Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:56:33 (455251): wrapper (7.7.26015): starting
21:56:33 (455251): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 21:56:33] Arguments: --nthreads 4
[2026-05-04 21:56:33] Threads: 4
[2026-05-04 21:56:33] Checking for CVMFS
[2026-05-04 21:56:33] No cvmfs_config command found, will try listing directly
[2026-05-04 21:56:33] CVMFS is ok
[2026-05-04 21:56:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 21:56:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 21:56:33] Further information can be found at the LHC@home message board.
[2026-05-04 21:56:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 21:56:33] Checking for apptainer binary...
[2026-05-04 21:56:33] which: no apptainer in ((null))
[2026-05-04 21:56:33] apptainer is not installed, using version from CVMFS
[2026-05-04 21:56:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 21:56:33] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-05-04 21:56:33] apptainer works
[2026-05-04 21:56:33] Set ATHENA_PROC_NUMBER=4
[2026-05-04 21:56:33] Set ATHENA_CORE_NUMBER=4
[2026-05-04 21:56:33] Starting ATLAS job with PandaID=7128670725
[2026-05-04 21:56:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 00:34:11]  *** The last 200 lines of the pilot log: ***
[2026-05-05 00:34:11] 2026-05-04 22:33:19,584 | INFO     | total number of processed events: 400 (read)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,595 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/PanDA_Pilot-7128670725/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,596 | INFO     | extracted standard info from prmon json
[2026-05-05 00:34:11] 2026-05-04 22:33:19,596 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 00:34:11] 2026-05-04 22:33:19,596 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 00:34:11] 2026-05-04 22:33:19,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 00:34:11] 2026-05-04 22:33:19,599 | INFO     | fitting pss+swap vs Time
[2026-05-05 00:34:11] 2026-05-04 22:33:19,600 | INFO     | sum of square deviations: 1132458442.5
[2026-05-05 00:34:11] 2026-05-04 22:33:19,600 | INFO     | sum of deviations: 2453004834.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,600 | INFO     | mean x (centered): 0.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,601 | INFO     | mean y: 2318468.324675325
[2026-05-05 00:34:11] 2026-05-04 22:33:19,601 | INFO     | intersect: 2318468.324675325
[2026-05-05 00:34:11] 2026-05-04 22:33:19,601 | INFO     | chi2: 2.1216285927931757
[2026-05-05 00:34:11] 2026-05-04 22:33:19,601 | INFO     | sum of square deviations: 1025693650.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,602 | INFO     | sum of deviations: 11856301356.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,602 | INFO     | mean x (centered): 0.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,602 | INFO     | mean y: 2331533.697986577
[2026-05-05 00:34:11] 2026-05-04 22:33:19,602 | INFO     | intersect: 2331533.697986577
[2026-05-05 00:34:11] 2026-05-04 22:33:19,603 | INFO     | chi2: 1.316881416826288
[2026-05-05 00:34:11] 2026-05-04 22:33:19,603 | INFO     | current chi2=1.316881416826288 (change=37.93063398091834 %)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,603 | INFO     | sum of square deviations: 925859220.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,604 | INFO     | sum of deviations: 11352817482.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,604 | INFO     | mean x (centered): 0.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,604 | INFO     | mean y: 2330764.486111111
[2026-05-05 00:34:11] 2026-05-04 22:33:19,604 | INFO     | intersect: 2330764.486111111
[2026-05-05 00:34:11] 2026-05-04 22:33:19,604 | INFO     | chi2: 1.318276526295257
[2026-05-05 00:34:11] 2026-05-04 22:33:19,604 | INFO     | current chi2=1.318276526295257 (change=-0.10594040216098419 %)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,605 | INFO     | right removable region: 143
[2026-05-05 00:34:11] 2026-05-04 22:33:19,605 | INFO     | sum of square deviations: 1025693650.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,606 | INFO     | sum of deviations: -15080993156.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,606 | INFO     | mean x (centered): 0.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,606 | INFO     | mean y: 2343029.912751678
[2026-05-05 00:34:11] 2026-05-04 22:33:19,606 | INFO     | intersect: 2343029.912751678
[2026-05-05 00:34:11] 2026-05-04 22:33:19,606 | INFO     | chi2: 0.8759946471017694
[2026-05-05 00:34:11] 2026-05-04 22:33:19,606 | INFO     | current chi2=0.8759946471017694 (change=58.71121599334683 %)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,607 | INFO     | sum of square deviations: 925859220.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,607 | INFO     | sum of deviations: -12800717355.5
[2026-05-05 00:34:11] 2026-05-04 22:33:19,607 | INFO     | mean x (centered): 0.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,607 | INFO     | mean y: 2339514.0208333335
[2026-05-05 00:34:11] 2026-05-04 22:33:19,608 | INFO     | intersect: 2339514.0208333335
[2026-05-05 00:34:11] 2026-05-04 22:33:19,608 | INFO     | chi2: 0.8700328927897744
[2026-05-05 00:34:11] 2026-05-04 22:33:19,608 | INFO     | current chi2=0.8700328927897744 (change=0.6805697194291725 %)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,608 | INFO     | left removable region: 10
[2026-05-05 00:34:11] 2026-05-04 22:33:19,608 | INFO     | sum of square deviations: 729472282.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,609 | INFO     | sum of deviations: -3513170072.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,609 | INFO     | mean x (centered): 0.0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,609 | INFO     | mean y: 2354304.736842105
[2026-05-05 00:34:11] 2026-05-04 22:33:19,609 | INFO     | intersect: 2354304.736842105
[2026-05-05 00:34:11] 2026-05-04 22:33:19,609 | INFO     | chi2: 0.03686999242858824
[2026-05-05 00:34:11] 2026-05-04 22:33:19,610 | INFO     | current memory leak: -4.82 B/s (using 133 data points, chi2=0.04)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,610 | INFO     | could have reported an average CPU frequency of 2582 MHz (9 samples)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,610 | INFO     | ..............................
[2026-05-05 00:34:11] 2026-05-04 22:33:19,610 | INFO     | . Timing measurements:
[2026-05-05 00:34:11] 2026-05-04 22:33:19,610 | INFO     | . get job = 0 s
[2026-05-05 00:34:11] 2026-05-04 22:33:19,610 | INFO     | . initial setup = 5 s
[2026-05-05 00:34:11] 2026-05-04 22:33:19,610 | INFO     | . payload setup = 9 s
[2026-05-05 00:34:11] 2026-05-04 22:33:19,611 | INFO     | . stage-in = 0 s
[2026-05-05 00:34:11] 2026-05-04 22:33:19,611 | INFO     | . payload execution = 9360 s
[2026-05-05 00:34:11] 2026-05-04 22:33:19,611 | INFO     | . stage-out = 0 s
[2026-05-05 00:34:11] 2026-05-04 22:33:19,611 | INFO     | . log creation = 0 s
[2026-05-05 00:34:11] 2026-05-04 22:33:19,611 | INFO     | ..............................
[2026-05-05 00:34:11] 2026-05-04 22:33:19,699 | INFO     | 
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | job summary report
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | --------------------------------------------------
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | PanDA job id: 7128670725
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | task id: 50010700
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | errors: (none)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | pilot state: finished 
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | transexitcode: 0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | exeerrorcode: 0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | exeerrordiag: 
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | exitcode: 0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | exitmsg: OK
[2026-05-05 00:34:11] 2026-05-04 22:33:19,700 | INFO     | cpuconsumptiontime: 36004 s
[2026-05-05 00:34:11] 2026-05-04 22:33:19,701 | INFO     | nevents: 400
[2026-05-05 00:34:11] 2026-05-04 22:33:19,701 | INFO     | neventsw: 0
[2026-05-05 00:34:11] 2026-05-04 22:33:19,701 | INFO     | pid: 464903
[2026-05-05 00:34:11] 2026-05-04 22:33:19,701 | INFO     | pgrp: 464903
[2026-05-05 00:34:11] 2026-05-04 22:33:19,701 | INFO     | corecount: 4
[2026-05-05 00:34:11] 2026-05-04 22:33:19,701 | INFO     | event service: False
[2026-05-05 00:34:11] 2026-05-04 22:33:19,701 | INFO     | sizes: {0: 2272158, 11: 2272158, 9374: 2300471, 9375: 2309491, 9377: 2309547, 9378: 2309805}
[2026-05-05 00:34:11] 2026-05-04 22:33:19,701 | INFO     | --------------------------------------------------
[2026-05-05 00:34:11] 2026-05-04 22:33:19,701 | INFO     | 
[2026-05-05 00:34:11] 2026-05-04 22:33:19,701 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/3
[2026-05-05 00:34:11] 2026-05-04 22:33:19,723 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,724 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,724 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,724 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,726 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 00:34:11] 2026-05-04 22:33:19,726 | INFO     | job 7128670725 has completed (purged errors)
[2026-05-05 00:34:11] 2026-05-04 22:33:19,726 | INFO     | overall cleanup function is called
[2026-05-05 00:34:11] 2026-05-04 22:33:20,733 | INFO     | --- collectZombieJob: --- 10, [464903]
[2026-05-05 00:34:11] 2026-05-04 22:33:20,733 | INFO     | zombie collector waiting for pid 464903
[2026-05-05 00:34:11] 2026-05-04 22:33:20,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 00:34:11] 2026-05-04 22:33:20,734 | INFO     | collected zombie processes
[2026-05-05 00:34:11] 2026-05-04 22:33:20,734 | INFO     | will attempt to kill all subprocesses of pid=464903
[2026-05-05 00:34:11] 2026-05-04 22:33:21,022 | INFO     | process IDs to be killed: [464903] (in reverse order)
[2026-05-05 00:34:11] 2026-05-04 22:33:21,139 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 00:34:11] 2026-05-04 22:33:21,140 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 00:34:11] 2026-05-04 22:33:21,152 | INFO     | did not find any defunct processes belonging to 464903
[2026-05-05 00:34:11] 2026-05-04 22:33:21,163 | INFO     | did not find any defunct processes belonging to 464903
[2026-05-05 00:34:11] 2026-05-04 22:33:21,164 | INFO     | Ready for new job
[2026-05-05 00:34:11] 2026-05-04 22:33:21,166 | INFO     | ***************************************
[2026-05-05 00:34:11] 2026-05-04 22:33:21,166 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 00:34:11] 2026-05-04 22:33:21,166 | INFO     | ***************************************
[2026-05-05 00:34:11] 2026-05-04 22:33:21,166 | INFO     | 
[2026-05-05 00:34:11] 2026-05-04 22:33:21,170 | INFO     | architecture information:
[2026-05-05 00:34:11] 2026-05-04 22:33:21,171 | INFO     | executing command: cat /etc/os-release
[2026-05-05 00:34:11] 2026-05-04 22:33:21,185 | INFO     | cat /etc/os-release:
[2026-05-05 00:34:11] NAME="CentOS Linux"
[2026-05-05 00:34:11] VERSION="7 (Core)"
[2026-05-05 00:34:11] ID="centos"
[2026-05-05 00:34:11] ID_LIKE="rhel fedora"
[2026-05-05 00:34:11] VERSION_ID="7"
[2026-05-05 00:34:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 00:34:11] ANSI_COLOR="0;31"
[2026-05-05 00:34:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 00:34:11] HOME_URL="https://www.centos.org/"
[2026-05-05 00:34:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 00:34:11] 
[2026-05-05 00:34:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 00:34:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 00:34:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 00:34:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 00:34:11] 
[2026-05-05 00:34:11] 2026-05-04 22:33:21,186 | INFO     | ***************************************
[2026-05-05 00:34:11] 2026-05-04 22:33:21,688 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/3
[2026-05-05 00:34:11] 2026-05-04 22:33:21,705 | INFO     | sufficient remaining disk space (57431556096 B)
[2026-05-05 00:34:11] 2026-05-04 22:33:21,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 00:34:11] 2026-05-04 22:33:21,706 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 00:34:11] 2026-05-04 22:33:21,706 | INFO     | update_server=False
[2026-05-05 00:34:11] 2026-05-04 22:33:21,706 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 00:34:11] 2026-05-04 22:33:21,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 00:34:11] 2026-05-04 22:33:21,872 | INFO     | all job control threads have been joined
[2026-05-05 00:34:11] 2026-05-04 22:33:21,883 | INFO     | all payload control threads have been joined
[2026-05-05 00:34:11] 2026-05-04 22:33:21,925 | WARNING  | process 464903 can no longer be monitored (due to stat problems) - aborting
[2026-05-05 00:34:11] 2026-05-04 22:33:22,204 | INFO     | using path: /var/lib/boinc/var/slot28/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 00:34:11] 2026-05-04 22:33:22,488 | INFO     | number of running child processes to parent process 464903: 1
[2026-05-05 00:34:11] 2026-05-04 22:33:22,488 | INFO     | maximum number of monitored processes: 6
[2026-05-05 00:34:11] 2026-05-04 22:33:22,488 | INFO     | aborting job monitoring since job object (job id=7128670725) has expired
[2026-05-05 00:34:11] 2026-05-04 22:33:22,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 00:34:11] 2026-05-04 22:33:22,489 | INFO     | will abort loop
[2026-05-05 00:34:11] 2026-05-04 22:33:22,520 | INFO     | all data control threads have been joined
[2026-05-05 00:34:11] 2026-05-04 22:33:22,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 00:34:11] 2026-05-04 22:33:22,711 | INFO     | [job] retrieve thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:22,875 | INFO     | [job] control thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:22,889 | INFO     | [payload] control thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:22,941 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:23,086 | INFO     | [job] validate thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:23,180 | INFO     | [payload] validate_post thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:23,265 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:23,494 | INFO     | [job] job monitor thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:23,525 | INFO     | [data] control thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:23,550 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:23,574 | INFO     | [payload] failed_post thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:23,676 | INFO     | [data] copytool_in thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:24,193 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:24,687 | INFO     | [data] copytool_out thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:24,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 00:34:11] 2026-05-04 22:33:25,713 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:25,713 | INFO     | [job] queue monitor thread has finished
[2026-05-05 00:34:11] 2026-05-04 22:33:53,103 | INFO     | PID=459705 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-05 00:34:11] 2026-05-04 22:33:53,103 | INFO     | .. there are 9 such processes running
[2026-05-05 00:34:11] 2026-05-04 22:33:53,103 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 00:34:11] 2026-05-04 22:33:53,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 00:34:11] 2026-05-04 22:33:53,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 00:34:11] 2026-05-04 22:34:05,147 | INFO     | [monitor] cgroup control has ended
[2026-05-05 00:34:11] 2026-05-04 22:34:06,153 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22764446439232)>', '<ExcThread(monitor, started 22764212995840)>']
[2026-05-05 00:34:11] 2026-05-04 22:34:06,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 00:34:11] 2026-05-04 22:34:06,166 | INFO     | [monitor] control thread has ended
[2026-05-05 00:34:11] 2026-05-04 22:34:11,171 | INFO     | all workflow threads have been joined
[2026-05-05 00:34:11] 2026-05-04 22:34:11,172 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 00:34:11] 2026-05-04 22:34:11,172 | INFO     | traces error code: 0
[2026-05-05 00:34:11] 2026-05-04 22:34:11,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 00:34:11] 2026-05-04 22:34:11,339 [wrapper] ==== pilot stdout END ====
[2026-05-05 00:34:11] 2026-05-04 22:34:11,341 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 00:34:11] 2026-05-04 22:34:11,344 [wrapper] pilotpid: 459705
[2026-05-05 00:34:11] 2026-05-04 22:34:11,346 [wrapper] Pilot exit status: 0
[2026-05-05 00:34:11] 2026-05-04 22:34:11,355 [wrapper] pandaids: 7128670725
[2026-05-05 00:34:11] 2026-05-04 22:34:11,429 [wrapper] cleanup supervisor_pilot  677100 459706
[2026-05-05 00:34:11] 2026-05-04 22:34:11,432 [wrapper] Test setup, not cleaning
[2026-05-05 00:34:11] 2026-05-04 22:34:11,434 [wrapper] apfmon messages muted
[2026-05-05 00:34:11] 2026-05-04 22:34:11,437 [wrapper] ==== wrapper stdout END ====
[2026-05-05 00:34:11] 2026-05-04 22:34:11,439 [wrapper] ==== wrapper stderr END ====
[2026-05-05 00:34:11]  *** Error codes and diagnostics ***
[2026-05-05 00:34:11]     "exeErrorCode": 0,
[2026-05-05 00:34:11]     "pilotErrorCode": 0,
[2026-05-05 00:34:11]  *** Listing of results directory ***
[2026-05-05 00:34:11] total 413748
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc    683926 May  4 10:59 pilot3.tar.gz
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc      5631 May  4 11:28 queuedata.json
[2026-05-05 00:34:11] -rwx------. 1 boinc boinc     36322 May  4 11:29 runpilot2-wrapper.sh
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc       100 May  4 21:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 00:34:11] -rwxr-xr-x. 1 boinc boinc      7986 May  4 21:56 run_atlas
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc       105 May  4 21:56 job.xml
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc      6483 May  4 21:56 init_data.xml
[2026-05-05 00:34:11] -rw-r--r--. 2 boinc boinc 244946319 May  4 21:56 EVNT.50010698._000021.pool.root.1
[2026-05-05 00:34:11] -rw-r--r--. 2 boinc boinc     15667 May  4 21:56 start_atlas.sh
[2026-05-05 00:34:11] drwxrwx--x. 2 boinc boinc      4096 May  4 21:56 shared
[2026-05-05 00:34:11] -rw-r--r--. 2 boinc boinc    697401 May  4 21:56 input.tar.gz
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc         0 May  4 21:56 boinc_lockfile
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc      2513 May  4 21:56 pandaJob.out
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc   1002597 May  4 21:56 agis_schedconf.cvmfs.json
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc   1505918 May  4 21:56 agis_ddmendpoints.agis.ALL.json
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc       452 May  4 21:56 workernode_map.json
[2026-05-05 00:34:11] drwx------. 5 boinc boinc      4096 May  4 21:56 pilot3
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc 172231231 May  5 00:32 HITS.50010700._000679.pool.root.1
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc       487 May  5 00:32 boinc_task_state.xml
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc      1032 May  5 00:33 memory_monitor_summary.json
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc        95 May  5 00:33 pilot_heartbeat.json
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc    282027 May  5 00:33 log.50010700._000679.job.log.tgz.1
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc      6412 May  5 00:33 heartbeat_new.json
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc      6303 May  5 00:33 heartbeat.json
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc      8192 May  5 00:33 boinc_mmap_file
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc        27 May  5 00:33 wrapper_checkpoint.txt
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc      5360 May  5 00:34 pilotlog.txt
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc    901385 May  5 00:34 log.50010700._000679.job.log.1
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc       357 May  5 00:34 output.list
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc       410 May  5 00:34 runtime_log
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc   1198080 May  5 00:34 result.tar.gz
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc      8827 May  5 00:34 runtime_log.err
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc       662 May  5 00:34 6714d46102f8.diag
[2026-05-05 00:34:11] -rw-r--r--. 1 boinc boinc     20784 May  5 00:34 stderr.txt
[2026-05-05 00:34:11] HITS file was successfully produced:
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc 172231231 May  5 00:32 shared/HITS.pool.root.1
[2026-05-05 00:34:11]  *** Contents of shared directory: ***
[2026-05-05 00:34:11] total 409284
[2026-05-05 00:34:11] -rw-r--r--. 2 boinc boinc 244946319 May  4 21:56 ATLAS.root_0
[2026-05-05 00:34:11] -rw-r--r--. 2 boinc boinc     15667 May  4 21:56 start_atlas.sh
[2026-05-05 00:34:11] -rw-r--r--. 2 boinc boinc    697401 May  4 21:56 input.tar.gz
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc 172231231 May  5 00:32 HITS.pool.root.1
[2026-05-05 00:34:11] -rw-------. 1 boinc boinc   1198080 May  5 00:34 result.tar.gz
00:34:13 (455251): run_atlas exited; CPU time 36287.520961
00:34:13 (455251): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN