Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:30:06 (1314537): wrapper (7.7.26015): starting
03:30:06 (1314537): wrapper: running run_atlas (--nthreads 4)
[2026-05-06 03:30:06] Arguments: --nthreads 4
[2026-05-06 03:30:06] Threads: 4
[2026-05-06 03:30:06] Checking for CVMFS
[2026-05-06 03:30:06] No cvmfs_config command found, will try listing directly
[2026-05-06 03:30:06] CVMFS is ok
[2026-05-06 03:30:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-06 03:30:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-06 03:30:06] Further information can be found at the LHC@home message board.
[2026-05-06 03:30:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-06 03:30:06] Checking for apptainer binary...
[2026-05-06 03:30:06] which: no apptainer in ((null))
[2026-05-06 03:30:06] apptainer is not installed, using version from CVMFS
[2026-05-06 03:30:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-06 03:30:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-05-06 03:30:06] apptainer works
[2026-05-06 03:30:06] Set ATHENA_PROC_NUMBER=4
[2026-05-06 03:30:06] Set ATHENA_CORE_NUMBER=4
[2026-05-06 03:30:06] Starting ATLAS job with PandaID=7128398378
[2026-05-06 03:30:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-06 05:03:25]  *** The last 200 lines of the pilot log: ***
[2026-05-06 05:03:25]  filetype=log
[2026-05-06 05:03:25]  guid=d90710fa-9a35-4482-86c1-270d066cfada
[2026-05-06 05:03:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-06 05:03:25]  is_altstaged=None
[2026-05-06 05:03:25]  is_tar=False
[2026-05-06 05:03:25]  lfn=log.50011096._001310.job.log.tgz.1
[2026-05-06 05:03:25]  mtime=0
[2026-05-06 05:03:25]  protocol_id=None
[2026-05-06 05:03:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-06 05:03:25]  replicas=None
[2026-05-06 05:03:25]  scope=mc23_13p6TeV
[2026-05-06 05:03:25]  status=None
[2026-05-06 05:03:25]  status_code=0
[2026-05-06 05:03:25]  storage_token=
[2026-05-06 05:03:25]  surl=/var/lib/boinc/var/slot72/slots/0/PanDA_Pilot-7128398378/log.50011096._001310.job.log.tgz.1
[2026-05-06 05:03:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/e2/log.50011096._001310.job.log.tgz.1
[2026-05-06 05:03:25]  workdir=None
[2026-05-06 05:03:25] ]
[2026-05-06 05:03:25] 2026-05-06 03:00:54,717 | INFO     | transferring file log.50011096._001310.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/0/PanDA_Pilot-7128398378/log.50011096._001310.job.log.tgz.1 to /var/lib/b
[2026-05-06 05:03:25] 2026-05-06 03:00:54,717 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/0/PanDA_Pilot-7128398378/log.50011096._001310.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/0/lo
[2026-05-06 05:03:25] 2026-05-06 03:00:54,741 | INFO     | adding to output.list: log.50011096._001310.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/e2/log.50011096._001310.job.log.tg
[2026-05-06 05:03:25] 2026-05-06 03:00:54,742 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-06 05:03:25] 2026-05-06 03:00:54,742 | INFO     | summary of transferred files:
[2026-05-06 05:03:25] 2026-05-06 03:00:54,742 | INFO     |  -- lfn=log.50011096._001310.job.log.tgz.1, status_code=0, status=transferred
[2026-05-06 05:03:25] 2026-05-06 03:00:54,742 | INFO     | stage-out finished correctly
[2026-05-06 05:03:25] 2026-05-06 03:00:57,145 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-06 05:03:25] 2026-05-06 03:00:57,988 | INFO     | job 7128398378 has state=finished
[2026-05-06 05:03:25] 2026-05-06 03:00:57,989 | INFO     | preparing for final server update for job 7128398378 in state='finished'
[2026-05-06 05:03:25] 2026-05-06 03:00:57,989 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/0/PanDA_Pilot-7128398378/jobReport.json
[2026-05-06 05:03:25] 2026-05-06 03:00:57,992 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/0/workernode_map.json
[2026-05-06 05:03:25] 2026-05-06 03:00:57,992 | INFO     | this job has now completed (state=finished)
[2026-05-06 05:03:25] 2026-05-06 03:00:57,992 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-06 05:03:25] 2026-05-06 03:00:57,992 | INFO     | log transfer has been attempted: DONE
[2026-05-06 05:03:25] 2026-05-06 03:00:57,992 | INFO     | job 7128398378 has finished - writing final server update
[2026-05-06 05:03:25] 2026-05-06 03:00:57,993 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1884668/.job.ad'
[2026-05-06 05:03:25] 2026-05-06 03:00:57,993 | INFO     | total number of processed events: 400 (read)
[2026-05-06 05:03:25] 2026-05-06 03:00:58,015 | INFO     | using path: /var/lib/boinc/var/slot72/slots/0/PanDA_Pilot-7128398378/memory_monitor_summary.json (trf name=prmon)
[2026-05-06 05:03:25] 2026-05-06 03:00:58,016 | INFO     | extracted standard info from prmon json
[2026-05-06 05:03:25] 2026-05-06 03:00:58,016 | INFO     | extracted standard memory fields from prmon json
[2026-05-06 05:03:25] 2026-05-06 03:00:58,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-06 05:03:25] 2026-05-06 03:00:58,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-06 05:03:25] 2026-05-06 03:00:58,018 | INFO     | fitting pss+swap vs Time
[2026-05-06 05:03:25] 2026-05-06 03:00:58,018 | INFO     | sum of square deviations: 170944600.5
[2026-05-06 05:03:25] 2026-05-06 03:00:58,019 | INFO     | sum of deviations: -7899081204.500002
[2026-05-06 05:03:25] 2026-05-06 03:00:58,019 | INFO     | mean x (centered): 0.0
[2026-05-06 05:03:25] 2026-05-06 03:00:58,019 | INFO     | mean y: 2416360.475609756
[2026-05-06 05:03:25] 2026-05-06 03:00:58,019 | INFO     | intersect: 2416360.475609756
[2026-05-06 05:03:25] 2026-05-06 03:00:58,019 | INFO     | chi2: 0.017527573520407673
[2026-05-06 05:03:25] 2026-05-06 03:00:58,019 | INFO     | current memory leak: -46.21 B/s (using 82 data points, chi2=0.02)
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | could have reported an average CPU frequency of 2788 MHz (7 samples)
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | ..............................
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | . Timing measurements:
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | . get job = 0 s
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | . initial setup = 6 s
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | . payload setup = 11 s
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | . stage-in = 0 s
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | . payload execution = 5402 s
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | . stage-out = 0 s
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | . log creation = 0 s
[2026-05-06 05:03:25] 2026-05-06 03:00:58,020 | INFO     | ..............................
[2026-05-06 05:03:25] 2026-05-06 03:00:58,110 | INFO     | 
[2026-05-06 05:03:25] 2026-05-06 03:00:58,110 | INFO     | job summary report
[2026-05-06 05:03:25] 2026-05-06 03:00:58,110 | INFO     | --------------------------------------------------
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | PanDA job id: 7128398378
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | task id: 50011096
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | errors: (none)
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | pilot state: finished 
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | transexitcode: 0
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | exeerrorcode: 0
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | exeerrordiag: 
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | exitcode: 0
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | exitmsg: OK
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | cpuconsumptiontime: 20938 s
[2026-05-06 05:03:25] 2026-05-06 03:00:58,111 | INFO     | nevents: 400
[2026-05-06 05:03:25] 2026-05-06 03:00:58,112 | INFO     | neventsw: 0
[2026-05-06 05:03:25] 2026-05-06 03:00:58,112 | INFO     | pid: 1324258
[2026-05-06 05:03:25] 2026-05-06 03:00:58,112 | INFO     | pgrp: 1324258
[2026-05-06 05:03:25] 2026-05-06 03:00:58,112 | INFO     | corecount: 4
[2026-05-06 05:03:25] 2026-05-06 03:00:58,112 | INFO     | event service: False
[2026-05-06 05:03:25] 2026-05-06 03:00:58,112 | INFO     | sizes: {0: 2270540, 1: 2272170, 11: 2272198, 5418: 2298855, 5420: 2307875, 5422: 2307931, 5423: 2308253}
[2026-05-06 05:03:25] 2026-05-06 03:00:58,112 | INFO     | --------------------------------------------------
[2026-05-06 05:03:25] 2026-05-06 03:00:58,112 | INFO     | 
[2026-05-06 05:03:25] 2026-05-06 03:00:58,112 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/0
[2026-05-06 05:03:25] 2026-05-06 03:00:58,147 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,148 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,148 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,148 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,149 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-06 05:03:25] 2026-05-06 03:00:58,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,150 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-06 05:03:25] 2026-05-06 03:00:58,150 | INFO     | job 7128398378 has completed (purged errors)
[2026-05-06 05:03:25] 2026-05-06 03:00:58,150 | INFO     | overall cleanup function is called
[2026-05-06 05:03:25] 2026-05-06 03:00:59,159 | INFO     | --- collectZombieJob: --- 10, [1324258]
[2026-05-06 05:03:25] 2026-05-06 03:00:59,159 | INFO     | zombie collector waiting for pid 1324258
[2026-05-06 05:03:25] 2026-05-06 03:00:59,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-06 05:03:25] 2026-05-06 03:00:59,159 | INFO     | collected zombie processes
[2026-05-06 05:03:25] 2026-05-06 03:00:59,159 | INFO     | will attempt to kill all subprocesses of pid=1324258
[2026-05-06 05:03:25] 2026-05-06 03:00:59,940 | INFO     | process IDs to be killed: [1324258] (in reverse order)
[2026-05-06 05:03:25] 2026-05-06 03:01:00,213 | WARNING  | found no corresponding commands to process id(s)
[2026-05-06 05:03:25] 2026-05-06 03:01:00,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-06 05:03:25] 2026-05-06 03:01:00,296 | INFO     | did not find any defunct processes belonging to 1324258
[2026-05-06 05:03:25] 2026-05-06 03:01:00,388 | INFO     | did not find any defunct processes belonging to 1324258
[2026-05-06 05:03:25] 2026-05-06 03:01:00,388 | INFO     | Ready for new job
[2026-05-06 05:03:25] 2026-05-06 03:01:00,390 | INFO     | ***************************************
[2026-05-06 05:03:25] 2026-05-06 03:01:00,391 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-06 05:03:25] 2026-05-06 03:01:00,391 | INFO     | ***************************************
[2026-05-06 05:03:25] 2026-05-06 03:01:00,391 | INFO     | 
[2026-05-06 05:03:25] 2026-05-06 03:01:00,402 | INFO     | architecture information:
[2026-05-06 05:03:25] 2026-05-06 03:01:00,402 | INFO     | executing command: cat /etc/os-release
[2026-05-06 05:03:25] 2026-05-06 03:01:00,431 | INFO     | cat /etc/os-release:
[2026-05-06 05:03:25] NAME="CentOS Linux"
[2026-05-06 05:03:25] VERSION="7 (Core)"
[2026-05-06 05:03:25] ID="centos"
[2026-05-06 05:03:25] ID_LIKE="rhel fedora"
[2026-05-06 05:03:25] VERSION_ID="7"
[2026-05-06 05:03:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-06 05:03:25] ANSI_COLOR="0;31"
[2026-05-06 05:03:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-06 05:03:25] HOME_URL="https://www.centos.org/"
[2026-05-06 05:03:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-06 05:03:25] 
[2026-05-06 05:03:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-06 05:03:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-06 05:03:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-06 05:03:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-06 05:03:25] 
[2026-05-06 05:03:25] 2026-05-06 03:01:00,431 | INFO     | ***************************************
[2026-05-06 05:03:25] 2026-05-06 03:01:00,541 | WARNING  | process 1324258 can no longer be monitored (due to stat problems) - aborting
[2026-05-06 05:03:25] 2026-05-06 03:01:00,934 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/0
[2026-05-06 05:03:25] 2026-05-06 03:01:00,960 | INFO     | sufficient remaining disk space (232464056320 B)
[2026-05-06 05:03:25] 2026-05-06 03:01:00,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-06 05:03:25] 2026-05-06 03:01:00,961 | INFO     | current server update state: UPDATING_FINAL
[2026-05-06 05:03:25] 2026-05-06 03:01:00,961 | INFO     | update_server=False
[2026-05-06 05:03:25] 2026-05-06 03:01:00,961 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-06 05:03:25] 2026-05-06 03:01:00,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-06 05:03:25] 2026-05-06 03:01:01,102 | INFO     | using path: /var/lib/boinc/var/slot72/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-05-06 05:03:25] 2026-05-06 03:01:01,188 | INFO     | all job control threads have been joined
[2026-05-06 05:03:25] 2026-05-06 03:01:01,474 | INFO     | number of running child processes to parent process 1324258: 1
[2026-05-06 05:03:25] 2026-05-06 03:01:01,475 | INFO     | maximum number of monitored processes: 6
[2026-05-06 05:03:25] 2026-05-06 03:01:01,475 | INFO     | aborting job monitoring since job object (job id=7128398378) has expired
[2026-05-06 05:03:25] 2026-05-06 03:01:01,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-06 05:03:25] 2026-05-06 03:01:01,475 | INFO     | will abort loop
[2026-05-06 05:03:25] 2026-05-06 03:01:01,850 | INFO     | all payload control threads have been joined
[2026-05-06 05:03:25] 2026-05-06 03:01:01,950 | INFO     | all data control threads have been joined
[2026-05-06 05:03:25] 2026-05-06 03:01:01,967 | INFO     | [job] retrieve thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,003 | INFO     | [job] validate thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,194 | INFO     | [job] control thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,294 | INFO     | [payload] validate_post thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,315 | INFO     | [job] create_data_payload thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,316 | INFO     | [payload] validate_pre thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,415 | INFO     | [data] copytool_in thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,480 | INFO     | [job] job monitor thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,840 | INFO     | [payload] failed_post thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,856 | INFO     | [payload] control thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,951 | INFO     | [data] control thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:02,967 | INFO     | [data] copytool_out thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:03,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-06 05:03:25] 2026-05-06 03:01:03,214 | INFO     | [payload] execute_payloads thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:03,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-06 05:03:25] 2026-05-06 03:01:04,127 | INFO     | [job] queue monitor thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:07,240 | INFO     | [data] queue_monitor thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:11,780 | INFO     | job.realtimelogging is not enabled
[2026-05-06 05:03:25] 2026-05-06 03:01:12,785 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-06 05:03:25] 2026-05-06 03:01:31,170 | INFO     | [monitor] cgroup control has ended
[2026-05-06 05:03:25] 2026-05-06 03:01:31,995 | INFO     | PID=1318960 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-06 05:03:25] 2026-05-06 03:01:31,995 | INFO     | .. there are 7 such processes running
[2026-05-06 05:03:25] 2026-05-06 03:01:31,995 | INFO     | found 0 job(s) in 20 queues
[2026-05-06 05:03:25] 2026-05-06 03:01:31,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-06 05:03:25] 2026-05-06 03:01:31,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-06 05:03:25] 2026-05-06 03:01:32,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23099561207616)>', '<ExcThread(monitor, started 23099249788672)>']
[2026-05-06 05:03:25] 2026-05-06 03:01:33,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-06 05:03:25] 2026-05-06 03:01:33,001 | INFO     | [monitor] control thread has ended
[2026-05-06 05:03:25] 2026-05-06 03:01:37,201 | INFO     | all workflow threads have been joined
[2026-05-06 05:03:25] 2026-05-06 03:01:37,201 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-06 05:03:25] 2026-05-06 03:01:37,202 | INFO     | traces error code: 0
[2026-05-06 05:03:25] 2026-05-06 03:01:37,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-06 05:03:25] 2026-05-06 03:01:37,370 [wrapper] ==== pilot stdout END ====
[2026-05-06 05:03:25] 2026-05-06 03:01:37,374 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-06 05:03:25] 2026-05-06 03:01:37,378 [wrapper] pilotpid: 1318960
[2026-05-06 05:03:25] 2026-05-06 03:01:37,382 [wrapper] Pilot exit status: 0
[2026-05-06 05:03:25] 2026-05-06 03:01:37,396 [wrapper] pandaids: 7128398378
[2026-05-06 05:03:25] 2026-05-06 03:01:37,569 [wrapper] cleanup supervisor_pilot 1483686 1318961
[2026-05-06 05:03:25] 2026-05-06 03:01:37,573 [wrapper] Test setup, not cleaning
[2026-05-06 05:03:25] 2026-05-06 03:01:37,577 [wrapper] apfmon messages muted
[2026-05-06 05:03:25] 2026-05-06 03:01:37,582 [wrapper] ==== wrapper stdout END ====
[2026-05-06 05:03:25] 2026-05-06 03:01:37,585 [wrapper] ==== wrapper stderr END ====
[2026-05-06 05:03:25]  *** Error codes and diagnostics ***
[2026-05-06 05:03:25]     "exeErrorCode": 0,
[2026-05-06 05:03:25]     "pilotErrorCode": 0,
[2026-05-06 05:03:25]  *** Listing of results directory ***
[2026-05-06 05:03:25] total 404864
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc    683926 May  4 16:55 pilot3.tar.gz
[2026-05-06 05:03:25] -rwx------. 1 boinc boinc     36322 May  4 17:38 runpilot2-wrapper.sh
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc      5631 May  4 17:38 queuedata.json
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc       100 May  6 02:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-06 05:03:25] -rwxr-xr-x. 1 boinc boinc      7986 May  6 02:37 run_atlas
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc       105 May  6 02:37 job.xml
[2026-05-06 05:03:25] -rw-r--r--. 2 boinc boinc 241650026 May  6 03:30 EVNT.50011094._000045.pool.root.1
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc      6540 May  6 03:30 init_data.xml
[2026-05-06 05:03:25] -rw-r--r--. 2 boinc boinc    697397 May  6 03:30 input.tar.gz
[2026-05-06 05:03:25] -rw-r--r--. 2 boinc boinc     15667 May  6 03:30 start_atlas.sh
[2026-05-06 05:03:25] drwxrwx--x. 2 boinc boinc      4096 May  6 03:30 shared
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc         0 May  6 03:30 boinc_lockfile
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc      2523 May  6 03:30 pandaJob.out
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc   1001375 May  6 03:30 agis_schedconf.cvmfs.json
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc   1505918 May  6 03:30 agis_ddmendpoints.agis.ALL.json
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc       439 May  6 03:30 workernode_map.json
[2026-05-06 05:03:25] drwx------. 5 boinc boinc      4096 May  6 03:30 pilot3
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc 167234506 May  6 05:00 HITS.50011096._001310.pool.root.1
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc       486 May  6 05:00 boinc_task_state.xml
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc      1025 May  6 05:00 memory_monitor_summary.json
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc    252420 May  6 05:00 log.50011096._001310.job.log.tgz.1
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc        95 May  6 05:00 pilot_heartbeat.json
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc      6361 May  6 05:00 heartbeat_new.json
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc      6252 May  6 05:00 heartbeat.json
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc      5437 May  6 05:01 pilotlog.txt
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc    528471 May  6 05:01 log.50011096._001310.job.log.1
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc       357 May  6 05:01 output.list
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc       410 May  6 05:01 runtime_log
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc    798720 May  6 05:01 result.tar.gz
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc      8827 May  6 05:01 runtime_log.err
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc       661 May  6 05:01 bd6989ebe97d.diag
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc      8192 May  6 05:03 boinc_mmap_file
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc        27 May  6 05:03 wrapper_checkpoint.txt
[2026-05-06 05:03:25] -rw-r--r--. 1 boinc boinc     21115 May  6 05:03 stderr.txt
[2026-05-06 05:03:25] HITS file was successfully produced:
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc 167234506 May  6 05:00 shared/HITS.pool.root.1
[2026-05-06 05:03:25]  *** Contents of shared directory: ***
[2026-05-06 05:03:25] total 400792
[2026-05-06 05:03:25] -rw-r--r--. 2 boinc boinc 241650026 May  6 03:30 ATLAS.root_0
[2026-05-06 05:03:25] -rw-r--r--. 2 boinc boinc    697397 May  6 03:30 input.tar.gz
[2026-05-06 05:03:25] -rw-r--r--. 2 boinc boinc     15667 May  6 03:30 start_atlas.sh
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc 167234506 May  6 05:00 HITS.pool.root.1
[2026-05-06 05:03:25] -rw-------. 1 boinc boinc    798720 May  6 05:01 result.tar.gz
05:03:27 (1314537): run_atlas exited; CPU time 21184.506211
05:03:27 (1314537): called boinc_finish(0)

</stderr_txt>
]]>

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