Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:39:50 (2560177): wrapper (7.7.26015): starting
06:39:50 (2560177): wrapper: running run_atlas (--nthreads 12)
[2026-05-06 06:39:50] Arguments: --nthreads 12
[2026-05-06 06:39:50] Threads: 12
[2026-05-06 06:39:50] Checking for CVMFS
[2026-05-06 06:39:50] No cvmfs_config command found, will try listing directly
[2026-05-06 06:39:51] CVMFS is ok
[2026-05-06 06:39:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-06 06:39:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-06 06:39:51] Further information can be found at the LHC@home message board.
[2026-05-06 06:39:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-06 06:39:51] Checking for apptainer binary...
[2026-05-06 06:39:51] which: no apptainer in ((null))
[2026-05-06 06:39:51] apptainer is not installed, using version from CVMFS
[2026-05-06 06:39:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-06 06:39:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/12/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-06 06:39:51] apptainer works
[2026-05-06 06:39:51] Set ATHENA_PROC_NUMBER=12
[2026-05-06 06:39:51] Set ATHENA_CORE_NUMBER=12
[2026-05-06 06:39:51] Starting ATLAS job with PandaID=7128666470
[2026-05-06 06:39:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-06 06:58:06]  *** The last 200 lines of the pilot log: ***
[2026-05-06 06:58:06]  domain=
[2026-05-06 06:58:06]  filesize=322910
[2026-05-06 06:58:06]  filetype=log
[2026-05-06 06:58:06]  guid=65baa343-baad-45af-8db1-27885550d302
[2026-05-06 06:58:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-06 06:58:06]  is_altstaged=None
[2026-05-06 06:58:06]  is_tar=False
[2026-05-06 06:58:06]  lfn=log.50011096._002128.job.log.tgz.1
[2026-05-06 06:58:06]  mtime=0
[2026-05-06 06:58:06]  protocol_id=None
[2026-05-06 06:58:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-06 06:58:06]  replicas=None
[2026-05-06 06:58:06]  scope=mc23_13p6TeV
[2026-05-06 06:58:06]  status=None
[2026-05-06 06:58:06]  status_code=0
[2026-05-06 06:58:06]  storage_token=
[2026-05-06 06:58:06]  surl=/var/lib/boinc/var/slot48/slots/12/PanDA_Pilot-7128666470/log.50011096._002128.job.log.tgz.1
[2026-05-06 06:58:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/cb/log.50011096._002128.job.log.tgz.1
[2026-05-06 06:58:06]  workdir=None
[2026-05-06 06:58:06] ]
[2026-05-06 06:58:06] 2026-05-06 04:56:58,677 | INFO     | transferring file log.50011096._002128.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/12/PanDA_Pilot-7128666470/log.50011096._002128.job.log.tgz.1 to /var/lib/
[2026-05-06 06:58:06] 2026-05-06 04:56:58,677 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/12/PanDA_Pilot-7128666470/log.50011096._002128.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/12/
[2026-05-06 06:58:06] 2026-05-06 04:56:58,686 | INFO     | adding to output.list: log.50011096._002128.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/cb/log.50011096._002128.job.log.tg
[2026-05-06 06:58:06] 2026-05-06 04:56:58,686 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-06 06:58:06] 2026-05-06 04:56:58,686 | INFO     | summary of transferred files:
[2026-05-06 06:58:06] 2026-05-06 04:56:58,686 | INFO     |  -- lfn=log.50011096._002128.job.log.tgz.1, status_code=0, status=transferred
[2026-05-06 06:58:06] 2026-05-06 04:56:58,686 | INFO     | stage-out finished correctly
[2026-05-06 06:58:06] 2026-05-06 04:56:58,706 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-06 06:58:06] 2026-05-06 04:56:58,726 | INFO     | job 7128666470 has state=finished
[2026-05-06 06:58:06] 2026-05-06 04:56:58,726 | INFO     | preparing for final server update for job 7128666470 in state='finished'
[2026-05-06 06:58:06] 2026-05-06 04:56:58,726 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/12/PanDA_Pilot-7128666470/jobReport.json
[2026-05-06 06:58:06] 2026-05-06 04:56:58,728 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/12/workernode_map.json
[2026-05-06 06:58:06] 2026-05-06 04:56:58,728 | INFO     | this job has now completed (state=finished)
[2026-05-06 06:58:06] 2026-05-06 04:56:58,728 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-06 06:58:06] 2026-05-06 04:56:58,728 | INFO     | log transfer has been attempted: DONE
[2026-05-06 06:58:06] 2026-05-06 04:56:58,728 | INFO     | job 7128666470 has finished - writing final server update
[2026-05-06 06:58:06] 2026-05-06 04:56:58,728 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2526695/.job.ad'
[2026-05-06 06:58:06] 2026-05-06 04:56:58,728 | INFO     | total number of processed events: 400 (read)
[2026-05-06 06:58:06] 2026-05-06 04:56:58,737 | INFO     | using path: /var/lib/boinc/var/slot48/slots/12/PanDA_Pilot-7128666470/memory_monitor_summary.json (trf name=prmon)
[2026-05-06 06:58:06] 2026-05-06 04:56:58,737 | INFO     | extracted standard info from prmon json
[2026-05-06 06:58:06] 2026-05-06 04:56:58,737 | INFO     | extracted standard memory fields from prmon json
[2026-05-06 06:58:06] 2026-05-06 04:56:58,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-06 06:58:06] 2026-05-06 04:56:58,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | fitting pss+swap vs Time
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | sum of square deviations: 306982.5
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | sum of deviations: 8574038.0
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | mean x (centered): 0.0
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | mean y: 3178850.0
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | intersect: 3178850.0
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | chi2: 3.119642478898996e-06
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | current memory leak: 27.93 B/s (using 10 data points, chi2=0.00)
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | could have reported an average CPU frequency of 3548 MHz (4 samples)
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | ..............................
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | . Timing measurements:
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | . get job = 0 s
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | . initial setup = 3 s
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | . payload setup = 3 s
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | . stage-in = 0 s
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | . payload execution = 1000 s
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | . stage-out = 0 s
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | . log creation = 0 s
[2026-05-06 06:58:06] 2026-05-06 04:56:58,738 | INFO     | ..............................
[2026-05-06 06:58:06] 2026-05-06 04:56:59,169 | INFO     | 
[2026-05-06 06:58:06] 2026-05-06 04:56:59,169 | INFO     | job summary report
[2026-05-06 06:58:06] 2026-05-06 04:56:59,169 | INFO     | --------------------------------------------------
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | PanDA job id: 7128666470
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | task id: 50011096
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | errors: (none)
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | pilot state: finished 
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | transexitcode: 0
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | exeerrorcode: 0
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | exeerrordiag: 
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | exitcode: 0
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | exitmsg: OK
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | cpuconsumptiontime: 10692 s
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | nevents: 400
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | neventsw: 0
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | pid: 2571123
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | pgrp: 2571123
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | corecount: 12
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | event service: False
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | sizes: {0: 2272164, 10: 2272164, 1008: 2296698, 1009: 2305914}
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | --------------------------------------------------
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | 
[2026-05-06 06:58:06] 2026-05-06 04:56:59,170 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/12
[2026-05-06 06:58:06] 2026-05-06 04:56:59,181 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | job 7128666470 has completed (purged errors)
[2026-05-06 06:58:06] 2026-05-06 04:56:59,182 | INFO     | overall cleanup function is called
[2026-05-06 06:58:06] 2026-05-06 04:57:00,189 | INFO     | --- collectZombieJob: --- 10, [2571123]
[2026-05-06 06:58:06] 2026-05-06 04:57:00,189 | INFO     | zombie collector waiting for pid 2571123
[2026-05-06 06:58:06] 2026-05-06 04:57:00,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-06 06:58:06] 2026-05-06 04:57:00,189 | INFO     | collected zombie processes
[2026-05-06 06:58:06] 2026-05-06 04:57:00,189 | INFO     | will attempt to kill all subprocesses of pid=2571123
[2026-05-06 06:58:06] 2026-05-06 04:57:00,333 | INFO     | process IDs to be killed: [2571123] (in reverse order)
[2026-05-06 06:58:06] 2026-05-06 04:57:00,413 | WARNING  | found no corresponding commands to process id(s)
[2026-05-06 06:58:06] 2026-05-06 04:57:00,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-06 06:58:06] 2026-05-06 04:57:00,429 | INFO     | did not find any defunct processes belonging to 2571123
[2026-05-06 06:58:06] 2026-05-06 04:57:00,439 | INFO     | did not find any defunct processes belonging to 2571123
[2026-05-06 06:58:06] 2026-05-06 04:57:00,439 | INFO     | Ready for new job
[2026-05-06 06:58:06] 2026-05-06 04:57:00,440 | INFO     | ***************************************
[2026-05-06 06:58:06] 2026-05-06 04:57:00,440 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-06 06:58:06] 2026-05-06 04:57:00,440 | INFO     | ***************************************
[2026-05-06 06:58:06] 2026-05-06 04:57:00,440 | INFO     | 
[2026-05-06 06:58:06] 2026-05-06 04:57:00,443 | INFO     | architecture information:
[2026-05-06 06:58:06] 2026-05-06 04:57:00,443 | INFO     | executing command: cat /etc/os-release
[2026-05-06 06:58:06] 2026-05-06 04:57:00,451 | INFO     | cat /etc/os-release:
[2026-05-06 06:58:06] NAME="CentOS Linux"
[2026-05-06 06:58:06] VERSION="7 (Core)"
[2026-05-06 06:58:06] ID="centos"
[2026-05-06 06:58:06] ID_LIKE="rhel fedora"
[2026-05-06 06:58:06] VERSION_ID="7"
[2026-05-06 06:58:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-06 06:58:06] ANSI_COLOR="0;31"
[2026-05-06 06:58:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-06 06:58:06] HOME_URL="https://www.centos.org/"
[2026-05-06 06:58:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-06 06:58:06] 
[2026-05-06 06:58:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-06 06:58:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-06 06:58:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-06 06:58:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-06 06:58:06] 
[2026-05-06 06:58:06] 2026-05-06 04:57:00,451 | INFO     | ***************************************
[2026-05-06 06:58:06] 2026-05-06 04:57:00,955 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/12
[2026-05-06 06:58:06] 2026-05-06 04:57:00,964 | INFO     | sufficient remaining disk space (271750004736 B)
[2026-05-06 06:58:06] 2026-05-06 04:57:00,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-06 06:58:06] 2026-05-06 04:57:00,965 | INFO     | current server update state: UPDATING_FINAL
[2026-05-06 06:58:06] 2026-05-06 04:57:00,965 | INFO     | update_server=False
[2026-05-06 06:58:06] 2026-05-06 04:57:00,965 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-06 06:58:06] 2026-05-06 04:57:00,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-06 06:58:06] 2026-05-06 04:57:01,108 | INFO     | all data control threads have been joined
[2026-05-06 06:58:06] 2026-05-06 04:57:01,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-06 06:58:06] 2026-05-06 04:57:01,970 | INFO     | [job] retrieve thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:02,113 | INFO     | [data] control thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:02,135 | INFO     | [payload] failed_post thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:02,300 | INFO     | all payload control threads have been joined
[2026-05-06 06:58:06] 2026-05-06 04:57:02,320 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:02,475 | INFO     | all job control threads have been joined
[2026-05-06 06:58:06] 2026-05-06 04:57:02,843 | INFO     | [payload] execute_payloads thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:03,170 | INFO     | [payload] validate_post thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:03,207 | INFO     | [job] validate thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:03,241 | INFO     | [payload] validate_pre thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:03,243 | INFO     | [job] create_data_payload thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:03,305 | INFO     | [payload] control thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:03,398 | INFO     | [data] copytool_in thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:03,481 | INFO     | [job] control thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:03,717 | INFO     | [data] copytool_out thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:03,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-06 06:58:06] 2026-05-06 04:57:04,062 | WARNING  | process 2571123 can no longer be monitored (due to stat problems) - aborting
[2026-05-06 06:58:06] 2026-05-06 04:57:04,193 | INFO     | using path: /var/lib/boinc/var/slot48/slots/12/memory_monitor_summary.json (trf name=prmon)
[2026-05-06 06:58:06] 2026-05-06 04:57:04,339 | INFO     | number of running child processes to parent process 2571123: 1
[2026-05-06 06:58:06] 2026-05-06 04:57:04,339 | INFO     | maximum number of monitored processes: 6
[2026-05-06 06:58:06] 2026-05-06 04:57:04,339 | INFO     | aborting job monitoring since job object (job id=7128666470) has expired
[2026-05-06 06:58:06] 2026-05-06 04:57:04,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-06 06:58:06] 2026-05-06 04:57:04,339 | INFO     | will abort loop
[2026-05-06 06:58:06] 2026-05-06 04:57:04,778 | INFO     | [job] queue monitor thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:04,971 | INFO     | [data] queue_monitor thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:05,344 | INFO     | [job] job monitor thread has finished
[2026-05-06 06:58:06] 2026-05-06 04:57:32,198 | INFO     | PID=2565141 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-06 06:58:06] 2026-05-06 04:57:32,199 | INFO     | found 0 job(s) in 20 queues
[2026-05-06 06:58:06] 2026-05-06 04:57:32,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-06 06:58:06] 2026-05-06 04:57:32,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-06 06:58:06] 2026-05-06 04:57:59,510 | INFO     | [monitor] cgroup control has ended
[2026-05-06 06:58:06] 2026-05-06 04:58:01,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22423794861888)>', '<ExcThread(monitor, started 22423560009472)>']
[2026-05-06 06:58:06] 2026-05-06 04:58:02,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-06 06:58:06] 2026-05-06 04:58:02,344 | INFO     | [monitor] control thread has ended
[2026-05-06 06:58:06] 2026-05-06 04:58:06,425 | INFO     | all workflow threads have been joined
[2026-05-06 06:58:06] 2026-05-06 04:58:06,425 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-06 06:58:06] 2026-05-06 04:58:06,425 | INFO     | traces error code: 0
[2026-05-06 06:58:06] 2026-05-06 04:58:06,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-06 06:58:06] 2026-05-06 04:58:06,497 [wrapper] ==== pilot stdout END ====
[2026-05-06 06:58:06] 2026-05-06 04:58:06,499 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-06 06:58:06] 2026-05-06 04:58:06,501 [wrapper] pilotpid: 2565141
[2026-05-06 06:58:06] 2026-05-06 04:58:06,503 [wrapper] Pilot exit status: 0
[2026-05-06 06:58:06] 2026-05-06 04:58:06,510 [wrapper] pandaids: 7128666470
[2026-05-06 06:58:06] 2026-05-06 04:58:06,578 [wrapper] cleanup supervisor_pilot 2588534 2565142
[2026-05-06 06:58:06] 2026-05-06 04:58:06,579 [wrapper] Test setup, not cleaning
[2026-05-06 06:58:06] 2026-05-06 04:58:06,583 [wrapper] apfmon messages muted
[2026-05-06 06:58:06] 2026-05-06 04:58:06,584 [wrapper] ==== wrapper stdout END ====
[2026-05-06 06:58:06] 2026-05-06 04:58:06,585 [wrapper] ==== wrapper stderr END ====
[2026-05-06 06:58:06]  *** Error codes and diagnostics ***
[2026-05-06 06:58:06]     "exeErrorCode": 0,
[2026-05-06 06:58:06]     "pilotErrorCode": 0,
[2026-05-06 06:58:06]  *** Listing of results directory ***
[2026-05-06 06:58:06] total 612892
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc    683926 May  4 10:59 pilot3.tar.gz
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc      5631 May  4 11:21 queuedata.json
[2026-05-06 06:58:06] -rwx------. 1 boinc boinc     36322 May  4 11:21 runpilot2-wrapper.sh
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc       100 May  6 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-06 06:58:06] -rwxr-xr-x. 1 boinc boinc      7986 May  6 04:52 run_atlas
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc       105 May  6 04:52 job.xml
[2026-05-06 06:58:06] -rw-------. 2 boinc boinc 214695936 May  6 04:56 copy_SRCHsf
[2026-05-06 06:58:06] -rw-r--r--. 2 boinc boinc 243440378 May  6 06:39 EVNT.50011094._000086.pool.root.1
[2026-05-06 06:58:06] -rw-r--r--. 2 boinc boinc     15667 May  6 06:39 start_atlas.sh
[2026-05-06 06:58:06] drwxrwx--x. 2 boinc boinc      4096 May  6 06:39 shared
[2026-05-06 06:58:06] -rw-r--r--. 2 boinc boinc    697402 May  6 06:39 input.tar.gz
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc      6629 May  6 06:39 init_data.xml
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc         0 May  6 06:39 boinc_lockfile
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc      2516 May  6 06:39 pandaJob.out
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc   1001375 May  6 06:39 agis_schedconf.cvmfs.json
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc   1505918 May  6 06:39 agis_ddmendpoints.agis.ALL.json
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc       441 May  6 06:39 workernode_map.json
[2026-05-06 06:58:06] drwx------. 5 boinc boinc      4096 May  6 06:39 pilot3
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc       488 May  6 06:56 boinc_task_state.xml
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc 164393627 May  6 06:56 HITS.50011096._002128.pool.root.1
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc      1023 May  6 06:56 memory_monitor_summary.json
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc    322910 May  6 06:56 log.50011096._002128.job.log.tgz.1
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc      6355 May  6 06:56 heartbeat_new.json
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc      6246 May  6 06:56 heartbeat.json
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc        95 May  6 06:57 pilot_heartbeat.json
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc      8192 May  6 06:58 boinc_mmap_file
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc        27 May  6 06:58 wrapper_checkpoint.txt
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc      5291 May  6 06:58 pilotlog.txt
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc    143889 May  6 06:58 log.50011096._002128.job.log.1
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc       357 May  6 06:58 output.list
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc       410 May  6 06:58 runtime_log
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc    481280 May  6 06:58 result.tar.gz
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc      8846 May  6 06:58 runtime_log.err
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc       658 May  6 06:58 652e305c95ab.diag
[2026-05-06 06:58:06] -rw-r--r--. 1 boinc boinc     20938 May  6 06:58 stderr.txt
[2026-05-06 06:58:06] HITS file was successfully produced:
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc 164393627 May  6 06:56 shared/HITS.pool.root.1
[2026-05-06 06:58:06]  *** Contents of shared directory: ***
[2026-05-06 06:58:06] total 609128
[2026-05-06 06:58:06] -rw-------. 2 boinc boinc 214695936 May  6 04:56 copy_SRCHsf
[2026-05-06 06:58:06] -rw-r--r--. 2 boinc boinc 243440378 May  6 06:39 ATLAS.root_0
[2026-05-06 06:58:06] -rw-r--r--. 2 boinc boinc     15667 May  6 06:39 start_atlas.sh
[2026-05-06 06:58:06] -rw-r--r--. 2 boinc boinc    697402 May  6 06:39 input.tar.gz
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc 164393627 May  6 06:56 HITS.pool.root.1
[2026-05-06 06:58:06] -rw-------. 1 boinc boinc    481280 May  6 06:58 result.tar.gz
06:58:07 (2560177): run_atlas exited; CPU time 10697.980833
06:58:07 (2560177): called boinc_finish(0)

</stderr_txt>
]]>

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