Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
22:30:25 (3633868): wrapper (7.7.26015): starting
22:30:25 (3633868): wrapper: running run_atlas (--nthreads 3)
[2026-05-04 22:30:25] Arguments: --nthreads 3
[2026-05-04 22:30:25] Threads: 3
[2026-05-04 22:30:25] Checking for CVMFS
[2026-05-04 22:30:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 22:30:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 22:30:26] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 22:30:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 22:30:26] 2.13.3.0 3040294 11620 61272 159215 0 50 3205811 4096001 916 130560 0 6810991 99.894 1069710 1985 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.210:3128 1
[2026-05-04 22:30:26] CVMFS is ok
[2026-05-04 22:30:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 22:30:26] Checking for apptainer binary...
[2026-05-04 22:30:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 22:30:26] Running /usr/bin/apptainer --version
[2026-05-04 22:30:26] apptainer version 1.4.5
[2026-05-04 22:30:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 22:30:26] TS-P320
[2026-05-04 22:30:26] apptainer works
[2026-05-04 22:30:26] Set ATHENA_PROC_NUMBER=3
[2026-05-04 22:30:26] Set ATHENA_CORE_NUMBER=3
[2026-05-04 22:30:26] Starting ATLAS job with PandaID=7114675835
[2026-05-04 22:30:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 01:56:59]  *** The last 200 lines of the pilot log: ***
[2026-05-05 01:56:59] 2026-05-04 23:56:09,715 | INFO     | number of running child processes to parent process 3642351: 1
[2026-05-05 01:56:59] 2026-05-04 23:56:09,715 | INFO     | maximum number of monitored processes: 6
[2026-05-05 01:56:59] 2026-05-04 23:56:09,898 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-05 01:56:59] 2026-05-04 23:56:12,138 | INFO     | job 7114675835 has state=finished
[2026-05-05 01:56:59] 2026-05-04 23:56:12,138 | INFO     | preparing for final server update for job 7114675835 in state='finished'
[2026-05-05 01:56:59] 2026-05-04 23:56:12,138 | INFO     | reading metadata from: /var/lib/boinc2/slots/0/PanDA_Pilot-7114675835/jobReport.json
[2026-05-05 01:56:59] 2026-05-04 23:56:12,140 | INFO     | added worker_node to metadata from /var/lib/boinc2/slots/0/workernode_map.json
[2026-05-05 01:56:59] 2026-05-04 23:56:12,140 | INFO     | this job has now completed (state=finished)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,140 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,140 | INFO     | log transfer has been attempted: DONE
[2026-05-05 01:56:59] 2026-05-04 23:56:12,140 | INFO     | job 7114675835 has finished - writing final server update
[2026-05-05 01:56:59] 2026-05-04 23:56:12,140 | INFO     | total number of processed events: 400 (read)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,142 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-7114675835/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,142 | INFO     | extracted standard info from prmon json
[2026-05-05 01:56:59] 2026-05-04 23:56:12,142 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 01:56:59] 2026-05-04 23:56:12,142 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 01:56:59] 2026-05-04 23:56:12,142 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 01:56:59] 2026-05-04 23:56:12,145 | INFO     | fitting pss+swap vs Time
[2026-05-05 01:56:59] 2026-05-04 23:56:12,145 | INFO     | sum of square deviations: 2555770710.5
[2026-05-05 01:56:59] 2026-05-04 23:56:12,146 | INFO     | sum of deviations: -52568117986.00001
[2026-05-05 01:56:59] 2026-05-04 23:56:12,146 | INFO     | mean x (centered): 0.0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,146 | INFO     | mean y: 2408001.584158416
[2026-05-05 01:56:59] 2026-05-04 23:56:12,146 | INFO     | intersect: 2408001.584158416
[2026-05-05 01:56:59] 2026-05-04 23:56:12,146 | INFO     | chi2: 1.3744412488851763
[2026-05-05 01:56:59] 2026-05-04 23:56:12,146 | INFO     | sum of square deviations: 2370641658.0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,147 | INFO     | sum of deviations: -51106224133.00001
[2026-05-05 01:56:59] 2026-05-04 23:56:12,147 | INFO     | mean x (centered): 0.0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,147 | INFO     | mean y: 2409206.0558375632
[2026-05-05 01:56:59] 2026-05-04 23:56:12,147 | INFO     | intersect: 2409206.0558375632
[2026-05-05 01:56:59] 2026-05-04 23:56:12,148 | INFO     | chi2: 1.3652532645071624
[2026-05-05 01:56:59] 2026-05-04 23:56:12,148 | INFO     | current chi2=1.3652532645071624 (change=0.6684886957129885 %)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,148 | INFO     | right removable region: 196
[2026-05-05 01:56:59] 2026-05-04 23:56:12,148 | INFO     | sum of square deviations: 2370641658.0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,149 | INFO     | sum of deviations: -64605237982.0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,149 | INFO     | mean x (centered): 0.0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,149 | INFO     | mean y: 2417627.279187817
[2026-05-05 01:56:59] 2026-05-04 23:56:12,149 | INFO     | intersect: 2417627.279187817
[2026-05-05 01:56:59] 2026-05-04 23:56:12,149 | INFO     | chi2: 0.32854793301244684
[2026-05-05 01:56:59] 2026-05-04 23:56:12,149 | INFO     | current chi2=0.32854793301244684 (change=76.0958910918211 %)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,149 | INFO     | sum of square deviations: 2194675568.0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,150 | INFO     | sum of deviations: -55286176146.500015
[2026-05-05 01:56:59] 2026-05-04 23:56:12,150 | INFO     | mean x (centered): 0.0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,150 | INFO     | mean y: 2409545.5885416665
[2026-05-05 01:56:59] 2026-05-04 23:56:12,150 | INFO     | intersect: 2409545.5885416665
[2026-05-05 01:56:59] 2026-05-04 23:56:12,151 | INFO     | chi2: 0.3094772569648082
[2026-05-05 01:56:59] 2026-05-04 23:56:12,151 | INFO     | current chi2=0.3094772569648082 (change=5.804533869009653 %)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,151 | INFO     | left removable region: 10
[2026-05-05 01:56:59] 2026-05-04 23:56:12,151 | INFO     | sum of square deviations: 1995283922.5
[2026-05-05 01:56:59] 2026-05-04 23:56:12,152 | INFO     | sum of deviations: -53564565582.499985
[2026-05-05 01:56:59] 2026-05-04 23:56:12,152 | INFO     | mean x (centered): 0.0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,152 | INFO     | mean y: 2411126.1774193547
[2026-05-05 01:56:59] 2026-05-04 23:56:12,152 | INFO     | intersect: 2411126.1774193547
[2026-05-05 01:56:59] 2026-05-04 23:56:12,152 | INFO     | chi2: 0.2991537851272737
[2026-05-05 01:56:59] 2026-05-04 23:56:12,152 | INFO     | current memory leak: -26.85 B/s (using 186 data points, chi2=0.30)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,152 | INFO     | could have reported an average CPU frequency of 3999 MHz (10 samples)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,153 | INFO     | ..............................
[2026-05-05 01:56:59] 2026-05-04 23:56:12,153 | INFO     | . Timing measurements:
[2026-05-05 01:56:59] 2026-05-04 23:56:12,153 | INFO     | . get job = 0 s
[2026-05-05 01:56:59] 2026-05-04 23:56:12,153 | INFO     | . initial setup = 2 s
[2026-05-05 01:56:59] 2026-05-04 23:56:12,153 | INFO     | . payload setup = 4 s
[2026-05-05 01:56:59] 2026-05-04 23:56:12,153 | INFO     | . stage-in = 0 s
[2026-05-05 01:56:59] 2026-05-04 23:56:12,153 | INFO     | . payload execution = 12315 s
[2026-05-05 01:56:59] 2026-05-04 23:56:12,153 | INFO     | . stage-out = 0 s
[2026-05-05 01:56:59] 2026-05-04 23:56:12,153 | INFO     | . log creation = 0 s
[2026-05-05 01:56:59] 2026-05-04 23:56:12,153 | INFO     | ..............................
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | 
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | job summary report
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | --------------------------------------------------
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | PanDA job id: 7114675835
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | task id: 49863714
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | errors: (none)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | pilot state: finished 
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | transexitcode: 0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | exeerrorcode: 0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,464 | INFO     | exeerrordiag: 
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | exitcode: 0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | exitmsg: OK
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | cpuconsumptiontime: 36288 s
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | nevents: 400
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | neventsw: 0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | pid: 3642351
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | pgrp: 3642351
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | corecount: 3
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | event service: False
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | sizes: {0: 2272192, 11: 2272192, 12322: 2302208, 12323: 2311208, 12324: 2311264, 12326: 2311458}
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | --------------------------------------------------
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | 
[2026-05-05 01:56:59] 2026-05-04 23:56:12,465 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2026-05-05 01:56:59] 2026-05-04 23:56:12,477 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,479 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,479 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 01:56:59] 2026-05-04 23:56:12,479 | INFO     | job 7114675835 has completed (purged errors)
[2026-05-05 01:56:59] 2026-05-04 23:56:12,479 | INFO     | overall cleanup function is called
[2026-05-05 01:56:59] 2026-05-04 23:56:13,485 | INFO     | --- collectZombieJob: --- 10, [3642351]
[2026-05-05 01:56:59] 2026-05-04 23:56:13,486 | INFO     | zombie collector waiting for pid 3642351
[2026-05-05 01:56:59] 2026-05-04 23:56:13,486 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 01:56:59] 2026-05-04 23:56:13,486 | INFO     | collected zombie processes
[2026-05-05 01:56:59] 2026-05-04 23:56:13,486 | INFO     | will attempt to kill all subprocesses of pid=3642351
[2026-05-05 01:56:59] 2026-05-04 23:56:13,527 | INFO     | process IDs to be killed: [3642351] (in reverse order)
[2026-05-05 01:56:59] 2026-05-04 23:56:13,545 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 01:56:59] 2026-05-04 23:56:13,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 01:56:59] 2026-05-04 23:56:13,547 | INFO     | did not find any defunct processes belonging to 3642351
[2026-05-05 01:56:59] 2026-05-04 23:56:13,548 | INFO     | did not find any defunct processes belonging to 3642351
[2026-05-05 01:56:59] 2026-05-04 23:56:13,549 | INFO     | Ready for new job
[2026-05-05 01:56:59] 2026-05-04 23:56:13,550 | INFO     | ***************************************
[2026-05-05 01:56:59] 2026-05-04 23:56:13,550 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 01:56:59] 2026-05-04 23:56:13,550 | INFO     | ***************************************
[2026-05-05 01:56:59] 2026-05-04 23:56:13,550 | INFO     | 
[2026-05-05 01:56:59] 2026-05-04 23:56:13,550 | INFO     | architecture information:
[2026-05-05 01:56:59] 2026-05-04 23:56:13,551 | INFO     | executing command: cat /etc/os-release
[2026-05-05 01:56:59] 2026-05-04 23:56:13,559 | INFO     | cat /etc/os-release:
[2026-05-05 01:56:59] NAME="CentOS Linux"
[2026-05-05 01:56:59] VERSION="7 (Core)"
[2026-05-05 01:56:59] ID="centos"
[2026-05-05 01:56:59] ID_LIKE="rhel fedora"
[2026-05-05 01:56:59] VERSION_ID="7"
[2026-05-05 01:56:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 01:56:59] ANSI_COLOR="0;31"
[2026-05-05 01:56:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 01:56:59] HOME_URL="https://www.centos.org/"
[2026-05-05 01:56:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 01:56:59] 
[2026-05-05 01:56:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 01:56:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 01:56:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 01:56:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 01:56:59] 
[2026-05-05 01:56:59] 2026-05-04 23:56:13,559 | INFO     | ***************************************
[2026-05-05 01:56:59] 2026-05-04 23:56:14,061 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2026-05-05 01:56:59] 2026-05-04 23:56:14,068 | INFO     | sufficient remaining disk space (190752751616 B)
[2026-05-05 01:56:59] 2026-05-04 23:56:14,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 01:56:59] 2026-05-04 23:56:14,068 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 01:56:59] 2026-05-04 23:56:14,068 | INFO     | update_server=False
[2026-05-05 01:56:59] 2026-05-04 23:56:14,069 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 01:56:59] 2026-05-04 23:56:14,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 01:56:59] 2026-05-04 23:56:14,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 01:56:59] 2026-05-04 23:56:14,069 | INFO     | aborting loop
[2026-05-05 01:56:59] 2026-05-04 23:56:14,159 | INFO     | all job control threads have been joined
[2026-05-05 01:56:59] 2026-05-04 23:56:14,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 01:56:59] 2026-05-04 23:56:14,793 | INFO     | all payload control threads have been joined
[2026-05-05 01:56:59] 2026-05-04 23:56:14,802 | INFO     | all data control threads have been joined
[2026-05-05 01:56:59] 2026-05-04 23:56:14,871 | INFO     | job.realtimelogging is not enabled
[2026-05-05 01:56:59] 2026-05-04 23:56:15,070 | INFO     | [job] job monitor thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,073 | INFO     | [job] retrieve thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,073 | INFO     | [job] queue monitor thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,087 | INFO     | [job] validate thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,153 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,164 | INFO     | [job] control thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,189 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,271 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,279 | INFO     | [data] copytool_in thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,706 | INFO     | [payload] validate_post thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,798 | INFO     | [payload] control thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,808 | INFO     | [data] control thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,876 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:15,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 01:56:59] 2026-05-04 23:56:16,293 | INFO     | [data] copytool_out thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:16,441 | INFO     | [payload] failed_post thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:19,952 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 01:56:59] 2026-05-04 23:56:43,806 | INFO     | PID=3637942 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-05 01:56:59] 2026-05-04 23:56:43,806 | INFO     | .. there are 2 such processes running
[2026-05-05 01:56:59] 2026-05-04 23:56:43,807 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 01:56:59] 2026-05-04 23:56:43,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 01:56:59] 2026-05-04 23:56:43,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 01:56:59] 2026-05-04 23:56:54,011 | INFO     | [monitor] cgroup control has ended
[2026-05-05 01:56:59] 2026-05-04 23:56:54,134 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640585324352)>', '<ExcThread(monitor, started 139640082245376)>']
[2026-05-05 01:56:59] 2026-05-04 23:56:54,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 01:56:59] 2026-05-04 23:56:54,858 | INFO     | [monitor] control thread has ended
[2026-05-05 01:56:59] 2026-05-04 23:56:59,159 | INFO     | all workflow threads have been joined
[2026-05-05 01:56:59] 2026-05-04 23:56:59,159 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 01:56:59] 2026-05-04 23:56:59,159 | INFO     | traces error code: 0
[2026-05-05 01:56:59] 2026-05-04 23:56:59,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 01:56:59] 2026-05-04 23:56:59,218 [wrapper] ==== pilot stdout END ====
[2026-05-05 01:56:59] 2026-05-04 23:56:59,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 01:56:59] 2026-05-04 23:56:59,221 [wrapper] pilotpid: 3637942
[2026-05-05 01:56:59] 2026-05-04 23:56:59,222 [wrapper] Pilot exit status: 0
[2026-05-05 01:56:59] 2026-05-04 23:56:59,227 [wrapper] pandaids: 7114675835
[2026-05-05 01:56:59] 2026-05-04 23:56:59,238 [wrapper] cleanup supervisor_pilot 3694075 3637943
[2026-05-05 01:56:59] 2026-05-04 23:56:59,240 [wrapper] Test setup, not cleaning
[2026-05-05 01:56:59] 2026-05-04 23:56:59,241 [wrapper] apfmon messages muted
[2026-05-05 01:56:59] 2026-05-04 23:56:59,242 [wrapper] ==== wrapper stdout END ====
[2026-05-05 01:56:59] 2026-05-04 23:56:59,243 [wrapper] ==== wrapper stderr END ====
[2026-05-05 01:56:59]  *** Error codes and diagnostics ***
[2026-05-05 01:56:59]     "exeErrorCode": 0,
[2026-05-05 01:56:59]     "pilotErrorCode": 0,
[2026-05-05 01:56:59]  *** Listing of results directory ***
[2026-05-05 01:56:59] insgesamt 476620
[2026-05-05 01:56:59] -rwx------ 1 boinc boinc     36322 26. Apr 15:48 runpilot2-wrapper.sh
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc    683926 26. Apr 15:53 pilot3.tar.gz
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc      5631 26. Apr 15:55 queuedata.json
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc       100  4. Mai 22:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 01:56:59] -rwxr-xr-x 1 boinc boinc      7986  4. Mai 22:30 run_atlas
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc       105  4. Mai 22:30 job.xml
[2026-05-05 01:56:59] -rw-r--r-- 2 boinc boinc 259480655  4. Mai 22:30 EVNT.49863712._000071.pool.root.1
[2026-05-05 01:56:59] -rw-r--r-- 2 boinc boinc    697414  4. Mai 22:30 input.tar.gz
[2026-05-05 01:56:59] -rw-r--r-- 2 boinc boinc     15667  4. Mai 22:30 start_atlas.sh
[2026-05-05 01:56:59] drwxrwx--x 2 boinc boinc      4096  4. Mai 22:30 shared
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc         0  4. Mai 22:30 boinc_setup_complete
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc      9778  4. Mai 22:30 init_data.xml
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc         0  4. Mai 22:30 boinc_lockfile
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc      2577  4. Mai 22:30 pandaJob.out
[2026-05-05 01:56:59] -rw------- 1 boinc boinc        51  4. Mai 22:30 setup.sh.local
[2026-05-05 01:56:59] -rw------- 1 boinc boinc   1002597  4. Mai 22:30 agis_schedconf.cvmfs.json
[2026-05-05 01:56:59] -rw------- 1 boinc boinc       416  4. Mai 22:30 workernode_map.json
[2026-05-05 01:56:59] drwx------ 5 boinc boinc      4096  4. Mai 22:30 pilot3
[2026-05-05 01:56:59] -rw------- 1 boinc boinc 221501737  5. Mai 01:55 HITS.49863714._001257.pool.root.1
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc       488  5. Mai 01:55 boinc_task_state.xml
[2026-05-05 01:56:59] -rw------- 1 boinc boinc      1017  5. Mai 01:56 memory_monitor_summary.json
[2026-05-05 01:56:59] -rw------- 1 boinc boinc   1505918  5. Mai 01:56 agis_ddmendpoints.agis.ALL.json
[2026-05-05 01:56:59] -rw------- 1 boinc boinc    294423  5. Mai 01:56 log.49863714._001257.job.log.tgz.1
[2026-05-05 01:56:59] -rw------- 1 boinc boinc      6318  5. Mai 01:56 heartbeat_new.json
[2026-05-05 01:56:59] -rw------- 1 boinc boinc      6209  5. Mai 01:56 heartbeat.json
[2026-05-05 01:56:59] -rw------- 1 boinc boinc        95  5. Mai 01:56 pilot_heartbeat.json
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc      8192  5. Mai 01:56 boinc_mmap_file
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc        28  5. Mai 01:56 wrapper_checkpoint.txt
[2026-05-05 01:56:59] -rw------- 1 boinc boinc      4896  5. Mai 01:56 pilotlog.txt
[2026-05-05 01:56:59] -rw------- 1 boinc boinc   1176310  5. Mai 01:56 log.49863714._001257.job.log.1
[2026-05-05 01:56:59] -rw------- 1 boinc boinc       357  5. Mai 01:56 output.list
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc       410  5. Mai 01:56 runtime_log
[2026-05-05 01:56:59] -rw------- 1 boinc boinc   1484800  5. Mai 01:56 result.tar.gz
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc      8913  5. Mai 01:56 runtime_log.err
[2026-05-05 01:56:59] -rw------- 1 boinc boinc       646  5. Mai 01:56 17bf7f6a90b1.diag
[2026-05-05 01:56:59] -rw-r--r-- 1 boinc boinc     20850  5. Mai 01:56 stderr.txt
[2026-05-05 01:56:59] HITS file was successfully produced:
[2026-05-05 01:56:59] -rw------- 1 boinc boinc 221501737  5. Mai 01:55 shared/HITS.pool.root.1
[2026-05-05 01:56:59]  *** Contents of shared directory: ***
[2026-05-05 01:56:59] insgesamt 471868
[2026-05-05 01:56:59] -rw-r--r-- 2 boinc boinc 259480655  4. Mai 22:30 ATLAS.root_0
[2026-05-05 01:56:59] -rw-r--r-- 2 boinc boinc    697414  4. Mai 22:30 input.tar.gz
[2026-05-05 01:56:59] -rw-r--r-- 2 boinc boinc     15667  4. Mai 22:30 start_atlas.sh
[2026-05-05 01:56:59] -rw------- 1 boinc boinc 221501737  5. Mai 01:55 HITS.pool.root.1
[2026-05-05 01:56:59] -rw------- 1 boinc boinc   1484800  5. Mai 01:56 result.tar.gz
01:57:00 (3633868): run_atlas exited; CPU time 36386.956338
01:57:00 (3633868): called boinc_finish(0)

</stderr_txt>
]]>

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