Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:03:11 (3588160): wrapper (7.7.26015): starting
13:03:11 (3588160): wrapper: running run_atlas (--nthreads 8)
[2026-05-04 13:03:11] Arguments: --nthreads 8
[2026-05-04 13:03:11] Threads: 8
[2026-05-04 13:03:11] Checking for CVMFS
[2026-05-04 13:03:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 13:03:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 13:03:12] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 13:03:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 13:03:12] 2.13.3.0 11946 5956 138412 159206 3 668 32570826 32935936 16002 16776704 0 19866375 99.586 25738903 30955 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-04 13:03:12] CVMFS is ok
[2026-05-04 13:03:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 13:03:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 13:03:12] Further information can be found at the LHC@home message board.
[2026-05-04 13:03:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 13:03:12] Checking for apptainer binary...
[2026-05-04 13:03:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 13:03:12] Running /usr/bin/apptainer --version
[2026-05-04 13:03:12] apptainer version 1.4.5-3.el9
[2026-05-04 13:03:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 13:03:12] c-4-37.aglt2.org
[2026-05-04 13:03:12] apptainer works
[2026-05-04 13:03:12] Set ATHENA_PROC_NUMBER=8
[2026-05-04 13:03:12] Set ATHENA_CORE_NUMBER=8
[2026-05-04 13:03:12] Starting ATLAS job with PandaID=7116122256
[2026-05-04 13:03:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 22:38:29]  *** The last 200 lines of the pilot log: ***
[2026-05-04 22:38:29] 2026-05-05 01:18:34,366 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 22:38:29] 2026-05-05 01:18:34,366 | INFO     | log transfer has been attempted: DONE
[2026-05-04 22:38:29] 2026-05-05 01:18:34,366 | INFO     | job 7116122256 has finished - writing final server update
[2026-05-04 22:38:29] 2026-05-05 01:18:34,367 | INFO     | total number of processed events: 400 (read)
[2026-05-04 22:38:29] 2026-05-05 01:18:34,468 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7116122256/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 22:38:29] 2026-05-05 01:18:34,469 | INFO     | extracted standard info from prmon json
[2026-05-04 22:38:29] 2026-05-05 01:18:34,469 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 22:38:29] 2026-05-05 01:18:34,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 22:38:29] 2026-05-05 01:18:34,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 22:38:29] 2026-05-05 01:18:34,495 | INFO     | fitting pss+swap vs Time
[2026-05-04 22:38:29] 2026-05-05 01:18:34,501 | INFO     | sum of square deviations: 35816570971.75349
[2026-05-04 22:38:29] 2026-05-05 01:18:34,563 | INFO     | sum of deviations: -125838052897.66129
[2026-05-04 22:38:29] 2026-05-05 01:18:34,563 | INFO     | mean x (centered): 0.0
[2026-05-04 22:38:29] 2026-05-05 01:18:34,563 | INFO     | mean y: 2597605.8952772073
[2026-05-04 22:38:29] 2026-05-05 01:18:34,563 | INFO     | intersect: 2597605.8952772073
[2026-05-04 22:38:29] 2026-05-05 01:18:34,564 | INFO     | chi2: 3.2237272296786195
[2026-05-04 22:38:29] 2026-05-05 01:18:34,605 | INFO     | sum of square deviations: 34724833076.688774
[2026-05-04 22:38:29] 2026-05-05 01:18:34,651 | INFO     | sum of deviations: -58542973207.02485
[2026-05-04 22:38:29] 2026-05-05 01:18:34,651 | INFO     | mean x (centered): 0.0
[2026-05-04 22:38:29] 2026-05-05 01:18:34,651 | INFO     | mean y: 2606948.877593361
[2026-05-04 22:38:29] 2026-05-05 01:18:34,651 | INFO     | intersect: 2606948.877593361
[2026-05-04 22:38:29] 2026-05-05 01:18:34,656 | INFO     | chi2: 1.7194279865096949
[2026-05-04 22:38:29] 2026-05-05 01:18:34,657 | INFO     | current chi2=1.7194279865096949 (change=46.66335381355734 %)
[2026-05-04 22:38:29] 2026-05-05 01:18:34,657 | INFO     | sum of square deviations: 33655426001.916054
[2026-05-04 22:38:29] 2026-05-05 01:18:34,672 | INFO     | sum of deviations: -58598114733.490524
[2026-05-04 22:38:29] 2026-05-05 01:18:34,672 | INFO     | mean x (centered): 0.0
[2026-05-04 22:38:29] 2026-05-05 01:18:34,672 | INFO     | mean y: 2606941.0188679243
[2026-05-04 22:38:29] 2026-05-05 01:18:34,672 | INFO     | intersect: 2606941.0188679243
[2026-05-04 22:38:29] 2026-05-05 01:18:34,673 | INFO     | chi2: 1.7182736059656625
[2026-05-04 22:38:29] 2026-05-05 01:18:34,673 | INFO     | current chi2=1.7182736059656625 (change=0.06713747554939407 %)
[2026-05-04 22:38:29] 2026-05-05 01:18:34,673 | INFO     | right removable region: 476
[2026-05-04 22:38:29] 2026-05-05 01:18:34,674 | INFO     | sum of square deviations: 34724621406.68875
[2026-05-04 22:38:29] 2026-05-05 01:18:34,688 | INFO     | sum of deviations: -206682204117.90067
[2026-05-04 22:38:29] 2026-05-05 01:18:34,688 | INFO     | mean x (centered): 0.0
[2026-05-04 22:38:29] 2026-05-05 01:18:34,688 | INFO     | mean y: 2608847.989626556
[2026-05-04 22:38:29] 2026-05-05 01:18:34,688 | INFO     | intersect: 2608847.989626556
[2026-05-04 22:38:29] 2026-05-05 01:18:34,689 | INFO     | chi2: 1.7512260206282155
[2026-05-04 22:38:29] 2026-05-05 01:18:34,689 | INFO     | current chi2=1.7512260206282155 (change=45.67697897930405 %)
[2026-05-04 22:38:29] 2026-05-05 01:18:34,690 | INFO     | sum of square deviations: 33655090866.57031
[2026-05-04 22:38:29] 2026-05-05 01:18:34,716 | INFO     | sum of deviations: -210393825470.73373
[2026-05-04 22:38:29] 2026-05-05 01:18:34,717 | INFO     | mean x (centered): 0.0
[2026-05-04 22:38:29] 2026-05-05 01:18:34,717 | INFO     | mean y: 2609369.071278826
[2026-05-04 22:38:29] 2026-05-05 01:18:34,717 | INFO     | intersect: 2609369.071278826
[2026-05-04 22:38:29] 2026-05-05 01:18:34,718 | INFO     | chi2: 1.72563858580196
[2026-05-04 22:38:29] 2026-05-05 01:18:34,718 | INFO     | current chi2=1.72563858580196 (change=1.461115499932814 %)
[2026-05-04 22:38:29] 2026-05-05 01:18:34,718 | INFO     | left removable region: 10
[2026-05-04 22:38:29] 2026-05-05 01:18:34,723 | INFO     | sum of square deviations: 31380243208.03472
[2026-05-04 22:38:29] 2026-05-05 01:18:34,733 | INFO     | sum of deviations: -142636973488.99564
[2026-05-04 22:38:29] 2026-05-05 01:18:34,733 | INFO     | mean x (centered): 0.0
[2026-05-04 22:38:29] 2026-05-05 01:18:34,733 | INFO     | mean y: 2619180.654506438
[2026-05-04 22:38:29] 2026-05-05 01:18:34,733 | INFO     | intersect: 2619180.654506438
[2026-05-04 22:38:29] 2026-05-05 01:18:34,734 | INFO     | chi2: 0.19915261176441368
[2026-05-04 22:38:29] 2026-05-05 01:18:34,739 | INFO     | current memory leak: -4.55 B/s (using 466 data points, chi2=0.20)
[2026-05-04 22:38:29] 2026-05-05 01:18:34,739 | INFO     | could have reported an average CPU frequency of 2599 MHz (20 samples)
[2026-05-04 22:38:29] 2026-05-05 01:18:34,740 | INFO     | ..............................
[2026-05-04 22:38:29] 2026-05-05 01:18:34,740 | INFO     | . Timing measurements:
[2026-05-04 22:38:29] 2026-05-05 01:18:34,740 | INFO     | . get job = 0 s
[2026-05-04 22:38:29] 2026-05-05 01:18:34,740 | INFO     | . initial setup = 7 s
[2026-05-04 22:38:29] 2026-05-05 01:18:34,740 | INFO     | . payload setup = 12 s
[2026-05-04 22:38:29] 2026-05-05 01:18:34,740 | INFO     | . stage-in = 0 s
[2026-05-04 22:38:29] 2026-05-05 01:18:34,740 | INFO     | . payload execution = 29665 s
[2026-05-04 22:38:29] 2026-05-05 01:18:34,740 | INFO     | . stage-out = 7 s
[2026-05-04 22:38:29] 2026-05-05 01:18:34,741 | INFO     | . log creation = 1 s
[2026-05-04 22:38:29] 2026-05-05 01:18:34,741 | INFO     | ..............................
[2026-05-04 22:38:29] 2026-05-05 01:18:35,872 | INFO     | 
[2026-05-04 22:38:29] 2026-05-05 01:18:35,872 | INFO     | job summary report
[2026-05-04 22:38:29] 2026-05-05 01:18:35,872 | INFO     | --------------------------------------------------
[2026-05-04 22:38:29] 2026-05-05 01:18:35,872 | INFO     | PanDA job id: 7116122256
[2026-05-04 22:38:29] 2026-05-05 01:18:35,872 | INFO     | task id: 49820375
[2026-05-04 22:38:29] 2026-05-05 01:18:35,873 | INFO     | errors: (none)
[2026-05-04 22:38:29] 2026-05-05 01:18:35,873 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 22:38:29] 2026-05-05 01:18:35,873 | INFO     | pilot state: finished 
[2026-05-04 22:38:29] 2026-05-05 01:18:35,873 | INFO     | transexitcode: 0
[2026-05-04 22:38:29] 2026-05-05 01:18:35,873 | INFO     | exeerrorcode: 0
[2026-05-04 22:38:29] 2026-05-05 01:18:35,873 | INFO     | exeerrordiag: 
[2026-05-04 22:38:29] 2026-05-05 01:18:35,873 | INFO     | exitcode: 0
[2026-05-04 22:38:29] 2026-05-05 01:18:35,873 | INFO     | exitmsg: OK
[2026-05-04 22:38:29] 2026-05-05 01:18:35,873 | INFO     | cpuconsumptiontime: 86394 s
[2026-05-04 22:38:29] 2026-05-05 01:18:35,873 | INFO     | nevents: 400
[2026-05-04 22:38:29] 2026-05-05 01:18:35,874 | INFO     | neventsw: 0
[2026-05-04 22:38:29] 2026-05-05 01:18:35,874 | INFO     | pid: 3616281
[2026-05-04 22:38:29] 2026-05-05 01:18:35,874 | INFO     | pgrp: 3616281
[2026-05-04 22:38:29] 2026-05-05 01:18:35,874 | INFO     | corecount: 8
[2026-05-04 22:38:29] 2026-05-05 01:18:35,874 | INFO     | event service: False
[2026-05-04 22:38:29] 2026-05-05 01:18:35,874 | INFO     | sizes: {0: 2272238, 11: 2272238, 29682: 2310087, 29683: 2310086, 29690: 2319140, 29693: 2319196, 29694: 2319518}
[2026-05-04 22:38:29] 2026-05-05 01:18:35,874 | INFO     | --------------------------------------------------
[2026-05-04 22:38:29] 2026-05-05 01:18:35,874 | INFO     | 
[2026-05-04 22:38:29] 2026-05-05 01:18:35,875 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-05-04 22:38:29] 2026-05-05 01:18:36,074 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,074 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,074 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,075 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,076 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 22:38:29] 2026-05-05 01:18:36,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,076 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 22:38:29] 2026-05-05 01:18:36,077 | INFO     | job 7116122256 has completed (purged errors)
[2026-05-04 22:38:29] 2026-05-05 01:18:36,077 | INFO     | overall cleanup function is called
[2026-05-04 22:38:29] 2026-05-05 01:18:37,078 | INFO     | PID=3596236 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-04 22:38:29] 2026-05-05 01:18:37,078 | INFO     | .. there are 27 such processes running
[2026-05-04 22:38:29] 2026-05-05 01:18:37,134 | INFO     | --- collectZombieJob: --- 10, [3616281]
[2026-05-04 22:38:29] 2026-05-05 01:18:37,134 | INFO     | zombie collector waiting for pid 3616281
[2026-05-04 22:38:29] 2026-05-05 01:18:37,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 22:38:29] 2026-05-05 01:18:37,134 | INFO     | collected zombie processes
[2026-05-04 22:38:29] 2026-05-05 01:18:37,134 | INFO     | will attempt to kill all subprocesses of pid=3616281
[2026-05-04 22:38:29] 2026-05-05 01:18:37,895 | INFO     | process IDs to be killed: [3616281] (in reverse order)
[2026-05-04 22:38:29] 2026-05-05 01:18:38,331 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 22:38:29] 2026-05-05 01:18:38,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 22:38:29] 2026-05-05 01:18:38,365 | INFO     | did not find any defunct processes belonging to 3616281
[2026-05-04 22:38:29] 2026-05-05 01:18:38,391 | INFO     | did not find any defunct processes belonging to 3616281
[2026-05-04 22:38:29] 2026-05-05 01:18:38,396 | INFO     | Ready for new job
[2026-05-04 22:38:29] 2026-05-05 01:18:38,398 | INFO     | ***************************************
[2026-05-04 22:38:29] 2026-05-05 01:18:38,398 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 22:38:29] 2026-05-05 01:18:38,399 | INFO     | ***************************************
[2026-05-04 22:38:29] 2026-05-05 01:18:38,399 | INFO     | 
[2026-05-04 22:38:29] 2026-05-05 01:18:38,405 | INFO     | architecture information:
[2026-05-04 22:38:29] 2026-05-05 01:18:38,405 | INFO     | executing command: cat /etc/os-release
[2026-05-04 22:38:29] 2026-05-05 01:18:38,547 | INFO     | cat /etc/os-release:
[2026-05-04 22:38:29] NAME="CentOS Linux"
[2026-05-04 22:38:29] VERSION="7 (Core)"
[2026-05-04 22:38:29] ID="centos"
[2026-05-04 22:38:29] ID_LIKE="rhel fedora"
[2026-05-04 22:38:29] VERSION_ID="7"
[2026-05-04 22:38:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 22:38:29] ANSI_COLOR="0;31"
[2026-05-04 22:38:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 22:38:29] HOME_URL="https://www.centos.org/"
[2026-05-04 22:38:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 22:38:29] 
[2026-05-04 22:38:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 22:38:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 22:38:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 22:38:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 22:38:29] 
[2026-05-04 22:38:29] 2026-05-05 01:18:38,548 | INFO     | ***************************************
[2026-05-04 22:38:29] 2026-05-05 01:18:39,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-05-04 22:38:29] 2026-05-05 01:18:39,191 | INFO     | sufficient remaining disk space (67755835392 B)
[2026-05-04 22:38:29] 2026-05-05 01:18:39,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 22:38:29] 2026-05-05 01:18:39,192 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 22:38:29] 2026-05-05 01:18:39,192 | INFO     | update_server=False
[2026-05-04 22:38:29] 2026-05-05 01:18:39,192 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 22:38:29] 2026-05-05 01:18:39,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 22:38:29] 2026-05-05 01:18:39,204 | INFO     | aborting loop
[2026-05-04 22:38:29] 2026-05-05 01:18:39,951 | INFO     | all job control threads have been joined
[2026-05-04 22:38:29] 2026-05-05 01:18:40,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 22:38:29] 2026-05-05 01:18:40,153 | INFO     | all data control threads have been joined
[2026-05-04 22:38:29] 2026-05-05 01:18:40,198 | INFO     | [job] retrieve thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:40,206 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:40,227 | INFO     | [job] job monitor thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:40,262 | INFO     | [payload] validate_post thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:40,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 22:38:29] 2026-05-05 01:18:40,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 22:38:29] 2026-05-05 01:18:40,595 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:40,630 | INFO     | all payload control threads have been joined
[2026-05-04 22:38:29] 2026-05-05 01:18:40,643 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:40,959 | INFO     | [job] control thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:41,158 | INFO     | [data] control thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:41,233 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:41,235 | INFO     | [data] copytool_in thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:41,273 | INFO     | [payload] failed_post thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:41,394 | INFO     | [job] validate thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:41,586 | INFO     | [job] queue monitor thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:41,636 | INFO     | [payload] control thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:42,035 | INFO     | [data] copytool_out thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:18:44,413 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 22:38:29] 2026-05-05 01:19:11,672 | INFO     | PID=3596236 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 22:38:29] 2026-05-05 01:19:11,672 | INFO     | .. there are 27 such processes running
[2026-05-04 22:38:29] 2026-05-05 01:19:11,672 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 22:38:29] 2026-05-05 01:19:11,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 22:38:29] 2026-05-05 01:19:11,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 22:38:29] 2026-05-05 01:19:26,642 | INFO     | [monitor] cgroup control has ended
[2026-05-04 22:38:29] 2026-05-05 01:19:28,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139987185985344)>', '<ExcThread(monitor, started 139986825352960)>']
[2026-05-04 22:38:29] 2026-05-05 01:19:28,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 22:38:29] 2026-05-05 01:19:28,812 | INFO     | [monitor] control thread has ended
[2026-05-04 22:38:29] 2026-05-05 01:19:33,228 | INFO     | all workflow threads have been joined
[2026-05-04 22:38:29] 2026-05-05 01:19:33,228 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 22:38:29] 2026-05-05 01:19:33,228 | INFO     | traces error code: 0
[2026-05-04 22:38:29] 2026-05-05 01:19:33,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 22:38:29] 2026-05-05 01:19:34,160 [wrapper] ==== pilot stdout END ====
[2026-05-04 22:38:29] 2026-05-05 01:19:34,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 22:38:29] 2026-05-05 01:19:34,208 [wrapper] pilotpid: 3596236
[2026-05-04 22:38:29] 2026-05-05 01:19:34,213 [wrapper] Pilot exit status: 0
[2026-05-04 22:38:29] 2026-05-05 01:19:34,264 [wrapper] pandaids: 7116122256
[2026-05-04 22:38:29] 2026-05-05 01:19:34,699 [wrapper] cleanup supervisor_pilot 1231569 3596237
[2026-05-04 22:38:29] 2026-05-05 01:19:34,725 [wrapper] Test setup, not cleaning
[2026-05-04 22:38:29] 2026-05-05 01:19:34,736 [wrapper] apfmon messages muted
[2026-05-04 22:38:29] 2026-05-05 01:19:34,753 [wrapper] ==== wrapper stdout END ====
[2026-05-04 22:38:29] 2026-05-05 01:19:34,779 [wrapper] ==== wrapper stderr END ====
[2026-05-04 22:38:29]  *** Error codes and diagnostics ***
[2026-05-04 22:38:29]     "exeErrorCode": 0,
[2026-05-04 22:38:29]     "pilotErrorCode": 0,
[2026-05-04 22:38:29]  *** Listing of results directory ***
[2026-05-04 22:38:29] total 2436464
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas       5631 Apr 26 11:53 queuedata.json
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas     683926 Apr 26 11:53 pilot3.tar.gz
[2026-05-04 22:38:29] -rwx------. 1 boincer umatlas      36322 Apr 26 11:53 runpilot2-wrapper.sh
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas        100 May  4 13:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 22:38:29] -rwxr-xr-x. 1 boincer umatlas       7986 May  4 13:03 run_atlas
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas        105 May  4 13:03 job.xml
[2026-05-04 22:38:29] -rw-r--r--. 2 boincer umatlas 2215161157 May  4 13:03 EVNT.49820373._000026.pool.root.1
[2026-05-04 22:38:29] -rw-r--r--. 2 boincer umatlas      15667 May  4 13:03 start_atlas.sh
[2026-05-04 22:38:29] drwxrwx--x. 2 boincer umatlas       4096 May  4 13:03 shared
[2026-05-04 22:38:29] -rw-r--r--. 2 boincer umatlas     697426 May  4 13:03 input.tar.gz
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas          0 May  4 13:03 boinc_lockfile
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas       2584 May  4 13:03 pandaJob.out
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas         57 May  4 13:03 setup.sh.local
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas    1002539 May  4 13:03 agis_schedconf.cvmfs.json
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas        433 May  4 13:03 workernode_map.json
[2026-05-04 22:38:29] drwx------. 5 boincer umatlas       4096 May  4 13:03 pilot3
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas  269774922 May  4 21:16 HITS.49820375._013825.pool.root.1
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas        489 May  4 21:17 boinc_task_state.xml
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas       1054 May  4 21:18 memory_monitor_summary.json
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas    1505918 May  4 21:18 agis_ddmendpoints.agis.ALL.json
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas         95 May  4 21:18 pilot_heartbeat.json
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas     577935 May  4 21:18 log.49820375._013825.job.log.tgz.1
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas       6420 May  4 21:18 heartbeat_new.json
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas       6311 May  4 21:18 heartbeat.json
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas       4823 May  4 21:19 pilotlog.txt
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas    2355171 May  4 21:19 log.49820375._013825.job.log.1
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas        357 May  4 21:19 output.list
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas        410 May  4 21:19 runtime_log
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas    2949120 May  4 21:19 result.tar.gz
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas       8955 May  4 21:19 runtime_log.err
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas        660 May  4 21:19 34ea95543b25.diag
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas       6576 May  4 22:38 init_data.xml
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas       8192 May  4 22:38 boinc_mmap_file
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas         28 May  4 22:38 wrapper_checkpoint.txt
[2026-05-04 22:38:29] -rw-r--r--. 1 boincer umatlas      21135 May  4 22:38 stderr.txt
[2026-05-04 22:38:29] HITS file was successfully produced:
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas 269774922 May  4 21:16 shared/HITS.pool.root.1
[2026-05-04 22:38:29]  *** Contents of shared directory: ***
[2026-05-04 22:38:29] total 2430288
[2026-05-04 22:38:29] -rw-r--r--. 2 boincer umatlas 2215161157 May  4 13:03 ATLAS.root_0
[2026-05-04 22:38:29] -rw-r--r--. 2 boincer umatlas      15667 May  4 13:03 start_atlas.sh
[2026-05-04 22:38:29] -rw-r--r--. 2 boincer umatlas     697426 May  4 13:03 input.tar.gz
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas  269774922 May  4 21:16 HITS.pool.root.1
[2026-05-04 22:38:29] -rw-------. 1 boincer umatlas    2949120 May  4 21:19 result.tar.gz
22:38:31 (3588160): run_atlas exited; CPU time 87287.369487
22:38:31 (3588160): called boinc_finish(0)

</stderr_txt>
]]>

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