Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:43:59 (429801): wrapper (7.7.26015): starting
04:43:59 (429801): wrapper: running run_atlas (--nthreads 4)
[2026-05-05 04:43:59] Arguments: --nthreads 4
[2026-05-05 04:43:59] Threads: 4
[2026-05-05 04:43:59] Checking for CVMFS
[2026-05-05 04:43:59] No cvmfs_config command found, will try listing directly
[2026-05-05 04:43:59] CVMFS is ok
[2026-05-05 04:43:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-05 04:43:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-05 04:43:59] Further information can be found at the LHC@home message board.
[2026-05-05 04:43:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-05 04:43:59] Checking for apptainer binary...
[2026-05-05 04:43:59] which: no apptainer in ((null))
[2026-05-05 04:43:59] apptainer is not installed, using version from CVMFS
[2026-05-05 04:43:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-05 04:44:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-05-05 04:44:00] apptainer works
[2026-05-05 04:44:00] Set ATHENA_PROC_NUMBER=4
[2026-05-05 04:44:00] Set ATHENA_CORE_NUMBER=4
[2026-05-05 04:44:00] Starting ATLAS job with PandaID=7128381861
[2026-05-05 04:44:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 06:59:45]  *** The last 200 lines of the pilot log: ***
[2026-05-05 06:59:45] 2026-05-05 04:59:12,414 | INFO     | job 7128381861 has finished - writing final server update
[2026-05-05 06:59:45] 2026-05-05 04:59:12,415 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1339057/.job.ad'
[2026-05-05 06:59:45] 2026-05-05 04:59:12,415 | INFO     | total number of processed events: 400 (read)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,427 | INFO     | using path: /var/lib/boinc/var/slot28/slots/2/PanDA_Pilot-7128381861/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,428 | INFO     | extracted standard info from prmon json
[2026-05-05 06:59:45] 2026-05-05 04:59:12,428 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 06:59:45] 2026-05-05 04:59:12,428 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 06:59:45] 2026-05-05 04:59:12,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 06:59:45] 2026-05-05 04:59:12,431 | INFO     | fitting pss+swap vs Time
[2026-05-05 06:59:45] 2026-05-05 04:59:12,431 | INFO     | sum of square deviations: 729472282.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,432 | INFO     | sum of deviations: 2486051706.000002
[2026-05-05 06:59:45] 2026-05-05 04:59:12,432 | INFO     | mean x (centered): 0.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,433 | INFO     | mean y: 2320940.2932330826
[2026-05-05 06:59:45] 2026-05-05 04:59:12,433 | INFO     | intersect: 2320940.2932330826
[2026-05-05 06:59:45] 2026-05-05 04:59:12,433 | INFO     | chi2: 2.184335372048608
[2026-05-05 06:59:45] 2026-05-05 04:59:12,433 | INFO     | sum of square deviations: 650252192.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,434 | INFO     | sum of deviations: 10580144542.5
[2026-05-05 06:59:45] 2026-05-05 04:59:12,434 | INFO     | mean x (centered): 0.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,434 | INFO     | mean y: 2336035.5703125
[2026-05-05 06:59:45] 2026-05-05 04:59:12,434 | INFO     | intersect: 2336035.5703125
[2026-05-05 06:59:45] 2026-05-05 04:59:12,434 | INFO     | chi2: 1.403347869012233
[2026-05-05 06:59:45] 2026-05-05 04:59:12,435 | INFO     | current chi2=1.403347869012233 (change=35.75401071786497 %)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,435 | INFO     | sum of square deviations: 576985702.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,435 | INFO     | sum of deviations: 10209244077.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,436 | INFO     | mean x (centered): 0.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,436 | INFO     | mean y: 2335262.5528455283
[2026-05-05 06:59:45] 2026-05-05 04:59:12,436 | INFO     | intersect: 2335262.5528455283
[2026-05-05 06:59:45] 2026-05-05 04:59:12,436 | INFO     | chi2: 1.4054591779797947
[2026-05-05 06:59:45] 2026-05-05 04:59:12,436 | INFO     | current chi2=1.4054591779797947 (change=-0.150448011799655 %)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,436 | INFO     | right removable region: 122
[2026-05-05 06:59:45] 2026-05-05 04:59:12,437 | INFO     | sum of square deviations: 650252192.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,437 | INFO     | sum of deviations: -14856612494.5
[2026-05-05 06:59:45] 2026-05-05 04:59:12,437 | INFO     | mean x (centered): 0.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,437 | INFO     | mean y: 2353699.4921875
[2026-05-05 06:59:45] 2026-05-05 04:59:12,438 | INFO     | intersect: 2353699.4921875
[2026-05-05 06:59:45] 2026-05-05 04:59:12,438 | INFO     | chi2: 0.83781802873817
[2026-05-05 06:59:45] 2026-05-05 04:59:12,438 | INFO     | current chi2=0.83781802873817 (change=61.64425850264873 %)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,438 | INFO     | sum of square deviations: 576985702.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,439 | INFO     | sum of deviations: -14130425337.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,439 | INFO     | mean x (centered): 0.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,439 | INFO     | mean y: 2352141.5447154474
[2026-05-05 06:59:45] 2026-05-05 04:59:12,439 | INFO     | intersect: 2352141.5447154474
[2026-05-05 06:59:45] 2026-05-05 04:59:12,439 | INFO     | chi2: 0.8352866045545464
[2026-05-05 06:59:45] 2026-05-05 04:59:12,440 | INFO     | current chi2=0.8352866045545464 (change=0.3021448687892495 %)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,440 | INFO     | left removable region: 10
[2026-05-05 06:59:45] 2026-05-05 04:59:12,440 | INFO     | sum of square deviations: 435610028.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,440 | INFO     | sum of deviations: -5725103363.500001
[2026-05-05 06:59:45] 2026-05-05 04:59:12,441 | INFO     | mean x (centered): 0.0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,441 | INFO     | mean y: 2370619.151785714
[2026-05-05 06:59:45] 2026-05-05 04:59:12,441 | INFO     | intersect: 2370619.151785714
[2026-05-05 06:59:45] 2026-05-05 04:59:12,441 | INFO     | chi2: 0.02049046859768358
[2026-05-05 06:59:45] 2026-05-05 04:59:12,441 | INFO     | current memory leak: -13.14 B/s (using 112 data points, chi2=0.02)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,442 | INFO     | could have reported an average CPU frequency of 2661 MHz (8 samples)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,442 | INFO     | ..............................
[2026-05-05 06:59:45] 2026-05-05 04:59:12,442 | INFO     | . Timing measurements:
[2026-05-05 06:59:45] 2026-05-05 04:59:12,442 | INFO     | . get job = 0 s
[2026-05-05 06:59:45] 2026-05-05 04:59:12,442 | INFO     | . initial setup = 5 s
[2026-05-05 06:59:45] 2026-05-05 04:59:12,442 | INFO     | . payload setup = 10 s
[2026-05-05 06:59:45] 2026-05-05 04:59:12,442 | INFO     | . stage-in = 0 s
[2026-05-05 06:59:45] 2026-05-05 04:59:12,442 | INFO     | . payload execution = 8064 s
[2026-05-05 06:59:45] 2026-05-05 04:59:12,442 | INFO     | . stage-out = 0 s
[2026-05-05 06:59:45] 2026-05-05 04:59:12,442 | INFO     | . log creation = 0 s
[2026-05-05 06:59:45] 2026-05-05 04:59:12,443 | INFO     | ..............................
[2026-05-05 06:59:45] 2026-05-05 04:59:12,723 | INFO     | 
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | job summary report
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | --------------------------------------------------
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | PanDA job id: 7128381861
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | task id: 50011124
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | errors: (none)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | pilot state: finished 
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | transexitcode: 0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | exeerrorcode: 0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | exeerrordiag: 
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | exitcode: 0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | exitmsg: OK
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | cpuconsumptiontime: 30761 s
[2026-05-05 06:59:45] 2026-05-05 04:59:12,725 | INFO     | nevents: 400
[2026-05-05 06:59:45] 2026-05-05 04:59:12,726 | INFO     | neventsw: 0
[2026-05-05 06:59:45] 2026-05-05 04:59:12,726 | INFO     | pid: 438560
[2026-05-05 06:59:45] 2026-05-05 04:59:12,726 | INFO     | pgrp: 438560
[2026-05-05 06:59:45] 2026-05-05 04:59:12,726 | INFO     | corecount: 4
[2026-05-05 06:59:45] 2026-05-05 04:59:12,726 | INFO     | event service: False
[2026-05-05 06:59:45] 2026-05-05 04:59:12,726 | INFO     | sizes: {0: 2270596, 1: 2272254, 11: 2272254, 8078: 2299947, 8079: 2299946, 8080: 2309022, 8083: 2309206, 8085: 2309400}
[2026-05-05 06:59:45] 2026-05-05 04:59:12,726 | INFO     | --------------------------------------------------
[2026-05-05 06:59:45] 2026-05-05 04:59:12,726 | INFO     | 
[2026-05-05 06:59:45] 2026-05-05 04:59:12,726 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/2
[2026-05-05 06:59:45] 2026-05-05 04:59:12,748 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,749 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,749 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,749 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,749 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,749 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,750 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,750 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 06:59:45] 2026-05-05 04:59:12,751 | INFO     | job 7128381861 has completed (purged errors)
[2026-05-05 06:59:45] 2026-05-05 04:59:12,751 | INFO     | overall cleanup function is called
[2026-05-05 06:59:45] 2026-05-05 04:59:13,758 | INFO     | --- collectZombieJob: --- 10, [438560]
[2026-05-05 06:59:45] 2026-05-05 04:59:13,759 | INFO     | zombie collector waiting for pid 438560
[2026-05-05 06:59:45] 2026-05-05 04:59:13,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 06:59:45] 2026-05-05 04:59:13,759 | INFO     | collected zombie processes
[2026-05-05 06:59:45] 2026-05-05 04:59:13,759 | INFO     | will attempt to kill all subprocesses of pid=438560
[2026-05-05 06:59:45] 2026-05-05 04:59:14,033 | INFO     | process IDs to be killed: [438560] (in reverse order)
[2026-05-05 06:59:45] 2026-05-05 04:59:14,148 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 06:59:45] 2026-05-05 04:59:14,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 06:59:45] 2026-05-05 04:59:14,160 | INFO     | did not find any defunct processes belonging to 438560
[2026-05-05 06:59:45] 2026-05-05 04:59:14,171 | INFO     | did not find any defunct processes belonging to 438560
[2026-05-05 06:59:45] 2026-05-05 04:59:14,171 | INFO     | Ready for new job
[2026-05-05 06:59:45] 2026-05-05 04:59:14,173 | INFO     | ***************************************
[2026-05-05 06:59:45] 2026-05-05 04:59:14,173 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 06:59:45] 2026-05-05 04:59:14,173 | INFO     | ***************************************
[2026-05-05 06:59:45] 2026-05-05 04:59:14,173 | INFO     | 
[2026-05-05 06:59:45] 2026-05-05 04:59:14,177 | INFO     | architecture information:
[2026-05-05 06:59:45] 2026-05-05 04:59:14,177 | INFO     | executing command: cat /etc/os-release
[2026-05-05 06:59:45] 2026-05-05 04:59:14,194 | INFO     | cat /etc/os-release:
[2026-05-05 06:59:45] NAME="CentOS Linux"
[2026-05-05 06:59:45] VERSION="7 (Core)"
[2026-05-05 06:59:45] ID="centos"
[2026-05-05 06:59:45] ID_LIKE="rhel fedora"
[2026-05-05 06:59:45] VERSION_ID="7"
[2026-05-05 06:59:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 06:59:45] ANSI_COLOR="0;31"
[2026-05-05 06:59:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 06:59:45] HOME_URL="https://www.centos.org/"
[2026-05-05 06:59:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 06:59:45] 
[2026-05-05 06:59:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 06:59:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 06:59:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 06:59:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 06:59:45] 
[2026-05-05 06:59:45] 2026-05-05 04:59:14,195 | INFO     | ***************************************
[2026-05-05 06:59:45] 2026-05-05 04:59:14,698 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/2
[2026-05-05 06:59:45] 2026-05-05 04:59:14,716 | INFO     | sufficient remaining disk space (38404096000 B)
[2026-05-05 06:59:45] 2026-05-05 04:59:14,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 06:59:45] 2026-05-05 04:59:14,717 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 06:59:45] 2026-05-05 04:59:14,717 | INFO     | update_server=False
[2026-05-05 06:59:45] 2026-05-05 04:59:14,717 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 06:59:45] 2026-05-05 04:59:14,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 06:59:45] 2026-05-05 04:59:15,099 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-05 06:59:45] 2026-05-05 04:59:15,100 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-05 06:59:45] 2026-05-05 04:59:15,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 06:59:45] 2026-05-05 04:59:15,100 | INFO     | will abort loop
[2026-05-05 06:59:45] 2026-05-05 04:59:15,145 | INFO     | all payload control threads have been joined
[2026-05-05 06:59:45] 2026-05-05 04:59:15,171 | INFO     | all job control threads have been joined
[2026-05-05 06:59:45] 2026-05-05 04:59:15,208 | INFO     | all data control threads have been joined
[2026-05-05 06:59:45] 2026-05-05 04:59:15,722 | INFO     | [job] retrieve thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:15,811 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:15,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 06:59:45] 2026-05-05 04:59:16,105 | INFO     | [job] job monitor thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:16,151 | INFO     | [payload] control thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:16,164 | INFO     | [data] copytool_in thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:16,177 | INFO     | [job] control thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:16,213 | INFO     | [data] control thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:16,296 | INFO     | [payload] validate_post thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:16,366 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:16,659 | INFO     | [payload] failed_post thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:16,722 | INFO     | [data] copytool_out thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:17,050 | INFO     | [job] validate thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:17,105 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:17,108 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:17,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 06:59:45] 2026-05-05 04:59:18,551 | INFO     | [job] queue monitor thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:19,888 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 06:59:45] 2026-05-05 04:59:27,636 | INFO     | [monitor] cgroup control has ended
[2026-05-05 06:59:45] 2026-05-05 04:59:29,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22862409078592)>', '<ExcThread(monitor, started 22862100408064)>']
[2026-05-05 06:59:45] 2026-05-05 04:59:34,340 | INFO     | all workflow threads have been joined
[2026-05-05 06:59:45] 2026-05-05 04:59:34,340 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 06:59:45] 2026-05-05 04:59:34,341 | INFO     | traces error code: 0
[2026-05-05 06:59:45] 2026-05-05 04:59:34,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 06:59:45] 2026-05-05 04:59:45,640 | INFO     | PID=433723 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-05 06:59:45] 2026-05-05 04:59:45,640 | INFO     | .. there are 8 such processes running
[2026-05-05 06:59:45] 2026-05-05 04:59:45,641 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 06:59:45] 2026-05-05 04:59:45,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 06:59:45] 2026-05-05 04:59:45,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 06:59:45] 2026-05-05 04:59:45,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 06:59:45] 2026-05-05 04:59:45,641 | CRITICAL | thread 'MainThread' is not alive
[2026-05-05 06:59:45] 2026-05-05 04:59:45,641 | INFO     | [monitor] control thread has ended
[2026-05-05 06:59:45] 2026-05-05 04:59:45,783 [wrapper] ==== pilot stdout END ====
[2026-05-05 06:59:45] 2026-05-05 04:59:45,786 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 06:59:45] 2026-05-05 04:59:45,789 [wrapper] pilotpid: 433723
[2026-05-05 06:59:45] 2026-05-05 04:59:45,792 [wrapper] Pilot exit status: 0
[2026-05-05 06:59:45] 2026-05-05 04:59:45,802 [wrapper] pandaids: 7128381861
[2026-05-05 06:59:45] 2026-05-05 04:59:45,876 [wrapper] cleanup supervisor_pilot  584584 433724
[2026-05-05 06:59:45] 2026-05-05 04:59:45,879 [wrapper] Test setup, not cleaning
[2026-05-05 06:59:45] 2026-05-05 04:59:45,882 [wrapper] apfmon messages muted
[2026-05-05 06:59:45] 2026-05-05 04:59:45,885 [wrapper] ==== wrapper stdout END ====
[2026-05-05 06:59:45] 2026-05-05 04:59:45,888 [wrapper] ==== wrapper stderr END ====
[2026-05-05 06:59:45]  *** Error codes and diagnostics ***
[2026-05-05 06:59:45]     "exeErrorCode": 0,
[2026-05-05 06:59:45]     "pilotErrorCode": 0,
[2026-05-05 06:59:45]  *** Listing of results directory ***
[2026-05-05 06:59:45] total 407500
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc      5631 May  4 05:58 queuedata.json
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc    683926 May  4 05:58 pilot3.tar.gz
[2026-05-05 06:59:45] -rwx------. 1 boinc boinc     36322 May  4 05:59 runpilot2-wrapper.sh
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc       100 May  5 04:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 06:59:45] -rwxr-xr-x. 1 boinc boinc      7986 May  5 04:43 run_atlas
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc       105 May  5 04:43 job.xml
[2026-05-05 06:59:45] -rw-r--r--. 2 boinc boinc 241571323 May  5 04:43 EVNT.50011119._000059.pool.root.1
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc      6483 May  5 04:43 init_data.xml
[2026-05-05 06:59:45] drwxrwx--x. 2 boinc boinc      4096 May  5 04:43 shared
[2026-05-05 06:59:45] -rw-r--r--. 2 boinc boinc    697416 May  5 04:43 input.tar.gz
[2026-05-05 06:59:45] -rw-r--r--. 2 boinc boinc     15667 May  5 04:43 start_atlas.sh
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc         0 May  5 04:43 boinc_lockfile
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc      2561 May  5 04:44 pandaJob.out
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc   1002597 May  5 04:44 agis_schedconf.cvmfs.json
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc   1505918 May  5 04:44 agis_ddmendpoints.agis.ALL.json
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc       451 May  5 04:44 workernode_map.json
[2026-05-05 06:59:45] drwx------. 5 boinc boinc      4096 May  5 04:44 pilot3
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc 169441561 May  5 06:58 HITS.50011124._001472.pool.root.1
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc       487 May  5 06:58 boinc_task_state.xml
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc      1030 May  5 06:59 memory_monitor_summary.json
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc    288445 May  5 06:59 log.50011124._001472.job.log.tgz.1
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc      6416 May  5 06:59 heartbeat_new.json
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc      6307 May  5 06:59 heartbeat.json
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc        95 May  5 06:59 pilot_heartbeat.json
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc      8192 May  5 06:59 boinc_mmap_file
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc        27 May  5 06:59 wrapper_checkpoint.txt
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc       891 May  5 06:59 pilotlog.txt
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc    780470 May  5 06:59 log.50011124._001472.job.log.1
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc       357 May  5 06:59 output.list
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc       410 May  5 06:59 runtime_log
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc   1085440 May  5 06:59 result.tar.gz
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc      8827 May  5 06:59 runtime_log.err
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc       662 May  5 06:59 19840b6dbcc5.diag
[2026-05-05 06:59:45] -rw-r--r--. 1 boinc boinc     20789 May  5 06:59 stderr.txt
[2026-05-05 06:59:45] HITS file was successfully produced:
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc 169441561 May  5 06:58 shared/HITS.pool.root.1
[2026-05-05 06:59:45]  *** Contents of shared directory: ***
[2026-05-05 06:59:45] total 403152
[2026-05-05 06:59:45] -rw-r--r--. 2 boinc boinc 241571323 May  5 04:43 ATLAS.root_0
[2026-05-05 06:59:45] -rw-r--r--. 2 boinc boinc    697416 May  5 04:43 input.tar.gz
[2026-05-05 06:59:45] -rw-r--r--. 2 boinc boinc     15667 May  5 04:43 start_atlas.sh
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc 169441561 May  5 06:58 HITS.pool.root.1
[2026-05-05 06:59:45] -rw-------. 1 boinc boinc   1085440 May  5 06:59 result.tar.gz
06:59:47 (429801): run_atlas exited; CPU time 31044.715284
06:59:47 (429801): called boinc_finish(0)

</stderr_txt>
]]>

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