Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:53:54 (3812784): wrapper (7.7.26015): starting
02:53:54 (3812784): wrapper: running run_atlas (--nthreads 4)
[2026-05-05 02:53:54] Arguments: --nthreads 4
[2026-05-05 02:53:54] Threads: 4
[2026-05-05 02:53:54] Checking for CVMFS
[2026-05-05 02:53:54] No cvmfs_config command found, will try listing directly
[2026-05-05 02:53:54] CVMFS is ok
[2026-05-05 02:53:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-05 02:53:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-05 02:53:54] Further information can be found at the LHC@home message board.
[2026-05-05 02:53:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-05 02:53:54] Checking for apptainer binary...
[2026-05-05 02:53:54] which: no apptainer in ((null))
[2026-05-05 02:53:54] apptainer is not installed, using version from CVMFS
[2026-05-05 02:53:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-05 02:53:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-05-05 02:53:54] apptainer works
[2026-05-05 02:53:54] Set ATHENA_PROC_NUMBER=4
[2026-05-05 02:53:54] Set ATHENA_CORE_NUMBER=4
[2026-05-05 02:53:54] Starting ATLAS job with PandaID=7128529553
[2026-05-05 02:53:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 05:24:30]  *** The last 200 lines of the pilot log: ***
[2026-05-05 05:24:30] 2026-05-05 03:23:30,941 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2298900/.job.ad'
[2026-05-05 05:24:30] 2026-05-05 03:23:30,941 | INFO     | total number of processed events: 400 (read)
[2026-05-05 05:24:30] 2026-05-05 03:23:30,953 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/PanDA_Pilot-7128529553/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 05:24:30] 2026-05-05 03:23:30,954 | INFO     | extracted standard info from prmon json
[2026-05-05 05:24:30] 2026-05-05 03:23:30,954 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 05:24:30] 2026-05-05 03:23:30,954 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 05:24:30] 2026-05-05 03:23:30,954 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 05:24:30] 2026-05-05 03:23:30,957 | INFO     | fitting pss+swap vs Time
[2026-05-05 05:24:30] 2026-05-05 03:23:30,957 | INFO     | sum of square deviations: 984941258.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,958 | INFO     | sum of deviations: 9996815054.000004
[2026-05-05 05:24:30] 2026-05-05 03:23:30,958 | INFO     | mean x (centered): 0.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,958 | INFO     | mean y: 2297875.0272108843
[2026-05-05 05:24:30] 2026-05-05 03:23:30,959 | INFO     | intersect: 2297875.0272108843
[2026-05-05 05:24:30] 2026-05-05 03:23:30,959 | INFO     | chi2: 2.2555302910403867
[2026-05-05 05:24:30] 2026-05-05 03:23:30,959 | INFO     | sum of square deviations: 887813855.5
[2026-05-05 05:24:30] 2026-05-05 03:23:30,960 | INFO     | sum of deviations: 18938013304.500004
[2026-05-05 05:24:30] 2026-05-05 03:23:30,960 | INFO     | mean x (centered): 0.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,960 | INFO     | mean y: 2311498.823943662
[2026-05-05 05:24:30] 2026-05-05 03:23:30,960 | INFO     | intersect: 2311498.823943662
[2026-05-05 05:24:30] 2026-05-05 03:23:30,960 | INFO     | chi2: 1.3944357860727847
[2026-05-05 05:24:30] 2026-05-05 03:23:30,961 | INFO     | current chi2=1.3944357860727847 (change=38.17703129007472 %)
[2026-05-05 05:24:30] 2026-05-05 03:23:30,961 | INFO     | sum of square deviations: 797291228.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,962 | INFO     | sum of deviations: 18129105511.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,962 | INFO     | mean x (centered): 0.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,962 | INFO     | mean y: 2310133.861313869
[2026-05-05 05:24:30] 2026-05-05 03:23:30,962 | INFO     | intersect: 2310133.861313869
[2026-05-05 05:24:30] 2026-05-05 03:23:30,962 | INFO     | chi2: 1.3959756851640859
[2026-05-05 05:24:30] 2026-05-05 03:23:30,962 | INFO     | current chi2=1.3959756851640859 (change=-0.1104316962230319 %)
[2026-05-05 05:24:30] 2026-05-05 03:23:30,962 | INFO     | right removable region: 136
[2026-05-05 05:24:30] 2026-05-05 03:23:30,963 | INFO     | sum of square deviations: 887813855.5
[2026-05-05 05:24:30] 2026-05-05 03:23:30,963 | INFO     | sum of deviations: -9822927478.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,963 | INFO     | mean x (centered): 0.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,964 | INFO     | mean y: 2328496.1549295774
[2026-05-05 05:24:30] 2026-05-05 03:23:30,964 | INFO     | intersect: 2328496.1549295774
[2026-05-05 05:24:30] 2026-05-05 03:23:30,964 | INFO     | chi2: 0.8970692218086369
[2026-05-05 05:24:30] 2026-05-05 03:23:30,964 | INFO     | current chi2=0.8970692218086369 (change=60.22801265972561 %)
[2026-05-05 05:24:30] 2026-05-05 03:23:30,964 | INFO     | sum of square deviations: 797291228.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,965 | INFO     | sum of deviations: -8927176272.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,965 | INFO     | mean x (centered): 0.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,965 | INFO     | mean y: 2326976.00729927
[2026-05-05 05:24:30] 2026-05-05 03:23:30,965 | INFO     | intersect: 2326976.00729927
[2026-05-05 05:24:30] 2026-05-05 03:23:30,965 | INFO     | chi2: 0.8971156384210275
[2026-05-05 05:24:30] 2026-05-05 03:23:30,966 | INFO     | current chi2=0.8971156384210275 (change=-0.005174250911985683 %)
[2026-05-05 05:24:30] 2026-05-05 03:23:30,966 | INFO     | left removable region: 10
[2026-05-05 05:24:30] 2026-05-05 03:23:30,966 | INFO     | sum of square deviations: 620244187.5
[2026-05-05 05:24:30] 2026-05-05 03:23:30,967 | INFO     | sum of deviations: -121777990.49999982
[2026-05-05 05:24:30] 2026-05-05 03:23:30,967 | INFO     | mean x (centered): 0.0
[2026-05-05 05:24:30] 2026-05-05 03:23:30,967 | INFO     | mean y: 2342428.738095238
[2026-05-05 05:24:30] 2026-05-05 03:23:30,967 | INFO     | intersect: 2342428.738095238
[2026-05-05 05:24:30] 2026-05-05 03:23:30,967 | INFO     | chi2: 0.004192050200441909
[2026-05-05 05:24:30] 2026-05-05 03:23:30,967 | INFO     | current memory leak: -0.20 B/s (using 126 data points, chi2=0.00)
[2026-05-05 05:24:30] 2026-05-05 03:23:30,968 | INFO     | could have reported an average CPU frequency of 2705 MHz (8 samples)
[2026-05-05 05:24:30] 2026-05-05 03:23:30,968 | INFO     | ..............................
[2026-05-05 05:24:30] 2026-05-05 03:23:30,968 | INFO     | . Timing measurements:
[2026-05-05 05:24:30] 2026-05-05 03:23:30,968 | INFO     | . get job = 0 s
[2026-05-05 05:24:30] 2026-05-05 03:23:30,968 | INFO     | . initial setup = 5 s
[2026-05-05 05:24:30] 2026-05-05 03:23:30,968 | INFO     | . payload setup = 9 s
[2026-05-05 05:24:30] 2026-05-05 03:23:30,968 | INFO     | . stage-in = 0 s
[2026-05-05 05:24:30] 2026-05-05 03:23:30,968 | INFO     | . payload execution = 8931 s
[2026-05-05 05:24:30] 2026-05-05 03:23:30,968 | INFO     | . stage-out = 0 s
[2026-05-05 05:24:30] 2026-05-05 03:23:30,968 | INFO     | . log creation = 0 s
[2026-05-05 05:24:30] 2026-05-05 03:23:30,969 | INFO     | ..............................
[2026-05-05 05:24:30] 2026-05-05 03:23:31,103 | INFO     | 
[2026-05-05 05:24:30] 2026-05-05 03:23:31,104 | INFO     | job summary report
[2026-05-05 05:24:30] 2026-05-05 03:23:31,104 | INFO     | --------------------------------------------------
[2026-05-05 05:24:30] 2026-05-05 03:23:31,104 | INFO     | PanDA job id: 7128529553
[2026-05-05 05:24:30] 2026-05-05 03:23:31,104 | INFO     | task id: 50010691
[2026-05-05 05:24:30] 2026-05-05 03:23:31,104 | INFO     | errors: (none)
[2026-05-05 05:24:30] 2026-05-05 03:23:31,104 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 05:24:30] 2026-05-05 03:23:31,104 | INFO     | pilot state: finished 
[2026-05-05 05:24:30] 2026-05-05 03:23:31,104 | INFO     | transexitcode: 0
[2026-05-05 05:24:30] 2026-05-05 03:23:31,104 | INFO     | exeerrorcode: 0
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | exeerrordiag: 
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | exitcode: 0
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | exitmsg: OK
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | cpuconsumptiontime: 34349 s
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | nevents: 400
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | neventsw: 0
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | pid: 3821964
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | pgrp: 3821964
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | corecount: 4
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | event service: False
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | sizes: {0: 2270399, 1: 2272228, 12: 2272228, 8944: 2300378, 8945: 2309398, 8947: 2309454, 8948: 2309776}
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | --------------------------------------------------
[2026-05-05 05:24:30] 2026-05-05 03:23:31,105 | INFO     | 
[2026-05-05 05:24:30] 2026-05-05 03:23:31,106 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-05-05 05:24:30] 2026-05-05 03:23:31,126 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,126 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,126 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,127 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,128 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 05:24:30] 2026-05-05 03:23:31,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,128 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 05:24:30] 2026-05-05 03:23:31,128 | INFO     | job 7128529553 has completed (purged errors)
[2026-05-05 05:24:30] 2026-05-05 03:23:31,128 | INFO     | overall cleanup function is called
[2026-05-05 05:24:30] 2026-05-05 03:23:32,136 | INFO     | --- collectZombieJob: --- 10, [3821964]
[2026-05-05 05:24:30] 2026-05-05 03:23:32,136 | INFO     | zombie collector waiting for pid 3821964
[2026-05-05 05:24:30] 2026-05-05 03:23:32,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 05:24:30] 2026-05-05 03:23:32,136 | INFO     | collected zombie processes
[2026-05-05 05:24:30] 2026-05-05 03:23:32,137 | INFO     | will attempt to kill all subprocesses of pid=3821964
[2026-05-05 05:24:30] 2026-05-05 03:23:32,307 | INFO     | process IDs to be killed: [3821964] (in reverse order)
[2026-05-05 05:24:30] 2026-05-05 03:23:32,390 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 05:24:30] 2026-05-05 03:23:32,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 05:24:30] 2026-05-05 03:23:32,402 | INFO     | did not find any defunct processes belonging to 3821964
[2026-05-05 05:24:30] 2026-05-05 03:23:32,412 | INFO     | did not find any defunct processes belonging to 3821964
[2026-05-05 05:24:30] 2026-05-05 03:23:32,412 | INFO     | Ready for new job
[2026-05-05 05:24:30] 2026-05-05 03:23:32,414 | INFO     | ***************************************
[2026-05-05 05:24:30] 2026-05-05 03:23:32,414 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 05:24:30] 2026-05-05 03:23:32,415 | INFO     | ***************************************
[2026-05-05 05:24:30] 2026-05-05 03:23:32,415 | INFO     | 
[2026-05-05 05:24:30] 2026-05-05 03:23:32,418 | INFO     | architecture information:
[2026-05-05 05:24:30] 2026-05-05 03:23:32,419 | INFO     | executing command: cat /etc/os-release
[2026-05-05 05:24:30] 2026-05-05 03:23:32,435 | INFO     | cat /etc/os-release:
[2026-05-05 05:24:30] NAME="CentOS Linux"
[2026-05-05 05:24:30] VERSION="7 (Core)"
[2026-05-05 05:24:30] ID="centos"
[2026-05-05 05:24:30] ID_LIKE="rhel fedora"
[2026-05-05 05:24:30] VERSION_ID="7"
[2026-05-05 05:24:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 05:24:30] ANSI_COLOR="0;31"
[2026-05-05 05:24:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 05:24:30] HOME_URL="https://www.centos.org/"
[2026-05-05 05:24:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 05:24:30] 
[2026-05-05 05:24:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 05:24:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 05:24:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 05:24:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 05:24:30] 
[2026-05-05 05:24:30] 2026-05-05 03:23:32,436 | INFO     | ***************************************
[2026-05-05 05:24:30] 2026-05-05 03:23:32,939 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-05-05 05:24:30] 2026-05-05 03:23:32,955 | INFO     | sufficient remaining disk space (33574354944 B)
[2026-05-05 05:24:30] 2026-05-05 03:23:32,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 05:24:30] 2026-05-05 03:23:32,956 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 05:24:30] 2026-05-05 03:23:32,956 | INFO     | update_server=False
[2026-05-05 05:24:30] 2026-05-05 03:23:32,956 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 05:24:30] 2026-05-05 03:23:32,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 05:24:30] 2026-05-05 03:23:33,379 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-05 05:24:30] 2026-05-05 03:23:33,380 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-05 05:24:30] 2026-05-05 03:23:33,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 05:24:30] 2026-05-05 03:23:33,380 | INFO     | will abort loop
[2026-05-05 05:24:30] 2026-05-05 03:23:33,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 05:24:30] 2026-05-05 03:23:33,823 | INFO     | all data control threads have been joined
[2026-05-05 05:24:30] 2026-05-05 03:23:33,962 | INFO     | [job] retrieve thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:33,962 | INFO     | [job] queue monitor thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:34,010 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:34,125 | INFO     | all payload control threads have been joined
[2026-05-05 05:24:30] 2026-05-05 03:23:34,195 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:34,237 | INFO     | [data] copytool_in thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:34,343 | INFO     | all job control threads have been joined
[2026-05-05 05:24:30] 2026-05-05 03:23:34,385 | INFO     | [job] job monitor thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:34,687 | INFO     | [payload] validate_post thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:34,828 | INFO     | [data] control thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:35,018 | INFO     | [payload] failed_post thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:35,130 | INFO     | [payload] control thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:35,145 | INFO     | [job] validate thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:35,206 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:35,345 | INFO     | [job] control thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:35,635 | INFO     | [data] copytool_out thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:36,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 05:24:30] 2026-05-05 03:23:40,271 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:23:43,438 | INFO     | job.realtimelogging is not enabled
[2026-05-05 05:24:30] 2026-05-05 03:23:44,442 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 05:24:30] 2026-05-05 03:24:02,800 | INFO     | PID=3816997 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-05 05:24:30] 2026-05-05 03:24:02,801 | INFO     | .. there are 8 such processes running
[2026-05-05 05:24:30] 2026-05-05 03:24:02,803 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 05:24:30] 2026-05-05 03:24:02,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 05:24:30] 2026-05-05 03:24:02,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 05:24:30] 2026-05-05 03:24:04,451 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-05-05 05:24:30] 2026-05-05 03:24:24,781 | INFO     | [monitor] cgroup control has ended
[2026-05-05 05:24:30] 2026-05-05 03:24:24,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22747831482176)>', '<ExcThread(monitor, started 22747595159296)>']
[2026-05-05 05:24:30] 2026-05-05 03:24:25,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 05:24:30] 2026-05-05 03:24:25,919 | INFO     | [monitor] control thread has ended
[2026-05-05 05:24:30] 2026-05-05 03:24:29,966 | INFO     | all workflow threads have been joined
[2026-05-05 05:24:30] 2026-05-05 03:24:29,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 05:24:30] 2026-05-05 03:24:29,967 | INFO     | traces error code: 0
[2026-05-05 05:24:30] 2026-05-05 03:24:29,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 05:24:30] 2026-05-05 03:24:30,118 [wrapper] ==== pilot stdout END ====
[2026-05-05 05:24:30] 2026-05-05 03:24:30,121 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 05:24:30] 2026-05-05 03:24:30,123 [wrapper] pilotpid: 3816997
[2026-05-05 05:24:30] 2026-05-05 03:24:30,125 [wrapper] Pilot exit status: 0
[2026-05-05 05:24:30] 2026-05-05 03:24:30,135 [wrapper] pandaids: 7128529553
[2026-05-05 05:24:30] 2026-05-05 03:24:30,209 [wrapper] cleanup supervisor_pilot 4028936 3816998
[2026-05-05 05:24:30] 2026-05-05 03:24:30,212 [wrapper] Test setup, not cleaning
[2026-05-05 05:24:30] 2026-05-05 03:24:30,215 [wrapper] apfmon messages muted
[2026-05-05 05:24:30] 2026-05-05 03:24:30,218 [wrapper] ==== wrapper stdout END ====
[2026-05-05 05:24:30] 2026-05-05 03:24:30,220 [wrapper] ==== wrapper stderr END ====
[2026-05-05 05:24:30]  *** Error codes and diagnostics ***
[2026-05-05 05:24:30]     "exeErrorCode": 0,
[2026-05-05 05:24:30]     "pilotErrorCode": 0,
[2026-05-05 05:24:30]  *** Listing of results directory ***
[2026-05-05 05:24:30] total 410476
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc    683926 May  4 08:55 pilot3.tar.gz
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc      5631 May  4 09:00 queuedata.json
[2026-05-05 05:24:30] -rwx------. 1 boinc boinc     36322 May  4 09:02 runpilot2-wrapper.sh
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc       100 May  5 02:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 05:24:30] -rwxr-xr-x. 1 boinc boinc      7986 May  5 02:53 run_atlas
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc       105 May  5 02:53 job.xml
[2026-05-05 05:24:30] -rw-r--r--. 2 boinc boinc 244751395 May  5 02:53 EVNT.50010689._000031.pool.root.1
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc      6483 May  5 02:53 init_data.xml
[2026-05-05 05:24:30] -rw-r--r--. 2 boinc boinc    697407 May  5 02:53 input.tar.gz
[2026-05-05 05:24:30] -rw-r--r--. 2 boinc boinc     15667 May  5 02:53 start_atlas.sh
[2026-05-05 05:24:30] drwxrwx--x. 2 boinc boinc      4096 May  5 02:53 shared
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc         0 May  5 02:53 boinc_lockfile
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc      2555 May  5 02:53 pandaJob.out
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc   1002597 May  5 02:54 agis_schedconf.cvmfs.json
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc   1505918 May  5 02:54 agis_ddmendpoints.agis.ALL.json
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc       448 May  5 02:54 workernode_map.json
[2026-05-05 05:24:30] drwx------. 5 boinc boinc      4096 May  5 02:54 pilot3
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc 169161381 May  5 05:22 HITS.50010691._000756.pool.root.1
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc       487 May  5 05:23 boinc_task_state.xml
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc      1036 May  5 05:23 memory_monitor_summary.json
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc    278566 May  5 05:23 log.50010691._000756.job.log.tgz.1
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc      6410 May  5 05:23 heartbeat_new.json
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc      6301 May  5 05:23 heartbeat.json
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc        95 May  5 05:24 pilot_heartbeat.json
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc      8192 May  5 05:24 boinc_mmap_file
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc        27 May  5 05:24 wrapper_checkpoint.txt
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc      5089 May  5 05:24 pilotlog.txt
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc    859934 May  5 05:24 log.50010691._000756.job.log.1
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc       357 May  5 05:24 output.list
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc       410 May  5 05:24 runtime_log
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc   1157120 May  5 05:24 result.tar.gz
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc      8827 May  5 05:24 runtime_log.err
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc       662 May  5 05:24 448c29842c89.diag
[2026-05-05 05:24:30] -rw-r--r--. 1 boinc boinc     20790 May  5 05:24 stderr.txt
[2026-05-05 05:24:30] HITS file was successfully produced:
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc 169161381 May  5 05:22 shared/HITS.pool.root.1
[2026-05-05 05:24:30]  *** Contents of shared directory: ***
[2026-05-05 05:24:30] total 406056
[2026-05-05 05:24:30] -rw-r--r--. 2 boinc boinc 244751395 May  5 02:53 ATLAS.root_0
[2026-05-05 05:24:30] -rw-r--r--. 2 boinc boinc    697407 May  5 02:53 input.tar.gz
[2026-05-05 05:24:30] -rw-r--r--. 2 boinc boinc     15667 May  5 02:53 start_atlas.sh
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc 169161381 May  5 05:22 HITS.pool.root.1
[2026-05-05 05:24:30] -rw-------. 1 boinc boinc   1157120 May  5 05:24 result.tar.gz
05:24:31 (3812784): run_atlas exited; CPU time 34644.574370
05:24:31 (3812784): called boinc_finish(0)

</stderr_txt>
]]>

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