Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:56:40 (3303603): wrapper (7.7.26015): starting
07:56:40 (3303603): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 07:56:40] Arguments: --nthreads 4
[2026-05-04 07:56:40] Threads: 4
[2026-05-04 07:56:40] Checking for CVMFS
[2026-05-04 07:56:40] No cvmfs_config command found, will try listing directly
[2026-05-04 07:56:40] CVMFS is ok
[2026-05-04 07:56:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 07:56:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 07:56:40] Further information can be found at the LHC@home message board.
[2026-05-04 07:56:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 07:56:40] Checking for apptainer binary...
[2026-05-04 07:56:40] which: no apptainer in ((null))
[2026-05-04 07:56:40] apptainer is not installed, using version from CVMFS
[2026-05-04 07:56:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 07:56:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-05-04 07:56:41] apptainer works
[2026-05-04 07:56:41] Set ATHENA_PROC_NUMBER=4
[2026-05-04 07:56:41] Set ATHENA_CORE_NUMBER=4
[2026-05-04 07:56:41] Starting ATLAS job with PandaID=7128328040
[2026-05-04 07:56:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 10:30:16]  *** The last 200 lines of the pilot log: ***
[2026-05-04 10:30:16] 2026-05-04 08:29:12,498 | INFO     | total number of processed events: 400 (read)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,516 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/PanDA_Pilot-7128328040/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,517 | INFO     | extracted standard info from prmon json
[2026-05-04 10:30:16] 2026-05-04 08:29:12,517 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 10:30:16] 2026-05-04 08:29:12,518 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 10:30:16] 2026-05-04 08:29:12,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 10:30:16] 2026-05-04 08:29:12,521 | INFO     | fitting pss+swap vs Time
[2026-05-04 10:30:16] 2026-05-04 08:29:12,522 | INFO     | sum of square deviations: 1046484737.5
[2026-05-04 10:30:16] 2026-05-04 08:29:12,523 | INFO     | sum of deviations: 15102557418.500002
[2026-05-04 10:30:16] 2026-05-04 08:29:12,523 | INFO     | mean x (centered): 0.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,523 | INFO     | mean y: 2294750.7133333334
[2026-05-04 10:30:16] 2026-05-04 08:29:12,523 | INFO     | intersect: 2294750.7133333334
[2026-05-04 10:30:16] 2026-05-04 08:29:12,523 | INFO     | chi2: 1.9951357833751433
[2026-05-04 10:30:16] 2026-05-04 08:29:12,524 | INFO     | sum of square deviations: 945282840.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,525 | INFO     | sum of deviations: 22914424056.000004
[2026-05-04 10:30:16] 2026-05-04 08:29:12,525 | INFO     | mean x (centered): 0.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,525 | INFO     | mean y: 2306170.827586207
[2026-05-04 10:30:16] 2026-05-04 08:29:12,525 | INFO     | intersect: 2306170.827586207
[2026-05-04 10:30:16] 2026-05-04 08:29:12,525 | INFO     | chi2: 1.3245727890250056
[2026-05-04 10:30:16] 2026-05-04 08:29:12,525 | INFO     | current chi2=1.3245727890250056 (change=33.60989261671983 %)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,526 | INFO     | sum of square deviations: 850825255.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,526 | INFO     | sum of deviations: 21933451458.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,527 | INFO     | mean x (centered): 0.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,527 | INFO     | mean y: 2304586.442857143
[2026-05-04 10:30:16] 2026-05-04 08:29:12,527 | INFO     | intersect: 2304586.442857143
[2026-05-04 10:30:16] 2026-05-04 08:29:12,527 | INFO     | chi2: 1.3254237116223164
[2026-05-04 10:30:16] 2026-05-04 08:29:12,527 | INFO     | current chi2=1.3254237116223164 (change=-0.06424128627443246 %)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,527 | INFO     | right removable region: 139
[2026-05-04 10:30:16] 2026-05-04 08:29:12,528 | INFO     | sum of square deviations: 945282840.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,529 | INFO     | sum of deviations: -4140099890.0000005
[2026-05-04 10:30:16] 2026-05-04 08:29:12,529 | INFO     | mean x (centered): 0.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,529 | INFO     | mean y: 2323269.5655172416
[2026-05-04 10:30:16] 2026-05-04 08:29:12,529 | INFO     | intersect: 2323269.5655172416
[2026-05-04 10:30:16] 2026-05-04 08:29:12,529 | INFO     | chi2: 0.6928318921768714
[2026-05-04 10:30:16] 2026-05-04 08:29:12,529 | INFO     | current chi2=0.6928318921768714 (change=65.27394787111595 %)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,530 | INFO     | sum of square deviations: 850825255.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,530 | INFO     | sum of deviations: -5066194173.5
[2026-05-04 10:30:16] 2026-05-04 08:29:12,531 | INFO     | mean x (centered): 0.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,531 | INFO     | mean y: 2324747.95
[2026-05-04 10:30:16] 2026-05-04 08:29:12,531 | INFO     | intersect: 2324747.95
[2026-05-04 10:30:16] 2026-05-04 08:29:12,531 | INFO     | chi2: 0.6908731087713806
[2026-05-04 10:30:16] 2026-05-04 08:29:12,531 | INFO     | current chi2=0.6908731087713806 (change=0.28272131055287264 %)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,531 | INFO     | left removable region: 10
[2026-05-04 10:30:16] 2026-05-04 08:29:12,531 | INFO     | sum of square deviations: 665612480.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,532 | INFO     | sum of deviations: 2574466570.0000014
[2026-05-04 10:30:16] 2026-05-04 08:29:12,532 | INFO     | mean x (centered): 0.0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,532 | INFO     | mean y: 2337547.7906976743
[2026-05-04 10:30:16] 2026-05-04 08:29:12,532 | INFO     | intersect: 2337547.7906976743
[2026-05-04 10:30:16] 2026-05-04 08:29:12,533 | INFO     | chi2: 0.0004522763919514457
[2026-05-04 10:30:16] 2026-05-04 08:29:12,533 | INFO     | current memory leak: 3.87 B/s (using 129 data points, chi2=0.00)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,533 | INFO     | could have reported an average CPU frequency of 2581 MHz (9 samples)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,534 | INFO     | ..............................
[2026-05-04 10:30:16] 2026-05-04 08:29:12,534 | INFO     | . Timing measurements:
[2026-05-04 10:30:16] 2026-05-04 08:29:12,534 | INFO     | . get job = 0 s
[2026-05-04 10:30:16] 2026-05-04 08:29:12,534 | INFO     | . initial setup = 5 s
[2026-05-04 10:30:16] 2026-05-04 08:29:12,534 | INFO     | . payload setup = 9 s
[2026-05-04 10:30:16] 2026-05-04 08:29:12,534 | INFO     | . stage-in = 0 s
[2026-05-04 10:30:16] 2026-05-04 08:29:12,534 | INFO     | . payload execution = 9110 s
[2026-05-04 10:30:16] 2026-05-04 08:29:12,534 | INFO     | . stage-out = 0 s
[2026-05-04 10:30:16] 2026-05-04 08:29:12,534 | INFO     | . log creation = 0 s
[2026-05-04 10:30:16] 2026-05-04 08:29:12,534 | INFO     | ..............................
[2026-05-04 10:30:16] 2026-05-04 08:29:12,810 | INFO     | 
[2026-05-04 10:30:16] 2026-05-04 08:29:12,810 | INFO     | job summary report
[2026-05-04 10:30:16] 2026-05-04 08:29:12,811 | INFO     | --------------------------------------------------
[2026-05-04 10:30:16] 2026-05-04 08:29:12,811 | INFO     | PanDA job id: 7128328040
[2026-05-04 10:30:16] 2026-05-04 08:29:12,811 | INFO     | task id: 50010997
[2026-05-04 10:30:16] 2026-05-04 08:29:12,811 | INFO     | errors: (none)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,811 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 10:30:16] 2026-05-04 08:29:12,811 | INFO     | pilot state: finished 
[2026-05-04 10:30:16] 2026-05-04 08:29:12,811 | INFO     | transexitcode: 0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,811 | INFO     | exeerrorcode: 0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,811 | INFO     | exeerrordiag: 
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | exitcode: 0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | exitmsg: OK
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | cpuconsumptiontime: 34766 s
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | nevents: 400
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | neventsw: 0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | pid: 3312652
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | pgrp: 3312652
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | corecount: 4
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | event service: False
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | sizes: {0: 2275489, 1: 2277119, 11: 2277147, 9123: 2305413, 9124: 2314489, 9125: 2314691}
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | --------------------------------------------------
[2026-05-04 10:30:16] 2026-05-04 08:29:12,812 | INFO     | 
[2026-05-04 10:30:16] 2026-05-04 08:29:12,813 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-05-04 10:30:16] 2026-05-04 08:29:12,835 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,835 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,835 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,835 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,835 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,835 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,837 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,837 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 10:30:16] 2026-05-04 08:29:12,837 | INFO     | job 7128328040 has completed (purged errors)
[2026-05-04 10:30:16] 2026-05-04 08:29:12,837 | INFO     | overall cleanup function is called
[2026-05-04 10:30:16] 2026-05-04 08:29:12,936 | WARNING  | process 3312652 can no longer be monitored (due to stat problems) - aborting
[2026-05-04 10:30:16] 2026-05-04 08:29:13,218 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 10:30:16] 2026-05-04 08:29:13,509 | INFO     | number of running child processes to parent process 3312652: 1
[2026-05-04 10:30:16] 2026-05-04 08:29:13,509 | INFO     | maximum number of monitored processes: 6
[2026-05-04 10:30:16] 2026-05-04 08:29:13,509 | INFO     | aborting job monitoring since job object (job id=7128328040) has expired
[2026-05-04 10:30:16] 2026-05-04 08:29:13,846 | INFO     | --- collectZombieJob: --- 10, [3312652]
[2026-05-04 10:30:16] 2026-05-04 08:29:13,846 | INFO     | zombie collector waiting for pid 3312652
[2026-05-04 10:30:16] 2026-05-04 08:29:13,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 10:30:16] 2026-05-04 08:29:13,846 | INFO     | collected zombie processes
[2026-05-04 10:30:16] 2026-05-04 08:29:13,846 | INFO     | will attempt to kill all subprocesses of pid=3312652
[2026-05-04 10:30:16] 2026-05-04 08:29:14,137 | INFO     | process IDs to be killed: [3312652] (in reverse order)
[2026-05-04 10:30:16] 2026-05-04 08:29:14,258 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 10:30:16] 2026-05-04 08:29:14,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 10:30:16] 2026-05-04 08:29:14,270 | INFO     | did not find any defunct processes belonging to 3312652
[2026-05-04 10:30:16] 2026-05-04 08:29:14,282 | INFO     | did not find any defunct processes belonging to 3312652
[2026-05-04 10:30:16] 2026-05-04 08:29:14,282 | INFO     | Ready for new job
[2026-05-04 10:30:16] 2026-05-04 08:29:14,284 | INFO     | ***************************************
[2026-05-04 10:30:16] 2026-05-04 08:29:14,284 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 10:30:16] 2026-05-04 08:29:14,284 | INFO     | ***************************************
[2026-05-04 10:30:16] 2026-05-04 08:29:14,284 | INFO     | 
[2026-05-04 10:30:16] 2026-05-04 08:29:14,288 | INFO     | architecture information:
[2026-05-04 10:30:16] 2026-05-04 08:29:14,289 | INFO     | executing command: cat /etc/os-release
[2026-05-04 10:30:16] 2026-05-04 08:29:14,304 | INFO     | cat /etc/os-release:
[2026-05-04 10:30:16] NAME="CentOS Linux"
[2026-05-04 10:30:16] VERSION="7 (Core)"
[2026-05-04 10:30:16] ID="centos"
[2026-05-04 10:30:16] ID_LIKE="rhel fedora"
[2026-05-04 10:30:16] VERSION_ID="7"
[2026-05-04 10:30:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 10:30:16] ANSI_COLOR="0;31"
[2026-05-04 10:30:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 10:30:16] HOME_URL="https://www.centos.org/"
[2026-05-04 10:30:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 10:30:16] 
[2026-05-04 10:30:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 10:30:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 10:30:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 10:30:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 10:30:16] 
[2026-05-04 10:30:16] 2026-05-04 08:29:14,305 | INFO     | ***************************************
[2026-05-04 10:30:16] 2026-05-04 08:29:14,808 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-05-04 10:30:16] 2026-05-04 08:29:14,824 | INFO     | sufficient remaining disk space (46947893248 B)
[2026-05-04 10:30:16] 2026-05-04 08:29:14,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 10:30:16] 2026-05-04 08:29:14,824 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 10:30:16] 2026-05-04 08:29:14,824 | INFO     | update_server=False
[2026-05-04 10:30:16] 2026-05-04 08:29:14,824 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 10:30:16] 2026-05-04 08:29:14,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 10:30:16] 2026-05-04 08:29:14,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 10:30:16] 2026-05-04 08:29:14,825 | INFO     | aborting loop
[2026-05-04 10:30:16] 2026-05-04 08:29:15,066 | INFO     | all data control threads have been joined
[2026-05-04 10:30:16] 2026-05-04 08:29:15,186 | INFO     | all payload control threads have been joined
[2026-05-04 10:30:16] 2026-05-04 08:29:15,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 10:30:16] 2026-05-04 08:29:15,829 | INFO     | [job] retrieve thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:15,830 | INFO     | [job] job monitor thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:15,950 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:16,039 | INFO     | [data] copytool_in thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:16,071 | INFO     | [data] control thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:16,091 | INFO     | [payload] failed_post thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:16,191 | INFO     | [payload] control thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:16,478 | INFO     | all job control threads have been joined
[2026-05-04 10:30:16] 2026-05-04 08:29:16,896 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:16,987 | INFO     | [job] validate thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:17,078 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:17,145 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:17,284 | INFO     | [payload] validate_post thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:17,413 | INFO     | [data] copytool_out thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:17,483 | INFO     | [job] control thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:17,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 10:30:16] 2026-05-04 08:29:18,650 | INFO     | [job] queue monitor thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:18,831 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 10:30:16] 2026-05-04 08:29:44,427 | INFO     | PID=3307498 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 10:30:16] 2026-05-04 08:29:44,427 | INFO     | .. there are 12 such processes running
[2026-05-04 10:30:16] 2026-05-04 08:29:44,428 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 10:30:16] 2026-05-04 08:29:44,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 10:30:16] 2026-05-04 08:29:44,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 10:30:16] 2026-05-04 08:30:10,870 | INFO     | [monitor] cgroup control has ended
[2026-05-04 10:30:16] 2026-05-04 08:30:11,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23450958059328)>', '<ExcThread(monitor, started 23450653550336)>']
[2026-05-04 10:30:16] 2026-05-04 08:30:12,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 10:30:16] 2026-05-04 08:30:12,551 | INFO     | [monitor] control thread has ended
[2026-05-04 10:30:16] 2026-05-04 08:30:16,671 | INFO     | all workflow threads have been joined
[2026-05-04 10:30:16] 2026-05-04 08:30:16,671 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 10:30:16] 2026-05-04 08:30:16,672 | INFO     | traces error code: 0
[2026-05-04 10:30:16] 2026-05-04 08:30:16,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 10:30:16] 2026-05-04 08:30:16,808 [wrapper] ==== pilot stdout END ====
[2026-05-04 10:30:16] 2026-05-04 08:30:16,812 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 10:30:16] 2026-05-04 08:30:16,814 [wrapper] pilotpid: 3307498
[2026-05-04 10:30:16] 2026-05-04 08:30:16,817 [wrapper] Pilot exit status: 0
[2026-05-04 10:30:16] 2026-05-04 08:30:16,828 [wrapper] pandaids: 7128328040
[2026-05-04 10:30:16] 2026-05-04 08:30:16,904 [wrapper] cleanup supervisor_pilot 3535766 3307499
[2026-05-04 10:30:16] 2026-05-04 08:30:16,907 [wrapper] Test setup, not cleaning
[2026-05-04 10:30:16] 2026-05-04 08:30:16,910 [wrapper] apfmon messages muted
[2026-05-04 10:30:16] 2026-05-04 08:30:16,913 [wrapper] ==== wrapper stdout END ====
[2026-05-04 10:30:16] 2026-05-04 08:30:16,915 [wrapper] ==== wrapper stderr END ====
[2026-05-04 10:30:16]  *** Error codes and diagnostics ***
[2026-05-04 10:30:16]     "exeErrorCode": 0,
[2026-05-04 10:30:16]     "pilotErrorCode": 0,
[2026-05-04 10:30:16]  *** Listing of results directory ***
[2026-05-04 10:30:16] total 405428
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc    683926 May  4 04:11 pilot3.tar.gz
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc      5631 May  4 04:55 queuedata.json
[2026-05-04 10:30:16] -rwx------. 1 boinc boinc     36322 May  4 04:56 runpilot2-wrapper.sh
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc       100 May  4 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 10:30:16] -rwxr-xr-x. 1 boinc boinc      7986 May  4 07:56 run_atlas
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc       105 May  4 07:56 job.xml
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc      6482 May  4 07:56 init_data.xml
[2026-05-04 10:30:16] -rw-r--r--. 2 boinc boinc 242933276 May  4 07:56 EVNT.50010994._000012.pool.root.1
[2026-05-04 10:30:16] -rw-r--r--. 2 boinc boinc     15667 May  4 07:56 start_atlas.sh
[2026-05-04 10:30:16] drwxrwx--x. 2 boinc boinc      4096 May  4 07:56 shared
[2026-05-04 10:30:16] -rw-r--r--. 2 boinc boinc    697392 May  4 07:56 input.tar.gz
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc         0 May  4 07:56 boinc_lockfile
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc      2537 May  4 07:56 pandaJob.out
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc   1003025 May  4 07:56 agis_schedconf.cvmfs.json
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc   1508687 May  4 07:56 agis_ddmendpoints.agis.ALL.json
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc       452 May  4 07:56 workernode_map.json
[2026-05-04 10:30:16] drwx------. 5 boinc boinc      4096 May  4 07:56 pilot3
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc 165765267 May  4 10:28 HITS.50010997._000180.pool.root.1
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc       487 May  4 10:28 boinc_task_state.xml
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc      1047 May  4 10:29 memory_monitor_summary.json
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc    281251 May  4 10:29 log.50010997._000180.job.log.tgz.1
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc      6411 May  4 10:29 heartbeat_new.json
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc      6302 May  4 10:29 heartbeat.json
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc        95 May  4 10:29 pilot_heartbeat.json
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc      8192 May  4 10:29 boinc_mmap_file
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc        27 May  4 10:29 wrapper_checkpoint.txt
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc      4832 May  4 10:30 pilotlog.txt
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc    882419 May  4 10:30 log.50010997._000180.job.log.1
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc       357 May  4 10:30 output.list
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc       410 May  4 10:30 runtime_log
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc   1177600 May  4 10:30 result.tar.gz
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc      8827 May  4 10:30 runtime_log.err
[2026-05-04 10:30:16] -rw-------. 1 boinc boinc       662 May  4 10:30 0acccf8377e7.diag
[2026-05-04 10:30:16] -rw-r--r--. 1 boinc boinc     20808 May  4 10:30 stderr.txt
[2026-05-04 10:30:17] HITS file was successfully produced:
[2026-05-04 10:30:17] -rw-------. 1 boinc boinc 165765267 May  4 10:28 shared/HITS.pool.root.1
[2026-05-04 10:30:17]  *** Contents of shared directory: ***
[2026-05-04 10:30:17] total 400980
[2026-05-04 10:30:17] -rw-r--r--. 2 boinc boinc 242933276 May  4 07:56 ATLAS.root_0
[2026-05-04 10:30:17] -rw-r--r--. 2 boinc boinc     15667 May  4 07:56 start_atlas.sh
[2026-05-04 10:30:17] -rw-r--r--. 2 boinc boinc    697392 May  4 07:56 input.tar.gz
[2026-05-04 10:30:17] -rw-------. 1 boinc boinc 165765267 May  4 10:28 HITS.pool.root.1
[2026-05-04 10:30:17] -rw-------. 1 boinc boinc   1177600 May  4 10:30 result.tar.gz
10:30:18 (3303603): run_atlas exited; CPU time 35072.478732
10:30:18 (3303603): called boinc_finish(0)

</stderr_txt>
]]>

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