Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:54:40 (1693227): wrapper (7.7.26015): starting
22:54:40 (1693227): wrapper: running run_atlas (--nthreads 11)
[2026-05-04 22:54:40] Arguments: --nthreads 11
[2026-05-04 22:54:40] Threads: 11
[2026-05-04 22:54:40] Checking for CVMFS
[2026-05-04 22:54:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 22:54:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 22:54:41] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 22:54:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 22:54:41] 2.13.3.0 17634 6539 205256 159224 0 279 26928883 32935936 24627 16776704 0 38936841 99.613 38831765 29270 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-04 22:54:41] CVMFS is ok
[2026-05-04 22:54:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 22:54:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 22:54:41] Further information can be found at the LHC@home message board.
[2026-05-04 22:54:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 22:54:41] Checking for apptainer binary...
[2026-05-04 22:54:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 22:54:41] Running /usr/bin/apptainer --version
[2026-05-04 22:54:41] apptainer version 1.4.5-3.el9
[2026-05-04 22:54:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 22:54:41] c6-12-27-4.aglt2.org
[2026-05-04 22:54:41] apptainer works
[2026-05-04 22:54:41] Set ATHENA_PROC_NUMBER=11
[2026-05-04 22:54:41] Set ATHENA_CORE_NUMBER=11
[2026-05-04 22:54:41] Starting ATLAS job with PandaID=7114605476
[2026-05-04 22:54:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 06:11:58]  *** The last 200 lines of the pilot log: ***
[2026-05-05 06:11:58] 2026-05-05 10:11:01,012 | INFO     | this job has now completed (state=finished)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,012 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,012 | INFO     | log transfer has been attempted: DONE
[2026-05-05 06:11:58] 2026-05-05 10:11:01,013 | INFO     | job 7114605476 has finished - writing final server update
[2026-05-05 06:11:58] 2026-05-05 10:11:01,013 | INFO     | total number of processed events: 400 (read)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,031 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7114605476/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,032 | INFO     | extracted standard info from prmon json
[2026-05-05 06:11:58] 2026-05-05 10:11:01,032 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 06:11:58] 2026-05-05 10:11:01,033 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 06:11:58] 2026-05-05 10:11:01,033 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 06:11:58] 2026-05-05 10:11:01,041 | INFO     | fitting pss+swap vs Time
[2026-05-05 06:11:58] 2026-05-05 10:11:01,042 | INFO     | sum of square deviations: 24482138109.54306
[2026-05-05 06:11:58] 2026-05-05 10:11:01,047 | INFO     | sum of deviations: 72678079570.69925
[2026-05-05 06:11:58] 2026-05-05 10:11:01,047 | INFO     | mean x (centered): 0.0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,047 | INFO     | mean y: 2655256.972027972
[2026-05-05 06:11:58] 2026-05-05 10:11:01,047 | INFO     | intersect: 2655256.972027972
[2026-05-05 06:11:58] 2026-05-05 10:11:01,048 | INFO     | chi2: 2.270655401889481
[2026-05-05 06:11:58] 2026-05-05 10:11:01,049 | INFO     | sum of square deviations: 23636064754.52581
[2026-05-05 06:11:58] 2026-05-05 10:11:01,054 | INFO     | sum of deviations: 99028233236.67212
[2026-05-05 06:11:58] 2026-05-05 10:11:01,054 | INFO     | mean x (centered): 0.0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,054 | INFO     | mean y: 2659957.0731132077
[2026-05-05 06:11:58] 2026-05-05 10:11:01,055 | INFO     | intersect: 2659957.0731132077
[2026-05-05 06:11:58] 2026-05-05 10:11:01,055 | INFO     | chi2: 1.5783641305632803
[2026-05-05 06:11:58] 2026-05-05 10:11:01,056 | INFO     | current chi2=1.5783641305632803 (change=30.488610061664318 %)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,056 | INFO     | sum of square deviations: 22809712699.50828
[2026-05-05 06:11:58] 2026-05-05 10:11:01,061 | INFO     | sum of deviations: 97094423725.73502
[2026-05-05 06:11:58] 2026-05-05 10:11:01,061 | INFO     | mean x (centered): 0.0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,061 | INFO     | mean y: 2659600.250596659
[2026-05-05 06:11:58] 2026-05-05 10:11:01,061 | INFO     | intersect: 2659600.250596659
[2026-05-05 06:11:58] 2026-05-05 10:11:01,062 | INFO     | chi2: 1.5785723340816205
[2026-05-05 06:11:58] 2026-05-05 10:11:01,062 | INFO     | current chi2=1.5785723340816205 (change=-0.01319109540748773 %)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,062 | INFO     | right removable region: 418
[2026-05-05 06:11:58] 2026-05-05 10:11:01,063 | INFO     | sum of square deviations: 23636049504.525795
[2026-05-05 06:11:58] 2026-05-05 10:11:01,068 | INFO     | sum of deviations: -4046509598.964611
[2026-05-05 06:11:58] 2026-05-05 10:11:01,068 | INFO     | mean x (centered): 0.0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,068 | INFO     | mean y: 2669027.8985849055
[2026-05-05 06:11:58] 2026-05-05 10:11:01,068 | INFO     | intersect: 2669027.8985849055
[2026-05-05 06:11:58] 2026-05-05 10:11:01,069 | INFO     | chi2: 0.7783851536505647
[2026-05-05 06:11:58] 2026-05-05 10:11:01,069 | INFO     | current chi2=0.7783851536505647 (change=65.71980261721585 %)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,070 | INFO     | sum of square deviations: 22809682199.50827
[2026-05-05 06:11:58] 2026-05-05 10:11:01,075 | INFO     | sum of deviations: -18967508267.40096
[2026-05-05 06:11:58] 2026-05-05 10:11:01,075 | INFO     | mean x (centered): 0.0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,075 | INFO     | mean y: 2671768.136038186
[2026-05-05 06:11:58] 2026-05-05 10:11:01,076 | INFO     | intersect: 2671768.136038186
[2026-05-05 06:11:58] 2026-05-05 10:11:01,076 | INFO     | chi2: 0.7150608682669061
[2026-05-05 06:11:58] 2026-05-05 10:11:01,077 | INFO     | current chi2=0.7150608682669061 (change=8.135340851077743 %)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,077 | INFO     | left removable region: 10
[2026-05-05 06:11:58] 2026-05-05 10:11:01,077 | INFO     | sum of square deviations: 21059980586.46813
[2026-05-05 06:11:58] 2026-05-05 10:11:01,082 | INFO     | sum of deviations: 6881497496.259805
[2026-05-05 06:11:58] 2026-05-05 10:11:01,082 | INFO     | mean x (centered): 0.0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,082 | INFO     | mean y: 2676597.2696078434
[2026-05-05 06:11:58] 2026-05-05 10:11:01,082 | INFO     | intersect: 2676597.2696078434
[2026-05-05 06:11:58] 2026-05-05 10:11:01,083 | INFO     | chi2: 0.014030137247505924
[2026-05-05 06:11:58] 2026-05-05 10:11:01,083 | INFO     | current memory leak: 0.33 B/s (using 408 data points, chi2=0.01)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,084 | INFO     | could have reported an average CPU frequency of 2604 MHz (18 samples)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,084 | INFO     | ..............................
[2026-05-05 06:11:58] 2026-05-05 10:11:01,084 | INFO     | . Timing measurements:
[2026-05-05 06:11:58] 2026-05-05 10:11:01,085 | INFO     | . get job = 0 s
[2026-05-05 06:11:58] 2026-05-05 10:11:01,085 | INFO     | . initial setup = 9 s
[2026-05-05 06:11:58] 2026-05-05 10:11:01,085 | INFO     | . payload setup = 14 s
[2026-05-05 06:11:58] 2026-05-05 10:11:01,085 | INFO     | . stage-in = 0 s
[2026-05-05 06:11:58] 2026-05-05 10:11:01,085 | INFO     | . payload execution = 26119 s
[2026-05-05 06:11:58] 2026-05-05 10:11:01,085 | INFO     | . stage-out = 2 s
[2026-05-05 06:11:58] 2026-05-05 10:11:01,085 | INFO     | . log creation = 0 s
[2026-05-05 06:11:58] 2026-05-05 10:11:01,085 | INFO     | ..............................
[2026-05-05 06:11:58] 2026-05-05 10:11:01,197 | INFO     | 
[2026-05-05 06:11:58] 2026-05-05 10:11:01,198 | INFO     | job summary report
[2026-05-05 06:11:58] 2026-05-05 10:11:01,198 | INFO     | --------------------------------------------------
[2026-05-05 06:11:58] 2026-05-05 10:11:01,198 | INFO     | PanDA job id: 7114605476
[2026-05-05 06:11:58] 2026-05-05 10:11:01,198 | INFO     | task id: 49176370
[2026-05-05 06:11:58] 2026-05-05 10:11:01,198 | INFO     | errors: (none)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,198 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 06:11:58] 2026-05-05 10:11:01,198 | INFO     | pilot state: finished 
[2026-05-05 06:11:58] 2026-05-05 10:11:01,198 | INFO     | transexitcode: 0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,198 | INFO     | exeerrorcode: 0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | exeerrordiag: 
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | exitcode: 0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | exitmsg: OK
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | cpuconsumptiontime: 98542 s
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | nevents: 400
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | neventsw: 0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | pid: 1702280
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | pgrp: 1702280
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | corecount: 11
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | event service: False
[2026-05-05 06:11:58] 2026-05-05 10:11:01,199 | INFO     | sizes: {0: 2245016, 1: 2272264, 11: 2272292, 26137: 2308911, 26140: 2317909, 26142: 2317965, 26143: 2318287}
[2026-05-05 06:11:58] 2026-05-05 10:11:01,200 | INFO     | --------------------------------------------------
[2026-05-05 06:11:58] 2026-05-05 10:11:01,200 | INFO     | 
[2026-05-05 06:11:58] 2026-05-05 10:11:01,200 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-05 06:11:58] 2026-05-05 10:11:01,222 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,222 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,223 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,223 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,223 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,223 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,226 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,226 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,226 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,226 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,227 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,227 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 06:11:58] 2026-05-05 10:11:01,227 | INFO     | job 7114605476 has completed (purged errors)
[2026-05-05 06:11:58] 2026-05-05 10:11:01,228 | INFO     | overall cleanup function is called
[2026-05-05 06:11:58] 2026-05-05 10:11:02,236 | INFO     | --- collectZombieJob: --- 10, [1702280]
[2026-05-05 06:11:58] 2026-05-05 10:11:02,236 | INFO     | zombie collector waiting for pid 1702280
[2026-05-05 06:11:58] 2026-05-05 10:11:02,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 06:11:58] 2026-05-05 10:11:02,237 | INFO     | collected zombie processes
[2026-05-05 06:11:58] 2026-05-05 10:11:02,237 | INFO     | will attempt to kill all subprocesses of pid=1702280
[2026-05-05 06:11:58] 2026-05-05 10:11:02,913 | INFO     | PID=1696939 has CPU usage=16.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-05 06:11:58] 2026-05-05 10:11:02,913 | INFO     | .. there are 17 such processes running
[2026-05-05 06:11:58] 2026-05-05 10:11:02,950 | INFO     | process IDs to be killed: [1702280] (in reverse order)
[2026-05-05 06:11:58] 2026-05-05 10:11:03,076 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 06:11:58] 2026-05-05 10:11:03,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 06:11:58] 2026-05-05 10:11:03,093 | INFO     | did not find any defunct processes belonging to 1702280
[2026-05-05 06:11:58] 2026-05-05 10:11:03,109 | INFO     | did not find any defunct processes belonging to 1702280
[2026-05-05 06:11:58] 2026-05-05 10:11:03,109 | INFO     | Ready for new job
[2026-05-05 06:11:58] 2026-05-05 10:11:03,111 | INFO     | ***************************************
[2026-05-05 06:11:58] 2026-05-05 10:11:03,112 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 06:11:58] 2026-05-05 10:11:03,112 | INFO     | ***************************************
[2026-05-05 06:11:58] 2026-05-05 10:11:03,112 | INFO     | 
[2026-05-05 06:11:58] 2026-05-05 10:11:03,117 | INFO     | architecture information:
[2026-05-05 06:11:58] 2026-05-05 10:11:03,118 | INFO     | executing command: cat /etc/os-release
[2026-05-05 06:11:58] 2026-05-05 10:11:03,134 | INFO     | cat /etc/os-release:
[2026-05-05 06:11:58] NAME="CentOS Linux"
[2026-05-05 06:11:58] VERSION="7 (Core)"
[2026-05-05 06:11:58] ID="centos"
[2026-05-05 06:11:58] ID_LIKE="rhel fedora"
[2026-05-05 06:11:58] VERSION_ID="7"
[2026-05-05 06:11:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 06:11:58] ANSI_COLOR="0;31"
[2026-05-05 06:11:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 06:11:58] HOME_URL="https://www.centos.org/"
[2026-05-05 06:11:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 06:11:58] 
[2026-05-05 06:11:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 06:11:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 06:11:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 06:11:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 06:11:58] 
[2026-05-05 06:11:58] 2026-05-05 10:11:03,134 | INFO     | ***************************************
[2026-05-05 06:11:58] 2026-05-05 10:11:03,636 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-05 06:11:58] 2026-05-05 10:11:03,660 | INFO     | sufficient remaining disk space (90981793792 B)
[2026-05-05 06:11:58] 2026-05-05 10:11:03,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 06:11:58] 2026-05-05 10:11:03,661 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 06:11:58] 2026-05-05 10:11:03,661 | INFO     | update_server=False
[2026-05-05 06:11:58] 2026-05-05 10:11:03,661 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 06:11:58] 2026-05-05 10:11:03,661 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-05 06:11:58] 2026-05-05 10:11:03,662 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 06:11:58] 2026-05-05 10:11:03,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 06:11:58] 2026-05-05 10:11:03,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 06:11:58] 2026-05-05 10:11:03,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 06:11:58] 2026-05-05 10:11:04,117 | INFO     | all payload control threads have been joined
[2026-05-05 06:11:58] 2026-05-05 10:11:04,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 06:11:58] 2026-05-05 10:11:04,318 | INFO     | aborting loop
[2026-05-05 06:11:58] 2026-05-05 10:11:04,548 | INFO     | all data control threads have been joined
[2026-05-05 06:11:58] 2026-05-05 10:11:04,647 | INFO     | all job control threads have been joined
[2026-05-05 06:11:58] 2026-05-05 10:11:04,666 | INFO     | [job] retrieve thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,055 | INFO     | [payload] validate_post thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,086 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,122 | INFO     | [payload] control thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,139 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,151 | INFO     | [data] copytool_in thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,323 | INFO     | [job] job monitor thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,331 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,333 | INFO     | [job] validate thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,553 | INFO     | [data] control thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,652 | INFO     | [job] control thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:05,758 | INFO     | [data] copytool_out thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:06,015 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:06,104 | INFO     | [payload] failed_post thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:06,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 06:11:58] 2026-05-05 10:11:06,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 06:11:58] 2026-05-05 10:11:07,212 | INFO     | [job] queue monitor thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:10,941 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 06:11:58] 2026-05-05 10:11:51,417 | INFO     | [monitor] cgroup control has ended
[2026-05-05 06:11:58] 2026-05-05 10:11:52,524 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453047576384)>', '<ExcThread(monitor, started 140452695086848)>']
[2026-05-05 06:11:58] 2026-05-05 10:11:52,891 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 06:11:58] 2026-05-05 10:11:52,891 | INFO     | [monitor] control thread has ended
[2026-05-05 06:11:58] 2026-05-05 10:11:57,542 | INFO     | all workflow threads have been joined
[2026-05-05 06:11:58] 2026-05-05 10:11:57,542 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 06:11:58] 2026-05-05 10:11:57,542 | INFO     | traces error code: 0
[2026-05-05 06:11:58] 2026-05-05 10:11:57,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 06:11:58] 2026-05-05 10:11:57,773 [wrapper] ==== pilot stdout END ====
[2026-05-05 06:11:58] 2026-05-05 10:11:57,778 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 06:11:58] 2026-05-05 10:11:57,782 [wrapper] pilotpid: 1696939
[2026-05-05 06:11:58] 2026-05-05 10:11:57,786 [wrapper] Pilot exit status: 0
[2026-05-05 06:11:58] 2026-05-05 10:11:57,799 [wrapper] pandaids: 7114605476
[2026-05-05 06:11:58] 2026-05-05 10:11:57,915 [wrapper] cleanup supervisor_pilot 3014956 1696940
[2026-05-05 06:11:58] 2026-05-05 10:11:57,919 [wrapper] Test setup, not cleaning
[2026-05-05 06:11:58] 2026-05-05 10:11:57,923 [wrapper] apfmon messages muted
[2026-05-05 06:11:58] 2026-05-05 10:11:57,926 [wrapper] ==== wrapper stdout END ====
[2026-05-05 06:11:58] 2026-05-05 10:11:57,929 [wrapper] ==== wrapper stderr END ====
[2026-05-05 06:11:58]  *** Error codes and diagnostics ***
[2026-05-05 06:11:58]     "exeErrorCode": 0,
[2026-05-05 06:11:58]     "pilotErrorCode": 0,
[2026-05-05 06:11:58]  *** Listing of results directory ***
[2026-05-05 06:11:58] total 456364
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas    683926 Apr 26 18:33 pilot3.tar.gz
[2026-05-05 06:11:58] -rwx------. 1 boincer umatlas     36322 Apr 26 18:41 runpilot2-wrapper.sh
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas      5631 Apr 26 18:45 queuedata.json
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas       100 May  4 22:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 06:11:58] -rwxr-xr-x. 1 boincer umatlas      7986 May  4 22:54 run_atlas
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas       105 May  4 22:54 job.xml
[2026-05-05 06:11:58] -rw-r--r--. 2 boincer umatlas 238750529 May  4 22:54 EVNT.49133711._000006.pool.root.1
[2026-05-05 06:11:58] -rw-r--r--. 2 boincer umatlas     15667 May  4 22:54 start_atlas.sh
[2026-05-05 06:11:58] drwxrwx--x. 2 boincer umatlas      4096 May  4 22:54 shared
[2026-05-05 06:11:58] -rw-r--r--. 2 boincer umatlas    697431 May  4 22:54 input.tar.gz
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas         0 May  4 22:54 boinc_lockfile
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas      2613 May  4 22:54 pandaJob.out
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas        57 May  4 22:54 setup.sh.local
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas   1002597 May  4 22:54 agis_schedconf.cvmfs.json
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas       443 May  4 22:55 workernode_map.json
[2026-05-05 06:11:58] drwx------. 5 boincer umatlas      4096 May  4 22:55 pilot3
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas      6777 May  5 06:10 init_data.xml
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas 218743477 May  5 06:10 HITS.49176370._000630.pool.root.1
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas        95 May  5 06:10 pilot_heartbeat.json
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas       489 May  5 06:10 boinc_task_state.xml
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas      1051 May  5 06:10 memory_monitor_summary.json
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas   1505918 May  5 06:10 agis_ddmendpoints.agis.ALL.json
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas    555963 May  5 06:10 log.49176370._000630.job.log.tgz.1
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas      6428 May  5 06:11 heartbeat_new.json
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas      6319 May  5 06:11 heartbeat.json
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas        29 May  5 06:11 wrapper_checkpoint.txt
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas      8192 May  5 06:11 boinc_mmap_file
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas      4551 May  5 06:11 pilotlog.txt
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas   2287831 May  5 06:11 log.49176370._000630.job.log.1
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas       357 May  5 06:11 output.list
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas       410 May  5 06:11 runtime_log
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas   2856960 May  5 06:11 result.tar.gz
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas      8977 May  5 06:11 runtime_log.err
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas       662 May  5 06:11 9498ca075012.diag
[2026-05-05 06:11:58] -rw-r--r--. 1 boincer umatlas     21065 May  5 06:11 stderr.txt
[2026-05-05 06:11:58] HITS file was successfully produced:
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas 218743477 May  5 06:10 shared/HITS.pool.root.1
[2026-05-05 06:11:58]  *** Contents of shared directory: ***
[2026-05-05 06:11:58] total 450276
[2026-05-05 06:11:58] -rw-r--r--. 2 boincer umatlas 238750529 May  4 22:54 ATLAS.root_0
[2026-05-05 06:11:58] -rw-r--r--. 2 boincer umatlas     15667 May  4 22:54 start_atlas.sh
[2026-05-05 06:11:58] -rw-r--r--. 2 boincer umatlas    697431 May  4 22:54 input.tar.gz
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas 218743477 May  5 06:10 HITS.pool.root.1
[2026-05-05 06:11:58] -rw-------. 1 boincer umatlas   2856960 May  5 06:11 result.tar.gz
06:12:00 (1693227): run_atlas exited; CPU time 99677.584579
06:12:00 (1693227): called boinc_finish(0)

</stderr_txt>
]]>

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