Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:21:39 (27260): wrapper (7.7.26015): starting
21:21:39 (27260): wrapper: running run_atlas (--nthreads 8)
[2026-05-04 21:21:39] Arguments: --nthreads 8
[2026-05-04 21:21:39] Threads: 8
[2026-05-04 21:21:39] Checking for CVMFS
[2026-05-04 21:21:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 21:21:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 21:21:44] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 21:21:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 21:21:45] 2.11.2.0 3305 27497 102020 159214 2 53 14077869 25165824 96 130560 0 9572102 99.958 2303823 2799 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-04 21:21:45] CVMFS is ok
[2026-05-04 21:21:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 21:21:45] Checking for apptainer binary...
[2026-05-04 21:21:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 21:21:45] Running /usr/bin/apptainer --version
[2026-05-04 21:21:45] apptainer version 1.3.2-1.el7
[2026-05-04 21:21:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 21:22:01] cg-vwn370.simple-grid.lan
[2026-05-04 21:22:01] apptainer works
[2026-05-04 21:22:01] Set ATHENA_PROC_NUMBER=8
[2026-05-04 21:22:01] Set ATHENA_CORE_NUMBER=8
[2026-05-04 21:22:01] Starting ATLAS job with PandaID=7128648404
[2026-05-04 21:22:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 01:28:53]  *** The last 200 lines of the pilot log: ***
[2026-05-05 01:28:53] 2026-05-04 23:27:39,119 | INFO     | total number of processed events: 400 (read)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,121 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7128648404/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,122 | INFO     | extracted standard info from prmon json
[2026-05-05 01:28:53] 2026-05-04 23:27:39,122 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 01:28:53] 2026-05-04 23:27:39,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 01:28:53] 2026-05-04 23:27:39,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 01:28:53] 2026-05-04 23:27:39,127 | INFO     | fitting pss+swap vs Time
[2026-05-05 01:28:53] 2026-05-04 23:27:39,128 | INFO     | sum of square deviations: 3723716330.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,130 | INFO     | sum of deviations: 106456145676.00002
[2026-05-05 01:28:53] 2026-05-04 23:27:39,130 | INFO     | mean x (centered): 0.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,130 | INFO     | mean y: 2435575.8296943232
[2026-05-05 01:28:53] 2026-05-04 23:27:39,130 | INFO     | intersect: 2435575.8296943232
[2026-05-05 01:28:53] 2026-05-04 23:27:39,131 | INFO     | chi2: 9.365449093674712
[2026-05-05 01:28:53] 2026-05-04 23:27:39,131 | INFO     | sum of square deviations: 3485088600.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,133 | INFO     | sum of deviations: 119212476412.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,133 | INFO     | mean x (centered): 0.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,133 | INFO     | mean y: 2443555.1071428573
[2026-05-05 01:28:53] 2026-05-04 23:27:39,134 | INFO     | intersect: 2443555.1071428573
[2026-05-05 01:28:53] 2026-05-04 23:27:39,134 | INFO     | chi2: 8.688066137401579
[2026-05-05 01:28:53] 2026-05-04 23:27:39,138 | INFO     | current chi2=8.688066137401579 (change=7.232786698190777 %)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,138 | INFO     | right removable region: 223
[2026-05-05 01:28:53] 2026-05-04 23:27:39,139 | INFO     | sum of square deviations: 3485088600.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,141 | INFO     | sum of deviations: 24284476156.5
[2026-05-05 01:28:53] 2026-05-04 23:27:39,141 | INFO     | mean x (centered): 0.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,141 | INFO     | mean y: 2488068.6473214286
[2026-05-05 01:28:53] 2026-05-04 23:27:39,141 | INFO     | intersect: 2488068.6473214286
[2026-05-05 01:28:53] 2026-05-04 23:27:39,141 | INFO     | chi2: 3.8914232258517854
[2026-05-05 01:28:53] 2026-05-04 23:27:39,142 | INFO     | current chi2=3.8914232258517854 (change=58.449155113341064 %)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,142 | INFO     | sum of square deviations: 3256879670.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,144 | INFO     | sum of deviations: -37018241864.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,144 | INFO     | mean x (centered): 0.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,144 | INFO     | mean y: 2528970.7305936073
[2026-05-05 01:28:53] 2026-05-04 23:27:39,144 | INFO     | intersect: 2528970.7305936073
[2026-05-05 01:28:53] 2026-05-04 23:27:39,144 | INFO     | chi2: 1.0648015730987714
[2026-05-05 01:28:53] 2026-05-04 23:27:39,144 | INFO     | current chi2=1.0648015730987714 (change=72.63722007863332 %)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,145 | INFO     | sum of square deviations: 3038856977.5
[2026-05-05 01:28:53] 2026-05-04 23:27:39,146 | INFO     | sum of deviations: -46379266697.5
[2026-05-05 01:28:53] 2026-05-04 23:27:39,147 | INFO     | mean x (centered): 0.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,147 | INFO     | mean y: 2535468.042056075
[2026-05-05 01:28:53] 2026-05-04 23:27:39,147 | INFO     | intersect: 2535468.042056075
[2026-05-05 01:28:53] 2026-05-04 23:27:39,147 | INFO     | chi2: 0.9495103220506049
[2026-05-05 01:28:53] 2026-05-04 23:27:39,147 | INFO     | current chi2=0.9495103220506049 (change=10.827486919712886 %)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,147 | INFO     | left removable region: 15
[2026-05-05 01:28:53] 2026-05-04 23:27:39,148 | INFO     | sum of square deviations: 2790348132.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,149 | INFO     | sum of deviations: -31029806197.5
[2026-05-05 01:28:53] 2026-05-04 23:27:39,150 | INFO     | mean x (centered): 0.0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,150 | INFO     | mean y: 2546523.543269231
[2026-05-05 01:28:53] 2026-05-04 23:27:39,150 | INFO     | intersect: 2546523.543269231
[2026-05-05 01:28:53] 2026-05-04 23:27:39,150 | INFO     | chi2: 0.15546745891369632
[2026-05-05 01:28:53] 2026-05-04 23:27:39,150 | INFO     | current memory leak: -11.12 B/s (using 208 data points, chi2=0.16)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,151 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,151 | INFO     | ..............................
[2026-05-05 01:28:53] 2026-05-04 23:27:39,151 | INFO     | . Timing measurements:
[2026-05-05 01:28:53] 2026-05-04 23:27:39,151 | INFO     | . get job = 0 s
[2026-05-05 01:28:53] 2026-05-04 23:27:39,152 | INFO     | . initial setup = 120 s
[2026-05-05 01:28:53] 2026-05-04 23:27:39,152 | INFO     | . payload setup = 258 s
[2026-05-05 01:28:53] 2026-05-04 23:27:39,152 | INFO     | . stage-in = 0 s
[2026-05-05 01:28:53] 2026-05-04 23:27:39,152 | INFO     | . payload execution = 14077 s
[2026-05-05 01:28:53] 2026-05-04 23:27:39,152 | INFO     | . stage-out = 3 s
[2026-05-05 01:28:53] 2026-05-04 23:27:39,152 | INFO     | . log creation = 1 s
[2026-05-05 01:28:53] 2026-05-04 23:27:39,152 | INFO     | ..............................
[2026-05-05 01:28:53] 2026-05-04 23:27:39,305 | INFO     | 
[2026-05-05 01:28:53] 2026-05-04 23:27:39,305 | INFO     | job summary report
[2026-05-05 01:28:53] 2026-05-04 23:27:39,305 | INFO     | --------------------------------------------------
[2026-05-05 01:28:53] 2026-05-04 23:27:39,305 | INFO     | PanDA job id: 7128648404
[2026-05-05 01:28:53] 2026-05-04 23:27:39,305 | INFO     | task id: 50010710
[2026-05-05 01:28:53] 2026-05-04 23:27:39,305 | INFO     | errors: (none)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,306 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 01:28:53] 2026-05-04 23:27:39,306 | INFO     | pilot state: finished 
[2026-05-05 01:28:53] 2026-05-04 23:27:39,306 | INFO     | transexitcode: 0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,306 | INFO     | exeerrorcode: 0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,306 | INFO     | exeerrordiag: 
[2026-05-05 01:28:53] 2026-05-04 23:27:39,306 | INFO     | exitcode: 0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,306 | INFO     | exitmsg: OK
[2026-05-05 01:28:53] 2026-05-04 23:27:39,306 | INFO     | cpuconsumptiontime: 52153 s
[2026-05-05 01:28:53] 2026-05-04 23:27:39,306 | INFO     | nevents: 400
[2026-05-05 01:28:53] 2026-05-04 23:27:39,306 | INFO     | neventsw: 0
[2026-05-05 01:28:53] 2026-05-04 23:27:39,307 | INFO     | pid: 3368
[2026-05-05 01:28:53] 2026-05-04 23:27:39,307 | INFO     | pgrp: 3368
[2026-05-05 01:28:53] 2026-05-04 23:27:39,307 | INFO     | corecount: 8
[2026-05-05 01:28:53] 2026-05-04 23:27:39,307 | INFO     | event service: False
[2026-05-05 01:28:53] 2026-05-04 23:27:39,307 | INFO     | sizes: {0: 2269687, 1: 2270372, 2: 2272201, 3: 2272201, 13: 2272229, 14340: 2303101, 14344: 2312099, 14346: 2312155, 14348: 2312349}
[2026-05-05 01:28:53] 2026-05-04 23:27:39,307 | INFO     | --------------------------------------------------
[2026-05-05 01:28:53] 2026-05-04 23:27:39,307 | INFO     | 
[2026-05-05 01:28:53] 2026-05-04 23:27:39,307 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-05 01:28:53] 2026-05-04 23:27:39,654 | INFO     | PID=31248 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-05 01:28:53] 2026-05-04 23:27:39,654 | INFO     | .. there are 2 such processes running
[2026-05-05 01:28:53] 2026-05-04 23:27:39,863 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,863 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,863 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,863 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,864 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,864 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,864 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,864 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,870 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,870 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,870 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,870 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,870 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,870 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,870 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 01:28:53] 2026-05-04 23:27:39,871 | INFO     | job 7128648404 has completed (purged errors)
[2026-05-05 01:28:53] 2026-05-04 23:27:39,871 | INFO     | overall cleanup function is called
[2026-05-05 01:28:53] 2026-05-04 23:27:40,890 | INFO     | --- collectZombieJob: --- 10, [3368]
[2026-05-05 01:28:53] 2026-05-04 23:27:40,890 | INFO     | zombie collector waiting for pid 3368
[2026-05-05 01:28:53] 2026-05-04 23:27:40,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 01:28:53] 2026-05-04 23:27:40,891 | INFO     | collected zombie processes
[2026-05-05 01:28:53] 2026-05-04 23:27:40,891 | INFO     | will attempt to kill all subprocesses of pid=3368
[2026-05-05 01:28:53] 2026-05-04 23:27:40,942 | INFO     | process IDs to be killed: [3368] (in reverse order)
[2026-05-05 01:28:53] 2026-05-04 23:27:41,778 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 01:28:53] 2026-05-04 23:27:41,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 01:28:53] 2026-05-04 23:27:41,780 | INFO     | did not find any defunct processes belonging to 3368
[2026-05-05 01:28:53] 2026-05-04 23:27:41,782 | INFO     | did not find any defunct processes belonging to 3368
[2026-05-05 01:28:53] 2026-05-04 23:27:41,782 | INFO     | Ready for new job
[2026-05-05 01:28:53] 2026-05-04 23:27:41,784 | INFO     | ***************************************
[2026-05-05 01:28:53] 2026-05-04 23:27:41,784 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 01:28:53] 2026-05-04 23:27:41,785 | INFO     | ***************************************
[2026-05-05 01:28:53] 2026-05-04 23:27:41,785 | INFO     | 
[2026-05-05 01:28:53] 2026-05-04 23:27:41,785 | INFO     | pilot is running in a VM
[2026-05-05 01:28:53] 2026-05-04 23:27:41,786 | INFO     | architecture information:
[2026-05-05 01:28:53] 2026-05-04 23:27:41,791 | INFO     | executing command: cat /etc/os-release
[2026-05-05 01:28:53] 2026-05-04 23:27:42,029 | INFO     | cat /etc/os-release:
[2026-05-05 01:28:53] NAME="CentOS Linux"
[2026-05-05 01:28:53] VERSION="7 (Core)"
[2026-05-05 01:28:53] ID="centos"
[2026-05-05 01:28:53] ID_LIKE="rhel fedora"
[2026-05-05 01:28:53] VERSION_ID="7"
[2026-05-05 01:28:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 01:28:53] ANSI_COLOR="0;31"
[2026-05-05 01:28:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 01:28:53] HOME_URL="https://www.centos.org/"
[2026-05-05 01:28:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 01:28:53] 
[2026-05-05 01:28:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 01:28:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 01:28:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 01:28:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 01:28:53] 
[2026-05-05 01:28:53] 2026-05-04 23:27:42,029 | INFO     | ***************************************
[2026-05-05 01:28:53] 2026-05-04 23:27:42,532 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-05 01:28:53] 2026-05-04 23:27:42,701 | INFO     | sufficient remaining disk space (495836987392 B)
[2026-05-05 01:28:53] 2026-05-04 23:27:42,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 01:28:53] 2026-05-04 23:27:42,701 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 01:28:53] 2026-05-04 23:27:42,702 | INFO     | update_server=False
[2026-05-05 01:28:53] 2026-05-04 23:27:42,702 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 01:28:53] 2026-05-04 23:27:43,107 | INFO     | all data control threads have been joined
[2026-05-05 01:28:53] 2026-05-04 23:27:43,156 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-05 01:28:53] 2026-05-04 23:27:43,157 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-05 01:28:53] 2026-05-04 23:27:43,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 01:28:53] 2026-05-04 23:27:43,157 | INFO     | will abort loop
[2026-05-05 01:28:53] 2026-05-04 23:27:43,550 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 01:28:53] 2026-05-04 23:27:43,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 01:28:53] 2026-05-04 23:27:43,707 | INFO     | [job] retrieve thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:43,743 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:43,891 | INFO     | [data] copytool_in thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:43,912 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:44,113 | INFO     | [data] control thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:44,119 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:44,162 | INFO     | [job] job monitor thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:44,182 | INFO     | all payload control threads have been joined
[2026-05-05 01:28:53] 2026-05-04 23:27:44,230 | INFO     | all job control threads have been joined
[2026-05-05 01:28:53] 2026-05-04 23:27:44,268 | INFO     | [payload] failed_post thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:44,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 01:28:53] 2026-05-04 23:27:44,624 | INFO     | [job] validate thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:44,907 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:45,152 | INFO     | [payload] validate_post thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:45,188 | INFO     | [payload] control thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:45,236 | INFO     | [job] control thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:45,325 | INFO     | [job] queue monitor thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:45,588 | INFO     | [data] copytool_out thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:27:47,559 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 01:28:53] 2026-05-04 23:28:11,798 | INFO     | PID=31248 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-05 01:28:53] 2026-05-04 23:28:11,798 | INFO     | .. there are 2 such processes running
[2026-05-05 01:28:53] 2026-05-04 23:28:11,806 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 01:28:53] 2026-05-04 23:28:11,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 01:28:53] 2026-05-04 23:28:11,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 01:28:53] 2026-05-04 23:28:42,235 | INFO     | [monitor] cgroup control has ended
[2026-05-05 01:28:53] 2026-05-04 23:28:42,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677171042112)>', '<ExcThread(monitor, started 140676729652992)>']
[2026-05-05 01:28:53] 2026-05-04 23:28:42,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 01:28:53] 2026-05-04 23:28:42,992 | INFO     | [monitor] control thread has ended
[2026-05-05 01:28:53] 2026-05-04 23:28:47,610 | INFO     | all workflow threads have been joined
[2026-05-05 01:28:53] 2026-05-04 23:28:47,610 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 01:28:53] 2026-05-04 23:28:47,611 | INFO     | traces error code: 0
[2026-05-05 01:28:53] 2026-05-04 23:28:47,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 01:28:53] 2026-05-04 23:28:48,145 [wrapper] ==== pilot stdout END ====
[2026-05-05 01:28:53] 2026-05-04 23:28:48,241 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 01:28:53] 2026-05-04 23:28:48,358 [wrapper] pilotpid: 31248
[2026-05-05 01:28:53] 2026-05-04 23:28:48,457 [wrapper] Pilot exit status: 0
[2026-05-05 01:28:53] 2026-05-04 23:28:48,816 [wrapper] pandaids: 7128648404
[2026-05-05 01:28:53] 2026-05-04 23:28:49,931 [wrapper] cleanup supervisor_pilot 10430 31249
[2026-05-05 01:28:53] 2026-05-04 23:28:50,044 [wrapper] Test setup, not cleaning
[2026-05-05 01:28:53] 2026-05-04 23:28:50,172 [wrapper] apfmon messages muted
[2026-05-05 01:28:53] 2026-05-04 23:28:50,291 [wrapper] ==== wrapper stdout END ====
[2026-05-05 01:28:53] 2026-05-04 23:28:50,375 [wrapper] ==== wrapper stderr END ====
[2026-05-05 01:28:53]  *** Error codes and diagnostics ***
[2026-05-05 01:28:53]     "exeErrorCode": 0,
[2026-05-05 01:28:53]     "pilotErrorCode": 0,
[2026-05-05 01:28:53]  *** Listing of results directory ***
[2026-05-05 01:28:53] total 416532
[2026-05-05 01:28:53] -rwx------. 1 boinc boinc     36322 May  4 10:59 runpilot2-wrapper.sh
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc      5631 May  4 10:59 queuedata.json
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc    683926 May  4 10:59 pilot3.tar.gz
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc       100 May  4 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 01:28:53] -rwxr-xr-x. 1 boinc boinc      7986 May  4 21:21 run_atlas
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc       105 May  4 21:21 job.xml
[2026-05-05 01:28:53] -rw-r--r--. 2 boinc boinc 247167756 May  4 21:21 EVNT.50010707._000004.pool.root.1
[2026-05-05 01:28:53] -rw-r--r--. 2 boinc boinc    697381 May  4 21:21 input.tar.gz
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc      6307 May  4 21:21 init_data.xml
[2026-05-05 01:28:53] -rw-r--r--. 2 boinc boinc     15667 May  4 21:21 start_atlas.sh
[2026-05-05 01:28:53] drwxrwx--x. 2 boinc boinc        68 May  4 21:21 shared
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc         0 May  4 21:21 boinc_lockfile
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc      2514 May  4 21:22 pandaJob.out
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc       415 May  4 21:28 workernode_map.json
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc   1002597 May  4 21:28 agis_schedconf.cvmfs.json
[2026-05-05 01:28:53] drwx------. 5 boinc boinc      4096 May  4 21:28 pilot3
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc 171813393 May  5 01:26 HITS.50010710._000034.pool.root.1
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc       489 May  5 01:26 boinc_task_state.xml
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc      1016 May  5 01:27 memory_monitor_summary.json
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc   1505918 May  5 01:27 agis_ddmendpoints.agis.ALL.json
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc    388963 May  5 01:27 log.50010710._000034.job.log.tgz.1
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc      6333 May  5 01:27 heartbeat_new.json
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc      6224 May  5 01:27 heartbeat.json
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc        95 May  5 01:28 pilot_heartbeat.json
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc        28 May  5 01:28 wrapper_checkpoint.txt
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc      8192 May  5 01:28 boinc_mmap_file
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc      5069 May  5 01:28 pilotlog.txt
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc   1329108 May  5 01:28 log.50010710._000034.job.log.1
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc       357 May  5 01:28 output.list
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc       410 May  5 01:28 runtime_log
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc   1730560 May  5 01:28 result.tar.gz
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc      8439 May  5 01:28 runtime_log.err
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc       656 May  5 01:28 5feb6142db48.diag
[2026-05-05 01:28:53] -rw-r--r--. 1 boinc boinc     20733 May  5 01:28 stderr.txt
[2026-05-05 01:28:53] HITS file was successfully produced:
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc 171813393 May  5 01:26 shared/HITS.pool.root.1
[2026-05-05 01:28:53]  *** Contents of shared directory: ***
[2026-05-05 01:28:53] total 411556
[2026-05-05 01:28:53] -rw-r--r--. 2 boinc boinc 247167756 May  4 21:21 ATLAS.root_0
[2026-05-05 01:28:53] -rw-r--r--. 2 boinc boinc    697381 May  4 21:21 input.tar.gz
[2026-05-05 01:28:53] -rw-r--r--. 2 boinc boinc     15667 May  4 21:21 start_atlas.sh
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc 171813393 May  5 01:26 HITS.pool.root.1
[2026-05-05 01:28:53] -rw-------. 1 boinc boinc   1730560 May  5 01:28 result.tar.gz
01:28:55 (27260): run_atlas exited; CPU time 52281.956737
01:28:55 (27260): called boinc_finish(0)

</stderr_txt>
]]>

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