Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:59:15 (6337): wrapper (7.7.26015): starting
14:59:15 (6337): wrapper: running run_atlas (--nthreads 8)
[2026-05-04 14:59:15] Arguments: --nthreads 8
[2026-05-04 14:59:15] Threads: 8
[2026-05-04 14:59:15] Checking for CVMFS
[2026-05-04 14:59:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 14:59:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 14:59:19] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 14:59:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 14:59:20] 2.11.2.0 25269 27099 99976 159205 2 54 13086248 25165824 96 130560 0 14893122 99.932 6480606 9025 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-04 14:59:20] CVMFS is ok
[2026-05-04 14:59:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 14:59:20] Checking for apptainer binary...
[2026-05-04 14:59:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 14:59:20] Running /usr/bin/apptainer --version
[2026-05-04 14:59:20] apptainer version 1.3.2-1.el7
[2026-05-04 14:59:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 14:59:36] cg-vwn441.simple-grid.lan
[2026-05-04 14:59:36] apptainer works
[2026-05-04 14:59:36] Set ATHENA_PROC_NUMBER=8
[2026-05-04 14:59:36] Set ATHENA_CORE_NUMBER=8
[2026-05-04 14:59:36] Starting ATLAS job with PandaID=7128584729
[2026-05-04 14:59:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 18:42:51]  *** The last 200 lines of the pilot log: ***
[2026-05-04 18:42:51] 2026-05-04 16:41:53,014 | INFO     | log transfer has been attempted: DONE
[2026-05-04 18:42:51] 2026-05-04 16:41:53,014 | INFO     | job 7128584729 has finished - writing final server update
[2026-05-04 18:42:51] 2026-05-04 16:41:53,014 | INFO     | total number of processed events: 400 (read)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,017 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7128584729/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,017 | INFO     | extracted standard info from prmon json
[2026-05-04 18:42:51] 2026-05-04 16:41:53,017 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 18:42:51] 2026-05-04 16:41:53,018 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 18:42:51] 2026-05-04 16:41:53,018 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 18:42:51] 2026-05-04 16:41:53,022 | INFO     | fitting pss+swap vs Time
[2026-05-04 18:42:51] 2026-05-04 16:41:53,023 | INFO     | sum of square deviations: 2710627567.5
[2026-05-04 18:42:51] 2026-05-04 16:41:53,025 | INFO     | sum of deviations: 142595561759.99997
[2026-05-04 18:42:51] 2026-05-04 16:41:53,025 | INFO     | mean x (centered): 0.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,025 | INFO     | mean y: 2682108.485436893
[2026-05-04 18:42:51] 2026-05-04 16:41:53,025 | INFO     | intersect: 2682108.485436893
[2026-05-04 18:42:51] 2026-05-04 16:41:53,026 | INFO     | chi2: 8.5454850552304
[2026-05-04 18:42:51] 2026-05-04 16:41:53,026 | INFO     | sum of square deviations: 2518000700.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,028 | INFO     | sum of deviations: 153658456795.00006
[2026-05-04 18:42:51] 2026-05-04 16:41:53,028 | INFO     | mean x (centered): 0.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,028 | INFO     | mean y: 2690633.0099502485
[2026-05-04 18:42:51] 2026-05-04 16:41:53,028 | INFO     | intersect: 2690633.0099502485
[2026-05-04 18:42:51] 2026-05-04 16:41:53,028 | INFO     | chi2: 7.88111892220291
[2026-05-04 18:42:51] 2026-05-04 16:41:53,029 | INFO     | current chi2=7.88111892220291 (change=7.774469544251944 %)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,029 | INFO     | right removable region: 200
[2026-05-04 18:42:51] 2026-05-04 16:41:53,029 | INFO     | sum of square deviations: 2518000700.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,031 | INFO     | sum of deviations: 61751004366.999985
[2026-05-04 18:42:51] 2026-05-04 16:41:53,031 | INFO     | mean x (centered): 0.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,031 | INFO     | mean y: 2746082.268656716
[2026-05-04 18:42:51] 2026-05-04 16:41:53,031 | INFO     | intersect: 2746082.268656716
[2026-05-04 18:42:51] 2026-05-04 16:41:53,031 | INFO     | chi2: 3.2627217994825912
[2026-05-04 18:42:51] 2026-05-04 16:41:53,032 | INFO     | current chi2=3.2627217994825912 (change=61.819349300885015 %)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,032 | INFO     | sum of square deviations: 2334722845.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,034 | INFO     | sum of deviations: 6511749420.500002
[2026-05-04 18:42:51] 2026-05-04 16:41:53,034 | INFO     | mean x (centered): 0.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,034 | INFO     | mean y: 2791878.5969387754
[2026-05-04 18:42:51] 2026-05-04 16:41:53,034 | INFO     | intersect: 2791878.5969387754
[2026-05-04 18:42:51] 2026-05-04 16:41:53,034 | INFO     | chi2: 0.8705340060238391
[2026-05-04 18:42:51] 2026-05-04 16:41:53,034 | INFO     | current chi2=0.8705340060238391 (change=73.3187792424751 %)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,035 | INFO     | sum of square deviations: 2160561440.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,036 | INFO     | sum of deviations: -4253696896.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,036 | INFO     | mean x (centered): 0.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,036 | INFO     | mean y: 2801217.5916230367
[2026-05-04 18:42:51] 2026-05-04 16:41:53,037 | INFO     | intersect: 2801217.5916230367
[2026-05-04 18:42:51] 2026-05-04 16:41:53,037 | INFO     | chi2: 0.7586416770918275
[2026-05-04 18:42:51] 2026-05-04 16:41:53,037 | INFO     | current chi2=0.7586416770918275 (change=12.853297878974242 %)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,037 | INFO     | left removable region: 15
[2026-05-04 18:42:51] 2026-05-04 16:41:53,038 | INFO     | sum of square deviations: 1963274020.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,039 | INFO     | sum of deviations: 9418854510.999998
[2026-05-04 18:42:51] 2026-05-04 16:41:53,039 | INFO     | mean x (centered): 0.0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,039 | INFO     | mean y: 2813559.210810811
[2026-05-04 18:42:51] 2026-05-04 16:41:53,039 | INFO     | intersect: 2813559.210810811
[2026-05-04 18:42:51] 2026-05-04 16:41:53,046 | INFO     | chi2: 0.002440991945816955
[2026-05-04 18:42:51] 2026-05-04 16:41:53,046 | INFO     | current memory leak: 4.80 B/s (using 185 data points, chi2=0.00)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,047 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,047 | INFO     | ..............................
[2026-05-04 18:42:51] 2026-05-04 16:41:53,047 | INFO     | . Timing measurements:
[2026-05-04 18:42:51] 2026-05-04 16:41:53,047 | INFO     | . get job = 0 s
[2026-05-04 18:42:51] 2026-05-04 16:41:53,047 | INFO     | . initial setup = 124 s
[2026-05-04 18:42:51] 2026-05-04 16:41:53,047 | INFO     | . payload setup = 254 s
[2026-05-04 18:42:51] 2026-05-04 16:41:53,047 | INFO     | . stage-in = 0 s
[2026-05-04 18:42:51] 2026-05-04 16:41:53,048 | INFO     | . payload execution = 12654 s
[2026-05-04 18:42:51] 2026-05-04 16:41:53,048 | INFO     | . stage-out = 4 s
[2026-05-04 18:42:51] 2026-05-04 16:41:53,048 | INFO     | . log creation = 1 s
[2026-05-04 18:42:51] 2026-05-04 16:41:53,048 | INFO     | ..............................
[2026-05-04 18:42:51] 2026-05-04 16:41:53,192 | INFO     | 
[2026-05-04 18:42:51] 2026-05-04 16:41:53,192 | INFO     | job summary report
[2026-05-04 18:42:51] 2026-05-04 16:41:53,192 | INFO     | --------------------------------------------------
[2026-05-04 18:42:51] 2026-05-04 16:41:53,192 | INFO     | PanDA job id: 7128584729
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | task id: 50010997
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | errors: (none)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | pilot state: finished 
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | transexitcode: 0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | exeerrorcode: 0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | exeerrordiag: 
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | exitcode: 0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | exitmsg: OK
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | cpuconsumptiontime: 47276 s
[2026-05-04 18:42:51] 2026-05-04 16:41:53,193 | INFO     | nevents: 400
[2026-05-04 18:42:51] 2026-05-04 16:41:53,194 | INFO     | neventsw: 0
[2026-05-04 18:42:51] 2026-05-04 16:41:53,194 | INFO     | pid: 14837
[2026-05-04 18:42:51] 2026-05-04 16:41:53,194 | INFO     | pgrp: 14837
[2026-05-04 18:42:51] 2026-05-04 16:41:53,194 | INFO     | corecount: 8
[2026-05-04 18:42:51] 2026-05-04 16:41:53,194 | INFO     | event service: False
[2026-05-04 18:42:51] 2026-05-04 16:41:53,194 | INFO     | sizes: {0: 2269736, 1: 2270421, 2: 2272250, 13: 2272250, 12914: 2302277, 12918: 2311275, 12920: 2311459, 12921: 2311653}
[2026-05-04 18:42:51] 2026-05-04 16:41:53,194 | INFO     | --------------------------------------------------
[2026-05-04 18:42:51] 2026-05-04 16:41:53,194 | INFO     | 
[2026-05-04 18:42:51] 2026-05-04 16:41:53,194 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-04 18:42:51] 2026-05-04 16:41:53,657 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,657 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,658 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,658 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,659 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,659 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 18:42:51] 2026-05-04 16:41:53,660 | INFO     | job 7128584729 has completed (purged errors)
[2026-05-04 18:42:51] 2026-05-04 16:41:53,660 | INFO     | overall cleanup function is called
[2026-05-04 18:42:51] 2026-05-04 16:41:54,669 | INFO     | --- collectZombieJob: --- 10, [14837]
[2026-05-04 18:42:51] 2026-05-04 16:41:54,669 | INFO     | zombie collector waiting for pid 14837
[2026-05-04 18:42:51] 2026-05-04 16:41:54,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 18:42:51] 2026-05-04 16:41:54,669 | INFO     | collected zombie processes
[2026-05-04 18:42:51] 2026-05-04 16:41:54,669 | INFO     | will attempt to kill all subprocesses of pid=14837
[2026-05-04 18:42:51] 2026-05-04 16:41:54,725 | INFO     | process IDs to be killed: [14837] (in reverse order)
[2026-05-04 18:42:51] 2026-05-04 16:41:55,529 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 18:42:51] 2026-05-04 16:41:55,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 18:42:51] 2026-05-04 16:41:55,532 | INFO     | did not find any defunct processes belonging to 14837
[2026-05-04 18:42:51] 2026-05-04 16:41:55,534 | INFO     | did not find any defunct processes belonging to 14837
[2026-05-04 18:42:51] 2026-05-04 16:41:55,534 | INFO     | Ready for new job
[2026-05-04 18:42:51] 2026-05-04 16:41:55,536 | INFO     | ***************************************
[2026-05-04 18:42:51] 2026-05-04 16:41:55,536 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 18:42:51] 2026-05-04 16:41:55,536 | INFO     | ***************************************
[2026-05-04 18:42:51] 2026-05-04 16:41:55,536 | INFO     | 
[2026-05-04 18:42:51] 2026-05-04 16:41:55,537 | INFO     | pilot is running in a VM
[2026-05-04 18:42:51] 2026-05-04 16:41:55,537 | INFO     | architecture information:
[2026-05-04 18:42:51] 2026-05-04 16:41:55,538 | INFO     | executing command: cat /etc/os-release
[2026-05-04 18:42:51] 2026-05-04 16:41:55,643 | INFO     | cat /etc/os-release:
[2026-05-04 18:42:51] NAME="CentOS Linux"
[2026-05-04 18:42:51] VERSION="7 (Core)"
[2026-05-04 18:42:51] ID="centos"
[2026-05-04 18:42:51] ID_LIKE="rhel fedora"
[2026-05-04 18:42:51] VERSION_ID="7"
[2026-05-04 18:42:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 18:42:51] ANSI_COLOR="0;31"
[2026-05-04 18:42:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 18:42:51] HOME_URL="https://www.centos.org/"
[2026-05-04 18:42:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 18:42:51] 
[2026-05-04 18:42:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 18:42:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 18:42:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 18:42:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 18:42:51] 
[2026-05-04 18:42:51] 2026-05-04 16:41:55,643 | INFO     | ***************************************
[2026-05-04 18:42:51] 2026-05-04 16:41:56,147 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-04 18:42:51] 2026-05-04 16:41:56,309 | INFO     | sufficient remaining disk space (497008246784 B)
[2026-05-04 18:42:51] 2026-05-04 16:41:56,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 18:42:51] 2026-05-04 16:41:56,309 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 18:42:51] 2026-05-04 16:41:56,309 | INFO     | update_server=False
[2026-05-04 18:42:51] 2026-05-04 16:41:56,309 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 18:42:51] 2026-05-04 16:41:56,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 18:42:51] 2026-05-04 16:41:56,609 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-04 18:42:51] 2026-05-04 16:41:56,609 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-04 18:42:51] 2026-05-04 16:41:56,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 18:42:51] 2026-05-04 16:41:56,609 | INFO     | will abort loop
[2026-05-04 18:42:51] 2026-05-04 16:41:56,850 | INFO     | all data control threads have been joined
[2026-05-04 18:42:51] 2026-05-04 16:41:57,169 | INFO     | all payload control threads have been joined
[2026-05-04 18:42:51] 2026-05-04 16:41:57,316 | INFO     | [job] retrieve thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:57,432 | INFO     | all job control threads have been joined
[2026-05-04 18:42:51] 2026-05-04 16:41:57,613 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:57,615 | INFO     | [job] job monitor thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:57,816 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:57,856 | INFO     | [data] control thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:57,998 | INFO     | [data] copytool_in thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:58,097 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:58,175 | INFO     | [payload] control thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:58,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 18:42:51] 2026-05-04 16:41:58,318 | INFO     | [data] copytool_out thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:58,438 | INFO     | [job] control thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:58,563 | INFO     | [payload] failed_post thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:58,585 | INFO     | [job] validate thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:58,627 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:58,697 | INFO     | [payload] validate_post thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:41:59,016 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 18:42:51] 2026-05-04 16:41:59,221 | INFO     | [job] queue monitor thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:42:03,025 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 18:42:51] 2026-05-04 16:42:26,727 | INFO     | PID=10349 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-04 18:42:51] 2026-05-04 16:42:26,728 | INFO     | .. there are 2 such processes running
[2026-05-04 18:42:51] 2026-05-04 16:42:26,728 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 18:42:51] 2026-05-04 16:42:26,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 18:42:51] 2026-05-04 16:42:26,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 18:42:51] 2026-05-04 16:42:41,131 | INFO     | [monitor] cgroup control has ended
[2026-05-04 18:42:51] 2026-05-04 16:42:42,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064372594496)>', '<ExcThread(monitor, started 140063706965760)>']
[2026-05-04 18:42:51] 2026-05-04 16:42:43,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 18:42:51] 2026-05-04 16:42:43,830 | INFO     | [monitor] control thread has ended
[2026-05-04 18:42:51] 2026-05-04 16:42:47,922 | INFO     | all workflow threads have been joined
[2026-05-04 18:42:51] 2026-05-04 16:42:47,922 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 18:42:51] 2026-05-04 16:42:47,922 | INFO     | traces error code: 0
[2026-05-04 18:42:51] 2026-05-04 16:42:47,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 18:42:51] 2026-05-04 16:42:48,279 [wrapper] ==== pilot stdout END ====
[2026-05-04 18:42:51] 2026-05-04 16:42:48,386 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 18:42:51] 2026-05-04 16:42:48,448 [wrapper] pilotpid: 10349
[2026-05-04 18:42:51] 2026-05-04 16:42:48,540 [wrapper] Pilot exit status: 0
[2026-05-04 18:42:51] 2026-05-04 16:42:48,778 [wrapper] pandaids: 7128584729
[2026-05-04 18:42:51] 2026-05-04 16:42:48,820 [wrapper] cleanup supervisor_pilot 21220 10350
[2026-05-04 18:42:51] 2026-05-04 16:42:48,835 [wrapper] Test setup, not cleaning
[2026-05-04 18:42:51] 2026-05-04 16:42:48,845 [wrapper] apfmon messages muted
[2026-05-04 18:42:51] 2026-05-04 16:42:48,887 [wrapper] ==== wrapper stdout END ====
[2026-05-04 18:42:51] 2026-05-04 16:42:48,956 [wrapper] ==== wrapper stderr END ====
[2026-05-04 18:42:51]  *** Error codes and diagnostics ***
[2026-05-04 18:42:51]     "exeErrorCode": 0,
[2026-05-04 18:42:51]     "pilotErrorCode": 0,
[2026-05-04 18:42:51]  *** Listing of results directory ***
[2026-05-04 18:42:51] total 402712
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc    683926 May  4 09:56 pilot3.tar.gz
[2026-05-04 18:42:51] -rwx------. 1 boinc boinc     36322 May  4 09:57 runpilot2-wrapper.sh
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc      5631 May  4 09:57 queuedata.json
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc       100 May  4 14:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 18:42:51] -rwxr-xr-x. 1 boinc boinc      7986 May  4 14:59 run_atlas
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc       105 May  4 14:59 job.xml
[2026-05-04 18:42:51] -rw-r--r--. 2 boinc boinc 242948842 May  4 14:59 EVNT.50010994._000083.pool.root.1
[2026-05-04 18:42:51] -rw-r--r--. 2 boinc boinc     15667 May  4 14:59 start_atlas.sh
[2026-05-04 18:42:51] drwxrwx--x. 2 boinc boinc        68 May  4 14:59 shared
[2026-05-04 18:42:51] -rw-r--r--. 2 boinc boinc    697397 May  4 14:59 input.tar.gz
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc      6307 May  4 14:59 init_data.xml
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc         0 May  4 14:59 boinc_lockfile
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc      2540 May  4 14:59 pandaJob.out
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc       415 May  4 15:06 workernode_map.json
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc   1002663 May  4 15:06 agis_schedconf.cvmfs.json
[2026-05-04 18:42:51] drwx------. 5 boinc boinc      4096 May  4 15:06 pilot3
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc 162128714 May  4 18:40 HITS.50010997._001466.pool.root.1
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc       489 May  4 18:40 boinc_task_state.xml
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc      1010 May  4 18:41 memory_monitor_summary.json
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc        95 May  4 18:41 pilot_heartbeat.json
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc   1505918 May  4 18:41 agis_ddmendpoints.agis.ALL.json
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc    377922 May  4 18:41 log.50010997._001466.job.log.tgz.1
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc      6330 May  4 18:41 heartbeat_new.json
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc      6221 May  4 18:41 heartbeat.json
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc      8192 May  4 18:42 boinc_mmap_file
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc        28 May  4 18:42 wrapper_checkpoint.txt
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc      5069 May  4 18:42 pilotlog.txt
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc   1210179 May  4 18:42 log.50010997._001466.job.log.1
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc       357 May  4 18:42 output.list
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc       410 May  4 18:42 runtime_log
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc   1607680 May  4 18:42 result.tar.gz
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc      8439 May  4 18:42 runtime_log.err
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc       655 May  4 18:42 5165d93eb234.diag
[2026-05-04 18:42:51] -rw-r--r--. 1 boinc boinc     20628 May  4 18:42 stderr.txt
[2026-05-04 18:42:51] HITS file was successfully produced:
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc 162128714 May  4 18:40 shared/HITS.pool.root.1
[2026-05-04 18:42:51]  *** Contents of shared directory: ***
[2026-05-04 18:42:51] total 397860
[2026-05-04 18:42:51] -rw-r--r--. 2 boinc boinc 242948842 May  4 14:59 ATLAS.root_0
[2026-05-04 18:42:51] -rw-r--r--. 2 boinc boinc     15667 May  4 14:59 start_atlas.sh
[2026-05-04 18:42:51] -rw-r--r--. 2 boinc boinc    697397 May  4 14:59 input.tar.gz
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc 162128714 May  4 18:40 HITS.pool.root.1
[2026-05-04 18:42:51] -rw-------. 1 boinc boinc   1607680 May  4 18:42 result.tar.gz
18:42:52 (6337): run_atlas exited; CPU time 47383.424406
18:42:52 (6337): called boinc_finish(0)

</stderr_txt>
]]>

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