Name 5fa755d15111_0
Workunit 241159678
Created 4 May 2026, 8:59:00 UTC
Sent 4 May 2026, 8:59:21 UTC
Report deadline 12 May 2026, 8:59:21 UTC
Received 4 May 2026, 20:43:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 11041826
Run time 49 min 22 sec
CPU time 8 hours 36 min 50 sec
Priority 28
Validate state Valid
Credit 847.59
Device peak FLOPS 100.19 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.81 GB
Peak swap size 3.21 GB
Peak disk usage 873.62 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:39:45 (4193691): wrapper (7.7.26015): starting
18:39:45 (4193691): wrapper: running run_atlas (--nthreads 12)
[2026-05-04 18:39:45] Arguments: --nthreads 12
[2026-05-04 18:39:45] Threads: 12
[2026-05-04 18:39:45] Checking for CVMFS
[2026-05-04 18:39:45] No cvmfs_config command found, will try listing directly
[2026-05-04 18:39:45] CVMFS is ok
[2026-05-04 18:39:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 18:39:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 18:39:45] Further information can be found at the LHC@home message board.
[2026-05-04 18:39:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 18:39:45] Checking for apptainer binary...
[2026-05-04 18:39:45] which: no apptainer in ((null))
[2026-05-04 18:39:45] apptainer is not installed, using version from CVMFS
[2026-05-04 18:39:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 18:39:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/29/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-05-04 18:39:45] apptainer works
[2026-05-04 18:39:45] Set ATHENA_PROC_NUMBER=12
[2026-05-04 18:39:45] Set ATHENA_CORE_NUMBER=12
[2026-05-04 18:39:45] Starting ATLAS job with PandaID=7128648494
[2026-05-04 18:39:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/29 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:23:39 (750405): wrapper (7.7.26015): starting
20:23:39 (750405): wrapper: running run_atlas (--nthreads 12)
[2026-05-04 20:23:39] Arguments: --nthreads 12
[2026-05-04 20:23:39] Threads: 12
[2026-05-04 20:23:39] This job has been restarted, cleaning up previous attempt
[2026-05-04 20:23:39] Checking for CVMFS
[2026-05-04 20:23:39] No cvmfs_config command found, will try listing directly
[2026-05-04 20:23:39] CVMFS is ok
[2026-05-04 20:23:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 20:23:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 20:23:39] Further information can be found at the LHC@home message board.
[2026-05-04 20:23:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 20:23:39] Checking for apptainer binary...
[2026-05-04 20:23:39] which: no apptainer in ((null))
[2026-05-04 20:23:39] apptainer is not installed, using version from CVMFS
[2026-05-04 20:23:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 20:23:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/29/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-05-04 20:23:39] apptainer works
[2026-05-04 20:23:39] Set ATHENA_PROC_NUMBER=12
[2026-05-04 20:23:39] Set ATHENA_CORE_NUMBER=12
[2026-05-04 20:23:39] Starting ATLAS job with PandaID=7128648494
[2026-05-04 20:23:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/29 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 20:26:46] Job failed
[2026-05-04 20:26:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/29/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2026-05-04 20:26:46] ++ pwd
[2026-05-04 20:26:46] + export RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot60/slots/29/
[2026-05-04 20:26:46] + RUNTIME_CONFIG_DIR=/var/lib/boinc/var/slot60/slots/29/
[2026-05-04 20:26:46] + mv ATLAS.root_0 EVNT.50010707._000007.pool.root.1
[2026-05-04 20:26:46] mv: 'ATLAS.root_0' and 'EVNT.50010707._000007.pool.root.1' are the same file
[2026-05-04 20:26:46] + tar --strip-components=5 -xvf input.tar.gz
[2026-05-04 20:26:46] + umask 077
[2026-05-04 20:26:46] ++ date +%s
[2026-05-04 20:26:46] + ACCOUNTING_STARTTIME=1777919020
[2026-05-04 20:26:46] + echo 'Detecting resource accounting method available for the job.'
[2026-05-04 20:26:46] Detecting resource accounting method available for the job.
[2026-05-04 20:26:46] + JOB_ACCOUNTING=
[2026-05-04 20:26:46] + command -v arc-job-cgroup
[2026-05-04 20:26:46] + '[' -z '' ']'
[2026-05-04 20:26:46] + GNU_TIME=/usr/bin/time
[2026-05-04 20:26:46] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2026-05-04 20:26:46] Looking for /usr/bin/time tool for accounting measurements
[2026-05-04 20:26:46] + '[' '!' -z /usr/bin/time ']'
[2026-05-04 20:26:46] + /usr/bin/time --version
[2026-05-04 20:26:46] + echo 'GNU time found and will be used for job accounting.'
[2026-05-04 20:26:46] GNU time found and will be used for job accounting.
[2026-05-04 20:26:46] + JOB_ACCOUNTING=gnutime
[2026-05-04 20:26:46] + '[' -z gnutime ']'
[2026-05-04 20:26:46] + export PANDA_JSID=harvester-CERN_central_ACTA
[2026-05-04 20:26:46] + PANDA_JSID=harvester-CERN_central_ACTA
[2026-05-04 20:26:46] + export GTAG=http://aipanda403.cern.ch/data/jobs/2026-05-04/BOINC_MCORE/7128648494.out
[2026-05-04 20:26:46] + GTAG=http://aipanda403.cern.ch/data/jobs/2026-05-04/BOINC_MCORE/7128648494.out
[2026-05-04 20:26:46] + export PILOT_NOKILL=YES
[2026-05-04 20:26:46] + PILOT_NOKILL=YES
[2026-05-04 20:26:46] + export GRID_GLOBAL_JOBID=5fa755d15111
[2026-05-04 20:26:46] + GRID_GLOBAL_JOBID=5fa755d15111
[2026-05-04 20:26:46] + export GRID_GLOBAL_JOBURL=https://arc-boinc-02.cern.ch:443/arex/5fa755d15111
[2026-05-04 20:26:46] + GRID_GLOBAL_JOBURL=https://arc-boinc-02.cern.ch:443/arex/5fa755d15111
[2026-05-04 20:26:46] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-05-04 20:26:46] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2026-05-04 20:26:46] + export GRID_GLOBAL_JOBHOST=arc-boinc-02.cern.ch
[2026-05-04 20:26:46] + GRID_GLOBAL_JOBHOST=arc-boinc-02.cern.ch
[2026-05-04 20:26:46] ++ pwd
[2026-05-04 20:26:46] + RUNTIME_JOB_DIR=/var/lib/boinc/var/slot60/slots/29
[2026-05-04 20:26:46] + RUNTIME_JOB_STDIN=/dev/null
[2026-05-04 20:26:46] ++ pwd
[2026-05-04 20:26:46] + RUNTIME_JOB_STDOUT=/var/lib/boinc/var/slot60/slots/29/log.50010710._000124.job.log.1
[2026-05-04 20:26:46] ++ pwd
[2026-05-04 20:26:46] + RUNTIME_JOB_STDERR=/var/lib/boinc/var/slot60/slots/29/log.50010710._000124.job.log.1
[2026-05-04 20:26:46] ++ pwd
[2026-05-04 20:26:46] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot60/slots/29.diag
[2026-05-04 20:26:46] + '[' '!' -z '' ']'
[2026-05-04 20:26:46] + RUNTIME_LOCAL_SCRATCH_DIR=
[2026-05-04 20:26:46] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2026-05-04 20:26:46] + RUNTIME_FRONTEND_SEES_NODE=
[2026-05-04 20:26:46] + RUNTIME_NODE_SEES_FRONTEND=yes
[2026-05-04 20:26:46] + '[' '!' -z '' ']'
[2026-05-04 20:26:46] + '[' -z yes ']'
[2026-05-04 20:26:46] ++ pwd
[2026-05-04 20:26:46] + RUNTIME_JOB_DIAG=/var/lib/boinc/var/slot60/slots/29/5fa755d15111.diag
[2026-05-04 20:26:46] + runtimeenvironments=
[2026-05-04 20:26:46] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-05-04 20:26:46] + RTE_function_0 1
[2026-05-04 20:26:46] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-05-04 20:26:46] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-05-04 20:26:46] + export BOINC_APP=ATLAS
[2026-05-04 20:26:46] + BOINC_APP=ATLAS
[2026-05-04 20:26:46] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-05-04 20:26:46] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-05-04 20:26:46] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-05-04 20:26:46] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-05-04 20:26:46] + '[' -z 1 ']'
[2026-05-04 20:26:46] + '[' 1 == 1 ']'
[2026-05-04 20:26:46] + shift
[2026-05-04 20:26:46] + export SITE_NAME=BOINC
[2026-05-04 20:26:46] + SITE_NAME=BOINC
[2026-05-04 20:26:46] + export ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot60/slots/29/
[2026-05-04 20:26:46] + ATLAS_LOCAL_AREA=/var/lib/boinc/var/slot60/slots/29/
[2026-05-04 20:26:46] + '[' -e /var/lib/boinc/var/slot60/slots/29/init_data.xml ']'
[2026-05-04 20:26:46] + grep '<use_http_proxy/>' /var/lib/boinc/var/slot60/slots/29/init_data.xml
[2026-05-04 20:26:46] + '[' 0 -ne 0 ']'
[2026-05-04 20:26:46] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2026-05-04 20:26:46] + '[' -f /etc/os-release ']'
[2026-05-04 20:26:46] +++ cat /etc/os-release
[2026-05-04 20:26:46] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2026-05-04 20:26:46] +++ NAME='CentOS Linux'
[2026-05-04 20:26:46] +++ VERSION='7 (Core)'
[2026-05-04 20:26:46] +++ ID=centos
[2026-05-04 20:26:46] +++ ID_LIKE='rhel fedora'
[2026-05-04 20:26:46] +++ VERSION_ID=7
[2026-05-04 20:26:46] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2026-05-04 20:26:46] +++ ANSI_COLOR='0;31'
[2026-05-04 20:26:46] +++ CPE_NAME=cpe:/o:centos:centos:7
[2026-05-04 20:26:46] +++ HOME_URL=https://www.centos.org/
[2026-05-04 20:26:46] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2026-05-04 20:26:46] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2026-05-04 20:26:46] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2026-05-04 20:26:46] +++ REDHAT_SUPPORT_PRODUCT=centos
[2026-05-04 20:26:46] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2026-05-04 20:26:46] ++ echo 'CentOS Linux 7 (Core)'
[2026-05-04 20:26:46] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2026-05-04 20:26:46] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2026-05-04 20:26:46] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2026-05-04 20:26:46] + HOME=/var/lib/boinc/var/slot60/slots/29
[2026-05-04 20:26:46] + export HOME
[2026-05-04 20:26:46] + cd /var/lib/boinc/var/slot60/slots/29
[2026-05-04 20:26:46] + '[' '!' -z '' ']'
[2026-05-04 20:26:46] + '[' -z '' ']'
[2026-05-04 20:26:46] ++ /bin/hostname -f
[2026-05-04 20:26:46] + nodename=skurut18.grid.cesnet.cz
[2026-05-04 20:26:46] + echo nodename=skurut18.grid.cesnet.cz
[2026-05-04 20:26:46] + echo Processors=2
[2026-05-04 20:26:46] + echo Nodecount=1
[2026-05-04 20:26:46] + echo Benchmark=HEPSPEC:1.0
[2026-05-04 20:26:46] + executable=./runpilot2-wrapper.sh
[2026-05-04 20:26:46] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2026-05-04 20:26:46] ++ dd if=./runpilot2-wrapper.sh count=1
[2026-05-04 20:26:46] ++ head -n 1
[2026-05-04 20:26:46] ++ tr -d '\0'
[2026-05-04 20:26:46] + line1='#!/bin/bash'
[2026-05-04 20:26:46] ++ echo '#!/bin/bash'
[2026-05-04 20:26:46] ++ sed -n 's/^#! *//p'
[2026-05-04 20:26:46] + shebang=/bin/bash
[2026-05-04 20:26:46] ++ echo /bin/bash
[2026-05-04 20:26:46] ++ awk '{print $1}'
[2026-05-04 20:26:46] + interpreter=/bin/bash
[2026-05-04 20:26:46] + '[' /bin/bash = /usr/bin/env ']'
[2026-05-04 20:26:46] + '[' x/bin/bash = x ']'
[2026-05-04 20:26:46] + type /bin/bash
[2026-05-04 20:26:46] + '[' xgnutime = xgnutime ']'
[2026-05-04 20:26:46] + /usr/bin/time -o /var/lib/boinc/var/slot60/slots/29/5fa755d15111.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.13.0.23 -z -t --piloturl local --mute --container
[2026-05-04 20:26:46] + RESULT=2
[2026-05-04 20:26:46] + sed -i -e /nodename=/d /var/lib/boinc/var/slot60/slots/29/5fa755d15111.diag
[2026-05-04 20:26:46] ++ grep domain_name init_data.xml
[2026-05-04 20:26:46] ++ awk -F '>' '{print $2}'
[2026-05-04 20:26:46] ++ awk -F '<' '{print $1}'
[2026-05-04 20:26:46] ++ sed -e 's# #_#g'
[2026-05-04 20:26:46] + hostname=skurut18.grid.cesnet.cz
[2026-05-04 20:26:46] ++ grep user_name init_data.xml
[2026-05-04 20:26:46] ++ awk -F '>' '{print $2}'
[2026-05-04 20:26:46] ++ awk -F '<' '{print $1}'
[2026-05-04 20:26:46] ++ sed -e 's# #_#g'
[2026-05-04 20:26:46] + username=praguelcg2
[2026-05-04 20:26:46] + nodename=praguelcg2@skurut18.grid.cesnet.cz
[2026-05-04 20:26:46] + echo nodename=praguelcg2@skurut18.grid.cesnet.cz
[2026-05-04 20:26:46] + '[' -n 12 ']'
[2026-05-04 20:26:46] + sed -i -e s/Processors=1/Processors=12/ /var/lib/boinc/var/slot60/slots/29/5fa755d15111.diag
[2026-05-04 20:26:46] + echo exitcode=2
[2026-05-04 20:26:46] + runtimeenvironments=
[2026-05-04 20:26:46] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2026-05-04 20:26:46] + RTE_function_0 2
[2026-05-04 20:26:46] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-05-04 20:26:46] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2026-05-04 20:26:46] + export BOINC_APP=ATLAS
[2026-05-04 20:26:46] + BOINC_APP=ATLAS
[2026-05-04 20:26:46] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-05-04 20:26:46] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2026-05-04 20:26:46] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-05-04 20:26:46] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2026-05-04 20:26:46] + '[' -z 2 ']'
[2026-05-04 20:26:46] + '[' 2 == 1 ']'
[2026-05-04 20:26:46] + '[' 0 -ne 0 ']'
[2026-05-04 20:26:46] + echo 'zip all output files'
[2026-05-04 20:26:46] + flist='*.diag '
[2026-05-04 20:26:46] + for f in ./heartbeat.json ./output.list ./log.50010710._000124.job.log.1 ./log.50010710._000124.job.log.1 ./gmlog/
[2026-05-04 20:26:46] + '[' -e ./heartbeat.json ']'
[2026-05-04 20:26:46] + flist='*.diag  ./heartbeat.json'
[2026-05-04 20:26:46] + for f in ./heartbeat.json ./output.list ./log.50010710._000124.job.log.1 ./log.50010710._000124.job.log.1 ./gmlog/
[2026-05-04 20:26:46] + '[' -e ./output.list ']'
[2026-05-04 20:26:46] + for f in ./heartbeat.json ./output.list ./log.50010710._000124.job.log.1 ./log.50010710._000124.job.log.1 ./gmlog/
[2026-05-04 20:26:46] + '[' -e ./log.50010710._000124.job.log.1 ']'
[2026-05-04 20:26:46] + flist='*.diag  ./heartbeat.json ./log.50010710._000124.job.log.1'
[2026-05-04 20:26:46] + for f in ./heartbeat.json ./output.list ./log.50010710._000124.job.log.1 ./log.50010710._000124.job.log.1 ./gmlog/
[2026-05-04 20:26:46] + '[' -e ./log.50010710._000124.job.log.1 ']'
[2026-05-04 20:26:46] + flist='*.diag  ./heartbeat.json ./log.50010710._000124.job.log.1 ./log.50010710._000124.job.log.1'
[2026-05-04 20:26:46] + for f in ./heartbeat.json ./output.list ./log.50010710._000124.job.log.1 ./log.50010710._000124.job.log.1 ./gmlog/
[2026-05-04 20:26:46] + '[' -e ./gmlog/ ']'
[2026-05-04 20:26:46] + '[' -f output.list ']'
[2026-05-04 20:26:46] + tar cvf result.tar.gz 5fa755d15111.diag ./heartbeat.json ./log.50010710._000124.job.log.1 ./log.50010710._000124.job.log.1
[2026-05-04 20:26:46] + '[' xgnutime = xcgroup ']'
[2026-05-04 20:26:46] + '[' -n '' ']'
[2026-05-04 20:26:46] + '[' -n '' ']'
[2026-05-04 20:26:46] ++ date +%s
[2026-05-04 20:26:46] + ACCOUNTING_ENDTIME=1777919206
[2026-05-04 20:26:46] ++ date -d '1970-01-01 UTC 1777919020 seconds' +%Y%m%d%H%M%SZ
[2026-05-04 20:26:46] + echo LRMSStartTime=20260504202340Z
[2026-05-04 20:26:46] ++ date -d '1970-01-01 UTC 1777919206 seconds' +%Y%m%d%H%M%SZ
[2026-05-04 20:26:46] + echo LRMSEndTime=20260504202646Z
[2026-05-04 20:26:46] + echo walltime=186
[2026-05-04 20:26:46] + echo exitcode=2
[2026-05-04 20:26:46] + exit 2
[2026-05-04 20:26:46] ./pilotlog.txt
[2026-05-04 20:26:46] ./PanDA_Pilot-7128648494/pilotlog.txt
[2026-05-04 20:26:46] ./PanDA_Pilot-7128648494/PoolFileCatalog.xml
[2026-05-04 20:26:46] ./PanDA_Pilot-7128648494/log.EVNTtoHITS
[2026-05-04 20:26:46] ./PanDA_Pilot-7128648494/prmon.log
[2026-05-04 20:26:46] ./log.50010710._000124.job.log.1
[2026-05-04 20:26:46] ./runtime_log
[2026-05-04 20:26:46] ./pilot3/pilot/util/loggingsupport.py
[2026-05-04 20:26:46] ./pilot3/pilot/util/realtimelogger.py
[2026-05-04 20:26:46] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2026-05-04 20:26:46] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2026-05-04 20:26:46] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2026-05-04 20:26:46] ./pilot3/pilot/util/lokirealtimelogger.py
[2026-05-04 20:26:46] ./runtime_log.err
[2026-05-04 20:26:46] ./log.50010710._000124.job.log.tgz.1
21:22:29 (1184674): wrapper (7.7.26015): starting
21:22:29 (1184674): wrapper: running run_atlas (--nthreads 12)
[2026-05-04 21:22:29] Arguments: --nthreads 12
[2026-05-04 21:22:29] Threads: 12
[2026-05-04 21:22:29] This job has been restarted, cleaning up previous attempt
[2026-05-04 21:22:29] Checking for CVMFS
[2026-05-04 21:22:29] No cvmfs_config command found, will try listing directly
[2026-05-04 21:22:29] CVMFS is ok
[2026-05-04 21:22:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 21:22:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 21:22:29] Further information can be found at the LHC@home message board.
[2026-05-04 21:22:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 21:22:29] Checking for apptainer binary...
[2026-05-04 21:22:29] which: no apptainer in ((null))
[2026-05-04 21:22:29] apptainer is not installed, using version from CVMFS
[2026-05-04 21:22:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 21:22:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/29/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-05-04 21:22:30] apptainer works
[2026-05-04 21:22:30] Set ATHENA_PROC_NUMBER=12
[2026-05-04 21:22:30] Set ATHENA_CORE_NUMBER=12
[2026-05-04 21:22:30] Starting ATLAS job with PandaID=7128648494
[2026-05-04 21:22:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/29 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:20:23 (1593008): wrapper (7.7.26015): starting
22:20:23 (1593008): wrapper: running run_atlas (--nthreads 12)
[2026-05-04 22:20:23] Arguments: --nthreads 12
[2026-05-04 22:20:23] Threads: 12
[2026-05-04 22:20:23] This job has been restarted, cleaning up previous attempt
[2026-05-04 22:20:23] Checking for CVMFS
[2026-05-04 22:20:23] No cvmfs_config command found, will try listing directly
[2026-05-04 22:20:23] CVMFS is ok
[2026-05-04 22:20:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 22:20:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 22:20:23] Further information can be found at the LHC@home message board.
[2026-05-04 22:20:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 22:20:23] Checking for apptainer binary...
[2026-05-04 22:20:23] which: no apptainer in ((null))
[2026-05-04 22:20:23] apptainer is not installed, using version from CVMFS
[2026-05-04 22:20:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 22:20:23] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/29/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut18.grid.cesnet.cz
[2026-05-04 22:20:23] apptainer works
[2026-05-04 22:20:23] Set ATHENA_PROC_NUMBER=12
[2026-05-04 22:20:23] Set ATHENA_CORE_NUMBER=12
[2026-05-04 22:20:23] Starting ATLAS job with PandaID=7128648494
[2026-05-04 22:20:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/29 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 22:42:36]  *** The last 200 lines of the pilot log: ***
[2026-05-04 22:42:36]  guid=d6e09233-d501-4572-adfc-918841a8d166
[2026-05-04 22:42:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-04 22:42:36]  is_altstaged=None
[2026-05-04 22:42:36]  is_tar=False
[2026-05-04 22:42:36]  lfn=log.50010710._000124.job.log.tgz.1
[2026-05-04 22:42:36]  mtime=0
[2026-05-04 22:42:36]  protocol_id=None
[2026-05-04 22:42:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-04 22:42:36]  replicas=None
[2026-05-04 22:42:36]  scope=mc23_13p6TeV
[2026-05-04 22:42:36]  status=None
[2026-05-04 22:42:36]  status_code=0
[2026-05-04 22:42:36]  storage_token=
[2026-05-04 22:42:36]  surl=/var/lib/boinc/var/slot60/slots/29/PanDA_Pilot-7128648494/log.50010710._000124.job.log.tgz.1
[2026-05-04 22:42:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/a1/log.50010710._000124.job.log.tgz.1
[2026-05-04 22:42:36]  workdir=None
[2026-05-04 22:42:36] ]
[2026-05-04 22:42:36] 2026-05-04 20:41:46,758 | INFO     | transferring file log.50010710._000124.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/29/PanDA_Pilot-7128648494/log.50010710._000124.job.log.tgz.1 to /var/lib/
[2026-05-04 22:42:36] 2026-05-04 20:41:46,758 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/29/PanDA_Pilot-7128648494/log.50010710._000124.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/29/
[2026-05-04 22:42:36] 2026-05-04 20:41:46,772 | INFO     | adding to output.list: log.50010710._000124.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/a1/log.50010710._000124.job.log.tg
[2026-05-04 22:42:36] 2026-05-04 20:41:46,772 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-04 22:42:36] 2026-05-04 20:41:46,773 | INFO     | summary of transferred files:
[2026-05-04 22:42:36] 2026-05-04 20:41:46,773 | INFO     |  -- lfn=log.50010710._000124.job.log.tgz.1, status_code=0, status=transferred
[2026-05-04 22:42:36] 2026-05-04 20:41:46,773 | INFO     | stage-out finished correctly
[2026-05-04 22:42:36] 2026-05-04 20:41:48,103 | INFO     | monitor loop #101: job 0:7128648494 is in state 'finished'
[2026-05-04 22:42:36] 2026-05-04 20:41:48,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-04 22:42:36] 2026-05-04 20:41:49,846 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-04 22:42:36] 2026-05-04 20:41:50,129 | INFO     | PID=1597594 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 22:42:36] 2026-05-04 20:41:50,129 | INFO     | .. there are 9 such processes running
[2026-05-04 22:42:36] 2026-05-04 20:41:50,607 | INFO     | monitor loop #102: job 0:7128648494 is in state 'finished'
[2026-05-04 22:42:36] 2026-05-04 20:41:50,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-04 22:42:36] 2026-05-04 20:41:52,798 | INFO     | job 7128648494 has state=finished
[2026-05-04 22:42:36] 2026-05-04 20:41:52,798 | INFO     | preparing for final server update for job 7128648494 in state='finished'
[2026-05-04 22:42:36] 2026-05-04 20:41:52,798 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/29/PanDA_Pilot-7128648494/jobReport.json
[2026-05-04 22:42:36] 2026-05-04 20:41:52,800 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/29/workernode_map.json
[2026-05-04 22:42:36] 2026-05-04 20:41:52,800 | INFO     | this job has now completed (state=finished)
[2026-05-04 22:42:36] 2026-05-04 20:41:52,800 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 22:42:36] 2026-05-04 20:41:52,800 | INFO     | log transfer has been attempted: DONE
[2026-05-04 22:42:36] 2026-05-04 20:41:52,800 | INFO     | job 7128648494 has finished - writing final server update
[2026-05-04 22:42:36] 2026-05-04 20:41:52,801 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1540500/.job.ad'
[2026-05-04 22:42:36] 2026-05-04 20:41:52,801 | INFO     | total number of processed events: 400 (read)
[2026-05-04 22:42:36] 2026-05-04 20:41:52,817 | INFO     | using path: /var/lib/boinc/var/slot60/slots/29/PanDA_Pilot-7128648494/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 22:42:36] 2026-05-04 20:41:52,818 | INFO     | extracted standard info from prmon json
[2026-05-04 22:42:36] 2026-05-04 20:41:52,818 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 22:42:36] 2026-05-04 20:41:52,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 22:42:36] 2026-05-04 20:41:52,818 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 22:42:36] 2026-05-04 20:41:52,818 | INFO     | fitting pss+swap vs Time
[2026-05-04 22:42:36] 2026-05-04 20:41:52,818 | INFO     | sum of square deviations: 846527.5
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | sum of deviations: 15460877.0
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | mean x (centered): 0.0
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | mean y: 2756863.1428571427
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | intersect: 2756863.1428571427
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | chi2: 1.8115422437586842e-05
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | current memory leak: 18.26 B/s (using 14 data points, chi2=0.00)
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | could have reported an average CPU frequency of 3658 MHz (4 samples)
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | ..............................
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | . Timing measurements:
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | . get job = 0 s
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | . initial setup = 0 s
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | . payload setup = 5 s
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | . stage-in = 0 s
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | . payload execution = 1257 s
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | . stage-out = 0 s
[2026-05-04 22:42:36] 2026-05-04 20:41:52,819 | INFO     | . log creation = 0 s
[2026-05-04 22:42:36] 2026-05-04 20:41:52,820 | INFO     | ..............................
[2026-05-04 22:42:36] 2026-05-04 20:41:52,864 | INFO     | 
[2026-05-04 22:42:36] 2026-05-04 20:41:52,864 | INFO     | job summary report
[2026-05-04 22:42:36] 2026-05-04 20:41:52,864 | INFO     | --------------------------------------------------
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | PanDA job id: 7128648494
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | task id: 50010710
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | errors: (none)
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | pilot state: finished 
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | transexitcode: 0
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | exeerrorcode: 0
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | exeerrordiag: 
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | exitcode: 0
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | exitmsg: OK
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | cpuconsumptiontime: 13291 s
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | nevents: 400
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | neventsw: 0
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | pid: 1600768
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | pgrp: 1600768
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | corecount: 12
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | event service: False
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | sizes: {0: 2272161, 10: 2272161, 1266: 2296776, 1268: 2305798, 1271: 2305854, 1274: 2306048}
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | --------------------------------------------------
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | 
[2026-05-04 22:42:36] 2026-05-04 20:41:52,865 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/29
[2026-05-04 22:42:36] 2026-05-04 20:41:52,888 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | job 7128648494 has completed (purged errors)
[2026-05-04 22:42:36] 2026-05-04 20:41:52,889 | INFO     | overall cleanup function is called
[2026-05-04 22:42:36] 2026-05-04 20:41:53,897 | INFO     | --- collectZombieJob: --- 10, [1600768]
[2026-05-04 22:42:36] 2026-05-04 20:41:53,897 | INFO     | zombie collector waiting for pid 1600768
[2026-05-04 22:42:36] 2026-05-04 20:41:53,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 22:42:36] 2026-05-04 20:41:53,898 | INFO     | collected zombie processes
[2026-05-04 22:42:36] 2026-05-04 20:41:53,898 | INFO     | will attempt to kill all subprocesses of pid=1600768
[2026-05-04 22:42:36] 2026-05-04 20:41:54,201 | INFO     | process IDs to be killed: [1600768] (in reverse order)
[2026-05-04 22:42:36] 2026-05-04 20:41:54,349 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 22:42:36] 2026-05-04 20:41:54,349 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 22:42:36] 2026-05-04 20:41:54,379 | INFO     | did not find any defunct processes belonging to 1600768
[2026-05-04 22:42:36] 2026-05-04 20:41:54,403 | INFO     | did not find any defunct processes belonging to 1600768
[2026-05-04 22:42:36] 2026-05-04 20:41:54,404 | INFO     | Ready for new job
[2026-05-04 22:42:36] 2026-05-04 20:41:54,405 | INFO     | ***************************************
[2026-05-04 22:42:36] 2026-05-04 20:41:54,405 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 22:42:36] 2026-05-04 20:41:54,405 | INFO     | ***************************************
[2026-05-04 22:42:36] 2026-05-04 20:41:54,405 | INFO     | 
[2026-05-04 22:42:36] 2026-05-04 20:41:54,409 | INFO     | architecture information:
[2026-05-04 22:42:36] 2026-05-04 20:41:54,409 | INFO     | executing command: cat /etc/os-release
[2026-05-04 22:42:36] 2026-05-04 20:41:54,427 | INFO     | cat /etc/os-release:
[2026-05-04 22:42:36] NAME="CentOS Linux"
[2026-05-04 22:42:36] VERSION="7 (Core)"
[2026-05-04 22:42:36] ID="centos"
[2026-05-04 22:42:36] ID_LIKE="rhel fedora"
[2026-05-04 22:42:36] VERSION_ID="7"
[2026-05-04 22:42:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 22:42:36] ANSI_COLOR="0;31"
[2026-05-04 22:42:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 22:42:36] HOME_URL="https://www.centos.org/"
[2026-05-04 22:42:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 22:42:36] 
[2026-05-04 22:42:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 22:42:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 22:42:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 22:42:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 22:42:36] 
[2026-05-04 22:42:36] 2026-05-04 20:41:54,427 | INFO     | ***************************************
[2026-05-04 22:42:36] 2026-05-04 20:41:54,932 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/29
[2026-05-04 22:42:36] 2026-05-04 20:41:54,951 | INFO     | sufficient remaining disk space (312535416832 B)
[2026-05-04 22:42:36] 2026-05-04 20:41:54,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 22:42:36] 2026-05-04 20:41:54,951 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 22:42:36] 2026-05-04 20:41:54,951 | INFO     | update_server=False
[2026-05-04 22:42:36] 2026-05-04 20:41:54,951 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 22:42:36] 2026-05-04 20:41:54,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 22:42:36] 2026-05-04 20:41:54,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 22:42:36] 2026-05-04 20:41:54,952 | INFO     | aborting loop
[2026-05-04 22:42:36] 2026-05-04 20:41:55,357 | INFO     | all data control threads have been joined
[2026-05-04 22:42:36] 2026-05-04 20:41:55,804 | INFO     | all job control threads have been joined
[2026-05-04 22:42:36] 2026-05-04 20:41:55,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 22:42:36] 2026-05-04 20:41:55,956 | INFO     | [job] retrieve thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:55,958 | INFO     | [job] job monitor thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:56,186 | INFO     | all payload control threads have been joined
[2026-05-04 22:42:36] 2026-05-04 20:41:56,320 | INFO     | [job] validate thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:56,342 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:56,343 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:56,363 | INFO     | [data] control thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:56,521 | INFO     | [data] copytool_in thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:56,569 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:56,739 | INFO     | [payload] failed_post thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:56,810 | INFO     | [job] control thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:56,958 | INFO     | [data] copytool_out thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:57,192 | INFO     | [payload] control thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:57,344 | INFO     | [payload] validate_post thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:57,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 22:42:36] 2026-05-04 20:41:58,881 | INFO     | [job] queue monitor thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:41:59,903 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:42:05,413 | INFO     | job.realtimelogging is not enabled
[2026-05-04 22:42:36] 2026-05-04 20:42:06,419 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 22:42:36] 2026-05-04 20:42:24,685 | INFO     | PID=1597594 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 22:42:36] 2026-05-04 20:42:24,685 | INFO     | .. there are 9 such processes running
[2026-05-04 22:42:36] 2026-05-04 20:42:24,687 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 22:42:36] 2026-05-04 20:42:24,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 22:42:36] 2026-05-04 20:42:24,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 22:42:36] 2026-05-04 20:42:30,321 | INFO     | [monitor] cgroup control has ended
[2026-05-04 22:42:36] 2026-05-04 20:42:31,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22764267738944)>', '<ExcThread(monitor, started 22764030535424)>']
[2026-05-04 22:42:36] 2026-05-04 20:42:31,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 22:42:36] 2026-05-04 20:42:31,722 | INFO     | [monitor] control thread has ended
[2026-05-04 22:42:36] 2026-05-04 20:42:36,052 | INFO     | all workflow threads have been joined
[2026-05-04 22:42:36] 2026-05-04 20:42:36,052 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 22:42:36] 2026-05-04 20:42:36,052 | INFO     | traces error code: 0
[2026-05-04 22:42:36] 2026-05-04 20:42:36,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 22:42:36] 2026-05-04 20:42:36,183 [wrapper] ==== pilot stdout END ====
[2026-05-04 22:42:36] 2026-05-04 20:42:36,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 22:42:36] 2026-05-04 20:42:36,186 [wrapper] pilotpid: 1597594
[2026-05-04 22:42:36] 2026-05-04 20:42:36,187 [wrapper] Pilot exit status: 0
[2026-05-04 22:42:36] 2026-05-04 20:42:36,194 [wrapper] pandaids: 7128648494 7128648494 7128648494 7128648494
[2026-05-04 22:42:36] 2026-05-04 20:42:36,279 [wrapper] cleanup supervisor_pilot 1699202 1597595
[2026-05-04 22:42:36] 2026-05-04 20:42:36,281 [wrapper] Test setup, not cleaning
[2026-05-04 22:42:36] 2026-05-04 20:42:36,283 [wrapper] apfmon messages muted
[2026-05-04 22:42:36] 2026-05-04 20:42:36,285 [wrapper] ==== wrapper stdout END ====
[2026-05-04 22:42:36] 2026-05-04 20:42:36,287 [wrapper] ==== wrapper stderr END ====
[2026-05-04 22:42:36]  *** Error codes and diagnostics ***
[2026-05-04 22:42:36]     "exeErrorCode": 0,
[2026-05-04 22:42:36]     "pilotErrorCode": 0,
[2026-05-04 22:42:36]  *** Listing of results directory ***
[2026-05-04 22:42:36] total 648084
[2026-05-04 22:42:36] drwx------. 5 boinc boinc      4096 Apr 22 11:13 pilot3
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc    683926 May  4 10:27 pilot3.tar.gz
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc      5631 May  4 10:58 queuedata.json
[2026-05-04 22:42:36] -rwx------. 1 boinc boinc     36322 May  4 10:58 runpilot2-wrapper.sh
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc       100 May  4 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 22:42:36] -rwxr-xr-x. 1 boinc boinc      7986 May  4 18:39 run_atlas
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc       105 May  4 18:39 job.xml
[2026-05-04 22:42:36] -rw-r--r--. 3 boinc boinc 245679987 May  4 18:39 EVNT.50010707._000007.pool.root.1
[2026-05-04 22:42:36] -rw-r--r--. 3 boinc boinc 245679987 May  4 18:39 ATLAS.root_0
[2026-05-04 22:42:36] -rw-r--r--. 2 boinc boinc     15667 May  4 18:39 start_atlas.sh
[2026-05-04 22:42:36] -rw-r--r--. 2 boinc boinc    697390 May  4 18:39 input.tar.gz
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc         0 May  4 18:39 boinc_lockfile
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc         0 May  4 20:23 wrapper_sigint_754990
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc         0 May  4 20:26 wrapper_sigkill_754990
[2026-05-04 22:42:36] drwxrwx--x. 2 boinc boinc      4096 May  4 20:26 shared
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc      2516 May  4 22:20 pandaJob.out
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc   1002597 May  4 22:20 agis_schedconf.cvmfs.json
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc   1505918 May  4 22:20 agis_ddmendpoints.agis.ALL.json
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc       443 May  4 22:20 workernode_map.json
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc      6637 May  4 22:20 init_data.xml
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc       487 May  4 22:41 boinc_task_state.xml
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc 167088241 May  4 22:41 HITS.50010710._000124.pool.root.1
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc      1022 May  4 22:41 memory_monitor_summary.json
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc    344834 May  4 22:41 log.50010710._000124.job.log.tgz.1
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc      6359 May  4 22:41 heartbeat_new.json
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc      6250 May  4 22:41 heartbeat.json
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc      8192 May  4 22:42 boinc_mmap_file
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc        27 May  4 22:42 wrapper_checkpoint.txt
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc        97 May  4 22:42 pilot_heartbeat.json
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc      4905 May  4 22:42 pilotlog.txt
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc    169327 May  4 22:42 log.50010710._000124.job.log.1
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc       357 May  4 22:42 output.list
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc       410 May  4 22:42 runtime_log
[2026-05-04 22:42:36] -rw-r--r--. 2 boinc boinc    532480 May  4 22:42 result.tar.gz
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc      8923 May  4 22:42 runtime_log.err
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc      1506 May  4 22:42 5fa755d15111.diag
[2026-05-04 22:42:36] -rw-r--r--. 1 boinc boinc     40340 May  4 22:42 stderr.txt
[2026-05-04 22:42:36] HITS file was successfully produced:
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc 167088241 May  4 22:41 shared/HITS.pool.root.1
[2026-05-04 22:42:36]  *** Contents of shared directory: ***
[2026-05-04 22:42:36] total 404328
[2026-05-04 22:42:36] -rw-r--r--. 3 boinc boinc 245679987 May  4 18:39 ATLAS.root_0
[2026-05-04 22:42:36] -rw-r--r--. 2 boinc boinc     15667 May  4 18:39 start_atlas.sh
[2026-05-04 22:42:36] -rw-r--r--. 2 boinc boinc    697390 May  4 18:39 input.tar.gz
[2026-05-04 22:42:36] -rw-------. 1 boinc boinc 167088241 May  4 22:41 HITS.pool.root.1
[2026-05-04 22:42:36] -rw-r--r--. 2 boinc boinc    532480 May  4 22:42 result.tar.gz
22:42:38 (1593008): run_atlas exited; CPU time 13321.501675
22:42:38 (1593008): called boinc_finish(0)

</stderr_txt>
]]>


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