Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:39:03 (3112787): wrapper (7.7.26015): starting
09:39:03 (3112787): wrapper: running run_atlas (--nthreads 12)
[2026-05-04 09:39:03] Arguments: --nthreads 12
[2026-05-04 09:39:03] Threads: 12
[2026-05-04 09:39:03] Checking for CVMFS
[2026-05-04 09:39:03] No cvmfs_config command found, will try listing directly
[2026-05-04 09:39:03] CVMFS is ok
[2026-05-04 09:39:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 09:39:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 09:39:03] Further information can be found at the LHC@home message board.
[2026-05-04 09:39:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 09:39:03] Checking for apptainer binary...
[2026-05-04 09:39:03] which: no apptainer in ((null))
[2026-05-04 09:39:03] apptainer is not installed, using version from CVMFS
[2026-05-04 09:39:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 09:39:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot24/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-04 09:39:03] apptainer works
[2026-05-04 09:39:03] Set ATHENA_PROC_NUMBER=12
[2026-05-04 09:39:03] Set ATHENA_CORE_NUMBER=12
[2026-05-04 09:39:03] Starting ATLAS job with PandaID=7128354778
[2026-05-04 09:39:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot24/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 10:01:21]  *** The last 200 lines of the pilot log: ***
[2026-05-04 10:01:21]  direct_access_wan=False
[2026-05-04 10:01:21]  domain=
[2026-05-04 10:01:21]  filesize=329005
[2026-05-04 10:01:21]  filetype=log
[2026-05-04 10:01:21]  guid=25ce1b9c-af0a-4101-b532-fd7fd9e062e4
[2026-05-04 10:01:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-04 10:01:21]  is_altstaged=None
[2026-05-04 10:01:21]  is_tar=False
[2026-05-04 10:01:21]  lfn=log.50010947._000113.job.log.tgz.1
[2026-05-04 10:01:21]  mtime=0
[2026-05-04 10:01:21]  protocol_id=None
[2026-05-04 10:01:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-04 10:01:21]  replicas=None
[2026-05-04 10:01:21]  scope=mc23_13p6TeV
[2026-05-04 10:01:21]  status=None
[2026-05-04 10:01:21]  status_code=0
[2026-05-04 10:01:21]  storage_token=
[2026-05-04 10:01:21]  surl=/var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7128354778/log.50010947._000113.job.log.tgz.1
[2026-05-04 10:01:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/75/log.50010947._000113.job.log.tgz.1
[2026-05-04 10:01:21]  workdir=None
[2026-05-04 10:01:21] ]
[2026-05-04 10:01:21] 2026-05-04 08:00:15,516 | INFO     | transferring file log.50010947._000113.job.log.tgz.1 from /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7128354778/log.50010947._000113.job.log.tgz.1 to /var/lib/b
[2026-05-04 10:01:21] 2026-05-04 08:00:15,516 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7128354778/log.50010947._000113.job.log.tgz.1 /var/lib/boinc/var/slot24/slots/5/lo
[2026-05-04 10:01:21] 2026-05-04 08:00:15,527 | INFO     | adding to output.list: log.50010947._000113.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/75/log.50010947._000113.job.log.tg
[2026-05-04 10:01:21] 2026-05-04 08:00:15,527 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-04 10:01:21] 2026-05-04 08:00:15,527 | INFO     | summary of transferred files:
[2026-05-04 10:01:21] 2026-05-04 08:00:15,527 | INFO     |  -- lfn=log.50010947._000113.job.log.tgz.1, status_code=0, status=transferred
[2026-05-04 10:01:21] 2026-05-04 08:00:15,527 | INFO     | stage-out finished correctly
[2026-05-04 10:01:21] 2026-05-04 08:00:17,173 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-04 10:01:21] 2026-05-04 08:00:17,377 | INFO     | monitor loop #100: job 0:7128354778 is in state 'finished'
[2026-05-04 10:01:21] 2026-05-04 08:00:17,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-04 10:01:21] 2026-05-04 08:00:18,338 | INFO     | job 7128354778 has state=finished
[2026-05-04 10:01:21] 2026-05-04 08:00:18,339 | INFO     | preparing for final server update for job 7128354778 in state='finished'
[2026-05-04 10:01:21] 2026-05-04 08:00:18,339 | INFO     | reading metadata from: /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7128354778/jobReport.json
[2026-05-04 10:01:21] 2026-05-04 08:00:18,340 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot24/slots/5/workernode_map.json
[2026-05-04 10:01:21] 2026-05-04 08:00:18,341 | INFO     | this job has now completed (state=finished)
[2026-05-04 10:01:21] 2026-05-04 08:00:18,341 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 10:01:21] 2026-05-04 08:00:18,341 | INFO     | log transfer has been attempted: DONE
[2026-05-04 10:01:21] 2026-05-04 08:00:18,341 | INFO     | job 7128354778 has finished - writing final server update
[2026-05-04 10:01:21] 2026-05-04 08:00:18,341 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1912037/.job.ad'
[2026-05-04 10:01:21] 2026-05-04 08:00:18,341 | INFO     | total number of processed events: 400 (read)
[2026-05-04 10:01:21] 2026-05-04 08:00:18,358 | INFO     | using path: /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7128354778/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 10:01:21] 2026-05-04 08:00:18,358 | INFO     | extracted standard info from prmon json
[2026-05-04 10:01:21] 2026-05-04 08:00:18,358 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 10:01:21] 2026-05-04 08:00:18,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 10:01:21] 2026-05-04 08:00:18,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 10:01:21] 2026-05-04 08:00:18,359 | INFO     | fitting pss+swap vs Time
[2026-05-04 10:01:21] 2026-05-04 08:00:18,359 | INFO     | sum of square deviations: 846527.5
[2026-05-04 10:01:21] 2026-05-04 08:00:18,359 | INFO     | sum of deviations: 28537569.0
[2026-05-04 10:01:21] 2026-05-04 08:00:18,359 | INFO     | mean x (centered): 0.0
[2026-05-04 10:01:21] 2026-05-04 08:00:18,359 | INFO     | mean y: 2743247.5714285714
[2026-05-04 10:01:21] 2026-05-04 08:00:18,359 | INFO     | intersect: 2743247.5714285714
[2026-05-04 10:01:21] 2026-05-04 08:00:18,359 | INFO     | chi2: 3.38168009576555e-05
[2026-05-04 10:01:21] 2026-05-04 08:00:18,359 | INFO     | current memory leak: 33.71 B/s (using 14 data points, chi2=0.00)
[2026-05-04 10:01:21] 2026-05-04 08:00:18,359 | INFO     | could have reported an average CPU frequency of 3642 MHz (4 samples)
[2026-05-04 10:01:21] 2026-05-04 08:00:18,360 | INFO     | ..............................
[2026-05-04 10:01:21] 2026-05-04 08:00:18,360 | INFO     | . Timing measurements:
[2026-05-04 10:01:21] 2026-05-04 08:00:18,360 | INFO     | . get job = 0 s
[2026-05-04 10:01:21] 2026-05-04 08:00:18,360 | INFO     | . initial setup = 4 s
[2026-05-04 10:01:21] 2026-05-04 08:00:18,360 | INFO     | . payload setup = 5 s
[2026-05-04 10:01:21] 2026-05-04 08:00:18,360 | INFO     | . stage-in = 0 s
[2026-05-04 10:01:21] 2026-05-04 08:00:18,360 | INFO     | . payload execution = 1240 s
[2026-05-04 10:01:21] 2026-05-04 08:00:18,360 | INFO     | . stage-out = 0 s
[2026-05-04 10:01:21] 2026-05-04 08:00:18,360 | INFO     | . log creation = 0 s
[2026-05-04 10:01:21] 2026-05-04 08:00:18,360 | INFO     | ..............................
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | 
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | job summary report
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | --------------------------------------------------
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | PanDA job id: 7128354778
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | task id: 50010947
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | errors: (none)
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | pilot state: finished 
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | transexitcode: 0
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | exeerrorcode: 0
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | exeerrordiag: 
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | exitcode: 0
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | exitmsg: OK
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | cpuconsumptiontime: 12924 s
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | nevents: 400
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | neventsw: 0
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | pid: 3123071
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | pgrp: 3123071
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | corecount: 12
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | event service: False
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | sizes: {0: 2270531, 1: 2272161, 11: 2272189, 1250: 2305827, 1252: 2305827, 1253: 2306021}
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | --------------------------------------------------
[2026-05-04 10:01:21] 2026-05-04 08:00:18,404 | INFO     | 
[2026-05-04 10:01:21] 2026-05-04 08:00:18,405 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot24/slots/5
[2026-05-04 10:01:21] 2026-05-04 08:00:18,419 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | job 7128354778 has completed (purged errors)
[2026-05-04 10:01:21] 2026-05-04 08:00:18,420 | INFO     | overall cleanup function is called
[2026-05-04 10:01:21] 2026-05-04 08:00:19,428 | INFO     | --- collectZombieJob: --- 10, [3123071]
[2026-05-04 10:01:21] 2026-05-04 08:00:19,428 | INFO     | zombie collector waiting for pid 3123071
[2026-05-04 10:01:21] 2026-05-04 08:00:19,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 10:01:21] 2026-05-04 08:00:19,428 | INFO     | collected zombie processes
[2026-05-04 10:01:21] 2026-05-04 08:00:19,428 | INFO     | will attempt to kill all subprocesses of pid=3123071
[2026-05-04 10:01:21] 2026-05-04 08:00:19,643 | INFO     | process IDs to be killed: [3123071] (in reverse order)
[2026-05-04 10:01:21] 2026-05-04 08:00:19,758 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 10:01:21] 2026-05-04 08:00:19,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 10:01:21] 2026-05-04 08:00:19,777 | INFO     | did not find any defunct processes belonging to 3123071
[2026-05-04 10:01:21] 2026-05-04 08:00:19,792 | INFO     | did not find any defunct processes belonging to 3123071
[2026-05-04 10:01:21] 2026-05-04 08:00:19,792 | INFO     | Ready for new job
[2026-05-04 10:01:21] 2026-05-04 08:00:19,793 | INFO     | ***************************************
[2026-05-04 10:01:21] 2026-05-04 08:00:19,793 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 10:01:21] 2026-05-04 08:00:19,793 | INFO     | ***************************************
[2026-05-04 10:01:21] 2026-05-04 08:00:19,793 | INFO     | 
[2026-05-04 10:01:21] 2026-05-04 08:00:19,798 | INFO     | architecture information:
[2026-05-04 10:01:21] 2026-05-04 08:00:19,798 | INFO     | executing command: cat /etc/os-release
[2026-05-04 10:01:21] 2026-05-04 08:00:19,811 | INFO     | cat /etc/os-release:
[2026-05-04 10:01:21] NAME="CentOS Linux"
[2026-05-04 10:01:21] VERSION="7 (Core)"
[2026-05-04 10:01:21] ID="centos"
[2026-05-04 10:01:21] ID_LIKE="rhel fedora"
[2026-05-04 10:01:21] VERSION_ID="7"
[2026-05-04 10:01:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 10:01:21] ANSI_COLOR="0;31"
[2026-05-04 10:01:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 10:01:21] HOME_URL="https://www.centos.org/"
[2026-05-04 10:01:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 10:01:21] 
[2026-05-04 10:01:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 10:01:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 10:01:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 10:01:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 10:01:21] 
[2026-05-04 10:01:21] 2026-05-04 08:00:19,811 | INFO     | ***************************************
[2026-05-04 10:01:21] 2026-05-04 08:00:20,314 | INFO     | executing command: df -mP /var/lib/boinc/var/slot24/slots/5
[2026-05-04 10:01:21] 2026-05-04 08:00:20,331 | INFO     | sufficient remaining disk space (230429818880 B)
[2026-05-04 10:01:21] 2026-05-04 08:00:20,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 10:01:21] 2026-05-04 08:00:20,331 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 10:01:21] 2026-05-04 08:00:20,331 | INFO     | update_server=False
[2026-05-04 10:01:21] 2026-05-04 08:00:20,331 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 10:01:21] 2026-05-04 08:00:20,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 10:01:21] 2026-05-04 08:00:20,422 | INFO     | all payload control threads have been joined
[2026-05-04 10:01:21] 2026-05-04 08:00:20,473 | INFO     | all job control threads have been joined
[2026-05-04 10:01:21] 2026-05-04 08:00:20,750 | INFO     | all data control threads have been joined
[2026-05-04 10:01:21] 2026-05-04 08:00:20,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 10:01:21] 2026-05-04 08:00:20,887 | INFO     | aborting loop
[2026-05-04 10:01:21] 2026-05-04 08:00:21,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 10:01:21] 2026-05-04 08:00:21,336 | INFO     | [job] retrieve thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:21,337 | INFO     | [job] queue monitor thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:21,428 | INFO     | [payload] control thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:21,478 | INFO     | [job] control thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:21,755 | INFO     | [data] control thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:21,892 | INFO     | [job] job monitor thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:22,135 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:22,193 | INFO     | [job] validate thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:22,317 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:22,414 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:22,530 | INFO     | [data] copytool_in thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:22,579 | INFO     | [payload] validate_post thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:22,898 | INFO     | [payload] failed_post thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:23,066 | INFO     | [data] copytool_out thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:23,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 10:01:21] 2026-05-04 08:00:27,227 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:31,196 | INFO     | job.realtimelogging is not enabled
[2026-05-04 10:01:21] 2026-05-04 08:00:32,202 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 10:01:21] 2026-05-04 08:00:49,952 | INFO     | PID=3117348 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 10:01:21] 2026-05-04 08:00:49,952 | INFO     | .. there are 14 such processes running
[2026-05-04 10:01:21] 2026-05-04 08:00:49,953 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 10:01:21] 2026-05-04 08:00:49,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 10:01:21] 2026-05-04 08:00:49,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 10:01:21] 2026-05-04 08:01:15,586 | INFO     | [monitor] cgroup control has ended
[2026-05-04 10:01:21] 2026-05-04 08:01:15,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22663750457152)>', '<ExcThread(monitor, started 22663432972032)>']
[2026-05-04 10:01:21] 2026-05-04 08:01:16,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 10:01:21] 2026-05-04 08:01:16,081 | INFO     | [monitor] control thread has ended
[2026-05-04 10:01:21] 2026-05-04 08:01:20,989 | INFO     | all workflow threads have been joined
[2026-05-04 10:01:21] 2026-05-04 08:01:20,990 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 10:01:21] 2026-05-04 08:01:20,990 | INFO     | traces error code: 0
[2026-05-04 10:01:21] 2026-05-04 08:01:20,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 10:01:21] 2026-05-04 08:01:21,085 [wrapper] ==== pilot stdout END ====
[2026-05-04 10:01:21] 2026-05-04 08:01:21,088 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 10:01:21] 2026-05-04 08:01:21,089 [wrapper] pilotpid: 3117348
[2026-05-04 10:01:21] 2026-05-04 08:01:21,091 [wrapper] Pilot exit status: 0
[2026-05-04 10:01:21] 2026-05-04 08:01:21,098 [wrapper] pandaids: 7128354778
[2026-05-04 10:01:21] 2026-05-04 08:01:21,188 [wrapper] cleanup supervisor_pilot 3249954 3117349
[2026-05-04 10:01:21] 2026-05-04 08:01:21,190 [wrapper] Test setup, not cleaning
[2026-05-04 10:01:21] 2026-05-04 08:01:21,192 [wrapper] apfmon messages muted
[2026-05-04 10:01:21] 2026-05-04 08:01:21,194 [wrapper] ==== wrapper stdout END ====
[2026-05-04 10:01:21] 2026-05-04 08:01:21,195 [wrapper] ==== wrapper stderr END ====
[2026-05-04 10:01:21]  *** Error codes and diagnostics ***
[2026-05-04 10:01:21]     "exeErrorCode": 0,
[2026-05-04 10:01:21]     "pilotErrorCode": 0,
[2026-05-04 10:01:21]  *** Listing of results directory ***
[2026-05-04 10:01:21] total 413744
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc    683926 May  4 05:03 pilot3.tar.gz
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc      5631 May  4 05:42 queuedata.json
[2026-05-04 10:01:21] -rwx------. 1 boinc boinc     36322 May  4 05:42 runpilot2-wrapper.sh
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc       100 May  4 09:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 10:01:21] -rwxr-xr-x. 1 boinc boinc      7986 May  4 09:38 run_atlas
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc       105 May  4 09:38 job.xml
[2026-05-04 10:01:21] -rw-r--r--. 2 boinc boinc 246527195 May  4 09:39 EVNT.50010944._000005.pool.root.1
[2026-05-04 10:01:21] -rw-r--r--. 2 boinc boinc     15667 May  4 09:39 start_atlas.sh
[2026-05-04 10:01:21] drwxrwx--x. 2 boinc boinc      4096 May  4 09:39 shared
[2026-05-04 10:01:21] -rw-r--r--. 2 boinc boinc    697392 May  4 09:39 input.tar.gz
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc      6627 May  4 09:39 init_data.xml
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc         0 May  4 09:39 boinc_lockfile
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc      2512 May  4 09:39 pandaJob.out
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc   1002662 May  4 09:39 agis_schedconf.cvmfs.json
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc   1505932 May  4 09:39 agis_ddmendpoints.agis.ALL.json
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc       444 May  4 09:39 workernode_map.json
[2026-05-04 10:01:21] drwx------. 5 boinc boinc      4096 May  4 09:39 pilot3
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc       487 May  4 09:59 boinc_task_state.xml
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc 172015741 May  4 09:59 HITS.50010947._000113.pool.root.1
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc      1031 May  4 10:00 memory_monitor_summary.json
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc    329005 May  4 10:00 log.50010947._000113.job.log.tgz.1
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc      6369 May  4 10:00 heartbeat_new.json
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc      6260 May  4 10:00 heartbeat.json
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc        95 May  4 10:00 pilot_heartbeat.json
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc      8192 May  4 10:01 boinc_mmap_file
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc        27 May  4 10:01 wrapper_checkpoint.txt
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc      4905 May  4 10:01 pilotlog.txt
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc    168187 May  4 10:01 log.50010947._000113.job.log.1
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc       357 May  4 10:01 output.list
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc       410 May  4 10:01 runtime_log
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc    512000 May  4 10:01 result.tar.gz
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc      8829 May  4 10:01 runtime_log.err
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc       656 May  4 10:01 15b36ae5bc7b.diag
[2026-05-04 10:01:21] -rw-r--r--. 1 boinc boinc     20828 May  4 10:01 stderr.txt
[2026-05-04 10:01:21] HITS file was successfully produced:
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc 172015741 May  4 09:59 shared/HITS.pool.root.1
[2026-05-04 10:01:21]  *** Contents of shared directory: ***
[2026-05-04 10:01:21] total 409948
[2026-05-04 10:01:21] -rw-r--r--. 2 boinc boinc 246527195 May  4 09:39 ATLAS.root_0
[2026-05-04 10:01:21] -rw-r--r--. 2 boinc boinc     15667 May  4 09:39 start_atlas.sh
[2026-05-04 10:01:21] -rw-r--r--. 2 boinc boinc    697392 May  4 09:39 input.tar.gz
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc 172015741 May  4 09:59 HITS.pool.root.1
[2026-05-04 10:01:21] -rw-------. 1 boinc boinc    512000 May  4 10:01 result.tar.gz
10:01:22 (3112787): run_atlas exited; CPU time 12951.517895
10:01:22 (3112787): called boinc_finish(0)

</stderr_txt>
]]>

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