Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:21:25 (17173): wrapper (7.7.26015): starting
11:21:25 (17173): wrapper: running run_atlas (--nthreads 8)
[2026-05-04 11:21:25] Arguments: --nthreads 8
[2026-05-04 11:21:25] Threads: 8
[2026-05-04 11:21:25] Checking for CVMFS
[2026-05-04 11:21:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 11:21:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 11:21:30] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 11:21:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 11:21:31] 2.11.2.0 26242 26882 99428 159200 1 53 23637069 25165824 96 130560 0 9626879 99.891 6575154 8582 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-04 11:21:31] CVMFS is ok
[2026-05-04 11:21:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 11:21:31] Checking for apptainer binary...
[2026-05-04 11:21:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 11:21:31] Running /usr/bin/apptainer --version
[2026-05-04 11:21:31] apptainer version 1.3.2-1.el7
[2026-05-04 11:21:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 11:21:48] cg-vwn414.simple-grid.lan
[2026-05-04 11:21:48] apptainer works
[2026-05-04 11:21:48] Set ATHENA_PROC_NUMBER=8
[2026-05-04 11:21:48] Set ATHENA_CORE_NUMBER=8
[2026-05-04 11:21:48] Starting ATLAS job with PandaID=7121185155
[2026-05-04 11:21:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 15:31:02]  *** The last 200 lines of the pilot log: ***
[2026-05-04 15:31:02] 2026-05-04 13:30:01,960 | INFO     | this job has now completed (state=finished)
[2026-05-04 15:31:02] 2026-05-04 13:30:01,960 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 15:31:02] 2026-05-04 13:30:01,960 | INFO     | log transfer has been attempted: DONE
[2026-05-04 15:31:02] 2026-05-04 13:30:01,960 | INFO     | job 7121185155 has finished - writing final server update
[2026-05-04 15:31:02] 2026-05-04 13:30:01,961 | INFO     | total number of processed events: 400 (read)
[2026-05-04 15:31:02] 2026-05-04 13:30:01,963 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7121185155/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 15:31:02] 2026-05-04 13:30:01,963 | INFO     | extracted standard info from prmon json
[2026-05-04 15:31:02] 2026-05-04 13:30:01,963 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 15:31:02] 2026-05-04 13:30:01,964 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 15:31:02] 2026-05-04 13:30:01,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 15:31:02] 2026-05-04 13:30:01,977 | INFO     | fitting pss+swap vs Time
[2026-05-04 15:31:02] 2026-05-04 13:30:01,977 | INFO     | sum of square deviations: 3822136780.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,979 | INFO     | sum of deviations: 113696775587.00002
[2026-05-04 15:31:02] 2026-05-04 13:30:01,980 | INFO     | mean x (centered): 0.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,980 | INFO     | mean y: 2414677.5887445887
[2026-05-04 15:31:02] 2026-05-04 13:30:01,980 | INFO     | intersect: 2414677.5887445887
[2026-05-04 15:31:02] 2026-05-04 13:30:01,980 | INFO     | chi2: 9.084450926868998
[2026-05-04 15:31:02] 2026-05-04 13:30:01,981 | INFO     | sum of square deviations: 3579276412.5
[2026-05-04 15:31:02] 2026-05-04 13:30:01,983 | INFO     | sum of deviations: 126290037097.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,983 | INFO     | mean x (centered): 0.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,983 | INFO     | mean y: 2422416.6991150444
[2026-05-04 15:31:02] 2026-05-04 13:30:01,983 | INFO     | intersect: 2422416.6991150444
[2026-05-04 15:31:02] 2026-05-04 13:30:01,984 | INFO     | chi2: 8.404362475181724
[2026-05-04 15:31:02] 2026-05-04 13:30:01,984 | INFO     | current chi2=8.404362475181724 (change=7.486291215199175 %)
[2026-05-04 15:31:02] 2026-05-04 13:30:01,984 | INFO     | right removable region: 225
[2026-05-04 15:31:02] 2026-05-04 13:30:01,984 | INFO     | sum of square deviations: 3579276412.5
[2026-05-04 15:31:02] 2026-05-04 13:30:01,986 | INFO     | sum of deviations: 32069389395.000008
[2026-05-04 15:31:02] 2026-05-04 13:30:01,986 | INFO     | mean x (centered): 0.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,986 | INFO     | mean y: 2465910.2300884956
[2026-05-04 15:31:02] 2026-05-04 13:30:01,986 | INFO     | intersect: 2465910.2300884956
[2026-05-04 15:31:02] 2026-05-04 13:30:01,987 | INFO     | chi2: 3.726353761711601
[2026-05-04 15:31:02] 2026-05-04 13:30:01,987 | INFO     | current chi2=3.726353761711601 (change=58.980968781611246 %)
[2026-05-04 15:31:02] 2026-05-04 13:30:01,987 | INFO     | sum of square deviations: 3346927870.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,989 | INFO     | sum of deviations: -28435851622.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,989 | INFO     | mean x (centered): 0.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,990 | INFO     | mean y: 2505564.1312217196
[2026-05-04 15:31:02] 2026-05-04 13:30:01,990 | INFO     | intersect: 2505564.1312217196
[2026-05-04 15:31:02] 2026-05-04 13:30:01,990 | INFO     | chi2: 1.0011956750827087
[2026-05-04 15:31:02] 2026-05-04 13:30:01,990 | INFO     | current chi2=1.0011956750827087 (change=73.13202827466289 %)
[2026-05-04 15:31:02] 2026-05-04 13:30:01,991 | INFO     | sum of square deviations: 3124858590.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,992 | INFO     | sum of deviations: -35240598895.99999
[2026-05-04 15:31:02] 2026-05-04 13:30:01,993 | INFO     | mean x (centered): 0.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,993 | INFO     | mean y: 2510166.388888889
[2026-05-04 15:31:02] 2026-05-04 13:30:01,993 | INFO     | intersect: 2510166.388888889
[2026-05-04 15:31:02] 2026-05-04 13:30:01,993 | INFO     | chi2: 0.9076759647401866
[2026-05-04 15:31:02] 2026-05-04 13:30:01,993 | INFO     | current chi2=0.9076759647401866 (change=9.340802469486935 %)
[2026-05-04 15:31:02] 2026-05-04 13:30:01,994 | INFO     | left removable region: 15
[2026-05-04 15:31:02] 2026-05-04 13:30:01,994 | INFO     | sum of square deviations: 2871616632.5
[2026-05-04 15:31:02] 2026-05-04 13:30:01,996 | INFO     | sum of deviations: -20220729020.999992
[2026-05-04 15:31:02] 2026-05-04 13:30:01,996 | INFO     | mean x (centered): 0.0
[2026-05-04 15:31:02] 2026-05-04 13:30:01,996 | INFO     | mean y: 2520778.6666666665
[2026-05-04 15:31:02] 2026-05-04 13:30:01,996 | INFO     | intersect: 2520778.6666666665
[2026-05-04 15:31:02] 2026-05-04 13:30:01,997 | INFO     | chi2: 0.11787881943729028
[2026-05-04 15:31:02] 2026-05-04 13:30:01,997 | INFO     | current memory leak: -7.04 B/s (using 210 data points, chi2=0.12)
[2026-05-04 15:31:02] 2026-05-04 13:30:01,997 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-05-04 15:31:02] 2026-05-04 13:30:01,998 | INFO     | ..............................
[2026-05-04 15:31:02] 2026-05-04 13:30:01,998 | INFO     | . Timing measurements:
[2026-05-04 15:31:02] 2026-05-04 13:30:01,998 | INFO     | . get job = 0 s
[2026-05-04 15:31:02] 2026-05-04 13:30:01,998 | INFO     | . initial setup = 123 s
[2026-05-04 15:31:02] 2026-05-04 13:30:01,998 | INFO     | . payload setup = 254 s
[2026-05-04 15:31:02] 2026-05-04 13:30:01,998 | INFO     | . stage-in = 0 s
[2026-05-04 15:31:02] 2026-05-04 13:30:01,998 | INFO     | . payload execution = 14216 s
[2026-05-04 15:31:02] 2026-05-04 13:30:01,998 | INFO     | . stage-out = 4 s
[2026-05-04 15:31:02] 2026-05-04 13:30:01,998 | INFO     | . log creation = 1 s
[2026-05-04 15:31:02] 2026-05-04 13:30:01,998 | INFO     | ..............................
[2026-05-04 15:31:02] 2026-05-04 13:30:02,148 | INFO     | 
[2026-05-04 15:31:02] 2026-05-04 13:30:02,148 | INFO     | job summary report
[2026-05-04 15:31:02] 2026-05-04 13:30:02,148 | INFO     | --------------------------------------------------
[2026-05-04 15:31:02] 2026-05-04 13:30:02,149 | INFO     | PanDA job id: 7121185155
[2026-05-04 15:31:02] 2026-05-04 13:30:02,149 | INFO     | task id: 49263200
[2026-05-04 15:31:02] 2026-05-04 13:30:02,149 | INFO     | errors: (none)
[2026-05-04 15:31:02] 2026-05-04 13:30:02,149 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 15:31:02] 2026-05-04 13:30:02,149 | INFO     | pilot state: finished 
[2026-05-04 15:31:02] 2026-05-04 13:30:02,149 | INFO     | transexitcode: 0
[2026-05-04 15:31:02] 2026-05-04 13:30:02,149 | INFO     | exeerrorcode: 0
[2026-05-04 15:31:02] 2026-05-04 13:30:02,149 | INFO     | exeerrordiag: 
[2026-05-04 15:31:02] 2026-05-04 13:30:02,149 | INFO     | exitcode: 0
[2026-05-04 15:31:02] 2026-05-04 13:30:02,149 | INFO     | exitmsg: OK
[2026-05-04 15:31:02] 2026-05-04 13:30:02,150 | INFO     | cpuconsumptiontime: 53075 s
[2026-05-04 15:31:02] 2026-05-04 13:30:02,150 | INFO     | nevents: 400
[2026-05-04 15:31:02] 2026-05-04 13:30:02,150 | INFO     | neventsw: 0
[2026-05-04 15:31:02] 2026-05-04 13:30:02,150 | INFO     | pid: 25636
[2026-05-04 15:31:02] 2026-05-04 13:30:02,150 | INFO     | pgrp: 25636
[2026-05-04 15:31:02] 2026-05-04 13:30:02,150 | INFO     | corecount: 8
[2026-05-04 15:31:02] 2026-05-04 13:30:02,150 | INFO     | event service: False
[2026-05-04 15:31:02] 2026-05-04 13:30:02,150 | INFO     | sizes: {0: 2269783, 1: 2270468, 2: 2272297, 13: 2272297, 14475: 2303102, 14481: 2312095, 14482: 2312279, 14484: 2312473}
[2026-05-04 15:31:02] 2026-05-04 13:30:02,150 | INFO     | --------------------------------------------------
[2026-05-04 15:31:02] 2026-05-04 13:30:02,151 | INFO     | 
[2026-05-04 15:31:02] 2026-05-04 13:30:02,151 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-04 15:31:02] 2026-05-04 13:30:02,513 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,514 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,514 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,514 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,516 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 15:31:02] 2026-05-04 13:30:02,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,516 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 15:31:02] 2026-05-04 13:30:02,516 | INFO     | job 7121185155 has completed (purged errors)
[2026-05-04 15:31:02] 2026-05-04 13:30:02,516 | INFO     | overall cleanup function is called
[2026-05-04 15:31:02] 2026-05-04 13:30:03,525 | INFO     | --- collectZombieJob: --- 10, [25636]
[2026-05-04 15:31:02] 2026-05-04 13:30:03,525 | INFO     | zombie collector waiting for pid 25636
[2026-05-04 15:31:02] 2026-05-04 13:30:03,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 15:31:02] 2026-05-04 13:30:03,525 | INFO     | collected zombie processes
[2026-05-04 15:31:02] 2026-05-04 13:30:03,526 | INFO     | will attempt to kill all subprocesses of pid=25636
[2026-05-04 15:31:02] 2026-05-04 13:30:03,588 | INFO     | process IDs to be killed: [25636] (in reverse order)
[2026-05-04 15:31:02] 2026-05-04 13:30:04,364 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 15:31:02] 2026-05-04 13:30:04,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 15:31:02] 2026-05-04 13:30:04,366 | INFO     | did not find any defunct processes belonging to 25636
[2026-05-04 15:31:02] 2026-05-04 13:30:04,367 | INFO     | did not find any defunct processes belonging to 25636
[2026-05-04 15:31:02] 2026-05-04 13:30:04,368 | INFO     | Ready for new job
[2026-05-04 15:31:02] 2026-05-04 13:30:04,370 | INFO     | ***************************************
[2026-05-04 15:31:02] 2026-05-04 13:30:04,370 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 15:31:02] 2026-05-04 13:30:04,370 | INFO     | ***************************************
[2026-05-04 15:31:02] 2026-05-04 13:30:04,370 | INFO     | 
[2026-05-04 15:31:02] 2026-05-04 13:30:04,370 | INFO     | pilot is running in a VM
[2026-05-04 15:31:02] 2026-05-04 13:30:04,371 | INFO     | architecture information:
[2026-05-04 15:31:02] 2026-05-04 13:30:04,383 | INFO     | executing command: cat /etc/os-release
[2026-05-04 15:31:02] 2026-05-04 13:30:04,669 | INFO     | cat /etc/os-release:
[2026-05-04 15:31:02] NAME="CentOS Linux"
[2026-05-04 15:31:02] VERSION="7 (Core)"
[2026-05-04 15:31:02] ID="centos"
[2026-05-04 15:31:02] ID_LIKE="rhel fedora"
[2026-05-04 15:31:02] VERSION_ID="7"
[2026-05-04 15:31:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 15:31:02] ANSI_COLOR="0;31"
[2026-05-04 15:31:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 15:31:02] HOME_URL="https://www.centos.org/"
[2026-05-04 15:31:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 15:31:02] 
[2026-05-04 15:31:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 15:31:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 15:31:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 15:31:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 15:31:02] 
[2026-05-04 15:31:02] 2026-05-04 13:30:04,670 | INFO     | ***************************************
[2026-05-04 15:31:02] 2026-05-04 13:30:05,173 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-04 15:31:02] 2026-05-04 13:30:05,441 | INFO     | sufficient remaining disk space (497068015616 B)
[2026-05-04 15:31:02] 2026-05-04 13:30:05,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 15:31:02] 2026-05-04 13:30:05,442 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 15:31:02] 2026-05-04 13:30:05,442 | INFO     | update_server=False
[2026-05-04 15:31:02] 2026-05-04 13:30:05,442 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 15:31:02] 2026-05-04 13:30:06,001 | INFO     | all data control threads have been joined
[2026-05-04 15:31:02] 2026-05-04 13:30:06,039 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 15:31:02] 2026-05-04 13:30:06,039 | INFO     | aborting loop
[2026-05-04 15:31:02] 2026-05-04 13:30:06,375 | INFO     | all payload control threads have been joined
[2026-05-04 15:31:02] 2026-05-04 13:30:06,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 15:31:02] 2026-05-04 13:30:06,448 | INFO     | [job] retrieve thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:06,490 | INFO     | [payload] failed_post thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:06,690 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:06,714 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:06,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 15:31:02] 2026-05-04 13:30:07,007 | INFO     | [data] control thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:07,045 | INFO     | [job] job monitor thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:07,073 | INFO     | all job control threads have been joined
[2026-05-04 15:31:02] 2026-05-04 13:30:07,118 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:07,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 15:31:02] 2026-05-04 13:30:07,185 | INFO     | [data] copytool_in thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:07,236 | INFO     | [job] validate thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:07,381 | INFO     | [payload] control thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:07,398 | INFO     | [payload] validate_post thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:07,674 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:08,079 | INFO     | [job] control thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:08,169 | INFO     | [job] queue monitor thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:08,869 | INFO     | [data] copytool_out thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:10,447 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 15:31:02] 2026-05-04 13:30:33,957 | INFO     | PID=21156 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-04 15:31:02] 2026-05-04 13:30:33,957 | INFO     | .. there are 2 such processes running
[2026-05-04 15:31:02] 2026-05-04 13:30:33,963 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 15:31:02] 2026-05-04 13:30:33,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 15:31:02] 2026-05-04 13:30:33,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 15:31:02] 2026-05-04 13:30:49,641 | INFO     | [monitor] cgroup control has ended
[2026-05-04 15:31:02] 2026-05-04 13:30:51,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140442106939200)>', '<ExcThread(monitor, started 140441445975808)>']
[2026-05-04 15:31:02] 2026-05-04 13:30:52,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 15:31:02] 2026-05-04 13:30:52,071 | INFO     | [monitor] control thread has ended
[2026-05-04 15:31:02] 2026-05-04 13:30:56,321 | INFO     | all workflow threads have been joined
[2026-05-04 15:31:02] 2026-05-04 13:30:56,321 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 15:31:02] 2026-05-04 13:30:56,322 | INFO     | traces error code: 0
[2026-05-04 15:31:02] 2026-05-04 13:30:56,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 15:31:02] 2026-05-04 13:30:56,842 [wrapper] ==== pilot stdout END ====
[2026-05-04 15:31:02] 2026-05-04 13:30:56,955 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 15:31:02] 2026-05-04 13:30:57,055 [wrapper] pilotpid: 21156
[2026-05-04 15:31:02] 2026-05-04 13:30:57,144 [wrapper] Pilot exit status: 0
[2026-05-04 15:31:02] 2026-05-04 13:30:57,603 [wrapper] pandaids: 7121185155
[2026-05-04 15:31:02] 2026-05-04 13:30:58,665 [wrapper] cleanup supervisor_pilot 32763 21157
[2026-05-04 15:31:02] 2026-05-04 13:30:58,766 [wrapper] Test setup, not cleaning
[2026-05-04 15:31:02] 2026-05-04 13:30:58,868 [wrapper] apfmon messages muted
[2026-05-04 15:31:02] 2026-05-04 13:30:58,992 [wrapper] ==== wrapper stdout END ====
[2026-05-04 15:31:02] 2026-05-04 13:30:59,113 [wrapper] ==== wrapper stderr END ====
[2026-05-04 15:31:02]  *** Error codes and diagnostics ***
[2026-05-04 15:31:02]     "exeErrorCode": 0,
[2026-05-04 15:31:02]     "pilotErrorCode": 0,
[2026-05-04 15:31:02]  *** Listing of results directory ***
[2026-05-04 15:31:02] total 411292
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc    683926 May  1 21:08 pilot3.tar.gz
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc      5631 May  1 21:08 queuedata.json
[2026-05-04 15:31:02] -rwx------. 1 boinc boinc     36322 May  1 21:09 runpilot2-wrapper.sh
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc       100 May  4 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 15:31:02] -rwxr-xr-x. 1 boinc boinc      7986 May  4 11:21 run_atlas
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc       105 May  4 11:21 job.xml
[2026-05-04 15:31:02] -rw-r--r--. 2 boinc boinc 224892464 May  4 11:21 EVNT.49263198._001702.pool.root.1
[2026-05-04 15:31:02] -rw-r--r--. 2 boinc boinc    697424 May  4 11:21 input.tar.gz
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc      6307 May  4 11:21 init_data.xml
[2026-05-04 15:31:02] -rw-r--r--. 2 boinc boinc     15667 May  4 11:21 start_atlas.sh
[2026-05-04 15:31:02] drwxrwx--x. 2 boinc boinc        68 May  4 11:21 shared
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc         0 May  4 11:21 boinc_lockfile
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc      2574 May  4 11:21 pandaJob.out
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc       415 May  4 11:28 workernode_map.json
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc   1002664 May  4 11:28 agis_schedconf.cvmfs.json
[2026-05-04 15:31:02] drwx------. 5 boinc boinc      4096 May  4 11:28 pilot3
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc 188625090 May  4 15:28 HITS.49263200._083496.pool.root.1
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc       489 May  4 15:28 boinc_task_state.xml
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc      1011 May  4 15:29 memory_monitor_summary.json
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc   1505918 May  4 15:29 agis_ddmendpoints.agis.ALL.json
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc    411467 May  4 15:29 log.49263200._083496.job.log.tgz.1
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc      6341 May  4 15:30 heartbeat_new.json
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc      6232 May  4 15:30 heartbeat.json
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc        95 May  4 15:30 pilot_heartbeat.json
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc      8192 May  4 15:30 boinc_mmap_file
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc        28 May  4 15:30 wrapper_checkpoint.txt
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc      4883 May  4 15:30 pilotlog.txt
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc   1349319 May  4 15:30 log.49263200._083496.job.log.1
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc       357 May  4 15:31 output.list
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc       410 May  4 15:31 runtime_log
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc   1781760 May  4 15:31 result.tar.gz
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc      8439 May  4 15:31 runtime_log.err
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc       655 May  4 15:31 fa5f97914aee.diag
[2026-05-04 15:31:02] -rw-r--r--. 1 boinc boinc     20644 May  4 15:31 stderr.txt
[2026-05-04 15:31:02] HITS file was successfully produced:
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc 188625090 May  4 15:28 shared/HITS.pool.root.1
[2026-05-04 15:31:02]  *** Contents of shared directory: ***
[2026-05-04 15:31:02] total 406272
[2026-05-04 15:31:02] -rw-r--r--. 2 boinc boinc 224892464 May  4 11:21 ATLAS.root_0
[2026-05-04 15:31:02] -rw-r--r--. 2 boinc boinc    697424 May  4 11:21 input.tar.gz
[2026-05-04 15:31:02] -rw-r--r--. 2 boinc boinc     15667 May  4 11:21 start_atlas.sh
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc 188625090 May  4 15:28 HITS.pool.root.1
[2026-05-04 15:31:02] -rw-------. 1 boinc boinc   1781760 May  4 15:31 result.tar.gz
15:31:04 (17173): run_atlas exited; CPU time 53210.100366
15:31:04 (17173): called boinc_finish(0)

</stderr_txt>
]]>

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