Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:27:16 (1336749): wrapper (7.7.26015): starting
02:27:16 (1336749): wrapper: running run_atlas (--nthreads 4)
[2026-05-05 02:27:16] Arguments: --nthreads 4
[2026-05-05 02:27:16] Threads: 4
[2026-05-05 02:27:16] Checking for CVMFS
[2026-05-05 02:27:16] No cvmfs_config command found, will try listing directly
[2026-05-05 02:27:17] CVMFS is ok
[2026-05-05 02:27:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-05 02:27:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-05 02:27:17] Further information can be found at the LHC@home message board.
[2026-05-05 02:27:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-05 02:27:17] Checking for apptainer binary...
[2026-05-05 02:27:17] which: no apptainer in ((null))
[2026-05-05 02:27:17] apptainer is not installed, using version from CVMFS
[2026-05-05 02:27:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-05 02:27:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-05 02:27:17] apptainer works
[2026-05-05 02:27:17] Set ATHENA_PROC_NUMBER=4
[2026-05-05 02:27:17] Set ATHENA_CORE_NUMBER=4
[2026-05-05 02:27:17] Starting ATLAS job with PandaID=7128666391
[2026-05-05 02:27:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 05:25:04]  *** The last 200 lines of the pilot log: ***
[2026-05-05 05:25:04] 2026-05-05 03:24:04,846 | INFO     | .. there are 13 such processes running
[2026-05-05 05:25:04] 2026-05-05 03:24:05,063 | INFO     | monitor loop #767: job 0:7128666391 is in state 'finished'
[2026-05-05 05:25:04] 2026-05-05 03:24:05,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,602 | INFO     | job 7128666391 has state=finished
[2026-05-05 05:25:04] 2026-05-05 03:24:05,602 | INFO     | preparing for final server update for job 7128666391 in state='finished'
[2026-05-05 05:25:04] 2026-05-05 03:24:05,603 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/0/PanDA_Pilot-7128666391/jobReport.json
[2026-05-05 05:25:04] 2026-05-05 03:24:05,607 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/0/workernode_map.json
[2026-05-05 05:25:04] 2026-05-05 03:24:05,608 | INFO     | this job has now completed (state=finished)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,608 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,608 | INFO     | log transfer has been attempted: DONE
[2026-05-05 05:25:04] 2026-05-05 03:24:05,608 | INFO     | job 7128666391 has finished - writing final server update
[2026-05-05 05:25:04] 2026-05-05 03:24:05,609 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_888305/.job.ad'
[2026-05-05 05:25:04] 2026-05-05 03:24:05,609 | INFO     | total number of processed events: 400 (read)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,625 | INFO     | using path: /var/lib/boinc/var/slot60/slots/0/PanDA_Pilot-7128666391/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,626 | INFO     | extracted standard info from prmon json
[2026-05-05 05:25:04] 2026-05-05 03:24:05,626 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 05:25:04] 2026-05-05 03:24:05,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 05:25:04] 2026-05-05 03:24:05,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 05:25:04] 2026-05-05 03:24:05,631 | INFO     | fitting pss+swap vs Time
[2026-05-05 05:25:04] 2026-05-05 03:24:05,632 | INFO     | sum of square deviations: 1605470102.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,633 | INFO     | sum of deviations: 5024089076.000006
[2026-05-05 05:25:04] 2026-05-05 03:24:05,634 | INFO     | mean x (centered): 0.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,634 | INFO     | mean y: 2344820.1791907516
[2026-05-05 05:25:04] 2026-05-05 03:24:05,634 | INFO     | intersect: 2344820.1791907516
[2026-05-05 05:25:04] 2026-05-05 03:24:05,634 | INFO     | chi2: 1.2817540213254328
[2026-05-05 05:25:04] 2026-05-05 03:24:05,635 | INFO     | sum of square deviations: 1470248962.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,636 | INFO     | sum of deviations: 4910203570.500002
[2026-05-05 05:25:04] 2026-05-05 03:24:05,636 | INFO     | mean x (centered): 0.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,636 | INFO     | mean y: 2344691.720238095
[2026-05-05 05:25:04] 2026-05-05 03:24:05,637 | INFO     | intersect: 2344691.720238095
[2026-05-05 05:25:04] 2026-05-05 03:24:05,637 | INFO     | chi2: 1.2823673221530298
[2026-05-05 05:25:04] 2026-05-05 03:24:05,637 | INFO     | current chi2=1.2823673221530298 (change=-0.04784855888049637 %)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,637 | INFO     | right removable region: 167
[2026-05-05 05:25:04] 2026-05-05 03:24:05,638 | INFO     | sum of square deviations: 1470248962.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,639 | INFO     | sum of deviations: -15828377386.500002
[2026-05-05 05:25:04] 2026-05-05 03:24:05,639 | INFO     | mean x (centered): 0.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,639 | INFO     | mean y: 2367973.3273809524
[2026-05-05 05:25:04] 2026-05-05 03:24:05,639 | INFO     | intersect: 2367973.3273809524
[2026-05-05 05:25:04] 2026-05-05 03:24:05,640 | INFO     | chi2: 0.03532055741905261
[2026-05-05 05:25:04] 2026-05-05 03:24:05,640 | INFO     | current chi2=0.03532055741905261 (change=97.24435758878849 %)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,640 | INFO     | sum of square deviations: 1342841922.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,642 | INFO     | sum of deviations: -14657430628.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,642 | INFO     | mean x (centered): 0.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,642 | INFO     | mean y: 2366559.282208589
[2026-05-05 05:25:04] 2026-05-05 03:24:05,642 | INFO     | intersect: 2366559.282208589
[2026-05-05 05:25:04] 2026-05-05 03:24:05,642 | INFO     | chi2: 0.03428156912389126
[2026-05-05 05:25:04] 2026-05-05 03:24:05,643 | INFO     | current chi2=0.03428156912389126 (change=2.9415965406052553 %)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,643 | INFO     | left removable region: 10
[2026-05-05 05:25:04] 2026-05-05 03:24:05,643 | INFO     | sum of square deviations: 1199940638.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,644 | INFO     | sum of deviations: -14133079203.000002
[2026-05-05 05:25:04] 2026-05-05 03:24:05,644 | INFO     | mean x (centered): 0.0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,644 | INFO     | mean y: 2367231.280254777
[2026-05-05 05:25:04] 2026-05-05 03:24:05,645 | INFO     | intersect: 2367231.280254777
[2026-05-05 05:25:04] 2026-05-05 03:24:05,645 | INFO     | chi2: 0.0328006561362091
[2026-05-05 05:25:04] 2026-05-05 03:24:05,645 | INFO     | current memory leak: -11.78 B/s (using 157 data points, chi2=0.03)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,646 | INFO     | could have reported an average CPU frequency of 2525 MHz (9 samples)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,646 | INFO     | ..............................
[2026-05-05 05:25:04] 2026-05-05 03:24:05,646 | INFO     | . Timing measurements:
[2026-05-05 05:25:04] 2026-05-05 03:24:05,646 | INFO     | . get job = 0 s
[2026-05-05 05:25:04] 2026-05-05 03:24:05,646 | INFO     | . initial setup = 8 s
[2026-05-05 05:25:04] 2026-05-05 03:24:05,646 | INFO     | . payload setup = 11 s
[2026-05-05 05:25:04] 2026-05-05 03:24:05,646 | INFO     | . stage-in = 0 s
[2026-05-05 05:25:04] 2026-05-05 03:24:05,646 | INFO     | . payload execution = 10551 s
[2026-05-05 05:25:04] 2026-05-05 03:24:05,646 | INFO     | . stage-out = 0 s
[2026-05-05 05:25:04] 2026-05-05 03:24:05,647 | INFO     | . log creation = 0 s
[2026-05-05 05:25:04] 2026-05-05 03:24:05,647 | INFO     | ..............................
[2026-05-05 05:25:04] 2026-05-05 03:24:05,746 | INFO     | 
[2026-05-05 05:25:04] 2026-05-05 03:24:05,747 | INFO     | job summary report
[2026-05-05 05:25:04] 2026-05-05 03:24:05,747 | INFO     | --------------------------------------------------
[2026-05-05 05:25:04] 2026-05-05 03:24:05,747 | INFO     | PanDA job id: 7128666391
[2026-05-05 05:25:04] 2026-05-05 03:24:05,747 | INFO     | task id: 50011096
[2026-05-05 05:25:04] 2026-05-05 03:24:05,747 | INFO     | errors: (none)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,747 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 05:25:04] 2026-05-05 03:24:05,747 | INFO     | pilot state: finished 
[2026-05-05 05:25:04] 2026-05-05 03:24:05,747 | INFO     | transexitcode: 0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,747 | INFO     | exeerrorcode: 0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,747 | INFO     | exeerrordiag: 
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | exitcode: 0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | exitmsg: OK
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | cpuconsumptiontime: 39155 s
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | nevents: 400
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | neventsw: 0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | pid: 1345760
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | pgrp: 1345760
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | corecount: 4
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | event service: False
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | sizes: {0: 2260274, 1: 2272198, 11: 2272198, 10567: 2300922, 10568: 2309942, 10571: 2309998, 10573: 2310384}
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | --------------------------------------------------
[2026-05-05 05:25:04] 2026-05-05 03:24:05,748 | INFO     | 
[2026-05-05 05:25:04] 2026-05-05 03:24:05,749 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/0
[2026-05-05 05:25:04] 2026-05-05 03:24:05,771 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,772 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,772 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,772 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,773 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 05:25:04] 2026-05-05 03:24:05,774 | INFO     | job 7128666391 has completed (purged errors)
[2026-05-05 05:25:04] 2026-05-05 03:24:05,774 | INFO     | overall cleanup function is called
[2026-05-05 05:25:04] 2026-05-05 03:24:06,781 | INFO     | --- collectZombieJob: --- 10, [1345760]
[2026-05-05 05:25:04] 2026-05-05 03:24:06,782 | INFO     | zombie collector waiting for pid 1345760
[2026-05-05 05:25:04] 2026-05-05 03:24:06,782 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 05:25:04] 2026-05-05 03:24:06,782 | INFO     | collected zombie processes
[2026-05-05 05:25:04] 2026-05-05 03:24:06,782 | INFO     | will attempt to kill all subprocesses of pid=1345760
[2026-05-05 05:25:04] 2026-05-05 03:24:07,101 | INFO     | process IDs to be killed: [1345760] (in reverse order)
[2026-05-05 05:25:04] 2026-05-05 03:24:07,230 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 05:25:04] 2026-05-05 03:24:07,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 05:25:04] 2026-05-05 03:24:07,243 | INFO     | did not find any defunct processes belonging to 1345760
[2026-05-05 05:25:04] 2026-05-05 03:24:07,255 | INFO     | did not find any defunct processes belonging to 1345760
[2026-05-05 05:25:04] 2026-05-05 03:24:07,255 | INFO     | Ready for new job
[2026-05-05 05:25:04] 2026-05-05 03:24:07,257 | INFO     | ***************************************
[2026-05-05 05:25:04] 2026-05-05 03:24:07,257 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 05:25:04] 2026-05-05 03:24:07,257 | INFO     | ***************************************
[2026-05-05 05:25:04] 2026-05-05 03:24:07,257 | INFO     | 
[2026-05-05 05:25:04] 2026-05-05 03:24:07,261 | INFO     | architecture information:
[2026-05-05 05:25:04] 2026-05-05 03:24:07,261 | INFO     | executing command: cat /etc/os-release
[2026-05-05 05:25:04] 2026-05-05 03:24:07,281 | INFO     | cat /etc/os-release:
[2026-05-05 05:25:04] NAME="CentOS Linux"
[2026-05-05 05:25:04] VERSION="7 (Core)"
[2026-05-05 05:25:04] ID="centos"
[2026-05-05 05:25:04] ID_LIKE="rhel fedora"
[2026-05-05 05:25:04] VERSION_ID="7"
[2026-05-05 05:25:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 05:25:04] ANSI_COLOR="0;31"
[2026-05-05 05:25:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 05:25:04] HOME_URL="https://www.centos.org/"
[2026-05-05 05:25:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 05:25:04] 
[2026-05-05 05:25:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 05:25:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 05:25:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 05:25:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 05:25:04] 
[2026-05-05 05:25:04] 2026-05-05 03:24:07,281 | INFO     | ***************************************
[2026-05-05 05:25:04] 2026-05-05 03:24:07,784 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/0
[2026-05-05 05:25:04] 2026-05-05 03:24:07,803 | INFO     | sufficient remaining disk space (29892804608 B)
[2026-05-05 05:25:04] 2026-05-05 03:24:07,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 05:25:04] 2026-05-05 03:24:07,803 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 05:25:04] 2026-05-05 03:24:07,803 | INFO     | update_server=False
[2026-05-05 05:25:04] 2026-05-05 03:24:07,803 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 05:25:04] 2026-05-05 03:24:07,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 05:25:04] 2026-05-05 03:24:08,257 | INFO     | all payload control threads have been joined
[2026-05-05 05:25:04] 2026-05-05 03:24:08,440 | INFO     | all data control threads have been joined
[2026-05-05 05:25:04] 2026-05-05 03:24:08,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 05:25:04] 2026-05-05 03:24:08,570 | INFO     | aborting loop
[2026-05-05 05:25:04] 2026-05-05 03:24:08,809 | INFO     | [job] retrieve thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:08,991 | INFO     | [payload] validate_post thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:09,125 | INFO     | [payload] failed_post thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:09,262 | INFO     | [payload] control thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:09,278 | INFO     | all job control threads have been joined
[2026-05-05 05:25:04] 2026-05-05 03:24:09,445 | INFO     | [data] control thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:09,576 | INFO     | [job] job monitor thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:09,577 | INFO     | [job] validate thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:09,808 | INFO     | [data] copytool_out thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:09,855 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:09,901 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:09,969 | INFO     | [data] copytool_in thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:09,997 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:10,100 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:10,283 | INFO     | [job] control thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:10,511 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 05:25:04] 2026-05-05 03:24:10,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 05:25:04] 2026-05-05 03:24:11,761 | INFO     | [job] queue monitor thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:14,516 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 05:25:04] 2026-05-05 03:24:37,407 | INFO     | PID=1340865 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-05 05:25:04] 2026-05-05 03:24:37,407 | INFO     | .. there are 13 such processes running
[2026-05-05 05:25:04] 2026-05-05 03:24:37,408 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 05:25:04] 2026-05-05 03:24:37,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 05:25:04] 2026-05-05 03:24:37,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 05:25:04] 2026-05-05 03:24:59,071 | INFO     | [monitor] cgroup control has ended
[2026-05-05 05:25:04] 2026-05-05 03:24:59,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22865899579200)>', '<ExcThread(monitor, started 22865594271488)>']
[2026-05-05 05:25:04] 2026-05-05 03:24:59,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 05:25:04] 2026-05-05 03:24:59,513 | INFO     | [monitor] control thread has ended
[2026-05-05 05:25:04] 2026-05-05 03:25:04,291 | INFO     | all workflow threads have been joined
[2026-05-05 05:25:04] 2026-05-05 03:25:04,292 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 05:25:04] 2026-05-05 03:25:04,292 | INFO     | traces error code: 0
[2026-05-05 05:25:04] 2026-05-05 03:25:04,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 05:25:04] 2026-05-05 03:25:04,424 [wrapper] ==== pilot stdout END ====
[2026-05-05 05:25:04] 2026-05-05 03:25:04,426 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 05:25:04] 2026-05-05 03:25:04,429 [wrapper] pilotpid: 1340865
[2026-05-05 05:25:04] 2026-05-05 03:25:04,431 [wrapper] Pilot exit status: 0
[2026-05-05 05:25:04] 2026-05-05 03:25:04,442 [wrapper] pandaids: 7128666391
[2026-05-05 05:25:04] 2026-05-05 03:25:04,520 [wrapper] cleanup supervisor_pilot 1586347 1340866
[2026-05-05 05:25:04] 2026-05-05 03:25:04,524 [wrapper] Test setup, not cleaning
[2026-05-05 05:25:04] 2026-05-05 03:25:04,527 [wrapper] apfmon messages muted
[2026-05-05 05:25:04] 2026-05-05 03:25:04,529 [wrapper] ==== wrapper stdout END ====
[2026-05-05 05:25:04] 2026-05-05 03:25:04,532 [wrapper] ==== wrapper stderr END ====
[2026-05-05 05:25:04]  *** Error codes and diagnostics ***
[2026-05-05 05:25:04]     "exeErrorCode": 0,
[2026-05-05 05:25:04]     "pilotErrorCode": 0,
[2026-05-05 05:25:04]  *** Listing of results directory ***
[2026-05-05 05:25:04] total 405812
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc    683926 May  4 10:59 pilot3.tar.gz
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc      5631 May  4 11:23 queuedata.json
[2026-05-05 05:25:04] -rwx------. 1 boinc boinc     36322 May  4 11:24 runpilot2-wrapper.sh
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc       100 May  5 02:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 05:25:04] -rwxr-xr-x. 1 boinc boinc      7986 May  5 02:27 run_atlas
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc       105 May  5 02:27 job.xml
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc      6482 May  5 02:27 init_data.xml
[2026-05-05 05:25:04] -rw-r--r--. 2 boinc boinc 243203067 May  5 02:27 EVNT.50011094._000083.pool.root.1
[2026-05-05 05:25:04] -rw-r--r--. 2 boinc boinc     15667 May  5 02:27 start_atlas.sh
[2026-05-05 05:25:04] drwxrwx--x. 2 boinc boinc      4096 May  5 02:27 shared
[2026-05-05 05:25:04] -rw-r--r--. 2 boinc boinc    697409 May  5 02:27 input.tar.gz
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc         0 May  5 02:27 boinc_lockfile
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc      2523 May  5 02:27 pandaJob.out
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc   1002597 May  5 02:27 agis_schedconf.cvmfs.json
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc   1505918 May  5 02:27 agis_ddmendpoints.agis.ALL.json
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc       446 May  5 02:27 workernode_map.json
[2026-05-05 05:25:04] drwx------. 5 boinc boinc      4096 May  5 02:27 pilot3
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc 165643809 May  5 05:23 HITS.50011096._002049.pool.root.1
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc       488 May  5 05:23 boinc_task_state.xml
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc      1036 May  5 05:23 memory_monitor_summary.json
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc    291998 May  5 05:24 log.50011096._002049.job.log.tgz.1
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc        95 May  5 05:24 pilot_heartbeat.json
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc      6422 May  5 05:24 heartbeat_new.json
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc      6313 May  5 05:24 heartbeat.json
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc      8192 May  5 05:24 boinc_mmap_file
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc        28 May  5 05:24 wrapper_checkpoint.txt
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc      4832 May  5 05:25 pilotlog.txt
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc    992502 May  5 05:25 log.50011096._002049.job.log.1
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc       357 May  5 05:25 output.list
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc       410 May  5 05:25 runtime_log
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc   1300480 May  5 05:25 result.tar.gz
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc      8828 May  5 05:25 runtime_log.err
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc       665 May  5 05:25 65e4fe92a135.diag
[2026-05-05 05:25:04] -rw-r--r--. 1 boinc boinc     21072 May  5 05:25 stderr.txt
[2026-05-05 05:25:04] HITS file was successfully produced:
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc 165643809 May  5 05:23 shared/HITS.pool.root.1
[2026-05-05 05:25:04]  *** Contents of shared directory: ***
[2026-05-05 05:25:04] total 401248
[2026-05-05 05:25:04] -rw-r--r--. 2 boinc boinc 243203067 May  5 02:27 ATLAS.root_0
[2026-05-05 05:25:04] -rw-r--r--. 2 boinc boinc     15667 May  5 02:27 start_atlas.sh
[2026-05-05 05:25:04] -rw-r--r--. 2 boinc boinc    697409 May  5 02:27 input.tar.gz
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc 165643809 May  5 05:23 HITS.pool.root.1
[2026-05-05 05:25:04] -rw-------. 1 boinc boinc   1300480 May  5 05:25 result.tar.gz
05:25:06 (1336749): run_atlas exited; CPU time 39530.285250
05:25:06 (1336749): called boinc_finish(0)

</stderr_txt>
]]>

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