Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:35:38 (4142): wrapper (7.7.26015): starting
02:35:38 (4142): wrapper: running run_atlas (--nthreads 4)
[2026-05-05 02:35:38] Arguments: --nthreads 4
[2026-05-05 02:35:38] Threads: 4
[2026-05-05 02:35:38] Checking for CVMFS
[2026-05-05 02:35:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-05 02:35:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-05 02:35:50] Running cvmfs_config stat atlas.cern.ch
[2026-05-05 02:35:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-05 02:35:51] 2.11.5.0 4364 0 23820 159222 3 1 3576914 4194304 0 130560 0 0 0.000 1282 545 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-05-05 02:35:51] CVMFS is ok
[2026-05-05 02:35:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-05 02:35:51] Checking for apptainer binary...
[2026-05-05 02:35:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-05 02:35:51] Running /usr/bin/apptainer --version
[2026-05-05 02:35:52] apptainer version 1.0.3
[2026-05-05 02:35:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-05 02:35:52] TeeC24
[2026-05-05 02:35:52] apptainer works
[2026-05-05 02:35:52] Set ATHENA_PROC_NUMBER=4
[2026-05-05 02:35:52] Set ATHENA_CORE_NUMBER=4
[2026-05-05 02:35:53] Starting ATLAS job with PandaID=7116197215
[2026-05-05 02:35:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 08:01:06]  *** The last 200 lines of the pilot log: ***
[2026-05-05 08:01:06] 2026-05-05 07:00:04,424 | INFO     |  -- lfn=log.49820244._017630.job.log.tgz.1, status_code=0, status=transferred
[2026-05-05 08:01:06] 2026-05-05 07:00:04,424 | INFO     | stage-out finished correctly
[2026-05-05 08:01:06] 2026-05-05 07:00:04,643 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-05 08:01:06] 2026-05-05 07:00:04,687 | INFO     | job 7116197215 has state=finished
[2026-05-05 08:01:06] 2026-05-05 07:00:04,687 | INFO     | preparing for final server update for job 7116197215 in state='finished'
[2026-05-05 08:01:06] 2026-05-05 07:00:04,687 | INFO     | reading metadata from: /home/m/BOINC/slots/0/PanDA_Pilot-7116197215/jobReport.json
[2026-05-05 08:01:06] 2026-05-05 07:00:04,688 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/0/workernode_map.json
[2026-05-05 08:01:06] 2026-05-05 07:00:04,688 | INFO     | this job has now completed (state=finished)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,688 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,689 | INFO     | log transfer has been attempted: DONE
[2026-05-05 08:01:06] 2026-05-05 07:00:04,689 | INFO     | job 7116197215 has finished - writing final server update
[2026-05-05 08:01:06] 2026-05-05 07:00:04,689 | INFO     | total number of processed events: 400 (read)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,708 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-7116197215/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,708 | INFO     | extracted standard info from prmon json
[2026-05-05 08:01:06] 2026-05-05 07:00:04,709 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 08:01:06] 2026-05-05 07:00:04,709 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 08:01:06] 2026-05-05 07:00:04,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 08:01:06] 2026-05-05 07:00:04,711 | INFO     | fitting pss+swap vs Time
[2026-05-05 08:01:06] 2026-05-05 07:00:04,711 | INFO     | sum of square deviations: 9971385099.5
[2026-05-05 08:01:06] 2026-05-05 07:00:04,712 | INFO     | sum of deviations: -8431301751.500002
[2026-05-05 08:01:06] 2026-05-05 07:00:04,713 | INFO     | mean x (centered): 0.0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,713 | INFO     | mean y: 2403872.0283018867
[2026-05-05 08:01:06] 2026-05-05 07:00:04,713 | INFO     | intersect: 2403872.0283018867
[2026-05-05 08:01:06] 2026-05-05 07:00:04,713 | INFO     | chi2: 2.141832401584636
[2026-05-05 08:01:06] 2026-05-05 07:00:04,713 | INFO     | sum of square deviations: 9508390372.0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,714 | INFO     | sum of deviations: -8147224659.999991
[2026-05-05 08:01:06] 2026-05-05 07:00:04,715 | INFO     | mean x (centered): 0.0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,715 | INFO     | mean y: 2403965.603833866
[2026-05-05 08:01:06] 2026-05-05 07:00:04,715 | INFO     | intersect: 2403965.603833866
[2026-05-05 08:01:06] 2026-05-05 07:00:04,715 | INFO     | chi2: 2.1417055672905247
[2026-05-05 08:01:06] 2026-05-05 07:00:04,715 | INFO     | current chi2=2.1417055672905247 (change=0.005921765588081661 %)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,715 | INFO     | right removable region: 312
[2026-05-05 08:01:06] 2026-05-05 07:00:04,716 | INFO     | sum of square deviations: 9508390372.0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,717 | INFO     | sum of deviations: -64372387684.0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,717 | INFO     | mean x (centered): 0.0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,717 | INFO     | mean y: 2422199.8626198084
[2026-05-05 08:01:06] 2026-05-05 07:00:04,718 | INFO     | intersect: 2422199.8626198084
[2026-05-05 08:01:06] 2026-05-05 07:00:04,718 | INFO     | chi2: 0.4134316235443855
[2026-05-05 08:01:06] 2026-05-05 07:00:04,718 | INFO     | current chi2=0.4134316235443855 (change=80.6972934372219 %)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,718 | INFO     | sum of square deviations: 9059954057.0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,720 | INFO     | sum of deviations: -51708029423.5
[2026-05-05 08:01:06] 2026-05-05 07:00:04,720 | INFO     | mean x (centered): 0.0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,720 | INFO     | mean y: 2417882.672077922
[2026-05-05 08:01:06] 2026-05-05 07:00:04,720 | INFO     | intersect: 2417882.672077922
[2026-05-05 08:01:06] 2026-05-05 07:00:04,720 | INFO     | chi2: 0.3764341063462351
[2026-05-05 08:01:06] 2026-05-05 07:00:04,721 | INFO     | current chi2=0.3764341063462351 (change=8.948884190562751 %)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,721 | INFO     | left removable region: 10
[2026-05-05 08:01:06] 2026-05-05 07:00:04,721 | INFO     | sum of square deviations: 8540720135.5
[2026-05-05 08:01:06] 2026-05-05 07:00:04,723 | INFO     | sum of deviations: -50588353378.49999
[2026-05-05 08:01:06] 2026-05-05 07:00:04,723 | INFO     | mean x (centered): 0.0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,723 | INFO     | mean y: 2418277.341059603
[2026-05-05 08:01:06] 2026-05-05 07:00:04,723 | INFO     | intersect: 2418277.341059603
[2026-05-05 08:01:06] 2026-05-05 07:00:04,723 | INFO     | chi2: 0.3749822019258084
[2026-05-05 08:01:06] 2026-05-05 07:00:04,723 | INFO     | current memory leak: -5.92 B/s (using 302 data points, chi2=0.37)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,723 | INFO     | could have reported an average CPU frequency of 3341 MHz (14 samples)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,724 | INFO     | ..............................
[2026-05-05 08:01:06] 2026-05-05 07:00:04,724 | INFO     | . Timing measurements:
[2026-05-05 08:01:06] 2026-05-05 07:00:04,724 | INFO     | . get job = 0 s
[2026-05-05 08:01:06] 2026-05-05 07:00:04,724 | INFO     | . initial setup = 12 s
[2026-05-05 08:01:06] 2026-05-05 07:00:04,724 | INFO     | . payload setup = 6 s
[2026-05-05 08:01:06] 2026-05-05 07:00:04,724 | INFO     | . stage-in = 0 s
[2026-05-05 08:01:06] 2026-05-05 07:00:04,724 | INFO     | . payload execution = 19387 s
[2026-05-05 08:01:06] 2026-05-05 07:00:04,724 | INFO     | . stage-out = 7 s
[2026-05-05 08:01:06] 2026-05-05 07:00:04,724 | INFO     | . log creation = 0 s
[2026-05-05 08:01:06] 2026-05-05 07:00:04,724 | INFO     | ..............................
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | 
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | job summary report
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | --------------------------------------------------
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | PanDA job id: 7116197215
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | task id: 49820244
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | errors: (none)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | pilot state: finished 
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | transexitcode: 0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | exeerrorcode: 0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | exeerrordiag: 
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | exitcode: 0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | exitmsg: OK
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | cpuconsumptiontime: 75496 s
[2026-05-05 08:01:06] 2026-05-05 07:00:04,762 | INFO     | nevents: 400
[2026-05-05 08:01:06] 2026-05-05 07:00:04,763 | INFO     | neventsw: 0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,763 | INFO     | pid: 12837
[2026-05-05 08:01:06] 2026-05-05 07:00:04,763 | INFO     | pgrp: 12837
[2026-05-05 08:01:06] 2026-05-05 07:00:04,763 | INFO     | corecount: 4
[2026-05-05 08:01:06] 2026-05-05 07:00:04,763 | INFO     | event service: False
[2026-05-05 08:01:06] 2026-05-05 07:00:04,763 | INFO     | sizes: {0: 2272202, 11: 2272202, 19397: 2305453, 19405: 2314449, 19406: 2314699}
[2026-05-05 08:01:06] 2026-05-05 07:00:04,763 | INFO     | --------------------------------------------------
[2026-05-05 08:01:06] 2026-05-05 07:00:04,763 | INFO     | 
[2026-05-05 08:01:06] 2026-05-05 07:00:04,763 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2026-05-05 08:01:06] 2026-05-05 07:00:04,770 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,770 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,770 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,770 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | job 7116197215 has completed (purged errors)
[2026-05-05 08:01:06] 2026-05-05 07:00:04,771 | INFO     | overall cleanup function is called
[2026-05-05 08:01:06] 2026-05-05 07:00:05,778 | INFO     | --- collectZombieJob: --- 10, [12837]
[2026-05-05 08:01:06] 2026-05-05 07:00:05,778 | INFO     | zombie collector waiting for pid 12837
[2026-05-05 08:01:06] 2026-05-05 07:00:05,779 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 08:01:06] 2026-05-05 07:00:05,779 | INFO     | collected zombie processes
[2026-05-05 08:01:06] 2026-05-05 07:00:05,779 | INFO     | will attempt to kill all subprocesses of pid=12837
[2026-05-05 08:01:06] 2026-05-05 07:00:05,822 | INFO     | process IDs to be killed: [12837] (in reverse order)
[2026-05-05 08:01:06] 2026-05-05 07:00:05,840 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 08:01:06] 2026-05-05 07:00:05,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 08:01:06] 2026-05-05 07:00:05,842 | INFO     | did not find any defunct processes belonging to 12837
[2026-05-05 08:01:06] 2026-05-05 07:00:05,843 | INFO     | did not find any defunct processes belonging to 12837
[2026-05-05 08:01:06] 2026-05-05 07:00:05,843 | INFO     | Ready for new job
[2026-05-05 08:01:06] 2026-05-05 07:00:05,844 | INFO     | ***************************************
[2026-05-05 08:01:06] 2026-05-05 07:00:05,844 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 08:01:06] 2026-05-05 07:00:05,844 | INFO     | ***************************************
[2026-05-05 08:01:06] 2026-05-05 07:00:05,844 | INFO     | 
[2026-05-05 08:01:06] 2026-05-05 07:00:05,864 | INFO     | architecture information:
[2026-05-05 08:01:06] 2026-05-05 07:00:05,864 | INFO     | executing command: cat /etc/os-release
[2026-05-05 08:01:06] 2026-05-05 07:00:05,873 | INFO     | cat /etc/os-release:
[2026-05-05 08:01:06] NAME="CentOS Linux"
[2026-05-05 08:01:06] VERSION="7 (Core)"
[2026-05-05 08:01:06] ID="centos"
[2026-05-05 08:01:06] ID_LIKE="rhel fedora"
[2026-05-05 08:01:06] VERSION_ID="7"
[2026-05-05 08:01:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 08:01:06] ANSI_COLOR="0;31"
[2026-05-05 08:01:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 08:01:06] HOME_URL="https://www.centos.org/"
[2026-05-05 08:01:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 08:01:06] 
[2026-05-05 08:01:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 08:01:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 08:01:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 08:01:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 08:01:06] 
[2026-05-05 08:01:06] 2026-05-05 07:00:05,873 | INFO     | ***************************************
[2026-05-05 08:01:06] 2026-05-05 07:00:06,377 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2026-05-05 08:01:06] 2026-05-05 07:00:06,389 | INFO     | sufficient remaining disk space (409406013440 B)
[2026-05-05 08:01:06] 2026-05-05 07:00:06,389 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 08:01:06] 2026-05-05 07:00:06,389 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 08:01:06] 2026-05-05 07:00:06,390 | INFO     | update_server=False
[2026-05-05 08:01:06] 2026-05-05 07:00:06,390 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 08:01:06] 2026-05-05 07:00:06,390 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 08:01:06] 2026-05-05 07:00:06,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 08:01:06] 2026-05-05 07:00:06,578 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-05 08:01:06] 2026-05-05 07:00:06,578 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-05 08:01:06] 2026-05-05 07:00:06,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 08:01:06] 2026-05-05 07:00:06,579 | INFO     | will abort loop
[2026-05-05 08:01:06] 2026-05-05 07:00:06,633 | INFO     | all data control threads have been joined
[2026-05-05 08:01:06] 2026-05-05 07:00:07,153 | INFO     | all job control threads have been joined
[2026-05-05 08:01:06] 2026-05-05 07:00:07,334 | INFO     | all payload control threads have been joined
[2026-05-05 08:01:06] 2026-05-05 07:00:07,395 | INFO     | [job] queue monitor thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:07,395 | INFO     | [job] retrieve thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:07,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 08:01:06] 2026-05-05 07:00:07,584 | INFO     | [job] job monitor thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:07,638 | INFO     | [data] control thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:07,756 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:07,994 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:08,158 | INFO     | [job] control thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:08,336 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:08,336 | INFO     | [job] validate thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:08,340 | INFO     | [payload] control thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:08,501 | INFO     | [payload] validate_post thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:08,570 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:08,654 | INFO     | [payload] failed_post thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:08,742 | INFO     | [data] copytool_in thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:09,476 | INFO     | [data] copytool_out thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:10,396 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 08:01:06] 2026-05-05 07:00:36,554 | INFO     | PID=8456 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-05 08:01:06] 2026-05-05 07:00:36,555 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 08:01:06] 2026-05-05 07:00:36,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 08:01:06] 2026-05-05 07:00:36,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 08:01:06] 2026-05-05 07:00:59,662 | INFO     | [monitor] cgroup control has ended
[2026-05-05 08:01:06] 2026-05-05 07:01:01,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301811492672)>', '<ExcThread(monitor, started 140301364598528)>']
[2026-05-05 08:01:06] 2026-05-05 07:01:02,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 08:01:06] 2026-05-05 07:01:02,687 | INFO     | [monitor] control thread has ended
[2026-05-05 08:01:06] 2026-05-05 07:01:06,708 | INFO     | all workflow threads have been joined
[2026-05-05 08:01:06] 2026-05-05 07:01:06,708 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 08:01:06] 2026-05-05 07:01:06,708 | INFO     | traces error code: 0
[2026-05-05 08:01:06] 2026-05-05 07:01:06,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 08:01:06] 2026-05-05 07:01:06,799 [wrapper] ==== pilot stdout END ====
[2026-05-05 08:01:06] 2026-05-05 07:01:06,800 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 08:01:06] 2026-05-05 07:01:06,802 [wrapper] pilotpid: 8456
[2026-05-05 08:01:06] 2026-05-05 07:01:06,803 [wrapper] Pilot exit status: 0
[2026-05-05 08:01:06] 2026-05-05 07:01:06,823 [wrapper] pandaids: 7116197215
[2026-05-05 08:01:06] 2026-05-05 07:01:06,834 [wrapper] cleanup supervisor_pilot 19248 8457
[2026-05-05 08:01:06] 2026-05-05 07:01:06,835 [wrapper] Test setup, not cleaning
[2026-05-05 08:01:06] 2026-05-05 07:01:06,836 [wrapper] apfmon messages muted
[2026-05-05 08:01:06] 2026-05-05 07:01:06,837 [wrapper] ==== wrapper stdout END ====
[2026-05-05 08:01:06] 2026-05-05 07:01:06,838 [wrapper] ==== wrapper stderr END ====
[2026-05-05 08:01:06]  *** Error codes and diagnostics ***
[2026-05-05 08:01:06]     "exeErrorCode": 0,
[2026-05-05 08:01:06]     "pilotErrorCode": 0,
[2026-05-05 08:01:06]  *** Listing of results directory ***
[2026-05-05 08:01:06] total 2472384
[2026-05-05 08:01:06] -rwx------ 1 m m      36322 Apr 26 23:33 runpilot2-wrapper.sh
[2026-05-05 08:01:06] -rw-r--r-- 1 m m       5631 Apr 26 23:33 queuedata.json
[2026-05-05 08:01:06] -rw-r--r-- 1 m m     683926 Apr 26 23:33 pilot3.tar.gz
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m        100 May  5 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 08:01:06] -rwxr-xr-x 1 m m       7986 May  5 02:35 run_atlas
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m        105 May  5 02:35 job.xml
[2026-05-05 08:01:06] -rw-r--r-- 2 m m      15667 May  5 02:35 start_atlas.sh
[2026-05-05 08:01:06] drwxrwx--x 2 m m       4096 May  5 02:35 shared
[2026-05-05 08:01:06] -rw-r--r-- 2 m m     697396 May  5 02:35 input.tar.gz
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m       5793 May  5 02:35 init_data.xml
[2026-05-05 08:01:06] -rw-r--r-- 2 m m 2247923933 May  5 02:35 EVNT.49820242._000016.pool.root.1
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m          0 May  5 02:35 boinc_lockfile
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m       2549 May  5 02:35 pandaJob.out
[2026-05-05 08:01:06] -rw------- 1 m m    1002597 May  5 02:36 agis_schedconf.cvmfs.json
[2026-05-05 08:01:06] -rw------- 1 m m        415 May  5 02:36 workernode_map.json
[2026-05-05 08:01:06] drwx------ 5 m m       4096 May  5 02:36 pilot3
[2026-05-05 08:01:06] -rw------- 1 m m  275246466 May  5 07:59 HITS.49820244._017630.pool.root.1
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m        489 May  5 07:59 boinc_task_state.xml
[2026-05-05 08:01:06] -rw------- 1 m m       1027 May  5 07:59 memory_monitor_summary.json
[2026-05-05 08:01:06] -rw------- 1 m m    1505918 May  5 08:00 agis_ddmendpoints.agis.ALL.json
[2026-05-05 08:01:06] -rw------- 1 m m     455663 May  5 08:00 log.49820244._017630.job.log.tgz.1
[2026-05-05 08:01:06] -rw------- 1 m m       6345 May  5 08:00 heartbeat_new.json
[2026-05-05 08:01:06] -rw------- 1 m m       6236 May  5 08:00 heartbeat.json
[2026-05-05 08:01:06] -rw------- 1 m m         95 May  5 08:00 pilot_heartbeat.json
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m       8192 May  5 08:01 boinc_mmap_file
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m         28 May  5 08:01 wrapper_checkpoint.txt
[2026-05-05 08:01:06] -rw------- 1 m m       4930 May  5 08:01 pilotlog.txt
[2026-05-05 08:01:06] -rw------- 1 m m    1754080 May  5 08:01 log.49820244._017630.job.log.1
[2026-05-05 08:01:06] -rw------- 1 m m        357 May  5 08:01 output.list
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m        410 May  5 08:01 runtime_log
[2026-05-05 08:01:06] -rw------- 1 m m    2222080 May  5 08:01 result.tar.gz
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m       8352 May  5 08:01 runtime_log.err
[2026-05-05 08:01:06] -rw------- 1 m m        645 May  5 08:01 92cf82e854fb.diag
[2026-05-05 08:01:06] -rw-rw-r-- 1 m m      20802 May  5 08:01 stderr.txt
[2026-05-05 08:01:06] HITS file was successfully produced:
[2026-05-05 08:01:06] -rw------- 1 m m 275246466 May  5 07:59 shared/HITS.pool.root.1
[2026-05-05 08:01:06]  *** Contents of shared directory: ***
[2026-05-05 08:01:06] total 2466916
[2026-05-05 08:01:06] -rw-r--r-- 2 m m      15667 May  5 02:35 start_atlas.sh
[2026-05-05 08:01:06] -rw-r--r-- 2 m m     697396 May  5 02:35 input.tar.gz
[2026-05-05 08:01:06] -rw-r--r-- 2 m m 2247923933 May  5 02:35 ATLAS.root_0
[2026-05-05 08:01:06] -rw------- 1 m m  275246466 May  5 07:59 HITS.pool.root.1
[2026-05-05 08:01:06] -rw------- 1 m m    2222080 May  5 08:01 result.tar.gz
08:01:08 (4142): run_atlas exited; CPU time 75697.112778
08:01:08 (4142): called boinc_finish(0)

</stderr_txt>
]]>

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