Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:09:39 (1555530): wrapper (7.7.26015): starting
14:09:39 (1555530): wrapper: running run_atlas (--nthreads 11)
[2026-05-03 14:09:39] Arguments: --nthreads 11
[2026-05-03 14:09:39] Threads: 11
[2026-05-03 14:09:39] Checking for CVMFS
[2026-05-03 14:09:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-03 14:09:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-03 14:09:39] Running cvmfs_config stat atlas.cern.ch
[2026-05-03 14:09:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-03 14:09:40] 2.13.3.0 5853 4484 157008 159176 1 67 31161628 32935937 17652 16776704 0 18244435 99.545 23366488 36044 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-03 14:09:40] CVMFS is ok
[2026-05-03 14:09:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 14:09:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 14:09:40] Further information can be found at the LHC@home message board.
[2026-05-03 14:09:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 14:09:40] Checking for apptainer binary...
[2026-05-03 14:09:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-03 14:09:40] Running /usr/bin/apptainer --version
[2026-05-03 14:09:40] apptainer version 1.4.5-3.el9
[2026-05-03 14:09:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 14:09:40] c6-4-5-2.aglt2.org
[2026-05-03 14:09:40] apptainer works
[2026-05-03 14:09:40] Set ATHENA_PROC_NUMBER=11
[2026-05-03 14:09:40] Set ATHENA_CORE_NUMBER=11
[2026-05-03 14:09:40] Starting ATLAS job with PandaID=7127942729
[2026-05-03 14:09:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 15:40:41]  *** The last 200 lines of the pilot log: ***
[2026-05-03 15:40:41]  filesize=372070
[2026-05-03 15:40:41]  filetype=log
[2026-05-03 15:40:41]  guid=7c1dd708-6dbd-4e19-a023-911d4e2f7eeb
[2026-05-03 15:40:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-03 15:40:41]  is_altstaged=None
[2026-05-03 15:40:41]  is_tar=False
[2026-05-03 15:40:41]  lfn=log.50010691._000550.job.log.tgz.1
[2026-05-03 15:40:41]  mtime=0
[2026-05-03 15:40:41]  protocol_id=None
[2026-05-03 15:40:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-03 15:40:41]  replicas=None
[2026-05-03 15:40:41]  scope=mc23_13p6TeV
[2026-05-03 15:40:41]  status=None
[2026-05-03 15:40:41]  status_code=0
[2026-05-03 15:40:41]  storage_token=
[2026-05-03 15:40:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7127942729/log.50010691._000550.job.log.tgz.1
[2026-05-03 15:40:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/00/log.50010691._000550.job.log.tgz.1
[2026-05-03 15:40:41]  workdir=None
[2026-05-03 15:40:41] ]
[2026-05-03 15:40:41] 2026-05-03 19:40:04,077 | INFO     | transferring file log.50010691._000550.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7127942729/log.50010691._000550.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-05-03 15:40:41] 2026-05-03 19:40:04,077 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7127942729/log.50010691._000550.job.log.tgz.1 /tmp/boinchome/slots/0/log.50010691._000550.job
[2026-05-03 15:40:41] 2026-05-03 19:40:04,098 | INFO     | adding to output.list: log.50010691._000550.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/00/log.50010691._000550.job.log.tg
[2026-05-03 15:40:41] 2026-05-03 19:40:04,099 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-03 15:40:41] 2026-05-03 19:40:04,099 | INFO     | summary of transferred files:
[2026-05-03 15:40:41] 2026-05-03 19:40:04,099 | INFO     |  -- lfn=log.50010691._000550.job.log.tgz.1, status_code=0, status=transferred
[2026-05-03 15:40:41] 2026-05-03 19:40:04,099 | INFO     | stage-out finished correctly
[2026-05-03 15:40:41] 2026-05-03 19:40:05,067 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-03 15:40:41] 2026-05-03 19:40:07,344 | INFO     | job 7127942729 has state=finished
[2026-05-03 15:40:41] 2026-05-03 19:40:07,345 | INFO     | preparing for final server update for job 7127942729 in state='finished'
[2026-05-03 15:40:41] 2026-05-03 19:40:07,345 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7127942729/jobReport.json
[2026-05-03 15:40:41] 2026-05-03 19:40:07,348 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-05-03 15:40:41] 2026-05-03 19:40:07,348 | INFO     | this job has now completed (state=finished)
[2026-05-03 15:40:41] 2026-05-03 19:40:07,349 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 15:40:41] 2026-05-03 19:40:07,349 | INFO     | log transfer has been attempted: DONE
[2026-05-03 15:40:41] 2026-05-03 19:40:07,349 | INFO     | job 7127942729 has finished - writing final server update
[2026-05-03 15:40:41] 2026-05-03 19:40:07,349 | INFO     | total number of processed events: 400 (read)
[2026-05-03 15:40:41] 2026-05-03 19:40:07,362 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7127942729/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 15:40:41] 2026-05-03 19:40:07,363 | INFO     | extracted standard info from prmon json
[2026-05-03 15:40:41] 2026-05-03 19:40:07,363 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 15:40:41] 2026-05-03 19:40:07,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 15:40:41] 2026-05-03 19:40:07,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 15:40:41] 2026-05-03 19:40:07,366 | INFO     | fitting pss+swap vs Time
[2026-05-03 15:40:41] 2026-05-03 19:40:07,366 | INFO     | sum of square deviations: 164753334.02469143
[2026-05-03 15:40:41] 2026-05-03 19:40:07,367 | INFO     | sum of deviations: 1434527332.8024688
[2026-05-03 15:40:41] 2026-05-03 19:40:07,367 | INFO     | mean x (centered): 0.0
[2026-05-03 15:40:41] 2026-05-03 19:40:07,367 | INFO     | mean y: 2732689.827160494
[2026-05-03 15:40:41] 2026-05-03 19:40:07,367 | INFO     | intersect: 2732689.827160494
[2026-05-03 15:40:41] 2026-05-03 19:40:07,368 | INFO     | chi2: 0.1125280634580056
[2026-05-03 15:40:41] 2026-05-03 19:40:07,368 | INFO     | current memory leak: 8.71 B/s (using 81 data points, chi2=0.11)
[2026-05-03 15:40:41] 2026-05-03 19:40:07,368 | INFO     | could have reported an average CPU frequency of 2912 MHz (6 samples)
[2026-05-03 15:40:41] 2026-05-03 19:40:07,368 | INFO     | ..............................
[2026-05-03 15:40:41] 2026-05-03 19:40:07,368 | INFO     | . Timing measurements:
[2026-05-03 15:40:41] 2026-05-03 19:40:07,368 | INFO     | . get job = 0 s
[2026-05-03 15:40:41] 2026-05-03 19:40:07,369 | INFO     | . initial setup = 12 s
[2026-05-03 15:40:41] 2026-05-03 19:40:07,369 | INFO     | . payload setup = 18 s
[2026-05-03 15:40:41] 2026-05-03 19:40:07,369 | INFO     | . stage-in = 0 s
[2026-05-03 15:40:41] 2026-05-03 19:40:07,369 | INFO     | . payload execution = 5358 s
[2026-05-03 15:40:41] 2026-05-03 19:40:07,369 | INFO     | . stage-out = 0 s
[2026-05-03 15:40:41] 2026-05-03 19:40:07,369 | INFO     | . log creation = 0 s
[2026-05-03 15:40:41] 2026-05-03 19:40:07,369 | INFO     | ..............................
[2026-05-03 15:40:41] 2026-05-03 19:40:07,664 | INFO     | 
[2026-05-03 15:40:41] 2026-05-03 19:40:07,668 | INFO     | job summary report
[2026-05-03 15:40:41] 2026-05-03 19:40:07,668 | INFO     | --------------------------------------------------
[2026-05-03 15:40:41] 2026-05-03 19:40:07,668 | INFO     | PanDA job id: 7127942729
[2026-05-03 15:40:41] 2026-05-03 19:40:07,668 | INFO     | task id: 50010691
[2026-05-03 15:40:41] 2026-05-03 19:40:07,668 | INFO     | errors: (none)
[2026-05-03 15:40:41] 2026-05-03 19:40:07,668 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 15:40:41] 2026-05-03 19:40:07,668 | INFO     | pilot state: finished 
[2026-05-03 15:40:41] 2026-05-03 19:40:07,668 | INFO     | transexitcode: 0
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | exeerrorcode: 0
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | exeerrordiag: 
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | exitcode: 0
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | exitmsg: OK
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | cpuconsumptiontime: 32578 s
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | nevents: 400
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | neventsw: 0
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | pid: 1565787
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | pgrp: 1565787
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | corecount: 11
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | event service: False
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | sizes: {0: 2275301, 1: 2277130, 12: 2277130, 5381: 2312652, 5382: 2312652, 5385: 2312846}
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | --------------------------------------------------
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | 
[2026-05-03 15:40:41] 2026-05-03 19:40:07,669 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-03 15:40:41] 2026-05-03 19:40:07,695 | WARNING  | process 1565787 can no longer be monitored (due to stat problems) - aborting
[2026-05-03 15:40:41] 2026-05-03 19:40:07,695 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7127942729/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 15:40:41] 2026-05-03 19:40:07,722 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,724 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 15:40:41] 2026-05-03 19:40:07,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,724 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 15:40:41] 2026-05-03 19:40:07,724 | INFO     | job 7127942729 has completed (purged errors)
[2026-05-03 15:40:41] 2026-05-03 19:40:07,724 | INFO     | overall cleanup function is called
[2026-05-03 15:40:41] 2026-05-03 19:40:07,911 | INFO     | number of running child processes to parent process 1565787: 1
[2026-05-03 15:40:41] 2026-05-03 19:40:07,911 | INFO     | maximum number of monitored processes: 6
[2026-05-03 15:40:41] 2026-05-03 19:40:07,911 | INFO     | aborting job monitoring since job object (job id=7127942729) has expired
[2026-05-03 15:40:41] 2026-05-03 19:40:08,741 | INFO     | --- collectZombieJob: --- 10, [1565787]
[2026-05-03 15:40:41] 2026-05-03 19:40:08,741 | INFO     | zombie collector waiting for pid 1565787
[2026-05-03 15:40:41] 2026-05-03 19:40:08,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 15:40:41] 2026-05-03 19:40:08,741 | INFO     | collected zombie processes
[2026-05-03 15:40:41] 2026-05-03 19:40:08,742 | INFO     | will attempt to kill all subprocesses of pid=1565787
[2026-05-03 15:40:41] 2026-05-03 19:40:08,926 | INFO     | process IDs to be killed: [1565787] (in reverse order)
[2026-05-03 15:40:41] 2026-05-03 19:40:09,006 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 15:40:41] 2026-05-03 19:40:09,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 15:40:41] 2026-05-03 19:40:09,018 | INFO     | did not find any defunct processes belonging to 1565787
[2026-05-03 15:40:41] 2026-05-03 19:40:09,029 | INFO     | did not find any defunct processes belonging to 1565787
[2026-05-03 15:40:41] 2026-05-03 19:40:09,029 | INFO     | Ready for new job
[2026-05-03 15:40:41] 2026-05-03 19:40:09,031 | INFO     | ***************************************
[2026-05-03 15:40:41] 2026-05-03 19:40:09,031 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 15:40:41] 2026-05-03 19:40:09,031 | INFO     | ***************************************
[2026-05-03 15:40:41] 2026-05-03 19:40:09,031 | INFO     | 
[2026-05-03 15:40:41] 2026-05-03 19:40:09,034 | INFO     | architecture information:
[2026-05-03 15:40:41] 2026-05-03 19:40:09,034 | INFO     | executing command: cat /etc/os-release
[2026-05-03 15:40:41] 2026-05-03 19:40:09,051 | INFO     | cat /etc/os-release:
[2026-05-03 15:40:41] NAME="CentOS Linux"
[2026-05-03 15:40:41] VERSION="7 (Core)"
[2026-05-03 15:40:41] ID="centos"
[2026-05-03 15:40:41] ID_LIKE="rhel fedora"
[2026-05-03 15:40:41] VERSION_ID="7"
[2026-05-03 15:40:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 15:40:41] ANSI_COLOR="0;31"
[2026-05-03 15:40:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 15:40:41] HOME_URL="https://www.centos.org/"
[2026-05-03 15:40:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 15:40:41] 
[2026-05-03 15:40:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 15:40:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 15:40:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 15:40:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 15:40:41] 
[2026-05-03 15:40:41] 2026-05-03 19:40:09,051 | INFO     | ***************************************
[2026-05-03 15:40:41] 2026-05-03 19:40:09,554 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-03 15:40:41] 2026-05-03 19:40:09,569 | INFO     | sufficient remaining disk space (76468453376 B)
[2026-05-03 15:40:41] 2026-05-03 19:40:09,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 15:40:41] 2026-05-03 19:40:09,570 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 15:40:41] 2026-05-03 19:40:09,570 | INFO     | update_server=False
[2026-05-03 15:40:41] 2026-05-03 19:40:09,570 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 15:40:41] 2026-05-03 19:40:09,570 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 15:40:41] 2026-05-03 19:40:09,570 | INFO     | aborting loop
[2026-05-03 15:40:41] 2026-05-03 19:40:09,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 15:40:41] 2026-05-03 19:40:09,717 | INFO     | all data control threads have been joined
[2026-05-03 15:40:41] 2026-05-03 19:40:10,576 | INFO     | [job] retrieve thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:10,576 | INFO     | [job] job monitor thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:10,681 | INFO     | all payload control threads have been joined
[2026-05-03 15:40:41] 2026-05-03 19:40:10,689 | INFO     | [data] copytool_in thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:10,722 | INFO     | [data] control thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:10,772 | INFO     | [payload] validate_post thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:11,049 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:11,152 | INFO     | all job control threads have been joined
[2026-05-03 15:40:41] 2026-05-03 19:40:11,165 | INFO     | [job] validate thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:11,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 15:40:41] 2026-05-03 19:40:11,438 | INFO     | [payload] failed_post thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:11,518 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:11,686 | INFO     | [payload] control thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:11,698 | INFO     | [data] copytool_out thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:11,773 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:11,801 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:12,158 | INFO     | [job] control thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:12,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 15:40:41] 2026-05-03 19:40:13,498 | INFO     | [job] queue monitor thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:15,175 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 15:40:41] 2026-05-03 19:40:19,665 | INFO     | [monitor] cgroup control has ended
[2026-05-03 15:40:41] 2026-05-03 19:40:20,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674411747136)>', '<ExcThread(monitor, started 140674070476544)>']
[2026-05-03 15:40:41] 2026-05-03 19:40:25,697 | INFO     | all workflow threads have been joined
[2026-05-03 15:40:41] 2026-05-03 19:40:25,697 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 15:40:41] 2026-05-03 19:40:25,697 | INFO     | traces error code: 0
[2026-05-03 15:40:41] 2026-05-03 19:40:25,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 15:40:41] 2026-05-03 19:40:40,625 | INFO     | PID=1559228 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 15:40:41] 2026-05-03 19:40:40,626 | INFO     | .. there are 15 such processes running
[2026-05-03 15:40:41] 2026-05-03 19:40:40,627 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 15:40:41] 2026-05-03 19:40:40,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 15:40:41] 2026-05-03 19:40:40,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 15:40:41] 2026-05-03 19:40:40,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 15:40:41] 2026-05-03 19:40:40,628 | CRITICAL | thread 'MainThread' is not alive
[2026-05-03 15:40:41] 2026-05-03 19:40:40,628 | INFO     | [monitor] control thread has ended
[2026-05-03 15:40:41] 2026-05-03 19:40:40,801 [wrapper] ==== pilot stdout END ====
[2026-05-03 15:40:41] 2026-05-03 19:40:40,804 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 15:40:41] 2026-05-03 19:40:40,806 [wrapper] pilotpid: 1559228
[2026-05-03 15:40:41] 2026-05-03 19:40:40,809 [wrapper] Pilot exit status: 0
[2026-05-03 15:40:41] 2026-05-03 19:40:40,829 [wrapper] pandaids: 7127942729
[2026-05-03 15:40:41] 2026-05-03 19:40:40,887 [wrapper] cleanup supervisor_pilot 1843493 1559229
[2026-05-03 15:40:41] 2026-05-03 19:40:40,901 [wrapper] Test setup, not cleaning
[2026-05-03 15:40:41] 2026-05-03 19:40:40,914 [wrapper] apfmon messages muted
[2026-05-03 15:40:41] 2026-05-03 19:40:40,921 [wrapper] ==== wrapper stdout END ====
[2026-05-03 15:40:41] 2026-05-03 19:40:40,924 [wrapper] ==== wrapper stderr END ====
[2026-05-03 15:40:41]  *** Error codes and diagnostics ***
[2026-05-03 15:40:41]     "exeErrorCode": 0,
[2026-05-03 15:40:41]     "pilotErrorCode": 0,
[2026-05-03 15:40:41]  *** Listing of results directory ***
[2026-05-03 15:40:41] total 405188
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas    683926 May  3 13:29 pilot3.tar.gz
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas      5631 May  3 14:06 queuedata.json
[2026-05-03 15:40:41] -rwx------. 1 boincer umatlas     36322 May  3 14:07 runpilot2-wrapper.sh
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas       100 May  3 14:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 15:40:41] -rwxr-xr-x. 1 boincer umatlas      7986 May  3 14:09 run_atlas
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas       105 May  3 14:09 job.xml
[2026-05-03 15:40:41] -rw-r--r--. 2 boincer umatlas 246917558 May  3 14:09 EVNT.50010689._000022.pool.root.1
[2026-05-03 15:40:41] -rw-r--r--. 2 boincer umatlas     15667 May  3 14:09 start_atlas.sh
[2026-05-03 15:40:41] drwxrwx--x. 2 boincer umatlas      4096 May  3 14:09 shared
[2026-05-03 15:40:41] -rw-r--r--. 2 boincer umatlas    697402 May  3 14:09 input.tar.gz
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas         0 May  3 14:09 boinc_lockfile
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas      2548 May  3 14:09 pandaJob.out
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas        57 May  3 14:09 setup.sh.local
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas   1002987 May  3 14:09 agis_schedconf.cvmfs.json
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas   1508687 May  3 14:10 agis_ddmendpoints.agis.ALL.json
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas       441 May  3 14:10 workernode_map.json
[2026-05-03 15:40:41] drwx------. 5 boincer umatlas      4096 May  3 14:10 pilot3
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas      6768 May  3 15:29 init_data.xml
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas 162093818 May  3 15:39 HITS.50010691._000550.pool.root.1
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas       487 May  3 15:39 boinc_task_state.xml
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas      1037 May  3 15:40 memory_monitor_summary.json
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas    372070 May  3 15:40 log.50010691._000550.job.log.tgz.1
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas      6398 May  3 15:40 heartbeat_new.json
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas      6289 May  3 15:40 heartbeat.json
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas      8192 May  3 15:40 boinc_mmap_file
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas        27 May  3 15:40 wrapper_checkpoint.txt
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas       893 May  3 15:40 pilotlog.txt
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas        95 May  3 15:40 pilot_heartbeat.json
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas    512710 May  3 15:40 log.50010691._000550.job.log.1
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas       357 May  3 15:40 output.list
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas       410 May  3 15:40 runtime_log
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas    901120 May  3 15:40 result.tar.gz
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas      8966 May  3 15:40 runtime_log.err
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas       653 May  3 15:40 8efbfb975a46.diag
[2026-05-03 15:40:41] -rw-r--r--. 1 boincer umatlas     21160 May  3 15:40 stderr.txt
[2026-05-03 15:40:41] HITS file was successfully produced:
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas 162093818 May  3 15:39 shared/HITS.pool.root.1
[2026-05-03 15:40:41]  *** Contents of shared directory: ***
[2026-05-03 15:40:41] total 401012
[2026-05-03 15:40:41] -rw-r--r--. 2 boincer umatlas 246917558 May  3 14:09 ATLAS.root_0
[2026-05-03 15:40:41] -rw-r--r--. 2 boincer umatlas     15667 May  3 14:09 start_atlas.sh
[2026-05-03 15:40:41] -rw-r--r--. 2 boincer umatlas    697402 May  3 14:09 input.tar.gz
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas 162093818 May  3 15:39 HITS.pool.root.1
[2026-05-03 15:40:41] -rw-------. 1 boincer umatlas    901120 May  3 15:40 result.tar.gz
15:40:42 (1555530): run_atlas exited; CPU time 32652.917927
15:40:42 (1555530): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN