Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:28:38 (1552): wrapper (7.7.26015): starting
01:28:38 (1552): wrapper: running run_atlas (--nthreads 8)
[2026-05-04 01:28:38] Arguments: --nthreads 8
[2026-05-04 01:28:38] Threads: 8
[2026-05-04 01:28:38] Checking for CVMFS
[2026-05-04 01:28:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 01:28:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 01:28:38] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 01:28:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 01:28:38] 2.11.2.0 26242 26289 96800 159185 0 223 23473947 25165825 495 130560 0 9181188 99.886 6521249 8690 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-04 01:28:38] CVMFS is ok
[2026-05-04 01:28:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 01:28:39] Checking for apptainer binary...
[2026-05-04 01:28:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 01:28:39] Running /usr/bin/apptainer --version
[2026-05-04 01:28:39] apptainer version 1.3.2-1.el7
[2026-05-04 01:28:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 01:28:41] cg-vwn414.simple-grid.lan
[2026-05-04 01:28:41] apptainer works
[2026-05-04 01:28:41] Set ATHENA_PROC_NUMBER=8
[2026-05-04 01:28:41] Set ATHENA_CORE_NUMBER=8
[2026-05-04 01:28:41] Starting ATLAS job with PandaID=7128204259
[2026-05-04 01:28:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 03:54:47]  *** The last 200 lines of the pilot log: ***
[2026-05-04 03:54:47] 2026-05-04 01:54:27,706 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7128204259/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 03:54:47] 2026-05-04 01:54:27,707 | INFO     | extracted standard info from prmon json
[2026-05-04 03:54:47] 2026-05-04 01:54:27,707 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 03:54:47] 2026-05-04 01:54:27,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 03:54:47] 2026-05-04 01:54:27,707 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 03:54:47] 2026-05-04 01:54:27,710 | INFO     | fitting pss+swap vs Time
[2026-05-04 03:54:47] 2026-05-04 01:54:27,711 | INFO     | sum of square deviations: 887813855.5
[2026-05-04 03:54:47] 2026-05-04 01:54:27,712 | INFO     | sum of deviations: 10595549817.999975
[2026-05-04 03:54:47] 2026-05-04 01:54:27,712 | INFO     | mean x (centered): 0.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,712 | INFO     | mean y: 2548352.1830985914
[2026-05-04 03:54:47] 2026-05-04 01:54:27,712 | INFO     | intersect: 2548352.1830985914
[2026-05-04 03:54:47] 2026-05-04 01:54:27,712 | INFO     | chi2: 2.9072551097920774
[2026-05-04 03:54:47] 2026-05-04 01:54:27,713 | INFO     | sum of square deviations: 797291228.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,714 | INFO     | sum of deviations: 10634625930.000006
[2026-05-04 03:54:47] 2026-05-04 01:54:27,714 | INFO     | mean x (centered): 0.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,714 | INFO     | mean y: 2548418.182481752
[2026-05-04 03:54:47] 2026-05-04 01:54:27,714 | INFO     | intersect: 2548418.182481752
[2026-05-04 03:54:47] 2026-05-04 01:54:27,714 | INFO     | chi2: 2.9125121291035034
[2026-05-04 03:54:47] 2026-05-04 01:54:27,714 | INFO     | current chi2=2.9125121291035034 (change=-0.180824148996063 %)
[2026-05-04 03:54:47] 2026-05-04 01:54:27,714 | INFO     | right removable region: 136
[2026-05-04 03:54:47] 2026-05-04 01:54:27,715 | INFO     | sum of square deviations: 797291228.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,716 | INFO     | sum of deviations: -25217849387.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,716 | INFO     | mean x (centered): 0.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,716 | INFO     | mean y: 2608252.4525547447
[2026-05-04 03:54:47] 2026-05-04 01:54:27,716 | INFO     | intersect: 2608252.4525547447
[2026-05-04 03:54:47] 2026-05-04 01:54:27,716 | INFO     | chi2: 0.20331223110610372
[2026-05-04 03:54:47] 2026-05-04 01:54:27,717 | INFO     | current chi2=0.20331223110610372 (change=93.00672890998396 %)
[2026-05-04 03:54:47] 2026-05-04 01:54:27,717 | INFO     | sum of square deviations: 713140813.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,718 | INFO     | sum of deviations: -27488662440.499996
[2026-05-04 03:54:47] 2026-05-04 01:54:27,718 | INFO     | mean x (centered): 0.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,718 | INFO     | mean y: 2612220.962121212
[2026-05-04 03:54:47] 2026-05-04 01:54:27,718 | INFO     | intersect: 2612220.962121212
[2026-05-04 03:54:47] 2026-05-04 01:54:27,719 | INFO     | chi2: 0.1344582730415156
[2026-05-04 03:54:47] 2026-05-04 01:54:27,719 | INFO     | current chi2=0.1344582730415156 (change=33.866117001418814 %)
[2026-05-04 03:54:47] 2026-05-04 01:54:27,719 | INFO     | sum of square deviations: 635130048.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,720 | INFO     | sum of deviations: -24416959830.000008
[2026-05-04 03:54:47] 2026-05-04 01:54:27,720 | INFO     | mean x (centered): 0.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,720 | INFO     | mean y: 2606209.5118110236
[2026-05-04 03:54:47] 2026-05-04 01:54:27,720 | INFO     | intersect: 2606209.5118110236
[2026-05-04 03:54:47] 2026-05-04 01:54:27,720 | INFO     | chi2: 0.1343954952903265
[2026-05-04 03:54:47] 2026-05-04 01:54:27,720 | INFO     | current chi2=0.1343954952903265 (change=0.04668939275290363 %)
[2026-05-04 03:54:47] 2026-05-04 01:54:27,721 | INFO     | left removable region: 15
[2026-05-04 03:54:47] 2026-05-04 01:54:27,721 | INFO     | sum of square deviations: 549294020.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,722 | INFO     | sum of deviations: -23028222056.999996
[2026-05-04 03:54:47] 2026-05-04 01:54:27,722 | INFO     | mean x (centered): 0.0
[2026-05-04 03:54:47] 2026-05-04 01:54:27,722 | INFO     | mean y: 2609172.876033058
[2026-05-04 03:54:47] 2026-05-04 01:54:27,722 | INFO     | intersect: 2609172.876033058
[2026-05-04 03:54:47] 2026-05-04 01:54:27,722 | INFO     | chi2: 0.12739856102453306
[2026-05-04 03:54:47] 2026-05-04 01:54:27,722 | INFO     | current memory leak: -41.92 B/s (using 121 data points, chi2=0.13)
[2026-05-04 03:54:47] 2026-05-04 01:54:27,723 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-05-04 03:54:47] 2026-05-04 01:54:27,723 | INFO     | ..............................
[2026-05-04 03:54:47] 2026-05-04 01:54:27,723 | INFO     | . Timing measurements:
[2026-05-04 03:54:47] 2026-05-04 01:54:27,723 | INFO     | . get job = 0 s
[2026-05-04 03:54:47] 2026-05-04 01:54:27,723 | INFO     | . initial setup = 12 s
[2026-05-04 03:54:47] 2026-05-04 01:54:27,723 | INFO     | . payload setup = 27 s
[2026-05-04 03:54:47] 2026-05-04 01:54:27,724 | INFO     | . stage-in = 0 s
[2026-05-04 03:54:47] 2026-05-04 01:54:27,724 | INFO     | . payload execution = 8668 s
[2026-05-04 03:54:47] 2026-05-04 01:54:27,724 | INFO     | . stage-out = 0 s
[2026-05-04 03:54:47] 2026-05-04 01:54:27,724 | INFO     | . log creation = 0 s
[2026-05-04 03:54:47] 2026-05-04 01:54:27,724 | INFO     | ..............................
[2026-05-04 03:54:47] 2026-05-04 01:54:28,207 | INFO     | 
[2026-05-04 03:54:47] 2026-05-04 01:54:28,207 | INFO     | job summary report
[2026-05-04 03:54:47] 2026-05-04 01:54:28,207 | INFO     | --------------------------------------------------
[2026-05-04 03:54:47] 2026-05-04 01:54:28,207 | INFO     | PanDA job id: 7128204259
[2026-05-04 03:54:47] 2026-05-04 01:54:28,208 | INFO     | task id: 50017005
[2026-05-04 03:54:47] 2026-05-04 01:54:28,208 | INFO     | errors: (none)
[2026-05-04 03:54:47] 2026-05-04 01:54:28,208 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 03:54:47] 2026-05-04 01:54:28,208 | INFO     | pilot state: finished 
[2026-05-04 03:54:47] 2026-05-04 01:54:28,208 | INFO     | transexitcode: 0
[2026-05-04 03:54:47] 2026-05-04 01:54:28,208 | INFO     | exeerrorcode: 0
[2026-05-04 03:54:47] 2026-05-04 01:54:28,208 | INFO     | exeerrordiag: 
[2026-05-04 03:54:47] 2026-05-04 01:54:28,208 | INFO     | exitcode: 0
[2026-05-04 03:54:47] 2026-05-04 01:54:28,208 | INFO     | exitmsg: OK
[2026-05-04 03:54:47] 2026-05-04 01:54:28,209 | INFO     | cpuconsumptiontime: 38740 s
[2026-05-04 03:54:47] 2026-05-04 01:54:28,209 | INFO     | nevents: 400
[2026-05-04 03:54:47] 2026-05-04 01:54:28,209 | INFO     | neventsw: 0
[2026-05-04 03:54:47] 2026-05-04 01:54:28,209 | INFO     | pid: 12657
[2026-05-04 03:54:47] 2026-05-04 01:54:28,209 | INFO     | pgrp: 12657
[2026-05-04 03:54:47] 2026-05-04 01:54:28,209 | INFO     | corecount: 8
[2026-05-04 03:54:47] 2026-05-04 01:54:28,209 | INFO     | event service: False
[2026-05-04 03:54:47] 2026-05-04 01:54:28,209 | INFO     | sizes: {0: 2275236, 1: 2277065, 8699: 2305040, 8700: 2314038, 8702: 2314094, 8703: 2314288}
[2026-05-04 03:54:47] 2026-05-04 01:54:28,209 | INFO     | --------------------------------------------------
[2026-05-04 03:54:47] 2026-05-04 01:54:28,210 | INFO     | 
[2026-05-04 03:54:47] 2026-05-04 01:54:28,210 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-04 03:54:47] 2026-05-04 01:54:28,235 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,235 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,235 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,236 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,237 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 03:54:47] 2026-05-04 01:54:28,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 03:54:47] 2026-05-04 01:54:28,238 | INFO     | job 7128204259 has completed (purged errors)
[2026-05-04 03:54:47] 2026-05-04 01:54:28,238 | INFO     | overall cleanup function is called
[2026-05-04 03:54:47] 2026-05-04 01:54:28,525 | WARNING  | process 12657 can no longer be monitored (due to stat problems) - aborting
[2026-05-04 03:54:47] 2026-05-04 01:54:28,577 | INFO     | using path: /var/lib/boinc/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 03:54:47] 2026-05-04 01:54:28,633 | INFO     | number of running child processes to parent process 12657: 1
[2026-05-04 03:54:47] 2026-05-04 01:54:28,634 | INFO     | maximum number of monitored processes: 6
[2026-05-04 03:54:47] 2026-05-04 01:54:28,634 | INFO     | aborting job monitoring since job object (job id=7128204259) has expired
[2026-05-04 03:54:47] 2026-05-04 01:54:29,246 | INFO     | --- collectZombieJob: --- 10, [12657]
[2026-05-04 03:54:47] 2026-05-04 01:54:29,247 | INFO     | zombie collector waiting for pid 12657
[2026-05-04 03:54:47] 2026-05-04 01:54:29,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 03:54:47] 2026-05-04 01:54:29,247 | INFO     | collected zombie processes
[2026-05-04 03:54:47] 2026-05-04 01:54:29,247 | INFO     | will attempt to kill all subprocesses of pid=12657
[2026-05-04 03:54:47] 2026-05-04 01:54:29,298 | INFO     | process IDs to be killed: [12657] (in reverse order)
[2026-05-04 03:54:47] 2026-05-04 01:54:29,346 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 03:54:47] 2026-05-04 01:54:29,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 03:54:47] 2026-05-04 01:54:29,348 | INFO     | did not find any defunct processes belonging to 12657
[2026-05-04 03:54:47] 2026-05-04 01:54:29,350 | INFO     | did not find any defunct processes belonging to 12657
[2026-05-04 03:54:47] 2026-05-04 01:54:29,350 | INFO     | Ready for new job
[2026-05-04 03:54:47] 2026-05-04 01:54:29,351 | INFO     | ***************************************
[2026-05-04 03:54:47] 2026-05-04 01:54:29,352 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 03:54:47] 2026-05-04 01:54:29,352 | INFO     | ***************************************
[2026-05-04 03:54:47] 2026-05-04 01:54:29,352 | INFO     | 
[2026-05-04 03:54:47] 2026-05-04 01:54:29,352 | INFO     | pilot is running in a VM
[2026-05-04 03:54:47] 2026-05-04 01:54:29,353 | INFO     | architecture information:
[2026-05-04 03:54:47] 2026-05-04 01:54:29,353 | INFO     | executing command: cat /etc/os-release
[2026-05-04 03:54:47] 2026-05-04 01:54:29,372 | INFO     | cat /etc/os-release:
[2026-05-04 03:54:47] NAME="CentOS Linux"
[2026-05-04 03:54:47] VERSION="7 (Core)"
[2026-05-04 03:54:47] ID="centos"
[2026-05-04 03:54:47] ID_LIKE="rhel fedora"
[2026-05-04 03:54:47] VERSION_ID="7"
[2026-05-04 03:54:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 03:54:47] ANSI_COLOR="0;31"
[2026-05-04 03:54:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 03:54:47] HOME_URL="https://www.centos.org/"
[2026-05-04 03:54:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 03:54:47] 
[2026-05-04 03:54:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 03:54:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 03:54:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 03:54:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 03:54:47] 
[2026-05-04 03:54:47] 2026-05-04 01:54:29,372 | INFO     | ***************************************
[2026-05-04 03:54:47] 2026-05-04 01:54:29,875 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-04 03:54:47] 2026-05-04 01:54:29,905 | INFO     | sufficient remaining disk space (497165533184 B)
[2026-05-04 03:54:47] 2026-05-04 01:54:29,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 03:54:47] 2026-05-04 01:54:29,906 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 03:54:47] 2026-05-04 01:54:29,906 | INFO     | update_server=False
[2026-05-04 03:54:47] 2026-05-04 01:54:29,906 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 03:54:47] 2026-05-04 01:54:29,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 03:54:47] 2026-05-04 01:54:29,907 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-04 03:54:47] 2026-05-04 01:54:29,907 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 03:54:47] 2026-05-04 01:54:29,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 03:54:47] 2026-05-04 01:54:29,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 03:54:47] 2026-05-04 01:54:29,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 03:54:47] 2026-05-04 01:54:29,908 | INFO     | aborting loop
[2026-05-04 03:54:47] 2026-05-04 01:54:30,773 | INFO     | all job control threads have been joined
[2026-05-04 03:54:47] 2026-05-04 01:54:30,783 | INFO     | all payload control threads have been joined
[2026-05-04 03:54:47] 2026-05-04 01:54:30,823 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 03:54:47] 2026-05-04 01:54:30,845 | INFO     | all data control threads have been joined
[2026-05-04 03:54:47] 2026-05-04 01:54:30,907 | INFO     | [job] retrieve thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:30,911 | INFO     | [job] job monitor thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:30,986 | INFO     | [payload] failed_post thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:31,209 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:31,227 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:31,649 | INFO     | [job] validate thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:31,653 | INFO     | [payload] validate_post thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:31,720 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:31,779 | INFO     | [job] control thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:31,789 | INFO     | [payload] control thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:31,833 | INFO     | [data] copytool_in thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:31,851 | INFO     | [data] control thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:32,829 | INFO     | [data] copytool_out thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:32,845 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 03:54:47] 2026-05-04 01:54:33,851 | INFO     | [job] queue monitor thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:33,913 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:38,323 | INFO     | [monitor] cgroup control has ended
[2026-05-04 03:54:47] 2026-05-04 01:54:40,748 | INFO     | job.realtimelogging is not enabled
[2026-05-04 03:54:47] 2026-05-04 01:54:41,754 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 03:54:47] 2026-05-04 01:54:42,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143994480448)>', '<ExcThread(monitor, started 140143415510784)>']
[2026-05-04 03:54:47] 2026-05-04 01:54:42,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 03:54:47] 2026-05-04 01:54:42,975 | INFO     | [monitor] control thread has ended
[2026-05-04 03:54:47] 2026-05-04 01:54:47,053 | INFO     | all workflow threads have been joined
[2026-05-04 03:54:47] 2026-05-04 01:54:47,054 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 03:54:47] 2026-05-04 01:54:47,054 | INFO     | traces error code: 0
[2026-05-04 03:54:47] 2026-05-04 01:54:47,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 03:54:47] 2026-05-04 01:54:47,205 [wrapper] ==== pilot stdout END ====
[2026-05-04 03:54:47] 2026-05-04 01:54:47,210 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 03:54:47] 2026-05-04 01:54:47,215 [wrapper] pilotpid: 6865
[2026-05-04 03:54:47] 2026-05-04 01:54:47,218 [wrapper] Pilot exit status: 0
[2026-05-04 03:54:47] 2026-05-04 01:54:47,236 [wrapper] pandaids: 7128204259
[2026-05-04 03:54:47] 2026-05-04 01:54:47,270 [wrapper] cleanup supervisor_pilot 20233 6866
[2026-05-04 03:54:47] 2026-05-04 01:54:47,276 [wrapper] Test setup, not cleaning
[2026-05-04 03:54:47] 2026-05-04 01:54:47,280 [wrapper] apfmon messages muted
[2026-05-04 03:54:47] 2026-05-04 01:54:47,285 [wrapper] ==== wrapper stdout END ====
[2026-05-04 03:54:47] 2026-05-04 01:54:47,290 [wrapper] ==== wrapper stderr END ====
[2026-05-04 03:54:47]  *** Error codes and diagnostics ***
[2026-05-04 03:54:47]     "exeErrorCode": 0,
[2026-05-04 03:54:47]     "pilotErrorCode": 0,
[2026-05-04 03:54:47]  *** Listing of results directory ***
[2026-05-04 03:54:47] total 460644
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc    683926 May  4 01:21 pilot3.tar.gz
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc      5631 May  4 01:26 queuedata.json
[2026-05-04 03:54:47] -rwx------. 1 boinc boinc     36322 May  4 01:27 runpilot2-wrapper.sh
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc       100 May  4 01:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 03:54:47] -rwxr-xr-x. 1 boinc boinc      7986 May  4 01:28 run_atlas
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc       105 May  4 01:28 job.xml
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc      6307 May  4 01:28 init_data.xml
[2026-05-04 03:54:47] -rw-r--r--. 2 boinc boinc 303505476 May  4 01:28 EVNT.50017000._000054.pool.root.1
[2026-05-04 03:54:47] -rw-r--r--. 2 boinc boinc     15667 May  4 01:28 start_atlas.sh
[2026-05-04 03:54:47] drwxrwx--x. 2 boinc boinc        68 May  4 01:28 shared
[2026-05-04 03:54:47] -rw-r--r--. 2 boinc boinc    697403 May  4 01:28 input.tar.gz
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc         0 May  4 01:28 boinc_lockfile
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc      2529 May  4 01:28 pandaJob.out
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc   1003017 May  4 01:29 agis_schedconf.cvmfs.json
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc   1508687 May  4 01:29 agis_ddmendpoints.agis.ALL.json
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc       415 May  4 01:29 workernode_map.json
[2026-05-04 03:54:47] drwx------. 5 boinc boinc      4096 May  4 01:29 pilot3
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc        95 May  4 03:53 pilot_heartbeat.json
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc       487 May  4 03:53 boinc_task_state.xml
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc 161711108 May  4 03:53 HITS.50017005._001386.pool.root.1
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc      8192 May  4 03:54 boinc_mmap_file
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc        27 May  4 03:54 wrapper_checkpoint.txt
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc      1009 May  4 03:54 memory_monitor_summary.json
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc    348492 May  4 03:54 log.50017005._001386.job.log.tgz.1
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc      6327 May  4 03:54 heartbeat_new.json
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc      6218 May  4 03:54 heartbeat.json
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc      4686 May  4 03:54 pilotlog.txt
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc    827179 May  4 03:54 log.50017005._001386.job.log.1
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc       357 May  4 03:54 output.list
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc       410 May  4 03:54 runtime_log
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc   1198080 May  4 03:54 result.tar.gz
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc      8438 May  4 03:54 runtime_log.err
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc       652 May  4 03:54 d9e92d905734.diag
[2026-05-04 03:54:47] -rw-r--r--. 1 boinc boinc     20603 May  4 03:54 stderr.txt
[2026-05-04 03:54:47] HITS file was successfully produced:
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc 161711108 May  4 03:53 shared/HITS.pool.root.1
[2026-05-04 03:54:47]  *** Contents of shared directory: ***
[2026-05-04 03:54:47] total 456192
[2026-05-04 03:54:47] -rw-r--r--. 2 boinc boinc 303505476 May  4 01:28 ATLAS.root_0
[2026-05-04 03:54:47] -rw-r--r--. 2 boinc boinc     15667 May  4 01:28 start_atlas.sh
[2026-05-04 03:54:47] -rw-r--r--. 2 boinc boinc    697403 May  4 01:28 input.tar.gz
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc 161711108 May  4 03:53 HITS.pool.root.1
[2026-05-04 03:54:47] -rw-------. 1 boinc boinc   1198080 May  4 03:54 result.tar.gz
03:54:48 (1552): run_atlas exited; CPU time 38805.100235
03:54:48 (1552): called boinc_finish(0)

</stderr_txt>
]]>

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