Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:24:48 (2536686): wrapper (7.7.26015): starting
21:24:48 (2536686): wrapper: running run_atlas (--nthreads 8)
[2026-05-04 21:24:48] Arguments: --nthreads 8
[2026-05-04 21:24:48] Threads: 8
[2026-05-04 21:24:48] Checking for CVMFS
[2026-05-04 21:24:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 21:24:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 21:24:51] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 21:24:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 21:24:53] 2.13.3.0 11674 6447 181520 159222 1 17 27833067 40960001 18942 16776704 0 13628549 99.467 17476111 10423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-04 21:24:53] CVMFS is ok
[2026-05-04 21:24:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 21:24:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 21:24:53] Further information can be found at the LHC@home message board.
[2026-05-04 21:24:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 21:24:53] Checking for apptainer binary...
[2026-05-04 21:24:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 21:24:53] Running /usr/bin/apptainer --version
[2026-05-04 21:24:54] apptainer version 1.4.5-3.el9
[2026-05-04 21:24:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 21:24:56] c7-10-13.aglt2.org
[2026-05-04 21:24:56] apptainer works
[2026-05-04 21:24:56] Set ATHENA_PROC_NUMBER=8
[2026-05-04 21:24:56] Set ATHENA_CORE_NUMBER=8
[2026-05-04 21:24:57] Starting ATLAS job with PandaID=7116190298
[2026-05-04 21:24:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 16:18:47]  *** The last 200 lines of the pilot log: ***
[2026-05-05 16:18:47] 2026-05-05 20:17:49,644 | INFO     | fitting pss+swap vs Time
[2026-05-05 16:18:47] 2026-05-05 20:17:49,646 | INFO     | sum of square deviations: 421793411253.10815
[2026-05-05 16:18:47] 2026-05-05 20:17:49,724 | INFO     | sum of deviations: 908350183843.2517
[2026-05-05 16:18:47] 2026-05-05 20:17:49,725 | INFO     | mean x (centered): 0.0
[2026-05-05 16:18:47] 2026-05-05 20:17:49,725 | INFO     | mean y: 2542663.2924187724
[2026-05-05 16:18:47] 2026-05-05 20:17:49,725 | INFO     | intersect: 2542663.2924187724
[2026-05-05 16:18:47] 2026-05-05 20:17:49,730 | INFO     | chi2: 11.441555273888026
[2026-05-05 16:18:47] 2026-05-05 20:17:49,733 | INFO     | sum of square deviations: 416109543173.6484
[2026-05-05 16:18:47] 2026-05-05 20:17:49,874 | INFO     | sum of deviations: 1287344073665.5696
[2026-05-05 16:18:47] 2026-05-05 20:17:49,874 | INFO     | mean x (centered): 0.0
[2026-05-05 16:18:47] 2026-05-05 20:17:49,875 | INFO     | mean y: 2552830.3943789667
[2026-05-05 16:18:47] 2026-05-05 20:17:49,875 | INFO     | intersect: 2552830.3943789667
[2026-05-05 16:18:47] 2026-05-05 20:17:49,880 | INFO     | chi2: 7.550050445564701
[2026-05-05 16:18:47] 2026-05-05 20:17:49,880 | INFO     | current chi2=7.550050445564701 (change=34.012026644703944 %)
[2026-05-05 16:18:47] 2026-05-05 20:17:49,883 | INFO     | sum of square deviations: 410476574564.071
[2026-05-05 16:18:47] 2026-05-05 20:17:50,067 | INFO     | sum of deviations: 1277225911690.32
[2026-05-05 16:18:47] 2026-05-05 20:17:50,068 | INFO     | mean x (centered): 0.0
[2026-05-05 16:18:47] 2026-05-05 20:17:50,068 | INFO     | mean y: 2552556.659380692
[2026-05-05 16:18:47] 2026-05-05 20:17:50,068 | INFO     | intersect: 2552556.659380692
[2026-05-05 16:18:47] 2026-05-05 20:17:50,073 | INFO     | chi2: 7.550300923450476
[2026-05-05 16:18:47] 2026-05-05 20:17:50,073 | INFO     | current chi2=7.550300923450476 (change=-0.0033175657246364166 %)
[2026-05-05 16:18:47] 2026-05-05 20:17:50,074 | INFO     | right removable region: 1097
[2026-05-05 16:18:47] 2026-05-05 20:17:50,077 | INFO     | sum of square deviations: 416108396373.648
[2026-05-05 16:18:47] 2026-05-05 20:17:50,201 | INFO     | sum of deviations: 513420878192.3702
[2026-05-05 16:18:47] 2026-05-05 20:17:50,201 | INFO     | mean x (centered): 0.0
[2026-05-05 16:18:47] 2026-05-05 20:17:50,201 | INFO     | mean y: 2553255.2710788758
[2026-05-05 16:18:47] 2026-05-05 20:17:50,202 | INFO     | intersect: 2553255.2710788758
[2026-05-05 16:18:47] 2026-05-05 20:17:50,206 | INFO     | chi2: 7.086795987669165
[2026-05-05 16:18:47] 2026-05-05 20:17:50,206 | INFO     | current chi2=7.086795987669165 (change=38.06090327734827 %)
[2026-05-05 16:18:47] 2026-05-05 20:17:50,209 | INFO     | sum of square deviations: 410474751822.97943
[2026-05-05 16:18:47] 2026-05-05 20:17:50,333 | INFO     | sum of deviations: 245651293524.8608
[2026-05-05 16:18:47] 2026-05-05 20:17:50,334 | INFO     | mean x (centered): 0.0
[2026-05-05 16:18:47] 2026-05-05 20:17:50,334 | INFO     | mean y: 2560501.9143898
[2026-05-05 16:18:47] 2026-05-05 20:17:50,334 | INFO     | intersect: 2560501.9143898
[2026-05-05 16:18:47] 2026-05-05 20:17:50,338 | INFO     | chi2: 5.140838707362346
[2026-05-05 16:18:47] 2026-05-05 20:17:50,338 | INFO     | current chi2=5.140838707362346 (change=27.458914912927256 %)
[2026-05-05 16:18:47] 2026-05-05 20:17:50,353 | INFO     | sum of square deviations: 404892578761.7931
[2026-05-05 16:18:47] 2026-05-05 20:17:50,401 | INFO     | monitor loop #3888: job 0:7116190298 is in state 'finished'
[2026-05-05 16:18:47] 2026-05-05 20:17:50,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-05 16:18:47] 2026-05-05 20:17:50,611 | INFO     | sum of deviations: 102009548776.63373
[2026-05-05 16:18:47] 2026-05-05 20:17:50,611 | INFO     | mean x (centered): 0.0
[2026-05-05 16:18:47] 2026-05-05 20:17:50,611 | INFO     | mean y: 2564423.119853614
[2026-05-05 16:18:47] 2026-05-05 20:17:50,612 | INFO     | intersect: 2564423.119853614
[2026-05-05 16:18:47] 2026-05-05 20:17:50,616 | INFO     | chi2: 4.552575026091239
[2026-05-05 16:18:47] 2026-05-05 20:17:50,616 | INFO     | current chi2=4.552575026091239 (change=11.442951525178897 %)
[2026-05-05 16:18:47] 2026-05-05 20:17:50,616 | INFO     | left removable region: 15
[2026-05-05 16:18:47] 2026-05-05 20:17:50,619 | INFO     | sum of square deviations: 392791378513.3205
[2026-05-05 16:18:47] 2026-05-05 20:17:50,823 | INFO     | sum of deviations: 472286639595.02893
[2026-05-05 16:18:47] 2026-05-05 20:17:50,824 | INFO     | mean x (centered): 0.0
[2026-05-05 16:18:47] 2026-05-05 20:17:50,824 | INFO     | mean y: 2574629.7467652494
[2026-05-05 16:18:47] 2026-05-05 20:17:50,824 | INFO     | intersect: 2574629.7467652494
[2026-05-05 16:18:47] 2026-05-05 20:17:50,828 | INFO     | chi2: 0.577676923402369
[2026-05-05 16:18:47] 2026-05-05 20:17:50,829 | INFO     | current memory leak: 1.20 B/s (using 1082 data points, chi2=0.58)
[2026-05-05 16:18:47] 2026-05-05 20:17:50,831 | INFO     | could have reported an average CPU frequency of 3290 MHz (41 samples)
[2026-05-05 16:18:47] 2026-05-05 20:17:50,832 | INFO     | ..............................
[2026-05-05 16:18:47] 2026-05-05 20:17:50,832 | INFO     | . Timing measurements:
[2026-05-05 16:18:47] 2026-05-05 20:17:50,832 | INFO     | . get job = 1 s
[2026-05-05 16:18:47] 2026-05-05 20:17:50,832 | INFO     | . initial setup = 49 s
[2026-05-05 16:18:47] 2026-05-05 20:17:50,832 | INFO     | . payload setup = 181 s
[2026-05-05 16:18:47] 2026-05-05 20:17:50,832 | INFO     | . stage-in = 1 s
[2026-05-05 16:18:47] 2026-05-05 20:17:50,833 | INFO     | . payload execution = 67603 s
[2026-05-05 16:18:47] 2026-05-05 20:17:50,833 | INFO     | . stage-out = 4 s
[2026-05-05 16:18:47] 2026-05-05 20:17:50,833 | INFO     | . log creation = 0 s
[2026-05-05 16:18:47] 2026-05-05 20:17:50,833 | INFO     | ..............................
[2026-05-05 16:18:47] 2026-05-05 20:17:51,502 | INFO     | 
[2026-05-05 16:18:47] 2026-05-05 20:17:51,525 | INFO     | job summary report
[2026-05-05 16:18:47] 2026-05-05 20:17:51,525 | INFO     | --------------------------------------------------
[2026-05-05 16:18:47] 2026-05-05 20:17:51,526 | INFO     | PanDA job id: 7116190298
[2026-05-05 16:18:47] 2026-05-05 20:17:51,526 | INFO     | task id: 49820375
[2026-05-05 16:18:47] 2026-05-05 20:17:51,527 | INFO     | errors: (none)
[2026-05-05 16:18:47] 2026-05-05 20:17:51,527 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 16:18:47] 2026-05-05 20:17:51,527 | INFO     | pilot state: finished 
[2026-05-05 16:18:47] 2026-05-05 20:17:51,528 | INFO     | transexitcode: 0
[2026-05-05 16:18:47] 2026-05-05 20:17:51,528 | INFO     | exeerrorcode: 0
[2026-05-05 16:18:47] 2026-05-05 20:17:51,529 | INFO     | exeerrordiag: 
[2026-05-05 16:18:47] 2026-05-05 20:17:51,530 | INFO     | exitcode: 0
[2026-05-05 16:18:47] 2026-05-05 20:17:51,530 | INFO     | exitmsg: OK
[2026-05-05 16:18:47] 2026-05-05 20:17:51,530 | INFO     | cpuconsumptiontime: 185582 s
[2026-05-05 16:18:47] 2026-05-05 20:17:51,531 | INFO     | nevents: 400
[2026-05-05 16:18:47] 2026-05-05 20:17:51,531 | INFO     | neventsw: 0
[2026-05-05 16:18:47] 2026-05-05 20:17:51,531 | INFO     | pid: 2550306
[2026-05-05 16:18:47] 2026-05-05 20:17:51,532 | INFO     | pgrp: 2550306
[2026-05-05 16:18:47] 2026-05-05 20:17:51,532 | INFO     | corecount: 8
[2026-05-05 16:18:47] 2026-05-05 20:17:51,533 | INFO     | event service: False
[2026-05-05 16:18:47] 2026-05-05 20:17:51,534 | INFO     | sizes: {0: 2269730, 1: 2270415, 2: 2270415, 3: 2257642, 4: 2257642, 5: 2272456, 16: 2272456, 67789: 2327209, 67795: 2336263, 67799: 2336497}
[2026-05-05 16:18:47] 2026-05-05 20:17:51,535 | INFO     | --------------------------------------------------
[2026-05-05 16:18:47] 2026-05-05 20:17:51,535 | INFO     | 
[2026-05-05 16:18:47] 2026-05-05 20:17:51,536 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-05-05 16:18:47] 2026-05-05 20:17:51,610 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,611 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,611 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,611 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,614 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 16:18:47] 2026-05-05 20:17:51,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,615 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 16:18:47] 2026-05-05 20:17:51,615 | INFO     | job 7116190298 has completed (purged errors)
[2026-05-05 16:18:47] 2026-05-05 20:17:51,616 | INFO     | overall cleanup function is called
[2026-05-05 16:18:47] 2026-05-05 20:17:51,889 | INFO     | PID=2542099 has CPU usage=26.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-05 16:18:47] 2026-05-05 20:17:51,892 | INFO     | .. there are 17 such processes running
[2026-05-05 16:18:47] 2026-05-05 20:17:52,634 | INFO     | --- collectZombieJob: --- 10, [2550306]
[2026-05-05 16:18:47] 2026-05-05 20:17:52,634 | INFO     | zombie collector waiting for pid 2550306
[2026-05-05 16:18:47] 2026-05-05 20:17:52,634 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 16:18:47] 2026-05-05 20:17:52,634 | INFO     | collected zombie processes
[2026-05-05 16:18:47] 2026-05-05 20:17:52,635 | INFO     | will attempt to kill all subprocesses of pid=2550306
[2026-05-05 16:18:47] 2026-05-05 20:17:53,282 | INFO     | process IDs to be killed: [2550306] (in reverse order)
[2026-05-05 16:18:47] 2026-05-05 20:17:53,780 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 16:18:47] 2026-05-05 20:17:53,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 16:18:47] 2026-05-05 20:17:53,809 | INFO     | did not find any defunct processes belonging to 2550306
[2026-05-05 16:18:47] 2026-05-05 20:17:53,835 | INFO     | did not find any defunct processes belonging to 2550306
[2026-05-05 16:18:47] 2026-05-05 20:17:53,836 | INFO     | Ready for new job
[2026-05-05 16:18:47] 2026-05-05 20:17:53,843 | INFO     | ***************************************
[2026-05-05 16:18:47] 2026-05-05 20:17:53,843 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 16:18:47] 2026-05-05 20:17:53,844 | INFO     | ***************************************
[2026-05-05 16:18:47] 2026-05-05 20:17:53,844 | INFO     | 
[2026-05-05 16:18:47] 2026-05-05 20:17:53,854 | INFO     | architecture information:
[2026-05-05 16:18:47] 2026-05-05 20:17:53,855 | INFO     | executing command: cat /etc/os-release
[2026-05-05 16:18:47] 2026-05-05 20:17:53,890 | INFO     | cat /etc/os-release:
[2026-05-05 16:18:47] NAME="CentOS Linux"
[2026-05-05 16:18:47] VERSION="7 (Core)"
[2026-05-05 16:18:47] ID="centos"
[2026-05-05 16:18:47] ID_LIKE="rhel fedora"
[2026-05-05 16:18:47] VERSION_ID="7"
[2026-05-05 16:18:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 16:18:47] ANSI_COLOR="0;31"
[2026-05-05 16:18:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 16:18:47] HOME_URL="https://www.centos.org/"
[2026-05-05 16:18:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 16:18:47] 
[2026-05-05 16:18:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 16:18:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 16:18:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 16:18:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 16:18:47] 
[2026-05-05 16:18:47] 2026-05-05 20:17:53,890 | INFO     | ***************************************
[2026-05-05 16:18:47] 2026-05-05 20:17:54,395 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-05-05 16:18:47] 2026-05-05 20:17:54,681 | INFO     | sufficient remaining disk space (75215405056 B)
[2026-05-05 16:18:47] 2026-05-05 20:17:54,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 16:18:47] 2026-05-05 20:17:54,696 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 16:18:47] 2026-05-05 20:17:54,696 | INFO     | update_server=False
[2026-05-05 16:18:47] 2026-05-05 20:17:54,696 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 16:18:47] 2026-05-05 20:17:54,707 | INFO     | all payload control threads have been joined
[2026-05-05 16:18:47] 2026-05-05 20:17:54,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 16:18:47] 2026-05-05 20:17:54,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 16:18:47] 2026-05-05 20:17:54,712 | INFO     | aborting loop
[2026-05-05 16:18:47] 2026-05-05 20:17:55,316 | INFO     | all data control threads have been joined
[2026-05-05 16:18:47] 2026-05-05 20:17:55,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 16:18:47] 2026-05-05 20:17:55,702 | INFO     | [job] retrieve thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:55,719 | INFO     | [job] job monitor thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:55,729 | INFO     | [payload] control thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:55,730 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:55,806 | INFO     | [payload] failed_post thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:55,958 | INFO     | all job control threads have been joined
[2026-05-05 16:18:47] 2026-05-05 20:17:56,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 16:18:47] 2026-05-05 20:17:56,212 | INFO     | [payload] validate_post thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:56,324 | INFO     | [data] control thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:56,448 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:56,452 | INFO     | [data] copytool_in thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:56,452 | INFO     | [job] validate thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:56,452 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:56,964 | INFO     | [job] control thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:57,137 | INFO     | [job] queue monitor thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:57,179 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:57,492 | INFO     | [data] copytool_out thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:17:58,717 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 16:18:47] 2026-05-05 20:18:24,761 | INFO     | PID=2542099 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-05 16:18:47] 2026-05-05 20:18:24,761 | INFO     | .. there are 17 such processes running
[2026-05-05 16:18:47] 2026-05-05 20:18:24,763 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 16:18:47] 2026-05-05 20:18:24,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 16:18:47] 2026-05-05 20:18:24,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 16:18:47] 2026-05-05 20:18:38,467 | INFO     | [monitor] cgroup control has ended
[2026-05-05 16:18:47] 2026-05-05 20:18:39,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140025392555840)>', '<ExcThread(monitor, started 140024825755392)>']
[2026-05-05 16:18:47] 2026-05-05 20:18:39,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 16:18:47] 2026-05-05 20:18:39,851 | INFO     | [monitor] control thread has ended
[2026-05-05 16:18:47] 2026-05-05 20:18:44,643 | INFO     | all workflow threads have been joined
[2026-05-05 16:18:47] 2026-05-05 20:18:44,643 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 16:18:47] 2026-05-05 20:18:44,643 | INFO     | traces error code: 0
[2026-05-05 16:18:47] 2026-05-05 20:18:44,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 16:18:47] 2026-05-05 20:18:44,988 [wrapper] ==== pilot stdout END ====
[2026-05-05 16:18:47] 2026-05-05 20:18:44,996 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 16:18:47] 2026-05-05 20:18:45,001 [wrapper] pilotpid: 2542099
[2026-05-05 16:18:47] 2026-05-05 20:18:45,056 [wrapper] Pilot exit status: 0
[2026-05-05 16:18:47] 2026-05-05 20:18:45,382 [wrapper] pandaids: 7116190298
[2026-05-05 16:18:47] 2026-05-05 20:18:46,576 [wrapper] cleanup supervisor_pilot 4025687 2542100
[2026-05-05 16:18:47] 2026-05-05 20:18:46,582 [wrapper] Test setup, not cleaning
[2026-05-05 16:18:47] 2026-05-05 20:18:46,590 [wrapper] apfmon messages muted
[2026-05-05 16:18:47] 2026-05-05 20:18:46,599 [wrapper] ==== wrapper stdout END ====
[2026-05-05 16:18:47] 2026-05-05 20:18:46,604 [wrapper] ==== wrapper stderr END ====
[2026-05-05 16:18:47]  *** Error codes and diagnostics ***
[2026-05-05 16:18:47]     "exeErrorCode": 0,
[2026-05-05 16:18:47]     "pilotErrorCode": 0,
[2026-05-05 16:18:47]  *** Listing of results directory ***
[2026-05-05 16:18:47] total 2484788
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas     683926 Apr 26 17:08 pilot3.tar.gz
[2026-05-05 16:18:47] -rwx------. 1 boincer umatlas      36322 Apr 26 17:09 runpilot2-wrapper.sh
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas       5631 Apr 26 17:15 queuedata.json
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas        100 May  4 21:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 16:18:47] -rwxr-xr-x. 1 boincer umatlas       7986 May  4 21:24 run_atlas
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas        105 May  4 21:24 job.xml
[2026-05-05 16:18:47] -rw-r--r--. 2 boincer umatlas 2247608693 May  4 21:24 EVNT.49820373._000034.pool.root.1
[2026-05-05 16:18:47] -rw-r--r--. 2 boincer umatlas      15667 May  4 21:24 start_atlas.sh
[2026-05-05 16:18:47] drwxrwx--x. 2 boincer umatlas       4096 May  4 21:24 shared
[2026-05-05 16:18:47] -rw-r--r--. 2 boincer umatlas     697428 May  4 21:24 input.tar.gz
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas          0 May  4 21:24 boinc_lockfile
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas       2584 May  4 21:24 pandaJob.out
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas         57 May  4 21:24 setup.sh.local
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas    1002597 May  4 21:26 agis_schedconf.cvmfs.json
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas        430 May  4 21:27 workernode_map.json
[2026-05-05 16:18:47] drwx------. 5 boincer umatlas       4096 May  4 21:27 pilot3
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas       6823 May  5 16:10 init_data.xml
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas  280564418 May  5 16:11 HITS.49820375._014637.pool.root.1
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas        490 May  5 16:11 boinc_task_state.xml
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas       1046 May  5 16:17 memory_monitor_summary.json
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas    1505918 May  5 16:17 agis_ddmendpoints.agis.ALL.json
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas     879290 May  5 16:17 log.49820375._014637.job.log.tgz.1
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas       6359 May  5 16:17 heartbeat_new.json
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas       6250 May  5 16:17 heartbeat.json
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas         95 May  5 16:18 pilot_heartbeat.json
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas       8192 May  5 16:18 boinc_mmap_file
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas         29 May  5 16:18 wrapper_checkpoint.txt
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas       4823 May  5 16:18 pilotlog.txt
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas    5173625 May  5 16:18 log.49820375._014637.job.log.1
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas        357 May  5 16:18 output.list
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas        410 May  5 16:18 runtime_log
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas    6072320 May  5 16:18 result.tar.gz
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas       8965 May  5 16:18 runtime_log.err
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas        660 May  5 16:18 7f018ac3895c.diag
[2026-05-05 16:18:47] -rw-r--r--. 1 boincer umatlas      21046 May  5 16:18 stderr.txt
[2026-05-05 16:18:47] HITS file was successfully produced:
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas 280564418 May  5 16:11 shared/HITS.pool.root.1
[2026-05-05 16:18:47]  *** Contents of shared directory: ***
[2026-05-05 16:18:47] total 2475564
[2026-05-05 16:18:47] -rw-r--r--. 2 boincer umatlas 2247608693 May  4 21:24 ATLAS.root_0
[2026-05-05 16:18:47] -rw-r--r--. 2 boincer umatlas      15667 May  4 21:24 start_atlas.sh
[2026-05-05 16:18:47] -rw-r--r--. 2 boincer umatlas     697428 May  4 21:24 input.tar.gz
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas  280564418 May  5 16:11 HITS.pool.root.1
[2026-05-05 16:18:47] -rw-------. 1 boincer umatlas    6072320 May  5 16:18 result.tar.gz
16:18:48 (2536686): run_atlas exited; CPU time 188490.758046
16:18:48 (2536686): called boinc_finish(0)

</stderr_txt>
]]>

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