Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:21:48 (3880965): wrapper (7.7.26015): starting
13:21:48 (3880965): wrapper: running run_atlas (--nthreads 8)
[2026-05-04 13:21:48] Arguments: --nthreads 8
[2026-05-04 13:21:48] Threads: 8
[2026-05-04 13:21:48] Checking for CVMFS
[2026-05-04 13:21:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 13:21:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 13:21:49] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 13:21:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 13:21:49] 2.13.3.0 12373 5971 144292 159206 0 699 27557521 32935937 24486 16776704 0 20783979 99.564 22345920 30018 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-04 13:21:49] CVMFS is ok
[2026-05-04 13:21:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 13:21:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 13:21:49] Further information can be found at the LHC@home message board.
[2026-05-04 13:21:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 13:21:49] Checking for apptainer binary...
[2026-05-04 13:21:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 13:21:49] Running /usr/bin/apptainer --version
[2026-05-04 13:21:50] apptainer version 1.4.5-3.el9
[2026-05-04 13:21:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 13:21:50] c-8-16.aglt2.org
[2026-05-04 13:21:50] apptainer works
[2026-05-04 13:21:50] Set ATHENA_PROC_NUMBER=8
[2026-05-04 13:21:50] Set ATHENA_CORE_NUMBER=8
[2026-05-04 13:21:50] Starting ATLAS job with PandaID=7120561248
[2026-05-04 13:21:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:11:50 (822358): wrapper (7.7.26015): starting
19:11:50 (822358): wrapper: running run_atlas (--nthreads 12)
[2026-05-04 19:11:51] Arguments: --nthreads 12
[2026-05-04 19:11:51] Threads: 12
[2026-05-04 19:11:51] This job has been restarted, cleaning up previous attempt
[2026-05-04 19:11:51] Checking for CVMFS
[2026-05-04 19:11:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 19:11:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 19:11:52] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 19:11:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 19:11:52] 2.13.3.0 12373 6321 132080 159219 2 341 31166873 32935937 25553 16776704 0 21563686 99.573 22616541 30019 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-04 19:11:52] CVMFS is ok
[2026-05-04 19:11:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 19:11:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 19:11:53] Further information can be found at the LHC@home message board.
[2026-05-04 19:11:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 19:11:53] Checking for apptainer binary...
[2026-05-04 19:11:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 19:11:53] Running /usr/bin/apptainer --version
[2026-05-04 19:11:53] apptainer version 1.4.5-3.el9
[2026-05-04 19:11:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 19:11:54] c-8-16.aglt2.org
[2026-05-04 19:11:54] apptainer works
[2026-05-04 19:11:54] Set ATHENA_PROC_NUMBER=12
[2026-05-04 19:11:54] Set ATHENA_CORE_NUMBER=12
[2026-05-04 19:11:54] Starting ATLAS job with PandaID=7120561248
[2026-05-04 19:11:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 21:57:19]  *** The last 200 lines of the pilot log: ***
[2026-05-04 21:57:19] 2026-05-05 01:56:17,204 | INFO     | stage-out finished correctly
[2026-05-04 21:57:19] 2026-05-05 01:56:17,582 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-04 21:57:19] 2026-05-05 01:56:18,524 | INFO     | monitor loop #661: job 0:7120561248 is in state 'finished'
[2026-05-04 21:57:19] 2026-05-05 01:56:18,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,577 | INFO     | job 7120561248 has state=finished
[2026-05-04 21:57:19] 2026-05-05 01:56:20,578 | INFO     | preparing for final server update for job 7120561248 in state='finished'
[2026-05-04 21:57:19] 2026-05-05 01:56:20,578 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7120561248/jobReport.json
[2026-05-04 21:57:19] 2026-05-05 01:56:20,581 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-05-04 21:57:19] 2026-05-05 01:56:20,582 | INFO     | this job has now completed (state=finished)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,586 | INFO     | log transfer has been attempted: DONE
[2026-05-04 21:57:19] 2026-05-05 01:56:20,586 | INFO     | job 7120561248 has finished - writing final server update
[2026-05-04 21:57:19] 2026-05-05 01:56:20,587 | INFO     | total number of processed events: 400 (read)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,595 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7120561248/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,595 | INFO     | extracted standard info from prmon json
[2026-05-04 21:57:19] 2026-05-05 01:56:20,596 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 21:57:19] 2026-05-05 01:56:20,596 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 21:57:19] 2026-05-05 01:56:20,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 21:57:19] 2026-05-05 01:56:20,600 | INFO     | fitting pss+swap vs Time
[2026-05-04 21:57:19] 2026-05-05 01:56:20,600 | INFO     | sum of square deviations: 1269969232.4437482
[2026-05-04 21:57:19] 2026-05-05 01:56:20,601 | INFO     | sum of deviations: 29809861426.3875
[2026-05-04 21:57:19] 2026-05-05 01:56:20,601 | INFO     | mean x (centered): 0.0
[2026-05-04 21:57:19] 2026-05-05 01:56:20,601 | INFO     | mean y: 2665110.0375
[2026-05-04 21:57:19] 2026-05-05 01:56:20,602 | INFO     | intersect: 2665110.0375
[2026-05-04 21:57:19] 2026-05-05 01:56:20,602 | INFO     | chi2: 3.193987324460973
[2026-05-04 21:57:19] 2026-05-05 01:56:20,602 | INFO     | sum of square deviations: 1154594137.0709705
[2026-05-04 21:57:19] 2026-05-05 01:56:20,603 | INFO     | sum of deviations: 39885309840.567726
[2026-05-04 21:57:19] 2026-05-05 01:56:20,603 | INFO     | mean x (centered): 0.0
[2026-05-04 21:57:19] 2026-05-05 01:56:20,603 | INFO     | mean y: 2678061.2193548386
[2026-05-04 21:57:19] 2026-05-05 01:56:20,603 | INFO     | intersect: 2678061.2193548386
[2026-05-04 21:57:19] 2026-05-05 01:56:20,604 | INFO     | chi2: 2.5027624363214014
[2026-05-04 21:57:19] 2026-05-05 01:56:20,604 | INFO     | current chi2=2.5027624363214014 (change=21.64144118061661 %)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,604 | INFO     | right removable region: 154
[2026-05-04 21:57:19] 2026-05-05 01:56:20,604 | INFO     | sum of square deviations: 1154567907.0709705
[2026-05-04 21:57:19] 2026-05-05 01:56:20,605 | INFO     | sum of deviations: -8157590034.012903
[2026-05-04 21:57:19] 2026-05-05 01:56:20,605 | INFO     | mean x (centered): 0.0
[2026-05-04 21:57:19] 2026-05-05 01:56:20,605 | INFO     | mean y: 2714874.7677419353
[2026-05-04 21:57:19] 2026-05-05 01:56:20,605 | INFO     | intersect: 2714874.7677419353
[2026-05-04 21:57:19] 2026-05-05 01:56:20,606 | INFO     | chi2: 1.0024838560401705
[2026-05-04 21:57:19] 2026-05-05 01:56:20,606 | INFO     | current chi2=1.0024838560401705 (change=68.61340530807045 %)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,606 | INFO     | sum of square deviations: 1046376019.1733334
[2026-05-04 21:57:19] 2026-05-05 01:56:20,607 | INFO     | sum of deviations: -20987367081.320007
[2026-05-04 21:57:19] 2026-05-05 01:56:20,607 | INFO     | mean x (centered): 0.0
[2026-05-04 21:57:19] 2026-05-05 01:56:20,607 | INFO     | mean y: 2732871.74
[2026-05-04 21:57:19] 2026-05-05 01:56:20,608 | INFO     | intersect: 2732871.74
[2026-05-04 21:57:19] 2026-05-05 01:56:20,608 | INFO     | chi2: 0.7538732473477923
[2026-05-04 21:57:19] 2026-05-05 01:56:20,608 | INFO     | current chi2=0.7538732473477923 (change=24.799462574329596 %)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,608 | INFO     | left removable region: 10
[2026-05-04 21:57:19] 2026-05-05 01:56:20,608 | INFO     | sum of square deviations: 925766239.1597219
[2026-05-04 21:57:19] 2026-05-05 01:56:20,609 | INFO     | sum of deviations: -9855523180.15972
[2026-05-04 21:57:19] 2026-05-05 01:56:20,609 | INFO     | mean x (centered): 0.0
[2026-05-04 21:57:19] 2026-05-05 01:56:20,610 | INFO     | mean y: 2749239.201388889
[2026-05-04 21:57:19] 2026-05-05 01:56:20,610 | INFO     | intersect: 2749239.201388889
[2026-05-04 21:57:19] 2026-05-05 01:56:20,610 | INFO     | chi2: 0.03386801759002033
[2026-05-04 21:57:19] 2026-05-05 01:56:20,610 | INFO     | current memory leak: -10.65 B/s (using 144 data points, chi2=0.03)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,611 | INFO     | could have reported an average CPU frequency of 2600 MHz (9 samples)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,611 | INFO     | ..............................
[2026-05-04 21:57:19] 2026-05-05 01:56:20,611 | INFO     | . Timing measurements:
[2026-05-04 21:57:19] 2026-05-05 01:56:20,611 | INFO     | . get job = 0 s
[2026-05-04 21:57:19] 2026-05-05 01:56:20,612 | INFO     | . initial setup = 5 s
[2026-05-04 21:57:19] 2026-05-05 01:56:20,612 | INFO     | . payload setup = 41 s
[2026-05-04 21:57:19] 2026-05-05 01:56:20,612 | INFO     | . stage-in = 0 s
[2026-05-04 21:57:19] 2026-05-05 01:56:20,612 | INFO     | . payload execution = 9751 s
[2026-05-04 21:57:19] 2026-05-05 01:56:20,612 | INFO     | . stage-out = 1 s
[2026-05-04 21:57:19] 2026-05-05 01:56:20,612 | INFO     | . log creation = 0 s
[2026-05-04 21:57:19] 2026-05-05 01:56:20,612 | INFO     | ..............................
[2026-05-04 21:57:19] 2026-05-05 01:56:20,709 | INFO     | 
[2026-05-04 21:57:19] 2026-05-05 01:56:20,710 | INFO     | job summary report
[2026-05-04 21:57:19] 2026-05-05 01:56:20,710 | INFO     | --------------------------------------------------
[2026-05-04 21:57:19] 2026-05-05 01:56:20,710 | INFO     | PanDA job id: 7120561248
[2026-05-04 21:57:19] 2026-05-05 01:56:20,710 | INFO     | task id: 49718416
[2026-05-04 21:57:19] 2026-05-05 01:56:20,710 | INFO     | errors: (none)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,710 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 21:57:19] 2026-05-05 01:56:20,710 | INFO     | pilot state: finished 
[2026-05-04 21:57:19] 2026-05-05 01:56:20,710 | INFO     | transexitcode: 0
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | exeerrorcode: 0
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | exeerrordiag: 
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | exitcode: 0
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | exitmsg: OK
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | cpuconsumptiontime: 49106 s
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | nevents: 400
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | neventsw: 0
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | pid: 831562
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | pgrp: 831562
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | corecount: 12
[2026-05-04 21:57:19] 2026-05-05 01:56:20,711 | INFO     | event service: False
[2026-05-04 21:57:19] 2026-05-05 01:56:20,712 | INFO     | sizes: {0: 2270404, 1: 2260427, 2: 2272261, 9796: 2300910, 9799: 2309964, 9802: 2310166}
[2026-05-04 21:57:19] 2026-05-05 01:56:20,712 | INFO     | --------------------------------------------------
[2026-05-04 21:57:19] 2026-05-05 01:56:20,712 | INFO     | 
[2026-05-04 21:57:19] 2026-05-05 01:56:20,712 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-04 21:57:19] 2026-05-05 01:56:20,731 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,733 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,733 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 21:57:19] 2026-05-05 01:56:20,733 | INFO     | job 7120561248 has completed (purged errors)
[2026-05-04 21:57:19] 2026-05-05 01:56:20,733 | INFO     | overall cleanup function is called
[2026-05-04 21:57:19] 2026-05-05 01:56:21,741 | INFO     | --- collectZombieJob: --- 10, [831562]
[2026-05-04 21:57:19] 2026-05-05 01:56:21,741 | INFO     | zombie collector waiting for pid 831562
[2026-05-04 21:57:19] 2026-05-05 01:56:21,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 21:57:19] 2026-05-05 01:56:21,742 | INFO     | collected zombie processes
[2026-05-04 21:57:19] 2026-05-05 01:56:21,742 | INFO     | will attempt to kill all subprocesses of pid=831562
[2026-05-04 21:57:19] 2026-05-05 01:56:22,082 | INFO     | process IDs to be killed: [831562] (in reverse order)
[2026-05-04 21:57:19] 2026-05-05 01:56:22,198 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 21:57:19] 2026-05-05 01:56:22,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 21:57:19] 2026-05-05 01:56:22,213 | INFO     | did not find any defunct processes belonging to 831562
[2026-05-04 21:57:19] 2026-05-05 01:56:22,227 | INFO     | did not find any defunct processes belonging to 831562
[2026-05-04 21:57:19] 2026-05-05 01:56:22,228 | INFO     | Ready for new job
[2026-05-04 21:57:19] 2026-05-05 01:56:22,229 | INFO     | ***************************************
[2026-05-04 21:57:19] 2026-05-05 01:56:22,230 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 21:57:19] 2026-05-05 01:56:22,230 | INFO     | ***************************************
[2026-05-04 21:57:19] 2026-05-05 01:56:22,230 | INFO     | 
[2026-05-04 21:57:19] 2026-05-05 01:56:22,232 | INFO     | architecture information:
[2026-05-04 21:57:19] 2026-05-05 01:56:22,232 | INFO     | executing command: cat /etc/os-release
[2026-05-04 21:57:19] 2026-05-05 01:56:22,253 | INFO     | cat /etc/os-release:
[2026-05-04 21:57:19] NAME="CentOS Linux"
[2026-05-04 21:57:19] VERSION="7 (Core)"
[2026-05-04 21:57:19] ID="centos"
[2026-05-04 21:57:19] ID_LIKE="rhel fedora"
[2026-05-04 21:57:19] VERSION_ID="7"
[2026-05-04 21:57:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 21:57:19] ANSI_COLOR="0;31"
[2026-05-04 21:57:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 21:57:19] HOME_URL="https://www.centos.org/"
[2026-05-04 21:57:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 21:57:19] 
[2026-05-04 21:57:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 21:57:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 21:57:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 21:57:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 21:57:19] 
[2026-05-04 21:57:19] 2026-05-05 01:56:22,254 | INFO     | ***************************************
[2026-05-04 21:57:19] 2026-05-05 01:56:22,758 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-04 21:57:19] 2026-05-05 01:56:22,778 | INFO     | sufficient remaining disk space (76067897344 B)
[2026-05-04 21:57:19] 2026-05-05 01:56:22,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 21:57:19] 2026-05-05 01:56:22,780 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 21:57:19] 2026-05-05 01:56:22,780 | INFO     | update_server=False
[2026-05-04 21:57:19] 2026-05-05 01:56:22,780 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 21:57:19] 2026-05-05 01:56:22,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 21:57:19] 2026-05-05 01:56:22,781 | INFO     | aborting loop
[2026-05-04 21:57:19] 2026-05-05 01:56:22,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 21:57:19] 2026-05-05 01:56:23,248 | INFO     | all data control threads have been joined
[2026-05-04 21:57:19] 2026-05-05 01:56:23,534 | INFO     | all payload control threads have been joined
[2026-05-04 21:57:19] 2026-05-05 01:56:23,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 21:57:19] 2026-05-05 01:56:23,786 | INFO     | [job] retrieve thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:23,787 | INFO     | [job] job monitor thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:24,144 | INFO     | [payload] validate_post thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:24,173 | INFO     | [payload] failed_post thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:24,190 | INFO     | all job control threads have been joined
[2026-05-04 21:57:19] 2026-05-05 01:56:24,253 | INFO     | [data] control thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:24,539 | INFO     | [payload] control thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:24,586 | INFO     | [data] copytool_in thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:24,603 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:24,605 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:24,605 | INFO     | [job] validate thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:24,606 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:24,825 | INFO     | [data] copytool_out thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:25,103 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:25,197 | INFO     | [job] control thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:25,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 21:57:19] 2026-05-05 01:56:26,730 | INFO     | [job] queue monitor thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:27,702 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 21:57:19] 2026-05-05 01:56:54,137 | INFO     | PID=828244 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-04 21:57:19] 2026-05-05 01:56:54,138 | INFO     | .. there are 27 such processes running
[2026-05-04 21:57:19] 2026-05-05 01:56:54,140 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 21:57:19] 2026-05-05 01:56:54,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 21:57:19] 2026-05-05 01:56:54,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 21:57:19] 2026-05-05 01:57:12,543 | INFO     | [monitor] cgroup control has ended
[2026-05-04 21:57:19] 2026-05-05 01:57:14,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698907211584)>', '<ExcThread(monitor, started 140698523248384)>']
[2026-05-04 21:57:19] 2026-05-05 01:57:15,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 21:57:19] 2026-05-05 01:57:15,252 | INFO     | [monitor] control thread has ended
[2026-05-04 21:57:19] 2026-05-05 01:57:19,378 | INFO     | all workflow threads have been joined
[2026-05-04 21:57:19] 2026-05-05 01:57:19,378 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 21:57:19] 2026-05-05 01:57:19,379 | INFO     | traces error code: 0
[2026-05-04 21:57:19] 2026-05-05 01:57:19,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 21:57:19] 2026-05-05 01:57:19,588 [wrapper] ==== pilot stdout END ====
[2026-05-04 21:57:19] 2026-05-05 01:57:19,591 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 21:57:19] 2026-05-05 01:57:19,594 [wrapper] pilotpid: 828244
[2026-05-04 21:57:19] 2026-05-05 01:57:19,596 [wrapper] Pilot exit status: 0
[2026-05-04 21:57:19] 2026-05-05 01:57:19,607 [wrapper] pandaids: 7120561248 7120561248
[2026-05-04 21:57:19] 2026-05-05 01:57:19,686 [wrapper] cleanup supervisor_pilot 1349229 828245
[2026-05-04 21:57:19] 2026-05-05 01:57:19,690 [wrapper] Test setup, not cleaning
[2026-05-04 21:57:19] 2026-05-05 01:57:19,693 [wrapper] apfmon messages muted
[2026-05-04 21:57:19] 2026-05-05 01:57:19,696 [wrapper] ==== wrapper stdout END ====
[2026-05-04 21:57:19] 2026-05-05 01:57:19,700 [wrapper] ==== wrapper stderr END ====
[2026-05-04 21:57:19]  *** Error codes and diagnostics ***
[2026-05-04 21:57:19]     "exeErrorCode": 0,
[2026-05-04 21:57:19]     "pilotErrorCode": 0,
[2026-05-04 21:57:19]  *** Listing of results directory ***
[2026-05-04 21:57:19] total 1046272
[2026-05-04 21:57:19] drwx------. 5 boincer umatlas      4096 Apr 22 05:13 pilot3
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas    683926 May  1 11:14 pilot3.tar.gz
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas      5631 May  1 11:15 queuedata.json
[2026-05-04 21:57:19] -rwx------. 1 boincer umatlas     36322 May  1 11:16 runpilot2-wrapper.sh
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas       100 May  4 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 21:57:19] -rwxr-xr-x. 1 boincer umatlas      7986 May  4 13:21 run_atlas
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas       105 May  4 13:21 job.xml
[2026-05-04 21:57:19] -rw-r--r--. 3 boincer umatlas 439783131 May  4 13:21 EVNT.46373187._000180.pool.root.1
[2026-05-04 21:57:19] -rw-r--r--. 3 boincer umatlas 439783131 May  4 13:21 ATLAS.root_0
[2026-05-04 21:57:19] -rw-r--r--. 2 boincer umatlas    697429 May  4 13:21 input.tar.gz
[2026-05-04 21:57:19] -rw-r--r--. 2 boincer umatlas     15667 May  4 13:21 start_atlas.sh
[2026-05-04 21:57:19] drwxrwx--x. 2 boincer umatlas      4096 May  4 13:21 shared
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas         0 May  4 13:21 boinc_lockfile
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas      2595 May  4 19:11 pandaJob.out
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas        57 May  4 19:11 setup.sh.local
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas   1002597 May  4 19:12 agis_schedconf.cvmfs.json
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas   1505918 May  4 19:12 agis_ddmendpoints.agis.ALL.json
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas       440 May  4 19:12 workernode_map.json
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas      6574 May  4 21:54 init_data.xml
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas 185109019 May  4 21:55 HITS.49718416._020115.pool.root.1
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas       489 May  4 21:55 boinc_task_state.xml
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas      1066 May  4 21:56 memory_monitor_summary.json
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas    403448 May  4 21:56 log.49718416._020115.job.log.tgz.1
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas      6450 May  4 21:56 heartbeat_new.json
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas      6341 May  4 21:56 heartbeat.json
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas        96 May  4 21:56 pilot_heartbeat.json
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas        28 May  4 21:57 wrapper_checkpoint.txt
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas      8192 May  4 21:57 boinc_mmap_file
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas      4822 May  4 21:57 pilotlog.txt
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas    878325 May  4 21:57 log.49718416._020115.job.log.1
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas       357 May  4 21:57 output.list
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas       410 May  4 21:57 runtime_log
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas   1300480 May  4 21:57 result.tar.gz
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas      9041 May  4 21:57 runtime_log.err
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas       781 May  4 21:57 c3bd35e6f651.diag
[2026-05-04 21:57:19] -rw-r--r--. 1 boincer umatlas     23346 May  4 21:57 stderr.txt
[2026-05-04 21:57:19] HITS file was successfully produced:
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas 185109019 May  4 21:55 shared/HITS.pool.root.1
[2026-05-04 21:57:19]  *** Contents of shared directory: ***
[2026-05-04 21:57:19] total 612228
[2026-05-04 21:57:19] -rw-r--r--. 3 boincer umatlas 439783131 May  4 13:21 ATLAS.root_0
[2026-05-04 21:57:19] -rw-r--r--. 2 boincer umatlas    697429 May  4 13:21 input.tar.gz
[2026-05-04 21:57:19] -rw-r--r--. 2 boincer umatlas     15667 May  4 13:21 start_atlas.sh
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas 185109019 May  4 21:55 HITS.pool.root.1
[2026-05-04 21:57:19] -rw-------. 1 boincer umatlas   1300480 May  4 21:57 result.tar.gz
21:57:21 (822358): run_atlas exited; CPU time 49450.833425
21:57:21 (822358): called boinc_finish(0)

</stderr_txt>
]]>

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