Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:05:48 (571345): wrapper (7.7.26015): starting
13:05:48 (571345): wrapper: running run_atlas (--nthreads 8)
[2026-05-04 13:05:48] Arguments: --nthreads 8
[2026-05-04 13:05:48] Threads: 8
[2026-05-04 13:05:48] Checking for CVMFS
[2026-05-04 13:05:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 13:05:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 13:05:49] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 13:05:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 13:05:49] 2.13.3.0 8168 5879 116724 159206 1 220 25106727 39288832 4732 16776704 0 3275773 99.161 6198601 32631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-04 13:05:49] CVMFS is ok
[2026-05-04 13:05:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 13:05:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 13:05:49] Further information can be found at the LHC@home message board.
[2026-05-04 13:05:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 13:05:49] Checking for apptainer binary...
[2026-05-04 13:05:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 13:05:49] Running /usr/bin/apptainer --version
[2026-05-04 13:05:49] apptainer version 1.4.5-3.el9
[2026-05-04 13:05:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 13:05:49] c-210-14.aglt2.org
[2026-05-04 13:05:49] apptainer works
[2026-05-04 13:05:49] Set ATHENA_PROC_NUMBER=8
[2026-05-04 13:05:49] Set ATHENA_CORE_NUMBER=8
[2026-05-04 13:05:49] Starting ATLAS job with PandaID=7116123015
[2026-05-04 13:05:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 01:44:35]  *** The last 200 lines of the pilot log: ***
[2026-05-05 01:44:35] 2026-05-05 05:43:40,587 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-05 01:44:35] 2026-05-05 05:43:40,587 | INFO     | log transfer has been attempted: DONE
[2026-05-05 01:44:35] 2026-05-05 05:43:40,587 | INFO     | job 7116123015 has finished - writing final server update
[2026-05-05 01:44:35] 2026-05-05 05:43:40,588 | INFO     | total number of processed events: 400 (read)
[2026-05-05 01:44:35] 2026-05-05 05:43:40,603 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7116123015/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 01:44:35] 2026-05-05 05:43:40,603 | INFO     | extracted standard info from prmon json
[2026-05-05 01:44:35] 2026-05-05 05:43:40,604 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 01:44:35] 2026-05-05 05:43:40,607 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 01:44:35] 2026-05-05 05:43:40,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 01:44:35] 2026-05-05 05:43:40,634 | INFO     | fitting pss+swap vs Time
[2026-05-05 01:44:35] 2026-05-05 05:43:40,640 | INFO     | sum of square deviations: 128202806473.76616
[2026-05-05 01:44:35] 2026-05-05 05:43:40,666 | INFO     | sum of deviations: 14260900265.209404
[2026-05-05 01:44:35] 2026-05-05 05:43:40,666 | INFO     | mean x (centered): 0.0
[2026-05-05 01:44:35] 2026-05-05 05:43:40,666 | INFO     | mean y: 2592192.6818791945
[2026-05-05 01:44:35] 2026-05-05 05:43:40,666 | INFO     | intersect: 2592192.6818791945
[2026-05-05 01:44:35] 2026-05-05 05:43:40,667 | INFO     | chi2: 2.222691845439014
[2026-05-05 01:44:35] 2026-05-05 05:43:40,669 | INFO     | sum of square deviations: 125638761076.59978
[2026-05-05 01:44:35] 2026-05-05 05:43:40,699 | INFO     | sum of deviations: 61725971473.600044
[2026-05-05 01:44:35] 2026-05-05 05:43:40,700 | INFO     | mean x (centered): 0.0
[2026-05-05 01:44:35] 2026-05-05 05:43:40,700 | INFO     | mean y: 2594999.981081081
[2026-05-05 01:44:35] 2026-05-05 05:43:40,700 | INFO     | intersect: 2594999.981081081
[2026-05-05 01:44:35] 2026-05-05 05:43:40,705 | INFO     | chi2: 1.538362112132998
[2026-05-05 01:44:35] 2026-05-05 05:43:40,706 | INFO     | current chi2=1.538362112132998 (change=30.788331486898084 %)
[2026-05-05 01:44:35] 2026-05-05 05:43:40,707 | INFO     | sum of square deviations: 123109089669.17851
[2026-05-05 01:44:35] 2026-05-05 05:43:40,732 | INFO     | sum of deviations: 60042594561.39189
[2026-05-05 01:44:35] 2026-05-05 05:43:40,733 | INFO     | mean x (centered): 0.0
[2026-05-05 01:44:35] 2026-05-05 05:43:40,733 | INFO     | mean y: 2594898.5020408165
[2026-05-05 01:44:35] 2026-05-05 05:43:40,733 | INFO     | intersect: 2594898.5020408165
[2026-05-05 01:44:35] 2026-05-05 05:43:40,739 | INFO     | chi2: 1.538289152732554
[2026-05-05 01:44:35] 2026-05-05 05:43:40,739 | INFO     | current chi2=1.538289152732554 (change=0.004742667533776515 %)
[2026-05-05 01:44:35] 2026-05-05 05:43:40,739 | INFO     | right removable region: 734
[2026-05-05 01:44:35] 2026-05-05 05:43:40,740 | INFO     | sum of square deviations: 125638218538.99455
[2026-05-05 01:44:35] 2026-05-05 05:43:40,771 | INFO     | sum of deviations: -96629087907.27573
[2026-05-05 01:44:35] 2026-05-05 05:43:40,771 | INFO     | mean x (centered): 0.0
[2026-05-05 01:44:35] 2026-05-05 05:43:40,771 | INFO     | mean y: 2598766.287837838
[2026-05-05 01:44:35] 2026-05-05 05:43:40,772 | INFO     | intersect: 2598766.287837838
[2026-05-05 01:44:35] 2026-05-05 05:43:40,773 | INFO     | chi2: 0.9115642088754573
[2026-05-05 01:44:35] 2026-05-05 05:43:40,773 | INFO     | current chi2=0.9115642088754573 (change=58.98827762624873 %)
[2026-05-05 01:44:35] 2026-05-05 05:43:40,778 | INFO     | sum of square deviations: 123108049854.09033
[2026-05-05 01:44:35] 2026-05-05 05:43:40,804 | INFO     | sum of deviations: -93257839234.4204
[2026-05-05 01:44:35] 2026-05-05 05:43:40,805 | INFO     | mean x (centered): 0.0
[2026-05-05 01:44:35] 2026-05-05 05:43:40,805 | INFO     | mean y: 2598560.3578231293
[2026-05-05 01:44:35] 2026-05-05 05:43:40,805 | INFO     | intersect: 2598560.3578231293
[2026-05-05 01:44:35] 2026-05-05 05:43:40,811 | INFO     | chi2: 0.8989783465758262
[2026-05-05 01:44:35] 2026-05-05 05:43:40,811 | INFO     | current chi2=0.8989783465758262 (change=1.380688510703764 %)
[2026-05-05 01:44:35] 2026-05-05 05:43:40,811 | INFO     | left removable region: 10
[2026-05-05 01:44:35] 2026-05-05 05:43:40,812 | INFO     | sum of square deviations: 117662857635.1203
[2026-05-05 01:44:35] 2026-05-05 05:43:40,842 | INFO     | sum of deviations: -46842973139.71674
[2026-05-05 01:44:35] 2026-05-05 05:43:40,842 | INFO     | mean x (centered): 0.0
[2026-05-05 01:44:35] 2026-05-05 05:43:40,842 | INFO     | mean y: 2601379.609116022
[2026-05-05 01:44:35] 2026-05-05 05:43:40,842 | INFO     | intersect: 2601379.609116022
[2026-05-05 01:44:35] 2026-05-05 05:43:40,843 | INFO     | chi2: 0.2094185519314493
[2026-05-05 01:44:35] 2026-05-05 05:43:40,844 | INFO     | current memory leak: -0.40 B/s (using 724 data points, chi2=0.21)
[2026-05-05 01:44:35] 2026-05-05 05:43:40,845 | INFO     | could have reported an average CPU frequency of 2600 MHz (29 samples)
[2026-05-05 01:44:35] 2026-05-05 05:43:40,845 | INFO     | ..............................
[2026-05-05 01:44:35] 2026-05-05 05:43:40,845 | INFO     | . Timing measurements:
[2026-05-05 01:44:35] 2026-05-05 05:43:40,845 | INFO     | . get job = 0 s
[2026-05-05 01:44:35] 2026-05-05 05:43:40,849 | INFO     | . initial setup = 6 s
[2026-05-05 01:44:35] 2026-05-05 05:43:40,850 | INFO     | . payload setup = 7 s
[2026-05-05 01:44:35] 2026-05-05 05:43:40,850 | INFO     | . stage-in = 0 s
[2026-05-05 01:44:35] 2026-05-05 05:43:40,850 | INFO     | . payload execution = 45423 s
[2026-05-05 01:44:35] 2026-05-05 05:43:40,850 | INFO     | . stage-out = 4 s
[2026-05-05 01:44:35] 2026-05-05 05:43:40,850 | INFO     | . log creation = 1 s
[2026-05-05 01:44:35] 2026-05-05 05:43:40,850 | INFO     | ..............................
[2026-05-05 01:44:35] 2026-05-05 05:43:41,142 | INFO     | 
[2026-05-05 01:44:35] 2026-05-05 05:43:41,143 | INFO     | job summary report
[2026-05-05 01:44:35] 2026-05-05 05:43:41,143 | INFO     | --------------------------------------------------
[2026-05-05 01:44:35] 2026-05-05 05:43:41,143 | INFO     | PanDA job id: 7116123015
[2026-05-05 01:44:35] 2026-05-05 05:43:41,143 | INFO     | task id: 49820375
[2026-05-05 01:44:35] 2026-05-05 05:43:41,143 | INFO     | errors: (none)
[2026-05-05 01:44:35] 2026-05-05 05:43:41,143 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 01:44:35] 2026-05-05 05:43:41,143 | INFO     | pilot state: finished 
[2026-05-05 01:44:35] 2026-05-05 05:43:41,143 | INFO     | transexitcode: 0
[2026-05-05 01:44:35] 2026-05-05 05:43:41,143 | INFO     | exeerrorcode: 0
[2026-05-05 01:44:35] 2026-05-05 05:43:41,144 | INFO     | exeerrordiag: 
[2026-05-05 01:44:35] 2026-05-05 05:43:41,144 | INFO     | exitcode: 0
[2026-05-05 01:44:35] 2026-05-05 05:43:41,144 | INFO     | exitmsg: OK
[2026-05-05 01:44:35] 2026-05-05 05:43:41,144 | INFO     | cpuconsumptiontime: 90715 s
[2026-05-05 01:44:35] 2026-05-05 05:43:41,144 | INFO     | nevents: 400
[2026-05-05 01:44:35] 2026-05-05 05:43:41,144 | INFO     | neventsw: 0
[2026-05-05 01:44:35] 2026-05-05 05:43:41,144 | INFO     | pid: 588745
[2026-05-05 01:44:35] 2026-05-05 05:43:41,144 | INFO     | pgrp: 588745
[2026-05-05 01:44:35] 2026-05-05 05:43:41,144 | INFO     | corecount: 8
[2026-05-05 01:44:35] 2026-05-05 05:43:41,145 | INFO     | event service: False
[2026-05-05 01:44:35] 2026-05-05 05:43:41,145 | INFO     | sizes: {0: 2269780, 1: 2272266, 12: 2272266, 45435: 2317759, 45441: 2326757, 45444: 2326813, 45446: 2327135}
[2026-05-05 01:44:35] 2026-05-05 05:43:41,145 | INFO     | --------------------------------------------------
[2026-05-05 01:44:35] 2026-05-05 05:43:41,145 | INFO     | 
[2026-05-05 01:44:35] 2026-05-05 05:43:41,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-05-05 01:44:35] 2026-05-05 05:43:41,279 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,279 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,279 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,279 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,279 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,281 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 01:44:35] 2026-05-05 05:43:41,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,281 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 01:44:35] 2026-05-05 05:43:41,282 | INFO     | job 7116123015 has completed (purged errors)
[2026-05-05 01:44:35] 2026-05-05 05:43:41,282 | INFO     | overall cleanup function is called
[2026-05-05 01:44:35] 2026-05-05 05:43:42,300 | INFO     | --- collectZombieJob: --- 10, [588745]
[2026-05-05 01:44:35] 2026-05-05 05:43:42,301 | INFO     | zombie collector waiting for pid 588745
[2026-05-05 01:44:35] 2026-05-05 05:43:42,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 01:44:35] 2026-05-05 05:43:42,301 | INFO     | collected zombie processes
[2026-05-05 01:44:35] 2026-05-05 05:43:42,301 | INFO     | will attempt to kill all subprocesses of pid=588745
[2026-05-05 01:44:35] 2026-05-05 05:43:42,868 | INFO     | process IDs to be killed: [588745] (in reverse order)
[2026-05-05 01:44:35] 2026-05-05 05:43:43,053 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 01:44:35] 2026-05-05 05:43:43,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 01:44:35] 2026-05-05 05:43:43,070 | INFO     | did not find any defunct processes belonging to 588745
[2026-05-05 01:44:35] 2026-05-05 05:43:43,086 | INFO     | did not find any defunct processes belonging to 588745
[2026-05-05 01:44:35] 2026-05-05 05:43:43,086 | INFO     | Ready for new job
[2026-05-05 01:44:35] 2026-05-05 05:43:43,093 | INFO     | ***************************************
[2026-05-05 01:44:35] 2026-05-05 05:43:43,093 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 01:44:35] 2026-05-05 05:43:43,093 | INFO     | ***************************************
[2026-05-05 01:44:35] 2026-05-05 05:43:43,093 | INFO     | 
[2026-05-05 01:44:35] 2026-05-05 05:43:43,099 | INFO     | architecture information:
[2026-05-05 01:44:35] 2026-05-05 05:43:43,100 | INFO     | executing command: cat /etc/os-release
[2026-05-05 01:44:35] 2026-05-05 05:43:43,160 | INFO     | cat /etc/os-release:
[2026-05-05 01:44:35] NAME="CentOS Linux"
[2026-05-05 01:44:35] VERSION="7 (Core)"
[2026-05-05 01:44:35] ID="centos"
[2026-05-05 01:44:35] ID_LIKE="rhel fedora"
[2026-05-05 01:44:35] VERSION_ID="7"
[2026-05-05 01:44:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 01:44:35] ANSI_COLOR="0;31"
[2026-05-05 01:44:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 01:44:35] HOME_URL="https://www.centos.org/"
[2026-05-05 01:44:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 01:44:35] 
[2026-05-05 01:44:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 01:44:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 01:44:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 01:44:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 01:44:35] 
[2026-05-05 01:44:35] 2026-05-05 05:43:43,161 | INFO     | ***************************************
[2026-05-05 01:44:35] 2026-05-05 05:43:43,664 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-05-05 01:44:35] 2026-05-05 05:43:43,744 | INFO     | sufficient remaining disk space (45066747904 B)
[2026-05-05 01:44:35] 2026-05-05 05:43:43,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 01:44:35] 2026-05-05 05:43:43,744 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 01:44:35] 2026-05-05 05:43:43,744 | INFO     | update_server=False
[2026-05-05 01:44:35] 2026-05-05 05:43:43,745 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 01:44:35] 2026-05-05 05:43:43,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 01:44:35] 2026-05-05 05:43:43,769 | INFO     | all job control threads have been joined
[2026-05-05 01:44:35] 2026-05-05 05:43:43,831 | INFO     | all data control threads have been joined
[2026-05-05 01:44:35] 2026-05-05 05:43:44,239 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-05 01:44:35] 2026-05-05 05:43:44,240 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-05 01:44:35] 2026-05-05 05:43:44,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 01:44:35] 2026-05-05 05:43:44,240 | INFO     | will abort loop
[2026-05-05 01:44:35] 2026-05-05 05:43:44,750 | INFO     | [job] retrieve thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:44,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 01:44:35] 2026-05-05 05:43:44,763 | INFO     | all payload control threads have been joined
[2026-05-05 01:44:35] 2026-05-05 05:43:44,777 | INFO     | [job] control thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:44,836 | INFO     | [data] control thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:44,977 | INFO     | [job] validate thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:45,131 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:45,265 | INFO     | [job] job monitor thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:45,475 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:45,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:45,576 | INFO     | [payload] failed_post thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:45,755 | INFO     | [data] copytool_out thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:45,768 | INFO     | [data] copytool_in thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:45,769 | INFO     | [payload] control thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:45,823 | INFO     | [payload] validate_post thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:46,057 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:46,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 01:44:35] 2026-05-05 05:43:47,163 | INFO     | [job] queue monitor thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:43:48,776 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 01:44:35] 2026-05-05 05:44:14,265 | INFO     | PID=575058 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-05 01:44:35] 2026-05-05 05:44:14,265 | INFO     | .. there are 7 such processes running
[2026-05-05 01:44:35] 2026-05-05 05:44:14,266 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 01:44:35] 2026-05-05 05:44:14,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 01:44:35] 2026-05-05 05:44:14,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 01:44:35] 2026-05-05 05:44:28,198 | INFO     | [monitor] cgroup control has ended
[2026-05-05 01:44:35] 2026-05-05 05:44:28,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139835751966528)>', '<ExcThread(monitor, started 139835377432320)>']
[2026-05-05 01:44:35] 2026-05-05 05:44:29,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 01:44:35] 2026-05-05 05:44:29,358 | INFO     | [monitor] control thread has ended
[2026-05-05 01:44:35] 2026-05-05 05:44:33,762 | INFO     | all workflow threads have been joined
[2026-05-05 01:44:35] 2026-05-05 05:44:33,763 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 01:44:35] 2026-05-05 05:44:33,763 | INFO     | traces error code: 0
[2026-05-05 01:44:35] 2026-05-05 05:44:33,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 01:44:35] 2026-05-05 05:44:34,169 [wrapper] ==== pilot stdout END ====
[2026-05-05 01:44:35] 2026-05-05 05:44:34,228 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 01:44:35] 2026-05-05 05:44:34,323 [wrapper] pilotpid: 575058
[2026-05-05 01:44:35] 2026-05-05 05:44:34,377 [wrapper] Pilot exit status: 0
[2026-05-05 01:44:35] 2026-05-05 05:44:34,527 [wrapper] pandaids: 7116123015
[2026-05-05 01:44:35] 2026-05-05 05:44:34,575 [wrapper] cleanup supervisor_pilot 1718252 575059
[2026-05-05 01:44:35] 2026-05-05 05:44:34,578 [wrapper] Test setup, not cleaning
[2026-05-05 01:44:35] 2026-05-05 05:44:34,606 [wrapper] apfmon messages muted
[2026-05-05 01:44:35] 2026-05-05 05:44:34,622 [wrapper] ==== wrapper stdout END ====
[2026-05-05 01:44:35] 2026-05-05 05:44:34,642 [wrapper] ==== wrapper stderr END ====
[2026-05-05 01:44:35]  *** Error codes and diagnostics ***
[2026-05-05 01:44:35]     "exeErrorCode": 0,
[2026-05-05 01:44:35]     "pilotErrorCode": 0,
[2026-05-05 01:44:35]  *** Listing of results directory ***
[2026-05-05 01:44:35] total 2472692
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas       5631 Apr 26 11:53 queuedata.json
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas     683926 Apr 26 11:53 pilot3.tar.gz
[2026-05-05 01:44:35] -rwx------. 1 boincer umatlas      36322 Apr 26 11:53 runpilot2-wrapper.sh
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas        100 May  4 13:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 01:44:35] -rwxr-xr-x. 1 boincer umatlas       7986 May  4 13:05 run_atlas
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas        105 May  4 13:05 job.xml
[2026-05-05 01:44:35] -rw-r--r--. 2 boincer umatlas 2239981223 May  4 13:05 EVNT.49820373._000027.pool.root.1
[2026-05-05 01:44:35] -rw-r--r--. 2 boincer umatlas      15667 May  4 13:05 start_atlas.sh
[2026-05-05 01:44:35] drwxrwx--x. 2 boincer umatlas       4096 May  4 13:05 shared
[2026-05-05 01:44:35] -rw-r--r--. 2 boincer umatlas     697416 May  4 13:05 input.tar.gz
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas          0 May  4 13:05 boinc_lockfile
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas       2584 May  4 13:05 pandaJob.out
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas         57 May  4 13:05 setup.sh.local
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas    1002539 May  4 13:05 agis_schedconf.cvmfs.json
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas        442 May  4 13:06 workernode_map.json
[2026-05-05 01:44:35] drwx------. 5 boincer umatlas       4096 May  4 13:06 pilot3
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas       6574 May  5 01:36 init_data.xml
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas  278781651 May  5 01:41 HITS.49820375._014232.pool.root.1
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas        489 May  5 01:42 boinc_task_state.xml
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas       1053 May  5 01:43 memory_monitor_summary.json
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas    1505918 May  5 01:43 agis_ddmendpoints.agis.ALL.json
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas     778427 May  5 01:43 log.49820375._014232.job.log.tgz.1
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas       6430 May  5 01:43 heartbeat_new.json
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas       6321 May  5 01:43 heartbeat.json
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas         95 May  5 01:43 pilot_heartbeat.json
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas       8192 May  5 01:44 boinc_mmap_file
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas         28 May  5 01:44 wrapper_checkpoint.txt
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas       5007 May  5 01:44 pilotlog.txt
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas    3787921 May  5 01:44 log.49820375._014232.job.log.1
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas        357 May  5 01:44 output.list
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas        410 May  5 01:44 runtime_log
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas    4587520 May  5 01:44 result.tar.gz
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas       8965 May  5 01:44 runtime_log.err
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas        661 May  5 01:44 34f65acd4ba8.diag
[2026-05-05 01:44:35] -rw-r--r--. 1 boincer umatlas      21022 May  5 01:44 stderr.txt
[2026-05-05 01:44:35] HITS file was successfully produced:
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas 278781651 May  5 01:41 shared/HITS.pool.root.1
[2026-05-05 01:44:35]  *** Contents of shared directory: ***
[2026-05-05 01:44:35] total 2464920
[2026-05-05 01:44:35] -rw-r--r--. 2 boincer umatlas 2239981223 May  4 13:05 ATLAS.root_0
[2026-05-05 01:44:35] -rw-r--r--. 2 boincer umatlas      15667 May  4 13:05 start_atlas.sh
[2026-05-05 01:44:35] -rw-r--r--. 2 boincer umatlas     697416 May  4 13:05 input.tar.gz
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas  278781651 May  5 01:41 HITS.pool.root.1
[2026-05-05 01:44:35] -rw-------. 1 boincer umatlas    4587520 May  5 01:44 result.tar.gz
01:44:36 (571345): run_atlas exited; CPU time 91949.148860
01:44:36 (571345): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN