Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:11:06 (45655): wrapper (7.7.26015): starting
07:11:06 (45655): wrapper: running run_atlas (--nthreads 12)
[2026-05-04 07:11:06] Arguments: --nthreads 12
[2026-05-04 07:11:06] Threads: 12
[2026-05-04 07:11:06] Checking for CVMFS
[2026-05-04 07:11:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 07:11:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 07:11:06] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 07:11:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 07:11:06] 2.13.3.0 8168 5525 121724 159202 0 302 23244357 39288832 8305 16776704 0 3077325 99.150 5814384 32699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-04 07:11:06] CVMFS is ok
[2026-05-04 07:11:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 07:11:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 07:11:06] Further information can be found at the LHC@home message board.
[2026-05-04 07:11:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 07:11:06] Checking for apptainer binary...
[2026-05-04 07:11:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 07:11:06] Running /usr/bin/apptainer --version
[2026-05-04 07:11:06] apptainer version 1.4.5-3.el9
[2026-05-04 07:11:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 07:11:06] c-210-14.aglt2.org
[2026-05-04 07:11:06] apptainer works
[2026-05-04 07:11:06] Set ATHENA_PROC_NUMBER=12
[2026-05-04 07:11:06] Set ATHENA_CORE_NUMBER=12
[2026-05-04 07:11:06] Starting ATLAS job with PandaID=7128689155
[2026-05-04 07:11:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 11:49:02]  *** The last 200 lines of the pilot log: ***
[2026-05-04 11:49:02] 2026-05-04 15:47:48,436 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 11:49:02] 2026-05-04 15:47:48,437 | INFO     | log transfer has been attempted: DONE
[2026-05-04 11:49:02] 2026-05-04 15:47:48,437 | INFO     | job 7128689155 has finished - writing final server update
[2026-05-04 11:49:02] 2026-05-04 15:47:48,437 | INFO     | total number of processed events: 400 (read)
[2026-05-04 11:49:02] 2026-05-04 15:47:48,486 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7128689155/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 11:49:02] 2026-05-04 15:47:48,487 | INFO     | extracted standard info from prmon json
[2026-05-04 11:49:02] 2026-05-04 15:47:48,487 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 11:49:02] 2026-05-04 15:47:48,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 11:49:02] 2026-05-04 15:47:48,548 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 11:49:02] 2026-05-04 15:47:48,604 | INFO     | fitting pss+swap vs Time
[2026-05-04 11:49:02] 2026-05-04 15:47:48,605 | INFO     | sum of square deviations: 6240921716.555128
[2026-05-04 11:49:02] 2026-05-04 15:47:48,607 | INFO     | sum of deviations: 1461860688.610279
[2026-05-04 11:49:02] 2026-05-04 15:47:48,637 | INFO     | mean x (centered): 0.0
[2026-05-04 11:49:02] 2026-05-04 15:47:48,637 | INFO     | mean y: 2689037.830882353
[2026-05-04 11:49:02] 2026-05-04 15:47:48,638 | INFO     | intersect: 2689037.830882353
[2026-05-04 11:49:02] 2026-05-04 15:47:48,638 | INFO     | chi2: 2.7441406363127148
[2026-05-04 11:49:02] 2026-05-04 15:47:48,639 | INFO     | sum of square deviations: 5903139026.726552
[2026-05-04 11:49:02] 2026-05-04 15:47:48,641 | INFO     | sum of deviations: 38642459905.617966
[2026-05-04 11:49:02] 2026-05-04 15:47:48,641 | INFO     | mean x (centered): 0.0
[2026-05-04 11:49:02] 2026-05-04 15:47:48,641 | INFO     | mean y: 2705634.7528089886
[2026-05-04 11:49:02] 2026-05-04 15:47:48,674 | INFO     | intersect: 2705634.7528089886
[2026-05-04 11:49:02] 2026-05-04 15:47:48,675 | INFO     | chi2: 1.301824099207504
[2026-05-04 11:49:02] 2026-05-04 15:47:48,675 | INFO     | current chi2=1.301824099207504 (change=52.55986220309914 %)
[2026-05-04 11:49:02] 2026-05-04 15:47:48,676 | INFO     | sum of square deviations: 5577693980.11073
[2026-05-04 11:49:02] 2026-05-04 15:47:48,678 | INFO     | sum of deviations: 37719986655.526726
[2026-05-04 11:49:02] 2026-05-04 15:47:48,678 | INFO     | mean x (centered): 0.0
[2026-05-04 11:49:02] 2026-05-04 15:47:48,678 | INFO     | mean y: 2705202.419847328
[2026-05-04 11:49:02] 2026-05-04 15:47:48,704 | INFO     | intersect: 2705202.419847328
[2026-05-04 11:49:02] 2026-05-04 15:47:48,705 | INFO     | chi2: 1.302255824459263
[2026-05-04 11:49:02] 2026-05-04 15:47:48,705 | INFO     | current chi2=1.302255824459263 (change=-0.033163101837011405 %)
[2026-05-04 11:49:02] 2026-05-04 15:47:48,705 | INFO     | right removable region: 261
[2026-05-04 11:49:02] 2026-05-04 15:47:48,706 | INFO     | sum of square deviations: 5902995434.636704
[2026-05-04 11:49:02] 2026-05-04 15:47:48,708 | INFO     | sum of deviations: -37408234791.48689
[2026-05-04 11:49:02] 2026-05-04 15:47:48,734 | INFO     | mean x (centered): 0.0
[2026-05-04 11:49:02] 2026-05-04 15:47:48,734 | INFO     | mean y: 2706413.2097378275
[2026-05-04 11:49:02] 2026-05-04 15:47:48,735 | INFO     | intersect: 2706413.2097378275
[2026-05-04 11:49:02] 2026-05-04 15:47:48,735 | INFO     | chi2: 1.5018143107159565
[2026-05-04 11:49:02] 2026-05-04 15:47:48,735 | INFO     | current chi2=1.5018143107159565 (change=45.27196271055789 %)
[2026-05-04 11:49:02] 2026-05-04 15:47:48,736 | INFO     | sum of square deviations: 5577487989.954182
[2026-05-04 11:49:02] 2026-05-04 15:47:48,738 | INFO     | sum of deviations: -32860202059.541985
[2026-05-04 11:49:02] 2026-05-04 15:47:48,738 | INFO     | mean x (centered): 0.0
[2026-05-04 11:49:02] 2026-05-04 15:47:48,738 | INFO     | mean y: 2704287.900763359
[2026-05-04 11:49:02] 2026-05-04 15:47:48,764 | INFO     | intersect: 2704287.900763359
[2026-05-04 11:49:02] 2026-05-04 15:47:48,765 | INFO     | chi2: 1.4702326766783425
[2026-05-04 11:49:02] 2026-05-04 15:47:48,765 | INFO     | current chi2=1.4702326766783425 (change=2.10289872804303 %)
[2026-05-04 11:49:02] 2026-05-04 15:47:48,765 | INFO     | left removable region: 10
[2026-05-04 11:49:02] 2026-05-04 15:47:48,766 | INFO     | sum of square deviations: 4904159811.808771
[2026-05-04 11:49:02] 2026-05-04 15:47:48,768 | INFO     | sum of deviations: 3273983515.812747
[2026-05-04 11:49:02] 2026-05-04 15:47:48,768 | INFO     | mean x (centered): 0.0
[2026-05-04 11:49:02] 2026-05-04 15:47:48,768 | INFO     | mean y: 2721672.852589641
[2026-05-04 11:49:02] 2026-05-04 15:47:48,768 | INFO     | intersect: 2721672.852589641
[2026-05-04 11:49:02] 2026-05-04 15:47:48,800 | INFO     | chi2: 0.001779831333331307
[2026-05-04 11:49:02] 2026-05-04 15:47:48,800 | INFO     | current memory leak: 0.67 B/s (using 251 data points, chi2=0.00)
[2026-05-04 11:49:02] 2026-05-04 15:47:48,801 | INFO     | could have reported an average CPU frequency of 2620 MHz (13 samples)
[2026-05-04 11:49:02] 2026-05-04 15:47:48,801 | INFO     | ..............................
[2026-05-04 11:49:02] 2026-05-04 15:47:48,801 | INFO     | . Timing measurements:
[2026-05-04 11:49:02] 2026-05-04 15:47:48,801 | INFO     | . get job = 0 s
[2026-05-04 11:49:02] 2026-05-04 15:47:48,801 | INFO     | . initial setup = 6 s
[2026-05-04 11:49:02] 2026-05-04 15:47:48,801 | INFO     | . payload setup = 8 s
[2026-05-04 11:49:02] 2026-05-04 15:47:48,801 | INFO     | . stage-in = 0 s
[2026-05-04 11:49:02] 2026-05-04 15:47:48,801 | INFO     | . payload execution = 16549 s
[2026-05-04 11:49:02] 2026-05-04 15:47:48,802 | INFO     | . stage-out = 8 s
[2026-05-04 11:49:02] 2026-05-04 15:47:48,802 | INFO     | . log creation = 1 s
[2026-05-04 11:49:02] 2026-05-04 15:47:48,802 | INFO     | ..............................
[2026-05-04 11:49:02] 2026-05-04 15:47:50,105 | INFO     | 
[2026-05-04 11:49:02] 2026-05-04 15:47:50,106 | INFO     | job summary report
[2026-05-04 11:49:02] 2026-05-04 15:47:50,106 | INFO     | --------------------------------------------------
[2026-05-04 11:49:02] 2026-05-04 15:47:50,106 | INFO     | PanDA job id: 7128689155
[2026-05-04 11:49:02] 2026-05-04 15:47:50,106 | INFO     | task id: 50010682
[2026-05-04 11:49:02] 2026-05-04 15:47:50,106 | INFO     | errors: (none)
[2026-05-04 11:49:02] 2026-05-04 15:47:50,106 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 11:49:02] 2026-05-04 15:47:50,106 | INFO     | pilot state: finished 
[2026-05-04 11:49:02] 2026-05-04 15:47:50,106 | INFO     | transexitcode: 0
[2026-05-04 11:49:02] 2026-05-04 15:47:50,106 | INFO     | exeerrorcode: 0
[2026-05-04 11:49:02] 2026-05-04 15:47:50,106 | INFO     | exeerrordiag: 
[2026-05-04 11:49:02] 2026-05-04 15:47:50,107 | INFO     | exitcode: 0
[2026-05-04 11:49:02] 2026-05-04 15:47:50,107 | INFO     | exitmsg: OK
[2026-05-04 11:49:02] 2026-05-04 15:47:50,107 | INFO     | cpuconsumptiontime: 42470 s
[2026-05-04 11:49:02] 2026-05-04 15:47:50,107 | INFO     | nevents: 400
[2026-05-04 11:49:02] 2026-05-04 15:47:50,107 | INFO     | neventsw: 0
[2026-05-04 11:49:02] 2026-05-04 15:47:50,108 | INFO     | pid: 53789
[2026-05-04 11:49:02] 2026-05-04 15:47:50,108 | INFO     | pgrp: 53789
[2026-05-04 11:49:02] 2026-05-04 15:47:50,108 | INFO     | corecount: 12
[2026-05-04 11:49:02] 2026-05-04 15:47:50,108 | INFO     | event service: False
[2026-05-04 11:49:02] 2026-05-04 15:47:50,108 | INFO     | sizes: {0: 2270429, 1: 2272258, 11: 2272258, 16563: 2304138, 16564: 2304137, 16573: 2313370, 16576: 2313508}
[2026-05-04 11:49:02] 2026-05-04 15:47:50,108 | INFO     | --------------------------------------------------
[2026-05-04 11:49:02] 2026-05-04 15:47:50,108 | INFO     | 
[2026-05-04 11:49:02] 2026-05-04 15:47:50,108 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-04 11:49:02] 2026-05-04 15:47:50,165 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,165 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,165 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,165 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,167 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 11:49:02] 2026-05-04 15:47:50,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,167 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 11:49:02] 2026-05-04 15:47:50,167 | INFO     | job 7128689155 has completed (purged errors)
[2026-05-04 11:49:02] 2026-05-04 15:47:50,167 | INFO     | overall cleanup function is called
[2026-05-04 11:49:02] 2026-05-04 15:47:51,182 | INFO     | --- collectZombieJob: --- 10, [53789]
[2026-05-04 11:49:02] 2026-05-04 15:47:51,183 | INFO     | zombie collector waiting for pid 53789
[2026-05-04 11:49:02] 2026-05-04 15:47:51,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 11:49:02] 2026-05-04 15:47:51,187 | INFO     | collected zombie processes
[2026-05-04 11:49:02] 2026-05-04 15:47:51,187 | INFO     | will attempt to kill all subprocesses of pid=53789
[2026-05-04 11:49:02] 2026-05-04 15:47:53,283 | INFO     | process IDs to be killed: [53789] (in reverse order)
[2026-05-04 11:49:02] 2026-05-04 15:47:53,966 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 11:49:02] 2026-05-04 15:47:53,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 11:49:02] 2026-05-04 15:47:53,974 | INFO     | did not find any defunct processes belonging to 53789
[2026-05-04 11:49:02] 2026-05-04 15:47:53,981 | INFO     | did not find any defunct processes belonging to 53789
[2026-05-04 11:49:02] 2026-05-04 15:47:53,981 | INFO     | Ready for new job
[2026-05-04 11:49:02] 2026-05-04 15:47:53,983 | INFO     | ***************************************
[2026-05-04 11:49:02] 2026-05-04 15:47:53,983 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 11:49:02] 2026-05-04 15:47:53,983 | INFO     | ***************************************
[2026-05-04 11:49:02] 2026-05-04 15:47:53,984 | INFO     | 
[2026-05-04 11:49:02] 2026-05-04 15:47:53,985 | INFO     | architecture information:
[2026-05-04 11:49:02] 2026-05-04 15:47:53,986 | INFO     | executing command: cat /etc/os-release
[2026-05-04 11:49:02] 2026-05-04 15:47:54,005 | INFO     | cat /etc/os-release:
[2026-05-04 11:49:02] NAME="CentOS Linux"
[2026-05-04 11:49:02] VERSION="7 (Core)"
[2026-05-04 11:49:02] ID="centos"
[2026-05-04 11:49:02] ID_LIKE="rhel fedora"
[2026-05-04 11:49:02] VERSION_ID="7"
[2026-05-04 11:49:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 11:49:02] ANSI_COLOR="0;31"
[2026-05-04 11:49:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 11:49:02] HOME_URL="https://www.centos.org/"
[2026-05-04 11:49:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 11:49:02] 
[2026-05-04 11:49:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 11:49:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 11:49:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 11:49:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 11:49:02] 
[2026-05-04 11:49:02] 2026-05-04 15:47:54,005 | INFO     | ***************************************
[2026-05-04 11:49:02] 2026-05-04 15:47:54,508 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-04 11:49:02] 2026-05-04 15:47:54,662 | INFO     | sufficient remaining disk space (53158608896 B)
[2026-05-04 11:49:02] 2026-05-04 15:47:54,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 11:49:02] 2026-05-04 15:47:54,662 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 11:49:02] 2026-05-04 15:47:54,662 | INFO     | update_server=False
[2026-05-04 11:49:02] 2026-05-04 15:47:54,663 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 11:49:02] 2026-05-04 15:47:54,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 11:49:02] 2026-05-04 15:47:54,972 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-04 11:49:02] 2026-05-04 15:47:54,973 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-04 11:49:02] 2026-05-04 15:47:54,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 11:49:02] 2026-05-04 15:47:54,973 | INFO     | will abort loop
[2026-05-04 11:49:02] 2026-05-04 15:47:55,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 11:49:02] 2026-05-04 15:47:55,547 | INFO     | all job control threads have been joined
[2026-05-04 11:49:02] 2026-05-04 15:47:55,683 | INFO     | all data control threads have been joined
[2026-05-04 11:49:02] 2026-05-04 15:47:55,684 | INFO     | [job] retrieve thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:55,749 | INFO     | all payload control threads have been joined
[2026-05-04 11:49:02] 2026-05-04 15:47:55,978 | INFO     | [job] job monitor thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:55,981 | INFO     | [payload] failed_post thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,260 | INFO     | [job] queue monitor thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,472 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,553 | INFO     | [job] control thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,637 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,641 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,645 | INFO     | [job] validate thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,660 | INFO     | [payload] validate_post thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,715 | INFO     | [data] control thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,719 | INFO     | [data] copytool_out thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,725 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:56,785 | INFO     | [payload] control thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:57,112 | INFO     | [data] copytool_in thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:47:57,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 11:49:02] 2026-05-04 15:48:01,679 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 11:49:02] 2026-05-04 15:48:24,025 | INFO     | PID=49345 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-04 11:49:02] 2026-05-04 15:48:24,026 | INFO     | .. there are 7 such processes running
[2026-05-04 11:49:02] 2026-05-04 15:48:24,027 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 11:49:02] 2026-05-04 15:48:24,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 11:49:02] 2026-05-04 15:48:24,027 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 11:49:02] 2026-05-04 15:48:54,017 | INFO     | [monitor] cgroup control has ended
[2026-05-04 11:49:02] 2026-05-04 15:48:55,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295706752832)>', '<ExcThread(monitor, started 140295349978880)>']
[2026-05-04 11:49:02] 2026-05-04 15:48:56,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 11:49:02] 2026-05-04 15:48:56,335 | INFO     | [monitor] control thread has ended
[2026-05-04 11:49:02] 2026-05-04 15:49:00,480 | INFO     | all workflow threads have been joined
[2026-05-04 11:49:02] 2026-05-04 15:49:00,480 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 11:49:02] 2026-05-04 15:49:00,481 | INFO     | traces error code: 0
[2026-05-04 11:49:02] 2026-05-04 15:49:00,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 11:49:02] 2026-05-04 15:49:00,949 [wrapper] ==== pilot stdout END ====
[2026-05-04 11:49:02] 2026-05-04 15:49:00,974 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 11:49:02] 2026-05-04 15:49:00,989 [wrapper] pilotpid: 49345
[2026-05-04 11:49:02] 2026-05-04 15:49:01,060 [wrapper] Pilot exit status: 0
[2026-05-04 11:49:02] 2026-05-04 15:49:01,230 [wrapper] pandaids: 7128689155
[2026-05-04 11:49:02] 2026-05-04 15:49:01,905 [wrapper] cleanup supervisor_pilot  440976 49346
[2026-05-04 11:49:02] 2026-05-04 15:49:01,926 [wrapper] Test setup, not cleaning
[2026-05-04 11:49:02] 2026-05-04 15:49:01,944 [wrapper] apfmon messages muted
[2026-05-04 11:49:02] 2026-05-04 15:49:01,965 [wrapper] ==== wrapper stdout END ====
[2026-05-04 11:49:02] 2026-05-04 15:49:02,026 [wrapper] ==== wrapper stderr END ====
[2026-05-04 11:49:02]  *** Error codes and diagnostics ***
[2026-05-04 11:49:02]     "exeErrorCode": 0,
[2026-05-04 11:49:02]     "pilotErrorCode": 0,
[2026-05-04 11:49:02]  *** Listing of results directory ***
[2026-05-04 11:49:02] total 407624
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas    683926 May  4 05:57 pilot3.tar.gz
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas      5631 May  4 06:00 queuedata.json
[2026-05-04 11:49:02] -rwx------. 1 boincer umatlas     36322 May  4 06:02 runpilot2-wrapper.sh
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas       100 May  4 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 11:49:02] -rwxr-xr-x. 1 boincer umatlas      7986 May  4 07:11 run_atlas
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas       105 May  4 07:11 job.xml
[2026-05-04 11:49:02] -rw-r--r--. 2 boincer umatlas 246674339 May  4 07:11 EVNT.50010680._000019.pool.root.1
[2026-05-04 11:49:02] -rw-r--r--. 2 boincer umatlas     15667 May  4 07:11 start_atlas.sh
[2026-05-04 11:49:02] drwxrwx--x. 2 boincer umatlas      4096 May  4 07:11 shared
[2026-05-04 11:49:02] -rw-r--r--. 2 boincer umatlas    697409 May  4 07:11 input.tar.gz
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas         0 May  4 07:11 boinc_lockfile
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas      2571 May  4 07:11 pandaJob.out
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas        57 May  4 07:11 setup.sh.local
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas   1002664 May  4 07:11 agis_schedconf.cvmfs.json
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas       442 May  4 07:11 workernode_map.json
[2026-05-04 11:49:02] drwx------. 5 boincer umatlas      4096 May  4 07:11 pilot3
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas      6574 May  4 11:36 init_data.xml
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas 162834883 May  4 11:45 HITS.50010682._001141.pool.root.1
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas       488 May  4 11:45 boinc_task_state.xml
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas      1041 May  4 11:47 memory_monitor_summary.json
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas   1505918 May  4 11:47 agis_ddmendpoints.agis.ALL.json
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas    472902 May  4 11:47 log.50010682._001141.job.log.tgz.1
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas      6406 May  4 11:47 heartbeat_new.json
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas      6297 May  4 11:47 heartbeat.json
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas        95 May  4 11:48 pilot_heartbeat.json
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas      8192 May  4 11:48 boinc_mmap_file
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas        28 May  4 11:48 wrapper_checkpoint.txt
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas      5006 May  4 11:49 pilotlog.txt
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas   1406813 May  4 11:49 log.50010682._001141.job.log.1
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas       357 May  4 11:49 output.list
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas       410 May  4 11:49 runtime_log
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas   1894400 May  4 11:49 result.tar.gz
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas      8967 May  4 11:49 runtime_log.err
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas       656 May  4 11:49 6e98986c9fe2.diag
[2026-05-04 11:49:02] -rw-r--r--. 1 boincer umatlas     21010 May  4 11:49 stderr.txt
[2026-05-04 11:49:02] HITS file was successfully produced:
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas 162834883 May  4 11:45 shared/HITS.pool.root.1
[2026-05-04 11:49:02]  *** Contents of shared directory: ***
[2026-05-04 11:49:02] total 402476
[2026-05-04 11:49:02] -rw-r--r--. 2 boincer umatlas 246674339 May  4 07:11 ATLAS.root_0
[2026-05-04 11:49:02] -rw-r--r--. 2 boincer umatlas     15667 May  4 07:11 start_atlas.sh
[2026-05-04 11:49:02] -rw-r--r--. 2 boincer umatlas    697409 May  4 07:11 input.tar.gz
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas 162834883 May  4 11:45 HITS.pool.root.1
[2026-05-04 11:49:02] -rw-------. 1 boincer umatlas   1894400 May  4 11:49 result.tar.gz
11:49:04 (45655): run_atlas exited; CPU time 42750.193521
11:49:04 (45655): called boinc_finish(0)

</stderr_txt>
]]>

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