitoring since job object (job id=7116245388) has expired
[2026-05-08 11:48:23] 2026-05-08 15:47:40,110 | INFO     | --- collectZombieJob: --- 10, [2880370]
[2026-05-08 11:48:23] 2026-05-08 15:47:40,111 | INFO     | zombie collector waiting for pid 2880370
[2026-05-08 11:48:23] 2026-05-08 15:47:40,111 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-08 11:48:23] 2026-05-08 15:47:40,111 | INFO     | collected zombie processes
[2026-05-08 11:48:23] 2026-05-08 15:47:40,111 | INFO     | will attempt to kill all subprocesses of pid=2880370
[2026-05-08 11:48:23] 2026-05-08 15:47:41,252 | INFO     | PID=2875549 has CPU usage=16.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-08 11:48:23] 2026-05-08 15:47:41,253 | INFO     | .. there are 19 such processes running
[2026-05-08 11:48:23] 2026-05-08 15:47:41,282 | INFO     | process IDs to be killed: [2880370] (in reverse order)
[2026-05-08 11:48:23] 2026-05-08 15:47:41,680 | WARNING  | found no corresponding commands to process id(s)
[2026-05-08 11:48:23] 2026-05-08 15:47:41,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-08 11:48:23] 2026-05-08 15:47:41,706 | INFO     | did not find any defunct processes belonging to 2880370
[2026-05-08 11:48:23] 2026-05-08 15:47:41,765 | INFO     | did not find any defunct processes belonging to 2880370
[2026-05-08 11:48:23] 2026-05-08 15:47:41,766 | INFO     | Ready for new job
[2026-05-08 11:48:23] 2026-05-08 15:47:41,768 | INFO     | ***************************************
[2026-05-08 11:48:23] 2026-05-08 15:47:41,768 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-08 11:48:23] 2026-05-08 15:47:41,768 | INFO     | ***************************************
[2026-05-08 11:48:23] 2026-05-08 15:47:41,768 | INFO     | 
[2026-05-08 11:48:23] 2026-05-08 15:47:41,808 | INFO     | architecture information:
[2026-05-08 11:48:23] 2026-05-08 15:47:41,809 | INFO     | executing command: cat /etc/os-release
[2026-05-08 11:48:23] 2026-05-08 15:47:41,903 | INFO     | cat /etc/os-release:
[2026-05-08 11:48:23] NAME="CentOS Linux"
[2026-05-08 11:48:23] VERSION="7 (Core)"
[2026-05-08 11:48:23] ID="centos"
[2026-05-08 11:48:23] ID_LIKE="rhel fedora"
[2026-05-08 11:48:23] VERSION_ID="7"
[2026-05-08 11:48:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-08 11:48:23] ANSI_COLOR="0;31"
[2026-05-08 11:48:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-08 11:48:23] HOME_URL="https://www.centos.org/"
[2026-05-08 11:48:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-08 11:48:23] 
[2026-05-08 11:48:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-08 11:48:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-08 11:48:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-08 11:48:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-08 11:48:23] 
[2026-05-08 11:48:23] 2026-05-08 15:47:41,904 | INFO     | ***************************************
[2026-05-08 11:48:23] 2026-05-08 15:47:42,408 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-08 11:48:23] 2026-05-08 15:47:42,479 | INFO     | sufficient remaining disk space (65627226112 B)
[2026-05-08 11:48:23] 2026-05-08 15:47:42,479 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-08 11:48:23] 2026-05-08 15:47:42,479 | INFO     | current server update state: UPDATING_FINAL
[2026-05-08 11:48:23] 2026-05-08 15:47:42,480 | INFO     | update_server=False
[2026-05-08 11:48:23] 2026-05-08 15:47:42,480 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-08 11:48:23] 2026-05-08 15:47:42,576 | INFO     | all payload control threads have been joined
[2026-05-08 11:48:23] 2026-05-08 15:47:42,792 | INFO     | all job control threads have been joined
[2026-05-08 11:48:23] 2026-05-08 15:47:43,324 | INFO     | all data control threads have been joined
[2026-05-08 11:48:23] 2026-05-08 15:47:43,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-08 11:48:23] 2026-05-08 15:47:43,363 | INFO     | aborting loop
[2026-05-08 11:48:23] 2026-05-08 15:47:43,488 | INFO     | [job] retrieve thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:43,583 | INFO     | [payload] control thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:43,594 | INFO     | [job] validate thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:43,595 | INFO     | [payload] validate_pre thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:43,679 | INFO     | [job] create_data_payload thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:43,799 | INFO     | [job] control thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:43,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-08 11:48:23] 2026-05-08 15:47:43,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-08 11:48:23] 2026-05-08 15:47:44,054 | INFO     | [payload] execute_payloads thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:44,259 | INFO     | [payload] failed_post thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:44,331 | INFO     | [data] control thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:44,369 | INFO     | [job] job monitor thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:44,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-08 11:48:23] 2026-05-08 15:47:44,575 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:44,742 | INFO     | [data] copytool_in thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:44,858 | INFO     | [payload] validate_post thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:44,997 | INFO     | [job] queue monitor thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:45,830 | INFO     | [data] copytool_out thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:47:48,580 | INFO     | [data] queue_monitor thread has finished
[2026-05-08 11:48:23] 2026-05-08 15:48:14,377 | INFO     | PID=2875549 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-08 11:48:23] 2026-05-08 15:48:14,377 | INFO     | .. there are 19 such processes running
[2026-05-08 11:48:23] 2026-05-08 15:48:14,377 | INFO     | found 0 job(s) in 20 queues
[2026-05-08 11:48:23] 2026-05-08 15:48:14,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-08 11:48:23] 2026-05-08 15:48:14,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-08 11:48:23] 2026-05-08 15:48:15,797 | INFO     | [monitor] cgroup control has ended
[2026-05-08 11:48:23] 2026-05-08 15:48:16,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673482020672)>', '<ExcThread(monitor, started 139673099806464)>']
[2026-05-08 11:48:23] 2026-05-08 15:48:17,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-08 11:48:23] 2026-05-08 15:48:17,397 | INFO     | [monitor] control thread has ended
[2026-05-08 11:48:23] 2026-05-08 15:48:21,598 | INFO     | all workflow threads have been joined
[2026-05-08 11:48:23] 2026-05-08 15:48:21,599 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-08 11:48:23] 2026-05-08 15:48:21,599 | INFO     | traces error code: 0
[2026-05-08 11:48:23] 2026-05-08 15:48:21,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-08 11:48:23] 2026-05-08 15:48:22,394 [wrapper] ==== pilot stdout END ====
[2026-05-08 11:48:23] 2026-05-08 15:48:22,411 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-08 11:48:23] 2026-05-08 15:48:22,445 [wrapper] pilotpid: 2875549
[2026-05-08 11:48:23] 2026-05-08 15:48:22,460 [wrapper] Pilot exit status: 0
[2026-05-08 11:48:23] 2026-05-08 15:48:22,547 [wrapper] pandaids: 7116245388
[2026-05-08 11:48:23] 2026-05-08 15:48:22,700 [wrapper] cleanup supervisor_pilot 3295377 2875550
[2026-05-08 11:48:23] 2026-05-08 15:48:22,737 [wrapper] Test setup, not cleaning
[2026-05-08 11:48:23] 2026-05-08 15:48:22,761 [wrapper] apfmon messages muted
[2026-05-08 11:48:23] 2026-05-08 15:48:22,772 [wrapper] ==== wrapper stdout END ====
[2026-05-08 11:48:23] 2026-05-08 15:48:22,788 [wrapper] ==== wrapper stderr END ====
[2026-05-08 11:48:23]  *** Error codes and diagnostics ***
[2026-05-08 11:48:23]     "exeErrorCode": 0,
[2026-05-08 11:48:23]     "pilotErrorCode": 0,
[2026-05-08 11:48:23]  *** Listing of results directory ***
[2026-05-08 11:48:23] total 634512
[2026-05-08 11:48:23] -rwx------. 1 boincer umatlas     36322 Apr 27 19:10 runpilot2-wrapper.sh
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas      5631 Apr 27 21:53 queuedata.json
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas    683926 Apr 27 21:53 pilot3.tar.gz
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas       100 May  8 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-08 11:48:23] -rwxr-xr-x. 1 boincer umatlas      7986 May  8 09:25 run_atlas
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas       105 May  8 09:25 job.xml
[2026-05-08 11:48:23] -rw-r--r--. 2 boincer umatlas 446759990 May  8 09:25 EVNT.46373187._000023.pool.root.1
[2026-05-08 11:48:23] -rw-r--r--. 2 boincer umatlas    697434 May  8 09:25 input.tar.gz
[2026-05-08 11:48:23] -rw-r--r--. 2 boincer umatlas     15667 May  8 09:25 start_atlas.sh
[2026-05-08 11:48:23] drwxrwx--x. 2 boincer umatlas      4096 May  8 09:25 shared
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas         0 May  8 09:25 boinc_lockfile
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas      2595 May  8 09:25 pandaJob.out
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas        57 May  8 09:25 setup.sh.local
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas    994523 May  8 09:25 agis_schedconf.cvmfs.json
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas   1502997 May  8 09:25 agis_ddmendpoints.agis.ALL.json
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas       443 May  8 09:26 workernode_map.json
[2026-05-08 11:48:23] drwx------. 5 boincer umatlas      4096 May  8 09:26 pilot3
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas      6770 May  8 11:36 init_data.xml
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas 196516331 May  8 11:45 HITS.49718416._012187.pool.root.1
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas       489 May  8 11:46 boinc_task_state.xml
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas        95 May  8 11:47 pilot_heartbeat.json
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas      1066 May  8 11:47 memory_monitor_summary.json
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas    405239 May  8 11:47 log.49718416._012187.job.log.tgz.1
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas      6441 May  8 11:47 heartbeat_new.json
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas      6332 May  8 11:47 heartbeat.json
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas      4823 May  8 11:48 pilotlog.txt
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas    765043 May  8 11:48 log.49718416._012187.job.log.1
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas      8192 May  8 11:48 boinc_mmap_file
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas       357 May  8 11:48 output.list
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas        27 May  8 11:48 wrapper_checkpoint.txt
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas       410 May  8 11:48 runtime_log
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas   1187840 May  8 11:48 result.tar.gz
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas      8971 May  8 11:48 runtime_log.err
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas       659 May  8 11:48 ecef0d67c8ce.diag
[2026-05-08 11:48:23] -rw-r--r--. 1 boincer umatlas     21143 May  8 11:48 stderr.txt
[2026-05-08 11:48:23] HITS file was successfully produced:
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas 196516331 May  8 11:45 shared/HITS.pool.root.1
[2026-05-08 11:48:23]  *** Contents of shared directory: ***
[2026-05-08 11:48:23] total 630072
[2026-05-08 11:48:23] -rw-r--r--. 2 boincer umatlas 446759990 May  8 09:25 ATLAS.root_0
[2026-05-08 11:48:23] -rw-r--r--. 2 boincer umatlas    697434 May  8 09:25 input.tar.gz
[2026-05-08 11:48:23] -rw-r--r--. 2 boincer umatlas     15667 May  8 09:25 start_atlas.sh
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas 196516331 May  8 11:45 HITS.pool.root.1
[2026-05-08 11:48:23] -rw-------. 1 boincer umatlas   1187840 May  8 11:48 result.tar.gz
11:48:25 (2871439): run_atlas exited; CPU time 43891.359473
11:48:25 (2871439): called boinc_finish(0)

</stderr_txt>
]]>

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