Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:22:36 (844965): wrapper (7.7.26015): starting
09:22:36 (844965): wrapper: running run_atlas (--nthreads 12)
[2026-05-09 09:22:36] Arguments: --nthreads 12
[2026-05-09 09:22:36] Threads: 12
[2026-05-09 09:22:36] Checking for CVMFS
[2026-05-09 09:22:36] No cvmfs_config command found, will try listing directly
[2026-05-09 09:22:36] CVMFS is ok
[2026-05-09 09:22:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-09 09:22:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-09 09:22:36] Further information can be found at the LHC@home message board.
[2026-05-09 09:22:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-09 09:22:36] Checking for apptainer binary...
[2026-05-09 09:22:36] which: no apptainer in ((null))
[2026-05-09 09:22:36] apptainer is not installed, using version from CVMFS
[2026-05-09 09:22:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-09 09:22:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-05-09 09:22:36] apptainer works
[2026-05-09 09:22:36] Set ATHENA_PROC_NUMBER=12
[2026-05-09 09:22:36] Set ATHENA_CORE_NUMBER=12
[2026-05-09 09:22:36] Starting ATLAS job with PandaID=7116217309
[2026-05-09 09:22:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-09 10:11:18]  *** The last 200 lines of the pilot log: ***
[2026-05-09 10:11:18]  filesize=494000
[2026-05-09 10:11:18]  filetype=log
[2026-05-09 10:11:18]  guid=319d14b2-4f64-4571-b12d-7b7b1b916db2
[2026-05-09 10:11:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-09 10:11:18]  is_altstaged=None
[2026-05-09 10:11:18]  is_tar=False
[2026-05-09 10:11:18]  lfn=log.49820244._019508.job.log.tgz.1
[2026-05-09 10:11:18]  mtime=0
[2026-05-09 10:11:18]  protocol_id=None
[2026-05-09 10:11:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-09 10:11:18]  replicas=None
[2026-05-09 10:11:18]  scope=mc23_13p6TeV
[2026-05-09 10:11:18]  status=None
[2026-05-09 10:11:18]  status_code=0
[2026-05-09 10:11:18]  storage_token=
[2026-05-09 10:11:18]  surl=/var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7116217309/log.49820244._019508.job.log.tgz.1
[2026-05-09 10:11:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/41/log.49820244._019508.job.log.tgz.1
[2026-05-09 10:11:18]  workdir=None
[2026-05-09 10:11:18] ]
[2026-05-09 10:11:18] 2026-05-09 08:10:39,940 | INFO     | transferring file log.49820244._019508.job.log.tgz.1 from /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7116217309/log.49820244._019508.job.log.tgz.1 to /var/lib/
[2026-05-09 10:11:18] 2026-05-09 08:10:39,940 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7116217309/log.49820244._019508.job.log.tgz.1 /var/lib/boinc/var/slot144/slots/0/
[2026-05-09 10:11:18] 2026-05-09 08:10:39,956 | INFO     | adding to output.list: log.49820244._019508.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/41/log.49820244._019508.job.log.tg
[2026-05-09 10:11:18] 2026-05-09 08:10:39,957 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-09 10:11:18] 2026-05-09 08:10:39,957 | INFO     | summary of transferred files:
[2026-05-09 10:11:18] 2026-05-09 08:10:39,957 | INFO     |  -- lfn=log.49820244._019508.job.log.tgz.1, status_code=0, status=transferred
[2026-05-09 10:11:18] 2026-05-09 08:10:39,957 | INFO     | stage-out finished correctly
[2026-05-09 10:11:18] 2026-05-09 08:10:42,821 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-09 10:11:18] 2026-05-09 08:10:43,668 | WARNING  | process 866988 can no longer be monitored (due to stat problems) - aborting
[2026-05-09 10:11:18] 2026-05-09 08:10:43,668 | INFO     | using path: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7116217309/memory_monitor_summary.json (trf name=prmon)
[2026-05-09 10:11:18] 2026-05-09 08:10:43,949 | INFO     | number of running child processes to parent process 866988: 1
[2026-05-09 10:11:18] 2026-05-09 08:10:43,949 | INFO     | maximum number of monitored processes: 6
[2026-05-09 10:11:18] 2026-05-09 08:10:45,709 | INFO     | job 7116217309 has state=finished
[2026-05-09 10:11:18] 2026-05-09 08:10:45,709 | INFO     | preparing for final server update for job 7116217309 in state='finished'
[2026-05-09 10:11:18] 2026-05-09 08:10:45,709 | INFO     | reading metadata from: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7116217309/jobReport.json
[2026-05-09 10:11:18] 2026-05-09 08:10:45,711 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot144/slots/0/workernode_map.json
[2026-05-09 10:11:18] 2026-05-09 08:10:45,711 | INFO     | this job has now completed (state=finished)
[2026-05-09 10:11:18] 2026-05-09 08:10:45,711 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-09 10:11:18] 2026-05-09 08:10:45,711 | INFO     | log transfer has been attempted: DONE
[2026-05-09 10:11:18] 2026-05-09 08:10:45,711 | INFO     | job 7116217309 has finished - writing final server update
[2026-05-09 10:11:18] 2026-05-09 08:10:45,711 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3937493/.job.ad'
[2026-05-09 10:11:18] 2026-05-09 08:10:45,711 | INFO     | total number of processed events: 400 (read)
[2026-05-09 10:11:18] 2026-05-09 08:10:45,729 | INFO     | using path: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7116217309/memory_monitor_summary.json (trf name=prmon)
[2026-05-09 10:11:18] 2026-05-09 08:10:45,729 | INFO     | extracted standard info from prmon json
[2026-05-09 10:11:18] 2026-05-09 08:10:45,729 | INFO     | extracted standard memory fields from prmon json
[2026-05-09 10:11:18] 2026-05-09 08:10:45,729 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-09 10:11:18] 2026-05-09 08:10:45,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-09 10:11:18] 2026-05-09 08:10:45,730 | INFO     | fitting pss+swap vs Time
[2026-05-09 10:11:18] 2026-05-09 08:10:45,730 | INFO     | sum of square deviations: 19832930.0
[2026-05-09 10:11:18] 2026-05-09 08:10:45,730 | INFO     | sum of deviations: 229838758.5
[2026-05-09 10:11:18] 2026-05-09 08:10:45,730 | INFO     | mean x (centered): 0.0
[2026-05-09 10:11:18] 2026-05-09 08:10:45,730 | INFO     | mean y: 2784941.875
[2026-05-09 10:11:18] 2026-05-09 08:10:45,730 | INFO     | intersect: 2784941.875
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | chi2: 0.00010814858160614159
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | current memory leak: 11.59 B/s (using 40 data points, chi2=0.00)
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | could have reported an average CPU frequency of 3643 MHz (5 samples)
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | ..............................
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | . Timing measurements:
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | . get job = 0 s
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | . initial setup = 4 s
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | . payload setup = 6 s
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | . stage-in = 0 s
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | . payload execution = 2850 s
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | . stage-out = 0 s
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | . log creation = 0 s
[2026-05-09 10:11:18] 2026-05-09 08:10:45,731 | INFO     | ..............................
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | 
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | job summary report
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | --------------------------------------------------
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | PanDA job id: 7116217309
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | task id: 49820244
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | errors: (none)
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | pilot state: finished 
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | transexitcode: 0
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | exeerrorcode: 0
[2026-05-09 10:11:18] 2026-05-09 08:10:45,776 | INFO     | exeerrordiag: 
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | exitcode: 0
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | exitmsg: OK
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | cpuconsumptiontime: 31186 s
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | nevents: 400
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | neventsw: 0
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | pid: 866988
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | pgrp: 866988
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | corecount: 12
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | event service: False
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | sizes: {0: 2267945, 10: 2267945, 2861: 2293350, 2862: 2302372, 2865: 2302428, 2867: 2302654}
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | --------------------------------------------------
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | 
[2026-05-09 10:11:18] 2026-05-09 08:10:45,777 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/0
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,794 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | job 7116217309 has completed (purged errors)
[2026-05-09 10:11:18] 2026-05-09 08:10:45,795 | INFO     | overall cleanup function is called
[2026-05-09 10:11:18] 2026-05-09 08:10:46,804 | INFO     | --- collectZombieJob: --- 10, [866988]
[2026-05-09 10:11:18] 2026-05-09 08:10:46,804 | INFO     | zombie collector waiting for pid 866988
[2026-05-09 10:11:18] 2026-05-09 08:10:46,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-09 10:11:18] 2026-05-09 08:10:46,804 | INFO     | collected zombie processes
[2026-05-09 10:11:18] 2026-05-09 08:10:46,804 | INFO     | will attempt to kill all subprocesses of pid=866988
[2026-05-09 10:11:18] 2026-05-09 08:10:47,072 | INFO     | process IDs to be killed: [866988] (in reverse order)
[2026-05-09 10:11:18] 2026-05-09 08:10:47,205 | WARNING  | found no corresponding commands to process id(s)
[2026-05-09 10:11:18] 2026-05-09 08:10:47,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-09 10:11:18] 2026-05-09 08:10:47,225 | INFO     | did not find any defunct processes belonging to 866988
[2026-05-09 10:11:18] 2026-05-09 08:10:47,242 | INFO     | did not find any defunct processes belonging to 866988
[2026-05-09 10:11:18] 2026-05-09 08:10:47,242 | INFO     | Ready for new job
[2026-05-09 10:11:18] 2026-05-09 08:10:47,243 | INFO     | ***************************************
[2026-05-09 10:11:18] 2026-05-09 08:10:47,243 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-09 10:11:18] 2026-05-09 08:10:47,243 | INFO     | ***************************************
[2026-05-09 10:11:18] 2026-05-09 08:10:47,243 | INFO     | 
[2026-05-09 10:11:18] 2026-05-09 08:10:47,248 | INFO     | architecture information:
[2026-05-09 10:11:18] 2026-05-09 08:10:47,248 | INFO     | executing command: cat /etc/os-release
[2026-05-09 10:11:18] 2026-05-09 08:10:47,264 | INFO     | cat /etc/os-release:
[2026-05-09 10:11:18] NAME="CentOS Linux"
[2026-05-09 10:11:18] VERSION="7 (Core)"
[2026-05-09 10:11:18] ID="centos"
[2026-05-09 10:11:18] ID_LIKE="rhel fedora"
[2026-05-09 10:11:18] VERSION_ID="7"
[2026-05-09 10:11:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-09 10:11:18] ANSI_COLOR="0;31"
[2026-05-09 10:11:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-09 10:11:18] HOME_URL="https://www.centos.org/"
[2026-05-09 10:11:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-09 10:11:18] 
[2026-05-09 10:11:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-09 10:11:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-09 10:11:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-09 10:11:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-09 10:11:18] 
[2026-05-09 10:11:18] 2026-05-09 08:10:47,264 | INFO     | ***************************************
[2026-05-09 10:11:18] 2026-05-09 08:10:47,767 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/0
[2026-05-09 10:11:18] 2026-05-09 08:10:47,777 | INFO     | sufficient remaining disk space (152020451328 B)
[2026-05-09 10:11:18] 2026-05-09 08:10:47,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-09 10:11:18] 2026-05-09 08:10:47,777 | INFO     | current server update state: UPDATING_FINAL
[2026-05-09 10:11:18] 2026-05-09 08:10:47,777 | INFO     | update_server=False
[2026-05-09 10:11:18] 2026-05-09 08:10:47,777 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-09 10:11:18] 2026-05-09 08:10:47,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-09 10:11:18] 2026-05-09 08:10:47,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-09 10:11:18] 2026-05-09 08:10:47,778 | INFO     | aborting loop
[2026-05-09 10:11:18] 2026-05-09 08:10:47,899 | INFO     | all data control threads have been joined
[2026-05-09 10:11:18] 2026-05-09 08:10:48,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-09 10:11:18] 2026-05-09 08:10:48,373 | INFO     | all payload control threads have been joined
[2026-05-09 10:11:18] 2026-05-09 08:10:48,782 | INFO     | [job] retrieve thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:48,783 | INFO     | [job] job monitor thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:48,784 | INFO     | [job] queue monitor thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:48,864 | INFO     | [payload] execute_payloads thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:48,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-09 10:11:18] 2026-05-09 08:10:48,904 | INFO     | [data] control thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:49,097 | INFO     | [payload] failed_post thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:49,191 | INFO     | all job control threads have been joined
[2026-05-09 10:11:18] 2026-05-09 08:10:49,327 | INFO     | [job] validate thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:49,378 | INFO     | [payload] control thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:49,446 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:49,499 | INFO     | [job] create_data_payload thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:49,512 | INFO     | [payload] validate_pre thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:49,621 | INFO     | [payload] validate_post thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:49,649 | INFO     | [data] copytool_in thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:50,017 | INFO     | [data] copytool_out thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:50,199 | INFO     | [job] control thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:51,714 | INFO     | [monitor] cgroup control has ended
[2026-05-09 10:11:18] 2026-05-09 08:10:52,877 | INFO     | [data] queue_monitor thread has finished
[2026-05-09 10:11:18] 2026-05-09 08:10:54,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22653902976832)>', '<ExcThread(monitor, started 22653601572608)>']
[2026-05-09 10:11:18] 2026-05-09 08:10:59,806 | INFO     | all workflow threads have been joined
[2026-05-09 10:11:18] 2026-05-09 08:10:59,806 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-09 10:11:18] 2026-05-09 08:10:59,806 | INFO     | traces error code: 0
[2026-05-09 10:11:18] 2026-05-09 08:10:59,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-09 10:11:18] 2026-05-09 08:11:18,035 | INFO     | PID=853586 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-09 10:11:18] 2026-05-09 08:11:18,036 | INFO     | .. there are 14 such processes running
[2026-05-09 10:11:18] 2026-05-09 08:11:18,036 | INFO     | found 0 job(s) in 20 queues
[2026-05-09 10:11:18] 2026-05-09 08:11:18,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-09 10:11:18] 2026-05-09 08:11:18,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-09 10:11:18] 2026-05-09 08:11:18,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-09 10:11:18] 2026-05-09 08:11:18,036 | CRITICAL | thread 'MainThread' is not alive
[2026-05-09 10:11:18] 2026-05-09 08:11:18,036 | INFO     | [monitor] control thread has ended
[2026-05-09 10:11:18] 2026-05-09 08:11:18,141 [wrapper] ==== pilot stdout END ====
[2026-05-09 10:11:18] 2026-05-09 08:11:18,143 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-09 10:11:18] 2026-05-09 08:11:18,145 [wrapper] pilotpid: 853586
[2026-05-09 10:11:18] 2026-05-09 08:11:18,146 [wrapper] Pilot exit status: 0
[2026-05-09 10:11:18] 2026-05-09 08:11:18,151 [wrapper] pandaids: 7116217309
[2026-05-09 10:11:18] 2026-05-09 08:11:18,245 [wrapper] cleanup supervisor_pilot 1255490 853588
[2026-05-09 10:11:18] 2026-05-09 08:11:18,247 [wrapper] Test setup, not cleaning
[2026-05-09 10:11:18] 2026-05-09 08:11:18,249 [wrapper] apfmon messages muted
[2026-05-09 10:11:18] 2026-05-09 08:11:18,251 [wrapper] ==== wrapper stdout END ====
[2026-05-09 10:11:18] 2026-05-09 08:11:18,253 [wrapper] ==== wrapper stderr END ====
[2026-05-09 10:11:18]  *** Error codes and diagnostics ***
[2026-05-09 10:11:18]     "exeErrorCode": 0,
[2026-05-09 10:11:18]     "pilotErrorCode": 0,
[2026-05-09 10:11:18]  *** Listing of results directory ***
[2026-05-09 10:11:18] total 2445456
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc     683926 Apr 27 04:13 pilot3.tar.gz
[2026-05-09 10:11:18] -rwx------. 1 boinc boinc      36322 Apr 27 04:44 runpilot2-wrapper.sh
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc       5631 Apr 27 04:45 queuedata.json
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc        100 May  9 09:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-09 10:11:18] -rwxr-xr-x. 1 boinc boinc       7986 May  9 09:22 run_atlas
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc        105 May  9 09:22 job.xml
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc       6631 May  9 09:22 init_data.xml
[2026-05-09 10:11:18] -rw-r--r--. 2 boinc boinc 2226500010 May  9 09:22 EVNT.49820242._000036.pool.root.1
[2026-05-09 10:11:18] -rw-r--r--. 2 boinc boinc      15667 May  9 09:22 start_atlas.sh
[2026-05-09 10:11:18] drwxrwx--x. 2 boinc boinc       4096 May  9 09:22 shared
[2026-05-09 10:11:18] -rw-r--r--. 2 boinc boinc     697414 May  9 09:22 input.tar.gz
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc          0 May  9 09:22 boinc_lockfile
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc       2549 May  9 09:22 pandaJob.out
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc     994235 May  9 09:22 agis_schedconf.cvmfs.json
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc    1502997 May  9 09:22 agis_ddmendpoints.agis.ALL.json
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc        444 May  9 09:22 workernode_map.json
[2026-05-09 10:11:18] drwx------. 5 boinc boinc       4096 May  9 09:22 pilot3
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc  271920307 May  9 10:10 HITS.49820244._019508.pool.root.1
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc        488 May  9 10:10 boinc_task_state.xml
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc       1030 May  9 10:10 memory_monitor_summary.json
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc     494000 May  9 10:10 log.49820244._019508.job.log.tgz.1
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc         95 May  9 10:10 pilot_heartbeat.json
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc       6377 May  9 10:10 heartbeat_new.json
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc       6268 May  9 10:10 heartbeat.json
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc       8192 May  9 10:11 boinc_mmap_file
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc         27 May  9 10:11 wrapper_checkpoint.txt
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc        892 May  9 10:11 pilotlog.txt
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc     312824 May  9 10:11 log.49820244._019508.job.log.1
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc        357 May  9 10:11 output.list
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc        410 May  9 10:11 runtime_log
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc     819200 May  9 10:11 result.tar.gz
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc       8846 May  9 10:11 runtime_log.err
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc        660 May  9 10:11 cd734ae8b974.diag
[2026-05-09 10:11:18] -rw-r--r--. 1 boinc boinc      21011 May  9 10:11 stderr.txt
[2026-05-09 10:11:18] HITS file was successfully produced:
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc 271920307 May  9 10:10 shared/HITS.pool.root.1
[2026-05-09 10:11:18]  *** Contents of shared directory: ***
[2026-05-09 10:11:18] total 2441376
[2026-05-09 10:11:18] -rw-r--r--. 2 boinc boinc 2226500010 May  9 09:22 ATLAS.root_0
[2026-05-09 10:11:18] -rw-r--r--. 2 boinc boinc      15667 May  9 09:22 start_atlas.sh
[2026-05-09 10:11:18] -rw-r--r--. 2 boinc boinc     697414 May  9 09:22 input.tar.gz
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc  271920307 May  9 10:10 HITS.pool.root.1
[2026-05-09 10:11:18] -rw-------. 1 boinc boinc     819200 May  9 10:11 result.tar.gz
10:11:19 (844965): run_atlas exited; CPU time 31264.914704
10:11:19 (844965): called boinc_finish(0)

</stderr_txt>
]]>

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