Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:58:28 (689571): wrapper (7.7.26015): starting
21:58:28 (689571): wrapper: running run_atlas (--nthreads 4)
[2026-05-05 21:58:28] Arguments: --nthreads 4
[2026-05-05 21:58:28] Threads: 4
[2026-05-05 21:58:28] Checking for CVMFS
[2026-05-05 21:58:28] No cvmfs_config command found, will try listing directly
[2026-05-05 21:58:28] CVMFS is ok
[2026-05-05 21:58:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-05 21:58:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-05 21:58:28] Further information can be found at the LHC@home message board.
[2026-05-05 21:58:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-05 21:58:28] Checking for apptainer binary...
[2026-05-05 21:58:28] which: no apptainer in ((null))
[2026-05-05 21:58:28] apptainer is not installed, using version from CVMFS
[2026-05-05 21:58:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-05 21:58:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-05-05 21:58:29] apptainer works
[2026-05-05 21:58:29] Set ATHENA_PROC_NUMBER=4
[2026-05-05 21:58:29] Set ATHENA_CORE_NUMBER=4
[2026-05-05 21:58:29] Starting ATLAS job with PandaID=7128398375
[2026-05-05 21:58:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 23:44:31]  *** The last 200 lines of the pilot log: ***
[2026-05-05 23:44:32] 2026-05-05 21:40:27,475 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,475 | INFO     | log transfer has been attempted: DONE
[2026-05-05 23:44:32] 2026-05-05 21:40:27,476 | INFO     | job 7128398375 has finished - writing final server update
[2026-05-05 23:44:32] 2026-05-05 21:40:27,476 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1884668/.job.ad'
[2026-05-05 23:44:32] 2026-05-05 21:40:27,476 | INFO     | total number of processed events: 400 (read)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,498 | INFO     | using path: /var/lib/boinc/var/slot72/slots/0/PanDA_Pilot-7128398375/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,499 | INFO     | extracted standard info from prmon json
[2026-05-05 23:44:32] 2026-05-05 21:40:27,499 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 23:44:32] 2026-05-05 21:40:27,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 23:44:32] 2026-05-05 21:40:27,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 23:44:32] 2026-05-05 21:40:27,501 | INFO     | fitting pss+swap vs Time
[2026-05-05 23:44:32] 2026-05-05 21:40:27,501 | INFO     | sum of square deviations: 310052325.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,502 | INFO     | sum of deviations: 149299939.9999981
[2026-05-05 23:44:32] 2026-05-05 21:40:27,502 | INFO     | mean x (centered): 0.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,502 | INFO     | mean y: 2302333.94
[2026-05-05 23:44:32] 2026-05-05 21:40:27,502 | INFO     | intersect: 2302333.94
[2026-05-05 23:44:32] 2026-05-05 21:40:27,502 | INFO     | chi2: 2.6442847095294004
[2026-05-05 23:44:32] 2026-05-05 21:40:27,502 | INFO     | sum of square deviations: 265828240.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,503 | INFO     | sum of deviations: 6472647841.000001
[2026-05-05 23:44:32] 2026-05-05 21:40:27,503 | INFO     | mean x (centered): 0.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,503 | INFO     | mean y: 2323236.6631578947
[2026-05-05 23:44:32] 2026-05-05 21:40:27,503 | INFO     | intersect: 2323236.6631578947
[2026-05-05 23:44:32] 2026-05-05 21:40:27,503 | INFO     | chi2: 1.8053123947723912
[2026-05-05 23:44:32] 2026-05-05 21:40:27,503 | INFO     | current chi2=1.8053123947723912 (change=31.727760317697406 %)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,503 | INFO     | sum of square deviations: 226022842.5
[2026-05-05 23:44:32] 2026-05-05 21:40:27,504 | INFO     | sum of deviations: 6182553984.000001
[2026-05-05 23:44:32] 2026-05-05 21:40:27,504 | INFO     | mean x (centered): 0.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,504 | INFO     | mean y: 2322123.8
[2026-05-05 23:44:32] 2026-05-05 21:40:27,504 | INFO     | intersect: 2322123.8
[2026-05-05 23:44:32] 2026-05-05 21:40:27,504 | INFO     | chi2: 1.8107025110046275
[2026-05-05 23:44:32] 2026-05-05 21:40:27,504 | INFO     | current chi2=1.8107025110046275 (change=-0.29856972387960906 %)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,504 | INFO     | right removable region: 89
[2026-05-05 23:44:32] 2026-05-05 21:40:27,505 | INFO     | sum of square deviations: 265828240.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,505 | INFO     | sum of deviations: -14396222101.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,505 | INFO     | mean x (centered): 0.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,505 | INFO     | mean y: 2351346.7789473683
[2026-05-05 23:44:32] 2026-05-05 21:40:27,505 | INFO     | intersect: 2351346.7789473683
[2026-05-05 23:44:32] 2026-05-05 21:40:27,505 | INFO     | chi2: 1.0453834014952859
[2026-05-05 23:44:32] 2026-05-05 21:40:27,505 | INFO     | current chi2=1.0453834014952859 (change=60.46630690984364 %)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,506 | INFO     | sum of square deviations: 226022842.5
[2026-05-05 23:44:32] 2026-05-05 21:40:27,506 | INFO     | sum of deviations: -9650993183.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,506 | INFO     | mean x (centered): 0.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,506 | INFO     | mean y: 2333060.6222222224
[2026-05-05 23:44:32] 2026-05-05 21:40:27,506 | INFO     | intersect: 2333060.6222222224
[2026-05-05 23:44:32] 2026-05-05 21:40:27,506 | INFO     | chi2: 0.9949161788036274
[2026-05-05 23:44:32] 2026-05-05 21:40:27,506 | INFO     | current chi2=0.9949161788036274 (change=4.827628085492045 %)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,507 | INFO     | left removable region: 10
[2026-05-05 23:44:32] 2026-05-05 21:40:27,507 | INFO     | sum of square deviations: 152858680.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,507 | INFO     | sum of deviations: -3279122527.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,507 | INFO     | mean x (centered): 0.0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,507 | INFO     | mean y: 2359364.265822785
[2026-05-05 23:44:32] 2026-05-05 21:40:27,507 | INFO     | intersect: 2359364.265822785
[2026-05-05 23:44:32] 2026-05-05 21:40:27,507 | INFO     | chi2: 0.0912125263398262
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | current memory leak: -21.45 B/s (using 79 data points, chi2=0.09)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | could have reported an average CPU frequency of 2771 MHz (7 samples)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | ..............................
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | . Timing measurements:
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | . get job = 0 s
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | . initial setup = 6 s
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | . payload setup = 13 s
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | . stage-in = 0 s
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | . payload execution = 6068 s
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | . stage-out = 0 s
[2026-05-05 23:44:32] 2026-05-05 21:40:27,508 | INFO     | . log creation = 0 s
[2026-05-05 23:44:32] 2026-05-05 21:40:27,509 | INFO     | ..............................
[2026-05-05 23:44:32] 2026-05-05 21:40:27,591 | INFO     | 
[2026-05-05 23:44:32] 2026-05-05 21:40:27,592 | INFO     | job summary report
[2026-05-05 23:44:32] 2026-05-05 21:40:27,592 | INFO     | --------------------------------------------------
[2026-05-05 23:44:32] 2026-05-05 21:40:27,592 | INFO     | PanDA job id: 7128398375
[2026-05-05 23:44:32] 2026-05-05 21:40:27,592 | INFO     | task id: 50011096
[2026-05-05 23:44:32] 2026-05-05 21:40:27,592 | INFO     | errors: (none)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,592 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 23:44:32] 2026-05-05 21:40:27,592 | INFO     | pilot state: finished 
[2026-05-05 23:44:32] 2026-05-05 21:40:27,592 | INFO     | transexitcode: 0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,592 | INFO     | exeerrorcode: 0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,592 | INFO     | exeerrordiag: 
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | exitcode: 0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | exitmsg: OK
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | cpuconsumptiontime: 22887 s
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | nevents: 400
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | neventsw: 0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | pid: 699824
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | pgrp: 699824
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | corecount: 4
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | event service: False
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | sizes: {0: 2270540, 1: 2272170, 11: 2272198, 6086: 2299026, 6088: 2308102, 6089: 2308240}
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | --------------------------------------------------
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | 
[2026-05-05 23:44:32] 2026-05-05 21:40:27,593 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/0
[2026-05-05 23:44:32] 2026-05-05 21:40:27,626 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,627 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,627 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,627 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,628 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,628 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 23:44:32] 2026-05-05 21:40:27,629 | INFO     | job 7128398375 has completed (purged errors)
[2026-05-05 23:44:32] 2026-05-05 21:40:27,629 | INFO     | overall cleanup function is called
[2026-05-05 23:44:32] 2026-05-05 21:40:28,637 | INFO     | --- collectZombieJob: --- 10, [699824]
[2026-05-05 23:44:32] 2026-05-05 21:40:28,637 | INFO     | zombie collector waiting for pid 699824
[2026-05-05 23:44:32] 2026-05-05 21:40:28,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 23:44:32] 2026-05-05 21:40:28,637 | INFO     | collected zombie processes
[2026-05-05 23:44:32] 2026-05-05 21:40:28,638 | INFO     | will attempt to kill all subprocesses of pid=699824
[2026-05-05 23:44:32] 2026-05-05 21:40:29,216 | INFO     | process IDs to be killed: [699824] (in reverse order)
[2026-05-05 23:44:32] 2026-05-05 21:40:29,495 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 23:44:32] 2026-05-05 21:40:29,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 23:44:32] 2026-05-05 21:40:29,526 | INFO     | did not find any defunct processes belonging to 699824
[2026-05-05 23:44:32] 2026-05-05 21:40:29,550 | INFO     | did not find any defunct processes belonging to 699824
[2026-05-05 23:44:32] 2026-05-05 21:40:29,551 | INFO     | Ready for new job
[2026-05-05 23:44:32] 2026-05-05 21:40:29,553 | INFO     | ***************************************
[2026-05-05 23:44:32] 2026-05-05 21:40:29,553 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 23:44:32] 2026-05-05 21:40:29,553 | INFO     | ***************************************
[2026-05-05 23:44:32] 2026-05-05 21:40:29,553 | INFO     | 
[2026-05-05 23:44:32] 2026-05-05 21:40:29,561 | INFO     | architecture information:
[2026-05-05 23:44:32] 2026-05-05 21:40:29,562 | INFO     | executing command: cat /etc/os-release
[2026-05-05 23:44:32] 2026-05-05 21:40:29,585 | INFO     | cat /etc/os-release:
[2026-05-05 23:44:32] NAME="CentOS Linux"
[2026-05-05 23:44:32] VERSION="7 (Core)"
[2026-05-05 23:44:32] ID="centos"
[2026-05-05 23:44:32] ID_LIKE="rhel fedora"
[2026-05-05 23:44:32] VERSION_ID="7"
[2026-05-05 23:44:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 23:44:32] ANSI_COLOR="0;31"
[2026-05-05 23:44:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 23:44:32] HOME_URL="https://www.centos.org/"
[2026-05-05 23:44:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 23:44:32] 
[2026-05-05 23:44:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 23:44:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 23:44:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 23:44:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 23:44:32] 
[2026-05-05 23:44:32] 2026-05-05 21:40:29,586 | INFO     | ***************************************
[2026-05-05 23:44:32] 2026-05-05 21:40:30,088 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/0
[2026-05-05 23:44:32] 2026-05-05 21:40:30,114 | INFO     | sufficient remaining disk space (238266875904 B)
[2026-05-05 23:44:32] 2026-05-05 21:40:30,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 23:44:32] 2026-05-05 21:40:30,114 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 23:44:32] 2026-05-05 21:40:30,114 | INFO     | update_server=False
[2026-05-05 23:44:32] 2026-05-05 21:40:30,114 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 23:44:32] 2026-05-05 21:40:30,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 23:44:32] 2026-05-05 21:40:30,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 23:44:32] 2026-05-05 21:40:30,331 | INFO     | aborting loop
[2026-05-05 23:44:32] 2026-05-05 21:40:30,550 | INFO     | all data control threads have been joined
[2026-05-05 23:44:32] 2026-05-05 21:40:30,760 | INFO     | all job control threads have been joined
[2026-05-05 23:44:32] 2026-05-05 21:40:31,120 | INFO     | [job] retrieve thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:31,306 | INFO     | [job] validate thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:31,337 | INFO     | [job] job monitor thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:31,371 | INFO     | all payload control threads have been joined
[2026-05-05 23:44:32] 2026-05-05 21:40:31,556 | INFO     | [data] control thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:31,638 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:31,765 | INFO     | [job] control thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:31,815 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:31,887 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:31,938 | INFO     | [payload] failed_post thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:32,121 | INFO     | [data] copytool_out thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:32,139 | INFO     | [data] copytool_in thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:32,377 | INFO     | [payload] control thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:32,597 | INFO     | [payload] validate_post thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:32,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 23:44:32] 2026-05-05 21:40:33,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 23:44:32] 2026-05-05 21:40:33,608 | INFO     | [job] queue monitor thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:37,484 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:41,136 | INFO     | job.realtimelogging is not enabled
[2026-05-05 23:44:32] 2026-05-05 21:40:42,138 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 23:44:32] 2026-05-05 21:40:55,688 | INFO     | [monitor] cgroup control has ended
[2026-05-05 23:44:32] 2026-05-05 21:40:56,537 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22444136646464)>', '<ExcThread(monitor, started 22443896084224)>']
[2026-05-05 23:44:32] 2026-05-05 21:40:59,730 | INFO     | PID=694040 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-05 23:44:32] 2026-05-05 21:40:59,730 | INFO     | .. there are 7 such processes running
[2026-05-05 23:44:32] 2026-05-05 21:40:59,732 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 23:44:32] 2026-05-05 21:40:59,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 23:44:32] 2026-05-05 21:40:59,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 23:44:32] 2026-05-05 21:40:59,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 23:44:32] 2026-05-05 21:40:59,732 | INFO     | [monitor] control thread has ended
[2026-05-05 23:44:32] 2026-05-05 21:41:01,560 | INFO     | all workflow threads have been joined
[2026-05-05 23:44:32] 2026-05-05 21:41:01,560 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 23:44:32] 2026-05-05 21:41:01,560 | INFO     | traces error code: 0
[2026-05-05 23:44:32] 2026-05-05 21:41:01,560 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 23:44:32] 2026-05-05 21:41:01,735 [wrapper] ==== pilot stdout END ====
[2026-05-05 23:44:32] 2026-05-05 21:41:01,739 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 23:44:32] 2026-05-05 21:41:01,743 [wrapper] pilotpid: 694040
[2026-05-05 23:44:32] 2026-05-05 21:41:01,746 [wrapper] Pilot exit status: 0
[2026-05-05 23:44:32] 2026-05-05 21:41:01,760 [wrapper] pandaids: 7128398375
[2026-05-05 23:44:32] 2026-05-05 21:41:01,937 [wrapper] cleanup supervisor_pilot  869826 694041
[2026-05-05 23:44:32] 2026-05-05 21:41:01,941 [wrapper] Test setup, not cleaning
[2026-05-05 23:44:32] 2026-05-05 21:41:01,945 [wrapper] apfmon messages muted
[2026-05-05 23:44:32] 2026-05-05 21:41:01,948 [wrapper] ==== wrapper stdout END ====
[2026-05-05 23:44:32] 2026-05-05 21:41:01,952 [wrapper] ==== wrapper stderr END ====
[2026-05-05 23:44:32]  *** Error codes and diagnostics ***
[2026-05-05 23:44:32]     "exeErrorCode": 0,
[2026-05-05 23:44:32]     "pilotErrorCode": 0,
[2026-05-05 23:44:32]  *** Listing of results directory ***
[2026-05-05 23:44:32] total 406624
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc    683926 May  4 16:55 pilot3.tar.gz
[2026-05-05 23:44:32] -rwx------. 1 boinc boinc     36322 May  4 17:38 runpilot2-wrapper.sh
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc      5631 May  4 17:38 queuedata.json
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc       100 May  5 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 23:44:32] -rwxr-xr-x. 1 boinc boinc      7986 May  5 21:00 run_atlas
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc       105 May  5 21:00 job.xml
[2026-05-05 23:44:32] -rw-r--r--. 2 boinc boinc 241650026 May  5 21:58 EVNT.50011094._000045.pool.root.1
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc      6540 May  5 21:58 init_data.xml
[2026-05-05 23:44:32] -rw-r--r--. 2 boinc boinc    697396 May  5 21:58 input.tar.gz
[2026-05-05 23:44:32] -rw-r--r--. 2 boinc boinc     15667 May  5 21:58 start_atlas.sh
[2026-05-05 23:44:32] drwxrwx--x. 2 boinc boinc      4096 May  5 21:58 shared
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc         0 May  5 21:58 boinc_lockfile
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc      2523 May  5 21:58 pandaJob.out
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc   1001374 May  5 21:58 agis_schedconf.cvmfs.json
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc   1505918 May  5 21:58 agis_ddmendpoints.agis.ALL.json
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc       439 May  5 21:58 workernode_map.json
[2026-05-05 23:44:32] drwx------. 5 boinc boinc      4096 May  5 21:58 pilot3
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc 168918493 May  5 23:39 HITS.50011096._001307.pool.root.1
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc       486 May  5 23:39 boinc_task_state.xml
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc      1026 May  5 23:40 memory_monitor_summary.json
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc    256463 May  5 23:40 log.50011096._001307.job.log.tgz.1
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc      6362 May  5 23:40 heartbeat_new.json
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc      6253 May  5 23:40 heartbeat.json
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc        95 May  5 23:40 pilot_heartbeat.json
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc      4904 May  5 23:41 pilotlog.txt
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc    584253 May  5 23:41 log.50011096._001307.job.log.1
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc       357 May  5 23:41 output.list
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc       410 May  5 23:41 runtime_log
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc    860160 May  5 23:41 result.tar.gz
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc      8827 May  5 23:41 runtime_log.err
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc       662 May  5 23:41 bd696dbaab27.diag
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc        26 May  5 23:44 wrapper_checkpoint.txt
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc      8192 May  5 23:44 boinc_mmap_file
[2026-05-05 23:44:32] -rw-r--r--. 1 boinc boinc     20751 May  5 23:44 stderr.txt
[2026-05-05 23:44:32] HITS file was successfully produced:
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc 168918493 May  5 23:39 shared/HITS.pool.root.1
[2026-05-05 23:44:32]  *** Contents of shared directory: ***
[2026-05-05 23:44:32] total 402496
[2026-05-05 23:44:32] -rw-r--r--. 2 boinc boinc 241650026 May  5 21:58 ATLAS.root_0
[2026-05-05 23:44:32] -rw-r--r--. 2 boinc boinc    697396 May  5 21:58 input.tar.gz
[2026-05-05 23:44:32] -rw-r--r--. 2 boinc boinc     15667 May  5 21:58 start_atlas.sh
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc 168918493 May  5 23:39 HITS.pool.root.1
[2026-05-05 23:44:32] -rw-------. 1 boinc boinc    860160 May  5 23:41 result.tar.gz
23:44:33 (689571): run_atlas exited; CPU time 23230.510582
23:44:33 (689571): called boinc_finish(0)

</stderr_txt>
]]>

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