Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:36:06 (1102859): wrapper (7.7.26015): starting
23:36:06 (1102859): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 23:36:06] Arguments: --nthreads 4
[2026-05-04 23:36:06] Threads: 4
[2026-05-04 23:36:06] Checking for CVMFS
[2026-05-04 23:36:06] No cvmfs_config command found, will try listing directly
[2026-05-04 23:36:06] CVMFS is ok
[2026-05-04 23:36:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 23:36:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 23:36:06] Further information can be found at the LHC@home message board.
[2026-05-04 23:36:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 23:36:06] Checking for apptainer binary...
[2026-05-04 23:36:06] which: no apptainer in ((null))
[2026-05-04 23:36:06] apptainer is not installed, using version from CVMFS
[2026-05-04 23:36:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 23:36:07] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-04 23:36:07] apptainer works
[2026-05-04 23:36:07] Set ATHENA_PROC_NUMBER=4
[2026-05-04 23:36:07] Set ATHENA_CORE_NUMBER=4
[2026-05-04 23:36:07] Starting ATLAS job with PandaID=7119983126
[2026-05-04 23:36:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-05 03:02:07]  *** The last 200 lines of the pilot log: ***
[2026-05-05 03:02:07] 2026-05-05 01:01:29,371 | INFO     | preparing for final server update for job 7119983126 in state='finished'
[2026-05-05 03:02:07] 2026-05-05 01:01:29,371 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/0/PanDA_Pilot-7119983126/jobReport.json
[2026-05-05 03:02:07] 2026-05-05 01:01:29,373 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/0/workernode_map.json
[2026-05-05 03:02:07] 2026-05-05 01:01:29,374 | INFO     | this job has now completed (state=finished)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,374 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,374 | INFO     | log transfer has been attempted: DONE
[2026-05-05 03:02:07] 2026-05-05 01:01:29,374 | INFO     | job 7119983126 has finished - writing final server update
[2026-05-05 03:02:07] 2026-05-05 01:01:29,377 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_888092/.job.ad'
[2026-05-05 03:02:07] 2026-05-05 01:01:29,377 | INFO     | total number of processed events: 400 (read)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,390 | INFO     | using path: /var/lib/boinc/var/slot56/slots/0/PanDA_Pilot-7119983126/memory_monitor_summary.json (trf name=prmon)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,391 | INFO     | extracted standard info from prmon json
[2026-05-05 03:02:07] 2026-05-05 01:01:29,391 | INFO     | extracted standard memory fields from prmon json
[2026-05-05 03:02:07] 2026-05-05 01:01:29,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-05 03:02:07] 2026-05-05 01:01:29,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-05 03:02:07] 2026-05-05 01:01:29,397 | INFO     | fitting pss+swap vs Time
[2026-05-05 03:02:07] 2026-05-05 01:01:29,398 | INFO     | sum of square deviations: 2518000700.0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,399 | INFO     | sum of deviations: 25973001753.999996
[2026-05-05 03:02:07] 2026-05-05 01:01:29,399 | INFO     | mean x (centered): 0.0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,400 | INFO     | mean y: 2315290.0995024876
[2026-05-05 03:02:07] 2026-05-05 01:01:29,401 | INFO     | intersect: 2315290.0995024876
[2026-05-05 03:02:07] 2026-05-05 01:01:29,402 | INFO     | chi2: 1.4525755170605124
[2026-05-05 03:02:07] 2026-05-05 01:01:29,403 | INFO     | sum of square deviations: 2334722845.0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,405 | INFO     | sum of deviations: 25184488822.5
[2026-05-05 03:02:07] 2026-05-05 01:01:29,405 | INFO     | mean x (centered): 0.0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,405 | INFO     | mean y: 2314633.7704081633
[2026-05-05 03:02:07] 2026-05-05 01:01:29,405 | INFO     | intersect: 2314633.7704081633
[2026-05-05 03:02:07] 2026-05-05 01:01:29,405 | INFO     | chi2: 1.4535104089707265
[2026-05-05 03:02:07] 2026-05-05 01:01:29,406 | INFO     | current chi2=1.4535104089707265 (change=-0.0643609849700622 %)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,406 | INFO     | right removable region: 195
[2026-05-05 03:02:07] 2026-05-05 01:01:29,406 | INFO     | sum of square deviations: 2334722845.0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,408 | INFO     | sum of deviations: -2015839122.9999995
[2026-05-05 03:02:07] 2026-05-05 01:01:29,408 | INFO     | mean x (centered): 0.0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,409 | INFO     | mean y: 2338303.8469387754
[2026-05-05 03:02:07] 2026-05-05 01:01:29,409 | INFO     | intersect: 2338303.8469387754
[2026-05-05 03:02:07] 2026-05-05 01:01:29,409 | INFO     | chi2: 0.01596499499155266
[2026-05-05 03:02:07] 2026-05-05 01:01:29,410 | INFO     | current chi2=0.01596499499155266 (change=98.90091807248274 %)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,410 | INFO     | sum of square deviations: 2160561440.0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,411 | INFO     | sum of deviations: -1788126183.9999998
[2026-05-05 03:02:07] 2026-05-05 01:01:29,411 | INFO     | mean x (centered): 0.0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,412 | INFO     | mean y: 2338087.1937172776
[2026-05-05 03:02:07] 2026-05-05 01:01:29,412 | INFO     | intersect: 2338087.1937172776
[2026-05-05 03:02:07] 2026-05-05 01:01:29,412 | INFO     | chi2: 0.013013184656924826
[2026-05-05 03:02:07] 2026-05-05 01:01:29,412 | INFO     | current chi2=0.013013184656924826 (change=18.489265647685354 %)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,412 | INFO     | left removable region: 10
[2026-05-05 03:02:07] 2026-05-05 01:01:29,413 | INFO     | sum of square deviations: 1963274020.0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,414 | INFO     | sum of deviations: -1891555404.9999998
[2026-05-05 03:02:07] 2026-05-05 01:01:29,414 | INFO     | mean x (centered): 0.0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,414 | INFO     | mean y: 2337991.0864864867
[2026-05-05 03:02:07] 2026-05-05 01:01:29,414 | INFO     | intersect: 2337991.0864864867
[2026-05-05 03:02:07] 2026-05-05 01:01:29,414 | INFO     | chi2: 0.012937120460978644
[2026-05-05 03:02:07] 2026-05-05 01:01:29,414 | INFO     | current memory leak: -0.96 B/s (using 185 data points, chi2=0.01)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,415 | INFO     | could have reported an average CPU frequency of 2494 MHz (10 samples)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,415 | INFO     | ..............................
[2026-05-05 03:02:07] 2026-05-05 01:01:29,415 | INFO     | . Timing measurements:
[2026-05-05 03:02:07] 2026-05-05 01:01:29,415 | INFO     | . get job = 0 s
[2026-05-05 03:02:07] 2026-05-05 01:01:29,415 | INFO     | . initial setup = 10 s
[2026-05-05 03:02:07] 2026-05-05 01:01:29,416 | INFO     | . payload setup = 16 s
[2026-05-05 03:02:07] 2026-05-05 01:01:29,416 | INFO     | . stage-in = 0 s
[2026-05-05 03:02:07] 2026-05-05 01:01:29,416 | INFO     | . payload execution = 12263 s
[2026-05-05 03:02:07] 2026-05-05 01:01:29,416 | INFO     | . stage-out = 1 s
[2026-05-05 03:02:07] 2026-05-05 01:01:29,416 | INFO     | . log creation = 0 s
[2026-05-05 03:02:07] 2026-05-05 01:01:29,416 | INFO     | ..............................
[2026-05-05 03:02:07] 2026-05-05 01:01:29,510 | INFO     | 
[2026-05-05 03:02:07] 2026-05-05 01:01:29,510 | INFO     | job summary report
[2026-05-05 03:02:07] 2026-05-05 01:01:29,510 | INFO     | --------------------------------------------------
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | PanDA job id: 7119983126
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | task id: 49718416
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | errors: (none)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | pilot state: finished 
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | transexitcode: 0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | exeerrorcode: 0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | exeerrordiag: 
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | exitcode: 0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | exitmsg: OK
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | cpuconsumptiontime: 44673 s
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | nevents: 400
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | neventsw: 0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,511 | INFO     | pid: 1111841
[2026-05-05 03:02:07] 2026-05-05 01:01:29,512 | INFO     | pgrp: 1111841
[2026-05-05 03:02:07] 2026-05-05 01:01:29,512 | INFO     | corecount: 4
[2026-05-05 03:02:07] 2026-05-05 01:01:29,512 | INFO     | event service: False
[2026-05-05 03:02:07] 2026-05-05 01:01:29,512 | INFO     | sizes: {0: 2270418, 1: 2272247, 2: 2272247, 12282: 2301721, 12285: 2310797, 12287: 2310935}
[2026-05-05 03:02:07] 2026-05-05 01:01:29,512 | INFO     | --------------------------------------------------
[2026-05-05 03:02:07] 2026-05-05 01:01:29,512 | INFO     | 
[2026-05-05 03:02:07] 2026-05-05 01:01:29,512 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/0
[2026-05-05 03:02:07] 2026-05-05 01:01:29,541 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,541 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,541 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,541 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,542 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,543 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-05 03:02:07] 2026-05-05 01:01:29,543 | INFO     | job 7119983126 has completed (purged errors)
[2026-05-05 03:02:07] 2026-05-05 01:01:29,543 | INFO     | overall cleanup function is called
[2026-05-05 03:02:07] 2026-05-05 01:01:30,049 | INFO     | PID=1107013 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-05 03:02:07] 2026-05-05 01:01:30,050 | INFO     | .. there are 13 such processes running
[2026-05-05 03:02:07] 2026-05-05 01:01:30,551 | INFO     | --- collectZombieJob: --- 10, [1111841]
[2026-05-05 03:02:07] 2026-05-05 01:01:30,552 | INFO     | zombie collector waiting for pid 1111841
[2026-05-05 03:02:07] 2026-05-05 01:01:30,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-05 03:02:07] 2026-05-05 01:01:30,552 | INFO     | collected zombie processes
[2026-05-05 03:02:07] 2026-05-05 01:01:30,552 | INFO     | will attempt to kill all subprocesses of pid=1111841
[2026-05-05 03:02:07] 2026-05-05 01:01:30,877 | INFO     | process IDs to be killed: [1111841] (in reverse order)
[2026-05-05 03:02:07] 2026-05-05 01:01:31,021 | WARNING  | found no corresponding commands to process id(s)
[2026-05-05 03:02:07] 2026-05-05 01:01:31,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-05 03:02:07] 2026-05-05 01:01:31,034 | INFO     | did not find any defunct processes belonging to 1111841
[2026-05-05 03:02:07] 2026-05-05 01:01:31,047 | INFO     | did not find any defunct processes belonging to 1111841
[2026-05-05 03:02:07] 2026-05-05 01:01:31,047 | INFO     | Ready for new job
[2026-05-05 03:02:07] 2026-05-05 01:01:31,049 | INFO     | ***************************************
[2026-05-05 03:02:07] 2026-05-05 01:01:31,049 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-05 03:02:07] 2026-05-05 01:01:31,049 | INFO     | ***************************************
[2026-05-05 03:02:07] 2026-05-05 01:01:31,050 | INFO     | 
[2026-05-05 03:02:07] 2026-05-05 01:01:31,054 | INFO     | architecture information:
[2026-05-05 03:02:07] 2026-05-05 01:01:31,054 | INFO     | executing command: cat /etc/os-release
[2026-05-05 03:02:07] 2026-05-05 01:01:31,077 | INFO     | cat /etc/os-release:
[2026-05-05 03:02:07] NAME="CentOS Linux"
[2026-05-05 03:02:07] VERSION="7 (Core)"
[2026-05-05 03:02:07] ID="centos"
[2026-05-05 03:02:07] ID_LIKE="rhel fedora"
[2026-05-05 03:02:07] VERSION_ID="7"
[2026-05-05 03:02:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-05 03:02:07] ANSI_COLOR="0;31"
[2026-05-05 03:02:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-05 03:02:07] HOME_URL="https://www.centos.org/"
[2026-05-05 03:02:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-05 03:02:07] 
[2026-05-05 03:02:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-05 03:02:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-05 03:02:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-05 03:02:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-05 03:02:07] 
[2026-05-05 03:02:07] 2026-05-05 01:01:31,077 | INFO     | ***************************************
[2026-05-05 03:02:07] 2026-05-05 01:01:31,580 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/0
[2026-05-05 03:02:07] 2026-05-05 01:01:31,610 | INFO     | sufficient remaining disk space (35622223872 B)
[2026-05-05 03:02:07] 2026-05-05 01:01:31,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-05 03:02:07] 2026-05-05 01:01:31,610 | INFO     | current server update state: UPDATING_FINAL
[2026-05-05 03:02:07] 2026-05-05 01:01:31,611 | INFO     | update_server=False
[2026-05-05 03:02:07] 2026-05-05 01:01:31,611 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-05 03:02:07] 2026-05-05 01:01:31,649 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-05 03:02:07] 2026-05-05 01:01:31,650 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-05 03:02:07] 2026-05-05 01:01:31,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-05 03:02:07] 2026-05-05 01:01:31,650 | INFO     | will abort loop
[2026-05-05 03:02:07] 2026-05-05 01:01:31,690 | INFO     | all data control threads have been joined
[2026-05-05 03:02:07] 2026-05-05 01:01:31,695 | INFO     | all job control threads have been joined
[2026-05-05 03:02:07] 2026-05-05 01:01:31,987 | INFO     | all payload control threads have been joined
[2026-05-05 03:02:07] 2026-05-05 01:01:32,246 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-05 03:02:07] 2026-05-05 01:01:32,615 | INFO     | [job] retrieve thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:32,654 | INFO     | [job] job monitor thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:32,695 | INFO     | [data] control thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:32,700 | INFO     | [job] control thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:32,775 | INFO     | [payload] execute_payloads thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:32,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-05 03:02:07] 2026-05-05 01:01:32,992 | INFO     | [payload] control thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:33,408 | INFO     | [job] create_data_payload thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:33,439 | INFO     | [job] validate thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:33,471 | INFO     | [payload] validate_post thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:33,555 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:33,664 | INFO     | [data] copytool_in thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:33,758 | INFO     | [payload] validate_pre thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:33,968 | INFO     | [payload] failed_post thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:34,255 | INFO     | [data] copytool_out thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:34,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-05 03:02:07] 2026-05-05 01:01:35,525 | INFO     | [job] queue monitor thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:01:36,847 | INFO     | [data] queue_monitor thread has finished
[2026-05-05 03:02:07] 2026-05-05 01:02:00,397 | INFO     | [monitor] cgroup control has ended
[2026-05-05 03:02:07] 2026-05-05 01:02:02,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23225849435968)>', '<ExcThread(monitor, started 23225545230080)>']
[2026-05-05 03:02:07] 2026-05-05 01:02:02,703 | INFO     | PID=1107013 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-05 03:02:07] 2026-05-05 01:02:02,704 | INFO     | .. there are 13 such processes running
[2026-05-05 03:02:07] 2026-05-05 01:02:02,705 | INFO     | found 0 job(s) in 20 queues
[2026-05-05 03:02:07] 2026-05-05 01:02:02,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-05 03:02:07] 2026-05-05 01:02:02,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-05 03:02:07] 2026-05-05 01:02:02,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-05 03:02:07] 2026-05-05 01:02:02,705 | INFO     | [monitor] control thread has ended
[2026-05-05 03:02:07] 2026-05-05 01:02:07,142 | INFO     | all workflow threads have been joined
[2026-05-05 03:02:07] 2026-05-05 01:02:07,143 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-05 03:02:07] 2026-05-05 01:02:07,143 | INFO     | traces error code: 0
[2026-05-05 03:02:07] 2026-05-05 01:02:07,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-05 03:02:07] 2026-05-05 01:02:07,358 [wrapper] ==== pilot stdout END ====
[2026-05-05 03:02:07] 2026-05-05 01:02:07,360 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-05 03:02:07] 2026-05-05 01:02:07,365 [wrapper] pilotpid: 1107013
[2026-05-05 03:02:07] 2026-05-05 01:02:07,380 [wrapper] Pilot exit status: 0
[2026-05-05 03:02:07] 2026-05-05 01:02:07,422 [wrapper] pandaids: 7119983126
[2026-05-05 03:02:07] 2026-05-05 01:02:07,503 [wrapper] cleanup supervisor_pilot 1389136 1107014
[2026-05-05 03:02:07] 2026-05-05 01:02:07,510 [wrapper] Test setup, not cleaning
[2026-05-05 03:02:07] 2026-05-05 01:02:07,513 [wrapper] apfmon messages muted
[2026-05-05 03:02:07] 2026-05-05 01:02:07,520 [wrapper] ==== wrapper stdout END ====
[2026-05-05 03:02:07] 2026-05-05 01:02:07,535 [wrapper] ==== wrapper stderr END ====
[2026-05-05 03:02:07]  *** Error codes and diagnostics ***
[2026-05-05 03:02:07]     "exeErrorCode": 0,
[2026-05-05 03:02:07]     "pilotErrorCode": 0,
[2026-05-05 03:02:07]  *** Listing of results directory ***
[2026-05-05 03:02:07] total 630976
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc    683926 May  1 10:43 pilot3.tar.gz
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc      5631 May  1 10:45 queuedata.json
[2026-05-05 03:02:07] -rwx------. 1 boinc boinc     36322 May  1 10:45 runpilot2-wrapper.sh
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc       100 May  4 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-05 03:02:07] -rwxr-xr-x. 1 boinc boinc      7986 May  4 23:36 run_atlas
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc       105 May  4 23:36 job.xml
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc      6482 May  4 23:36 init_data.xml
[2026-05-05 03:02:07] -rw-r--r--. 2 boinc boinc 448146517 May  4 23:36 EVNT.46373187._000064.pool.root.1
[2026-05-05 03:02:07] -rw-r--r--. 2 boinc boinc     15667 May  4 23:36 start_atlas.sh
[2026-05-05 03:02:07] drwxrwx--x. 2 boinc boinc      4096 May  4 23:36 shared
[2026-05-05 03:02:07] -rw-r--r--. 2 boinc boinc    697429 May  4 23:36 input.tar.gz
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc         0 May  4 23:36 boinc_lockfile
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc      2596 May  4 23:36 pandaJob.out
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc   1002597 May  4 23:36 agis_schedconf.cvmfs.json
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc       452 May  4 23:36 workernode_map.json
[2026-05-05 03:02:07] drwx------. 5 boinc boinc      4096 May  4 23:36 pilot3
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc 190842113 May  5 03:00 HITS.49718416._014355.pool.root.1
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc       490 May  5 03:01 boinc_task_state.xml
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc      1033 May  5 03:01 memory_monitor_summary.json
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc   1505918 May  5 03:01 agis_ddmendpoints.agis.ALL.json
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc    359367 May  5 03:01 log.49718416._014355.job.log.tgz.1
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc      6427 May  5 03:01 heartbeat_new.json
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc      6318 May  5 03:01 heartbeat.json
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc        95 May  5 03:02 pilot_heartbeat.json
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc        28 May  5 03:02 wrapper_checkpoint.txt
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc      5018 May  5 03:02 pilotlog.txt
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc   1139237 May  5 03:02 log.49718416._014355.job.log.1
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc      8192 May  5 03:02 boinc_mmap_file
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc       357 May  5 03:02 output.list
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc       410 May  5 03:02 runtime_log
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc   1515520 May  5 03:02 result.tar.gz
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc      8828 May  5 03:02 runtime_log.err
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc       665 May  5 03:02 682233ac71ec.diag
[2026-05-05 03:02:07] -rw-r--r--. 1 boinc boinc     21170 May  5 03:02 stderr.txt
[2026-05-05 03:02:07] HITS file was successfully produced:
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc 190842113 May  5 03:00 shared/HITS.pool.root.1
[2026-05-05 03:02:07]  *** Contents of shared directory: ***
[2026-05-05 03:02:07] total 626204
[2026-05-05 03:02:07] -rw-r--r--. 2 boinc boinc 448146517 May  4 23:36 ATLAS.root_0
[2026-05-05 03:02:07] -rw-r--r--. 2 boinc boinc     15667 May  4 23:36 start_atlas.sh
[2026-05-05 03:02:07] -rw-r--r--. 2 boinc boinc    697429 May  4 23:36 input.tar.gz
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc 190842113 May  5 03:00 HITS.pool.root.1
[2026-05-05 03:02:07] -rw-------. 1 boinc boinc   1515520 May  5 03:02 result.tar.gz
03:02:08 (1102859): run_atlas exited; CPU time 45115.529635
03:02:08 (1102859): called boinc_finish(0)

</stderr_txt>
]]>

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