Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:41:28 (11322): wrapper (7.7.26015): starting
07:41:28 (11322): wrapper: running run_atlas (--nthreads 4)
[2026-05-05 07:41:28] Arguments: --nthreads 4
[2026-05-05 07:41:28] Threads: 4
[2026-05-05 07:41:28] Checking for CVMFS
[2026-05-05 07:41:28] No cvmfs_config command found, will try listing directly
[2026-05-05 07:41:28] CVMFS is ok
[2026-05-05 07:41:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-05 07:41:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-05 07:41:28] Further information can be found at the LHC@home message board.
[2026-05-05 07:41:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-05 07:41:28] Checking for apptainer binary...
[2026-05-05 07:41:28] which: no apptainer in ((null))
[2026-05-05 07:41:28] apptainer is not installed, using version from CVMFS
[2026-05-05 07:41:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-05 07:41:28] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-05-05 07:41:28] apptainer works
[2026-05-05 07:41:28] Set ATHENA_PROC_NUMBER=4
[2026-05-05 07:41:28] Set ATHENA_CORE_NUMBER=4
[2026-05-05 07:41:28] Starting ATLAS job with PandaID=7116198602
[2026-05-05 07:41:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 11:28:37]  *** The last 200 lines of the pilot log: ***
[2026-05-05 11:28:37] 2026-05-05 09:23:15,131 | INFO     | this job has now completed (state=finished)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,131 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,131 | INFO     | log transfer has been attempted: DONE
[2026-05-05 11:28:37] 2026-05-05 09:23:15,131 | INFO     | job 7116198602 has finished - writing final server update
[2026-05-05 11:28:37] 2026-05-05 09:23:15,132 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2298900/.job.ad'
[2026-05-05 11:28:37] 2026-05-05 09:23:15,132 | INFO     | total number of processed events: 400 (read)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,144 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/PanDA_Pilot-7116198602/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,145 | INFO     | extracted standard info from prmon json
[2026-05-05 11:28:37] 2026-05-05 09:23:15,145 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 11:28:37] 2026-05-05 09:23:15,145 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 11:28:37] 2026-05-05 09:23:15,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 11:28:37] 2026-05-05 09:23:15,149 | INFO     | fitting pss+swap vs Time
[2026-05-05 11:28:37] 2026-05-05 09:23:15,150 | INFO     | sum of square deviations: 3212467674.5
[2026-05-05 11:28:37] 2026-05-05 09:23:15,151 | INFO     | sum of deviations: 19075999605.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,151 | INFO     | mean x (centered): 0.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,151 | INFO     | mean y: 2358752.7064220184
[2026-05-05 11:28:37] 2026-05-05 09:23:15,151 | INFO     | intersect: 2358752.7064220184
[2026-05-05 11:28:37] 2026-05-05 09:23:15,152 | INFO     | chi2: 2.0113322765897474
[2026-05-05 11:28:37] 2026-05-05 09:23:15,152 | INFO     | sum of square deviations: 2996454322.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,153 | INFO     | sum of deviations: 31159412196.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,154 | INFO     | mean x (centered): 0.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,154 | INFO     | mean y: 2367115.8262910796
[2026-05-05 11:28:37] 2026-05-05 09:23:15,154 | INFO     | intersect: 2367115.8262910796
[2026-05-05 11:28:37] 2026-05-05 09:23:15,154 | INFO     | chi2: 1.3475196133136222
[2026-05-05 11:28:37] 2026-05-05 09:23:15,154 | INFO     | current chi2=1.3475196133136222 (change=33.00363003181316 %)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,154 | INFO     | sum of square deviations: 2790348132.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,156 | INFO     | sum of deviations: 30262267628.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,156 | INFO     | mean x (centered): 0.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,156 | INFO     | mean y: 2366451.903846154
[2026-05-05 11:28:37] 2026-05-05 09:23:15,156 | INFO     | intersect: 2366451.903846154
[2026-05-05 11:28:37] 2026-05-05 09:23:15,156 | INFO     | chi2: 1.348147276612061
[2026-05-05 11:28:37] 2026-05-05 09:23:15,156 | INFO     | current chi2=1.348147276612061 (change=-0.046579158643584924 %)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,157 | INFO     | right removable region: 207
[2026-05-05 11:28:37] 2026-05-05 09:23:15,157 | INFO     | sum of square deviations: 2996454322.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,158 | INFO     | sum of deviations: -10555478064.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,158 | INFO     | mean x (centered): 0.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,158 | INFO     | mean y: 2379442.4225352113
[2026-05-05 11:28:37] 2026-05-05 09:23:15,158 | INFO     | intersect: 2379442.4225352113
[2026-05-05 11:28:37] 2026-05-05 09:23:15,159 | INFO     | chi2: 0.6923755882809564
[2026-05-05 11:28:37] 2026-05-05 09:23:15,159 | INFO     | current chi2=0.6923755882809564 (change=65.57627019962646 %)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,159 | INFO     | sum of square deviations: 2790348132.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,161 | INFO     | sum of deviations: -11121033494.5
[2026-05-05 11:28:37] 2026-05-05 09:23:15,161 | INFO     | mean x (centered): 0.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,161 | INFO     | mean y: 2379841.3701923075
[2026-05-05 11:28:37] 2026-05-05 09:23:15,161 | INFO     | intersect: 2379841.3701923075
[2026-05-05 11:28:37] 2026-05-05 09:23:15,161 | INFO     | chi2: 0.6880870007294004
[2026-05-05 11:28:37] 2026-05-05 09:23:15,161 | INFO     | current chi2=0.6880870007294004 (change=0.6194019003766021 %)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,161 | INFO     | left removable region: 10
[2026-05-05 11:28:37] 2026-05-05 09:23:15,162 | INFO     | sum of square deviations: 2370641658.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,163 | INFO     | sum of deviations: 879693444.0000005
[2026-05-05 11:28:37] 2026-05-05 09:23:15,163 | INFO     | mean x (centered): 0.0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,163 | INFO     | mean y: 2388965.106598985
[2026-05-05 11:28:37] 2026-05-05 09:23:15,163 | INFO     | intersect: 2388965.106598985
[2026-05-05 11:28:37] 2026-05-05 09:23:15,163 | INFO     | chi2: 0.009716846198365249
[2026-05-05 11:28:37] 2026-05-05 09:23:15,164 | INFO     | current memory leak: 0.37 B/s (using 197 data points, chi2=0.01)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,164 | INFO     | could have reported an average CPU frequency of 2737 MHz (11 samples)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,164 | INFO     | ..............................
[2026-05-05 11:28:37] 2026-05-05 09:23:15,164 | INFO     | . Timing measurements:
[2026-05-05 11:28:37] 2026-05-05 09:23:15,165 | INFO     | . get job = 0 s
[2026-05-05 11:28:37] 2026-05-05 09:23:15,165 | INFO     | . initial setup = 5 s
[2026-05-05 11:28:37] 2026-05-05 09:23:15,165 | INFO     | . payload setup = 9 s
[2026-05-05 11:28:37] 2026-05-05 09:23:15,165 | INFO     | . stage-in = 0 s
[2026-05-05 11:28:37] 2026-05-05 09:23:15,165 | INFO     | . payload execution = 13263 s
[2026-05-05 11:28:37] 2026-05-05 09:23:15,165 | INFO     | . stage-out = 1 s
[2026-05-05 11:28:37] 2026-05-05 09:23:15,165 | INFO     | . log creation = 0 s
[2026-05-05 11:28:37] 2026-05-05 09:23:15,165 | INFO     | ..............................
[2026-05-05 11:28:37] 2026-05-05 09:23:15,253 | INFO     | 
[2026-05-05 11:28:37] 2026-05-05 09:23:15,253 | INFO     | job summary report
[2026-05-05 11:28:37] 2026-05-05 09:23:15,253 | INFO     | --------------------------------------------------
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | PanDA job id: 7116198602
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | task id: 49820244
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | errors: (none)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | pilot state: finished 
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | transexitcode: 0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | exeerrorcode: 0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | exeerrordiag: 
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | exitcode: 0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | exitmsg: OK
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | cpuconsumptiontime: 51217 s
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | nevents: 400
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | neventsw: 0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | pid: 20812
[2026-05-05 11:28:37] 2026-05-05 09:23:15,254 | INFO     | pgrp: 20812
[2026-05-05 11:28:37] 2026-05-05 09:23:15,255 | INFO     | corecount: 4
[2026-05-05 11:28:37] 2026-05-05 09:23:15,255 | INFO     | event service: False
[2026-05-05 11:28:37] 2026-05-05 09:23:15,255 | INFO     | sizes: {0: 2272164, 11: 2272164, 13276: 2302323, 13277: 2302322, 13278: 2311398, 13279: 2311454, 13280: 2311776}
[2026-05-05 11:28:37] 2026-05-05 09:23:15,255 | INFO     | --------------------------------------------------
[2026-05-05 11:28:37] 2026-05-05 09:23:15,255 | INFO     | 
[2026-05-05 11:28:37] 2026-05-05 09:23:15,255 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-05-05 11:28:37] 2026-05-05 09:23:15,275 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,275 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,275 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,275 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,277 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,277 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,277 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 11:28:37] 2026-05-05 09:23:15,277 | INFO     | job 7116198602 has completed (purged errors)
[2026-05-05 11:28:37] 2026-05-05 09:23:15,277 | INFO     | overall cleanup function is called
[2026-05-05 11:28:37] 2026-05-05 09:23:16,287 | INFO     | --- collectZombieJob: --- 10, [20812]
[2026-05-05 11:28:37] 2026-05-05 09:23:16,287 | INFO     | zombie collector waiting for pid 20812
[2026-05-05 11:28:37] 2026-05-05 09:23:16,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 11:28:37] 2026-05-05 09:23:16,287 | INFO     | collected zombie processes
[2026-05-05 11:28:37] 2026-05-05 09:23:16,287 | INFO     | will attempt to kill all subprocesses of pid=20812
[2026-05-05 11:28:37] 2026-05-05 09:23:16,535 | INFO     | process IDs to be killed: [20812] (in reverse order)
[2026-05-05 11:28:37] 2026-05-05 09:23:16,642 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 11:28:37] 2026-05-05 09:23:16,643 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 11:28:37] 2026-05-05 09:23:16,654 | INFO     | did not find any defunct processes belonging to 20812
[2026-05-05 11:28:37] 2026-05-05 09:23:16,665 | INFO     | did not find any defunct processes belonging to 20812
[2026-05-05 11:28:37] 2026-05-05 09:23:16,665 | INFO     | Ready for new job
[2026-05-05 11:28:37] 2026-05-05 09:23:16,668 | INFO     | ***************************************
[2026-05-05 11:28:37] 2026-05-05 09:23:16,668 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 11:28:37] 2026-05-05 09:23:16,668 | INFO     | ***************************************
[2026-05-05 11:28:37] 2026-05-05 09:23:16,668 | INFO     | 
[2026-05-05 11:28:37] 2026-05-05 09:23:16,672 | INFO     | architecture information:
[2026-05-05 11:28:37] 2026-05-05 09:23:16,672 | INFO     | executing command: cat /etc/os-release
[2026-05-05 11:28:37] 2026-05-05 09:23:16,689 | INFO     | cat /etc/os-release:
[2026-05-05 11:28:37] NAME="CentOS Linux"
[2026-05-05 11:28:37] VERSION="7 (Core)"
[2026-05-05 11:28:37] ID="centos"
[2026-05-05 11:28:37] ID_LIKE="rhel fedora"
[2026-05-05 11:28:37] VERSION_ID="7"
[2026-05-05 11:28:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 11:28:37] ANSI_COLOR="0;31"
[2026-05-05 11:28:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 11:28:37] HOME_URL="https://www.centos.org/"
[2026-05-05 11:28:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 11:28:37] 
[2026-05-05 11:28:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 11:28:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 11:28:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 11:28:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 11:28:37] 
[2026-05-05 11:28:37] 2026-05-05 09:23:16,690 | INFO     | ***************************************
[2026-05-05 11:28:37] 2026-05-05 09:23:17,193 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-05-05 11:28:37] 2026-05-05 09:23:17,210 | INFO     | sufficient remaining disk space (35093741568 B)
[2026-05-05 11:28:37] 2026-05-05 09:23:17,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 11:28:37] 2026-05-05 09:23:17,211 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 11:28:37] 2026-05-05 09:23:17,211 | INFO     | update_server=False
[2026-05-05 11:28:37] 2026-05-05 09:23:17,211 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 11:28:37] 2026-05-05 09:23:17,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 11:28:37] 2026-05-05 09:23:17,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 11:28:37] 2026-05-05 09:23:17,212 | INFO     | aborting loop
[2026-05-05 11:28:37] 2026-05-05 09:23:17,334 | INFO     | all data control threads have been joined
[2026-05-05 11:28:37] 2026-05-05 09:23:17,529 | INFO     | all payload control threads have been joined
[2026-05-05 11:28:37] 2026-05-05 09:23:18,137 | INFO     | all job control threads have been joined
[2026-05-05 11:28:37] 2026-05-05 09:23:18,217 | INFO     | [job] retrieve thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:18,218 | INFO     | [job] queue monitor thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:18,218 | INFO     | [job] job monitor thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:18,339 | INFO     | [data] control thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:18,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 11:28:37] 2026-05-05 09:23:18,534 | INFO     | [payload] control thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:18,606 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:18,683 | INFO     | [payload] failed_post thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:18,711 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:18,932 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:18,936 | INFO     | [data] copytool_in thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:19,109 | INFO     | [payload] validate_post thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:19,140 | INFO     | [job] control thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:19,150 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:19,220 | INFO     | [job] validate thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:20,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 11:28:37] 2026-05-05 09:23:20,453 | INFO     | [data] copytool_out thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:24,034 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 11:28:37] 2026-05-05 09:23:46,824 | INFO     | PID=15514 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-05 11:28:37] 2026-05-05 09:23:46,825 | INFO     | .. there are 5 such processes running
[2026-05-05 11:28:37] 2026-05-05 09:23:46,826 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 11:28:37] 2026-05-05 09:23:46,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 11:28:37] 2026-05-05 09:23:46,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 11:28:37] 2026-05-05 09:24:02,136 | INFO     | [monitor] cgroup control has ended
[2026-05-05 11:28:37] 2026-05-05 09:24:02,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23266400053056)>', '<ExcThread(monitor, started 23266093668096)>']
[2026-05-05 11:28:37] 2026-05-05 09:24:02,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 11:28:37] 2026-05-05 09:24:02,901 | INFO     | [monitor] control thread has ended
[2026-05-05 11:28:37] 2026-05-05 09:24:07,214 | INFO     | all workflow threads have been joined
[2026-05-05 11:28:37] 2026-05-05 09:24:07,214 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 11:28:37] 2026-05-05 09:24:07,214 | INFO     | traces error code: 0
[2026-05-05 11:28:37] 2026-05-05 09:24:07,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 11:28:37] 2026-05-05 09:24:07,357 [wrapper] ==== pilot stdout END ====
[2026-05-05 11:28:37] 2026-05-05 09:24:07,359 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 11:28:37] 2026-05-05 09:24:07,361 [wrapper] pilotpid: 15514
[2026-05-05 11:28:37] 2026-05-05 09:24:07,363 [wrapper] Pilot exit status: 0
[2026-05-05 11:28:37] 2026-05-05 09:24:07,372 [wrapper] pandaids: 7116198602
[2026-05-05 11:28:37] 2026-05-05 09:24:07,421 [wrapper] cleanup supervisor_pilot  225323 15515
[2026-05-05 11:28:37] 2026-05-05 09:24:07,424 [wrapper] Test setup, not cleaning
[2026-05-05 11:28:37] 2026-05-05 09:24:07,427 [wrapper] apfmon messages muted
[2026-05-05 11:28:37] 2026-05-05 09:24:07,429 [wrapper] ==== wrapper stdout END ====
[2026-05-05 11:28:37] 2026-05-05 09:24:07,431 [wrapper] ==== wrapper stderr END ====
[2026-05-05 11:28:37]  *** Error codes and diagnostics ***
[2026-05-05 11:28:37]     "exeErrorCode": 0,
[2026-05-05 11:28:37]     "pilotErrorCode": 0,
[2026-05-05 11:28:37]  *** Listing of results directory ***
[2026-05-05 11:28:37] total 2451068
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc     683926 Apr 27 00:33 pilot3.tar.gz
[2026-05-05 11:28:37] -rwx------. 1 boinc boinc      36322 Apr 27 00:34 runpilot2-wrapper.sh
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc       5631 Apr 27 00:35 queuedata.json
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc        100 May  5 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 11:28:37] -rwxr-xr-x. 1 boinc boinc       7986 May  5 07:41 run_atlas
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc        105 May  5 07:41 job.xml
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc       6483 May  5 07:41 init_data.xml
[2026-05-05 11:28:37] -rw-r--r--. 2 boinc boinc 2224997476 May  5 07:41 EVNT.49820242._000026.pool.root.1
[2026-05-05 11:28:37] -rw-r--r--. 2 boinc boinc      15667 May  5 07:41 start_atlas.sh
[2026-05-05 11:28:37] drwxrwx--x. 2 boinc boinc       4096 May  5 07:41 shared
[2026-05-05 11:28:37] -rw-r--r--. 2 boinc boinc     697411 May  5 07:41 input.tar.gz
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc          0 May  5 07:41 boinc_lockfile
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc       2549 May  5 07:41 pandaJob.out
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc    1001784 May  5 07:41 agis_schedconf.cvmfs.json
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc        452 May  5 07:41 workernode_map.json
[2026-05-05 11:28:37] drwx------. 5 boinc boinc       4096 May  5 07:41 pilot3
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc  277230646 May  5 11:22 HITS.49820244._018265.pool.root.1
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc        488 May  5 11:22 boinc_task_state.xml
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc       1036 May  5 11:23 memory_monitor_summary.json
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc    1505918 May  5 11:23 agis_ddmendpoints.agis.ALL.json
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc     508980 May  5 11:23 log.49820244._018265.job.log.tgz.1
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc       6418 May  5 11:23 heartbeat_new.json
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc       6309 May  5 11:23 heartbeat.json
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc         95 May  5 11:23 pilot_heartbeat.json
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc       4829 May  5 11:24 pilotlog.txt
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc    1256984 May  5 11:24 log.49820244._018265.job.log.1
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc        357 May  5 11:24 output.list
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc        410 May  5 11:24 runtime_log
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc    1781760 May  5 11:24 result.tar.gz
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc       8828 May  5 11:24 runtime_log.err
[2026-05-05 11:28:37] -rw-------. 1 boinc boinc        664 May  5 11:24 92e529c747f2.diag
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc         27 May  5 11:28 wrapper_checkpoint.txt
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc       8192 May  5 11:28 boinc_mmap_file
[2026-05-05 11:28:37] -rw-r--r--. 1 boinc boinc      20803 May  5 11:28 stderr.txt
[2026-05-05 11:28:38] HITS file was successfully produced:
[2026-05-05 11:28:38] -rw-------. 1 boinc boinc 277230646 May  5 11:22 shared/HITS.pool.root.1
[2026-05-05 11:28:38]  *** Contents of shared directory: ***
[2026-05-05 11:28:38] total 2446036
[2026-05-05 11:28:38] -rw-r--r--. 2 boinc boinc 2224997476 May  5 07:41 ATLAS.root_0
[2026-05-05 11:28:38] -rw-r--r--. 2 boinc boinc      15667 May  5 07:41 start_atlas.sh
[2026-05-05 11:28:38] -rw-r--r--. 2 boinc boinc     697411 May  5 07:41 input.tar.gz
[2026-05-05 11:28:38] -rw-------. 1 boinc boinc  277230646 May  5 11:22 HITS.pool.root.1
[2026-05-05 11:28:38] -rw-------. 1 boinc boinc    1781760 May  5 11:24 result.tar.gz
11:28:39 (11322): run_atlas exited; CPU time 51649.368310
11:28:39 (11322): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN