Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:16:43 (21657): wrapper (7.7.26015): starting
01:16:43 (21657): wrapper: running run_atlas (--nthreads 3)
[2026-05-04 01:16:43] Arguments: --nthreads 3
[2026-05-04 01:16:43] Threads: 3
[2026-05-04 01:16:43] Checking for CVMFS
[2026-05-04 01:16:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-04 01:16:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-04 01:16:45] Running cvmfs_config stat atlas.cern.ch
[2026-05-04 01:16:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-04 01:16:45] 2.9.2.0 7580 75 50636 159184 0 50 27615035 36864000 0 130560 0 54836 99.966 6715 5813 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-05-04 01:16:45] CVMFS is ok
[2026-05-04 01:16:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 01:16:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 01:16:45] Further information can be found at the LHC@home message board.
[2026-05-04 01:16:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 01:16:45] Checking for apptainer binary...
[2026-05-04 01:16:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-04 01:16:45] Running /usr/bin/apptainer --version
[2026-05-04 01:16:45] apptainer version 1.4.1-1.1
[2026-05-04 01:16:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 01:16:45] atlasA215
[2026-05-04 01:16:45] apptainer works
[2026-05-04 01:16:45] Set ATHENA_PROC_NUMBER=3
[2026-05-04 01:16:45] Set ATHENA_CORE_NUMBER=3
[2026-05-04 01:16:45] Starting ATLAS job with PandaID=7128144415
[2026-05-04 01:16:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 02:32:08]  *** The last 200 lines of the pilot log: ***
[2026-05-04 02:32:08]  scope=mc23_13p6TeV
[2026-05-04 02:32:08]  status=None
[2026-05-04 02:32:08]  status_code=0
[2026-05-04 02:32:08]  storage_token=
[2026-05-04 02:32:08]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7128144415/log.50011124._001041.job.log.tgz.1
[2026-05-04 02:32:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/d5/log.50011124._001041.job.log.tgz.1
[2026-05-04 02:32:08]  workdir=None
[2026-05-04 02:32:08] ]
[2026-05-04 02:32:08] 2026-05-04 00:31:32,410 | INFO     | transferring file log.50011124._001041.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7128144415/log.50011124._001041.job.log.tgz.1 to /local/data/boinc/
[2026-05-04 02:32:08] 2026-05-04 00:31:32,410 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7128144415/log.50011124._001041.job.log.tgz.1 /local/data/boinc/slots/0/log.50011124._0010
[2026-05-04 02:32:08] 2026-05-04 00:31:32,424 | INFO     | adding to output.list: log.50011124._001041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/d5/log.50011124._001041.job.log.tg
[2026-05-04 02:32:08] 2026-05-04 00:31:32,425 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-04 02:32:08] 2026-05-04 00:31:32,425 | INFO     | summary of transferred files:
[2026-05-04 02:32:08] 2026-05-04 00:31:32,425 | INFO     |  -- lfn=log.50011124._001041.job.log.tgz.1, status_code=0, status=transferred
[2026-05-04 02:32:08] 2026-05-04 00:31:32,425 | INFO     | stage-out finished correctly
[2026-05-04 02:32:08] 2026-05-04 00:31:33,933 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-04 02:32:08] 2026-05-04 00:31:34,712 | WARNING  | process 30133 can no longer be monitored (due to stat problems) - aborting
[2026-05-04 02:32:08] 2026-05-04 00:31:34,712 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7128144415/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 02:32:08] 2026-05-04 00:31:34,712 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7128144415/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 02:32:08] 2026-05-04 00:31:34,712 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-04 02:32:08] 2026-05-04 00:31:34,712 | WARNING  | maxPSS not found in memory monitor output
[2026-05-04 02:32:08] 2026-05-04 00:31:34,713 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2291690 B
[2026-05-04 02:32:08] 2026-05-04 00:31:34,713 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15831 B
[2026-05-04 02:32:08] 2026-05-04 00:31:34,713 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-05-04 02:32:08] 2026-05-04 00:31:34,723 | INFO     | sufficient remaining disk space (378831634432 B)
[2026-05-04 02:32:08] 2026-05-04 00:31:34,724 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-05-04 02:32:08] 2026-05-04 00:31:34,724 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-7128144415: 2586926 B (within 5033164800 B limit)
[2026-05-04 02:32:08] 2026-05-04 00:31:34,724 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-7128144415/HITS.50011124._001041.pool.root.1 does not exist (skip from workdir size calculation)
[2026-05-04 02:32:08] 2026-05-04 00:31:34,724 | INFO     | total size of present files: 0 B (workdir size: 2586926 B)
[2026-05-04 02:32:08] 2026-05-04 00:31:34,724 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7128144415/HITS.50011124._001041.pool.root.1 since it does not exist
[2026-05-04 02:32:08] 2026-05-04 00:31:34,751 | INFO     | number of running child processes to parent process 30133: 1
[2026-05-04 02:32:08] 2026-05-04 00:31:34,751 | INFO     | maximum number of monitored processes: 6
[2026-05-04 02:32:08] 2026-05-04 00:31:36,059 | INFO     | job 7128144415 has state=finished
[2026-05-04 02:32:08] 2026-05-04 00:31:36,059 | INFO     | preparing for final server update for job 7128144415 in state='finished'
[2026-05-04 02:32:08] 2026-05-04 00:31:36,059 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7128144415/jobReport.json
[2026-05-04 02:32:08] 2026-05-04 00:31:36,061 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-05-04 02:32:08] 2026-05-04 00:31:36,061 | INFO     | this job has now completed (state=finished)
[2026-05-04 02:32:08] 2026-05-04 00:31:36,061 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 02:32:08] 2026-05-04 00:31:36,061 | INFO     | log transfer has been attempted: DONE
[2026-05-04 02:32:08] 2026-05-04 00:31:36,061 | INFO     | job 7128144415 has finished - writing final server update
[2026-05-04 02:32:08] 2026-05-04 00:31:36,061 | INFO     | total number of processed events: 400 (read)
[2026-05-04 02:32:08] 2026-05-04 00:31:36,063 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7128144415/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 02:32:08] 2026-05-04 00:31:36,063 | INFO     | extracted standard info from prmon json
[2026-05-04 02:32:08] 2026-05-04 00:31:36,063 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 02:32:08] 2026-05-04 00:31:36,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 02:32:08] 2026-05-04 00:31:36,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 02:32:08] 2026-05-04 00:31:36,064 | INFO     | fitting pss+swap vs Time
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | sum of square deviations: 93240818.0
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | sum of deviations: -1635365409.0000007
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | mean x (centered): 0.0
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | mean y: 2519974.194029851
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | intersect: 2519974.194029851
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | chi2: 0.4688959548966442
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | current memory leak: -17.54 B/s (using 67 data points, chi2=0.47)
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | could have reported an average CPU frequency of 3586 MHz (6 samples)
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | ..............................
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | . Timing measurements:
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | . get job = 0 s
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | . initial setup = 3 s
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | . payload setup = 5 s
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | . stage-in = 0 s
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | . payload execution = 4457 s
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | . stage-out = 0 s
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | . log creation = 0 s
[2026-05-04 02:32:08] 2026-05-04 00:31:36,065 | INFO     | ..............................
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | 
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | job summary report
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | --------------------------------------------------
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | PanDA job id: 7128144415
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | task id: 50011124
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | errors: (none)
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | pilot state: finished 
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | transexitcode: 0
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | exeerrorcode: 0
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | exeerrordiag: 
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | exitcode: 0
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | exitmsg: OK
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | cpuconsumptiontime: 12108 s
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | nevents: 400
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | neventsw: 0
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | pid: 30133
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | pgrp: 30133
[2026-05-04 02:32:08] 2026-05-04 00:31:36,097 | INFO     | corecount: 3
[2026-05-04 02:32:08] 2026-05-04 00:31:36,098 | INFO     | event service: False
[2026-05-04 02:32:08] 2026-05-04 00:31:36,098 | INFO     | sizes: {0: 2277138, 10: 2277138, 4466: 2312377, 4468: 2312377, 4470: 2312599}
[2026-05-04 02:32:08] 2026-05-04 00:31:36,098 | INFO     | --------------------------------------------------
[2026-05-04 02:32:08] 2026-05-04 00:31:36,098 | INFO     | 
[2026-05-04 02:32:08] 2026-05-04 00:31:36,098 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,112 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 02:32:08] 2026-05-04 00:31:36,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,112 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 02:32:08] 2026-05-04 00:31:36,112 | INFO     | job 7128144415 has completed (purged errors)
[2026-05-04 02:32:08] 2026-05-04 00:31:36,112 | INFO     | overall cleanup function is called
[2026-05-04 02:32:08] 2026-05-04 00:31:37,118 | INFO     | --- collectZombieJob: --- 10, [30133]
[2026-05-04 02:32:08] 2026-05-04 00:31:37,118 | INFO     | zombie collector waiting for pid 30133
[2026-05-04 02:32:08] 2026-05-04 00:31:37,119 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 02:32:08] 2026-05-04 00:31:37,119 | INFO     | collected zombie processes
[2026-05-04 02:32:08] 2026-05-04 00:31:37,119 | INFO     | will attempt to kill all subprocesses of pid=30133
[2026-05-04 02:32:08] 2026-05-04 00:31:37,149 | INFO     | process IDs to be killed: [30133] (in reverse order)
[2026-05-04 02:32:08] 2026-05-04 00:31:37,174 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 02:32:08] 2026-05-04 00:31:37,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 02:32:08] 2026-05-04 00:31:37,175 | INFO     | did not find any defunct processes belonging to 30133
[2026-05-04 02:32:08] 2026-05-04 00:31:37,176 | INFO     | did not find any defunct processes belonging to 30133
[2026-05-04 02:32:08] 2026-05-04 00:31:37,176 | INFO     | Ready for new job
[2026-05-04 02:32:08] 2026-05-04 00:31:37,177 | INFO     | ***************************************
[2026-05-04 02:32:08] 2026-05-04 00:31:37,177 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 02:32:08] 2026-05-04 00:31:37,177 | INFO     | ***************************************
[2026-05-04 02:32:08] 2026-05-04 00:31:37,177 | INFO     | 
[2026-05-04 02:32:08] 2026-05-04 00:31:37,177 | INFO     | architecture information:
[2026-05-04 02:32:08] 2026-05-04 00:31:37,178 | INFO     | executing command: cat /etc/os-release
[2026-05-04 02:32:08] 2026-05-04 00:31:37,187 | INFO     | cat /etc/os-release:
[2026-05-04 02:32:08] NAME="CentOS Linux"
[2026-05-04 02:32:08] VERSION="7 (Core)"
[2026-05-04 02:32:08] ID="centos"
[2026-05-04 02:32:08] ID_LIKE="rhel fedora"
[2026-05-04 02:32:08] VERSION_ID="7"
[2026-05-04 02:32:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 02:32:08] ANSI_COLOR="0;31"
[2026-05-04 02:32:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 02:32:08] HOME_URL="https://www.centos.org/"
[2026-05-04 02:32:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 02:32:08] 
[2026-05-04 02:32:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 02:32:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 02:32:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 02:32:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 02:32:08] 
[2026-05-04 02:32:08] 2026-05-04 00:31:37,187 | INFO     | ***************************************
[2026-05-04 02:32:08] 2026-05-04 00:31:37,690 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-05-04 02:32:08] 2026-05-04 00:31:37,703 | INFO     | sufficient remaining disk space (378834780160 B)
[2026-05-04 02:32:08] 2026-05-04 00:31:37,704 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 02:32:08] 2026-05-04 00:31:37,704 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 02:32:08] 2026-05-04 00:31:37,704 | INFO     | update_server=False
[2026-05-04 02:32:08] 2026-05-04 00:31:37,704 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 02:32:08] 2026-05-04 00:31:37,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 02:32:08] 2026-05-04 00:31:37,914 | INFO     | all data control threads have been joined
[2026-05-04 02:32:08] 2026-05-04 00:31:37,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 02:32:08] 2026-05-04 00:31:38,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 02:32:08] 2026-05-04 00:31:38,261 | INFO     | aborting loop
[2026-05-04 02:32:08] 2026-05-04 00:31:38,529 | INFO     | all job control threads have been joined
[2026-05-04 02:32:08] 2026-05-04 00:31:38,709 | INFO     | [job] queue monitor thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:38,710 | INFO     | [job] retrieve thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:38,904 | INFO     | all payload control threads have been joined
[2026-05-04 02:32:08] 2026-05-04 00:31:38,920 | INFO     | [data] control thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:38,964 | INFO     | [payload] failed_post thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:39,154 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:39,262 | INFO     | [job] job monitor thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:39,415 | INFO     | [job] validate thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:39,465 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:39,535 | INFO     | [job] control thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:39,586 | INFO     | [payload] validate_post thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:39,590 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:39,661 | INFO     | [data] copytool_in thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:39,910 | INFO     | [payload] control thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:39,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 02:32:08] 2026-05-04 00:31:39,976 | INFO     | [data] copytool_out thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:43,978 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:48,352 | INFO     | job.realtimelogging is not enabled
[2026-05-04 02:32:08] 2026-05-04 00:31:49,357 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 02:32:08] 2026-05-04 00:31:52,068 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-05-04 02:32:08] 2026-05-04 00:32:01,046 | INFO     | [monitor] cgroup control has ended
[2026-05-04 02:32:08] 2026-05-04 00:32:02,621 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300915107648)>', '<ExcThread(monitor, started 140300567684864)>']
[2026-05-04 02:32:08] 2026-05-04 00:32:07,646 | INFO     | all workflow threads have been joined
[2026-05-04 02:32:08] 2026-05-04 00:32:07,647 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 02:32:08] 2026-05-04 00:32:07,647 | INFO     | traces error code: 0
[2026-05-04 02:32:08] 2026-05-04 00:32:07,647 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 02:32:08] 2026-05-04 00:32:08,774 | INFO     | PID=25702 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-04 02:32:08] 2026-05-04 00:32:08,774 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 02:32:08] 2026-05-04 00:32:08,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 02:32:08] 2026-05-04 00:32:08,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 02:32:08] 2026-05-04 00:32:08,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 02:32:08] 2026-05-04 00:32:08,774 | INFO     | [monitor] control thread has ended
[2026-05-04 02:32:08] 2026-05-04 00:32:08,820 [wrapper] ==== pilot stdout END ====
[2026-05-04 02:32:08] 2026-05-04 00:32:08,823 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 02:32:08] 2026-05-04 00:32:08,825 [wrapper] pilotpid: 25702
[2026-05-04 02:32:08] 2026-05-04 00:32:08,828 [wrapper] Pilot exit status: 0
[2026-05-04 02:32:08] 2026-05-04 00:32:08,835 [wrapper] pandaids: 7128144415
[2026-05-04 02:32:08] 2026-05-04 00:32:08,851 [wrapper] cleanup supervisor_pilot   35667 25703
[2026-05-04 02:32:08] 2026-05-04 00:32:08,854 [wrapper] Test setup, not cleaning
[2026-05-04 02:32:08] 2026-05-04 00:32:08,856 [wrapper] apfmon messages muted
[2026-05-04 02:32:08] 2026-05-04 00:32:08,859 [wrapper] ==== wrapper stdout END ====
[2026-05-04 02:32:08] 2026-05-04 00:32:08,861 [wrapper] ==== wrapper stderr END ====
[2026-05-04 02:32:08]  *** Error codes and diagnostics ***
[2026-05-04 02:32:08]     "exeErrorCode": 0,
[2026-05-04 02:32:08]     "pilotErrorCode": 0,
[2026-05-04 02:32:08]  *** Listing of results directory ***
[2026-05-04 02:32:08] total 405068
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc    683926 May  3 23:31 pilot3.tar.gz
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc      5631 May  3 23:58 queuedata.json
[2026-05-04 02:32:08] -rwx------ 1 boinc boinc     36322 May  3 23:58 runpilot2-wrapper.sh
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc       100 May  4 01:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 02:32:08] -rwxr-xr-x 1 boinc boinc      7986 May  4 01:16 run_atlas
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc       105 May  4 01:16 job.xml
[2026-05-04 02:32:08] -rw-r--r-- 2 boinc boinc 242904857 May  4 01:16 EVNT.50011119._000042.pool.root.1
[2026-05-04 02:32:08] -rw-r--r-- 2 boinc boinc    697408 May  4 01:16 input.tar.gz
[2026-05-04 02:32:08] -rw-r--r-- 2 boinc boinc     15667 May  4 01:16 start_atlas.sh
[2026-05-04 02:32:08] drwxrwx--x 2 boinc boinc      4096 May  4 01:16 shared
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc         0 May  4 01:16 boinc_setup_complete
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc      6363 May  4 01:16 init_data.xml
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc         0 May  4 01:16 boinc_lockfile
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc      2561 May  4 01:16 pandaJob.out
[2026-05-04 02:32:08] -rw------- 1 boinc boinc   1003017 May  4 01:16 agis_schedconf.cvmfs.json
[2026-05-04 02:32:08] -rw------- 1 boinc boinc   1508687 May  4 01:16 agis_ddmendpoints.agis.ALL.json
[2026-05-04 02:32:08] -rw------- 1 boinc boinc       418 May  4 01:16 workernode_map.json
[2026-05-04 02:32:08] drwx------ 5 boinc boinc      4096 May  4 01:16 pilot3
[2026-05-04 02:32:08] -rw------- 1 boinc boinc        95 May  4 02:31 pilot_heartbeat.json
[2026-05-04 02:32:08] -rw------- 1 boinc boinc 166410557 May  4 02:31 HITS.50011124._001041.pool.root.1
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc       487 May  4 02:31 boinc_task_state.xml
[2026-05-04 02:32:08] -rw------- 1 boinc boinc      1015 May  4 02:31 memory_monitor_summary.json
[2026-05-04 02:32:08] -rw------- 1 boinc boinc    226431 May  4 02:31 log.50011124._001041.job.log.tgz.1
[2026-05-04 02:32:08] -rw------- 1 boinc boinc      6307 May  4 02:31 heartbeat_new.json
[2026-05-04 02:32:08] -rw------- 1 boinc boinc      6198 May  4 02:31 heartbeat.json
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc        27 May  4 02:31 wrapper_checkpoint.txt
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc      8192 May  4 02:31 boinc_mmap_file
[2026-05-04 02:32:08] -rw------- 1 boinc boinc       745 May  4 02:32 pilotlog.txt
[2026-05-04 02:32:08] -rw------- 1 boinc boinc    443527 May  4 02:32 log.50011124._001041.job.log.1
[2026-05-04 02:32:08] -rw------- 1 boinc boinc       357 May  4 02:32 output.list
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc       410 May  4 02:32 runtime_log
[2026-05-04 02:32:08] -rw------- 1 boinc boinc    686080 May  4 02:32 result.tar.gz
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc      8534 May  4 02:32 runtime_log.err
[2026-05-04 02:32:08] -rw------- 1 boinc boinc       660 May  4 02:32 c5170dfb416d.diag
[2026-05-04 02:32:08] -rw-r--r-- 1 boinc boinc     22124 May  4 02:32 stderr.txt
[2026-05-04 02:32:08] HITS file was successfully produced:
[2026-05-04 02:32:08] -rw------- 1 boinc boinc 166410557 May  4 02:31 shared/HITS.pool.root.1
[2026-05-04 02:32:08]  *** Contents of shared directory: ***
[2026-05-04 02:32:08] total 401104
[2026-05-04 02:32:08] -rw-r--r-- 2 boinc boinc 242904857 May  4 01:16 ATLAS.root_0
[2026-05-04 02:32:08] -rw-r--r-- 2 boinc boinc    697408 May  4 01:16 input.tar.gz
[2026-05-04 02:32:08] -rw-r--r-- 2 boinc boinc     15667 May  4 01:16 start_atlas.sh
[2026-05-04 02:32:08] -rw------- 1 boinc boinc 166410557 May  4 02:31 HITS.pool.root.1
[2026-05-04 02:32:08] -rw------- 1 boinc boinc    686080 May  4 02:32 result.tar.gz
02:32:33 (21657): run_atlas exited; CPU time 12123.330688
02:32:33 (21657): called boinc_finish(0)

</stderr_txt>
]]>

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