Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:28:29 (13023): wrapper (7.7.26015): starting
18:28:29 (13023): wrapper: running run_atlas (--nthreads 8)
[2026-05-03 18:28:29] Arguments: --nthreads 8
[2026-05-03 18:28:29] Threads: 8
[2026-05-03 18:28:29] Checking for CVMFS
[2026-05-03 18:28:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-03 18:28:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-03 18:28:29] Running cvmfs_config stat atlas.cern.ch
[2026-05-03 18:28:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-03 18:28:29] 2.11.2.0 10374 25884 99124 159174 3 223 20877462 25165825 345 130560 0 14159929 99.935 4561056 6198 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-03 18:28:29] CVMFS is ok
[2026-05-03 18:28:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 18:28:29] Checking for apptainer binary...
[2026-05-03 18:28:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-03 18:28:29] Running /usr/bin/apptainer --version
[2026-05-03 18:28:29] apptainer version 1.3.2-1.el7
[2026-05-03 18:28:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 18:28:31] cg-vwn364.simple-grid.lan
[2026-05-03 18:28:31] apptainer works
[2026-05-03 18:28:31] Set ATHENA_PROC_NUMBER=8
[2026-05-03 18:28:31] Set ATHENA_CORE_NUMBER=8
[2026-05-03 18:28:31] Starting ATLAS job with PandaID=7127880589
[2026-05-03 18:28:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 20:51:09]  *** The last 200 lines of the pilot log: ***
[2026-05-03 20:51:09] 2026-05-03 18:50:18,320 | INFO     | job 7127880589 has finished - writing final server update
[2026-05-03 20:51:09] 2026-05-03 18:50:18,320 | INFO     | total number of processed events: 400 (read)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,323 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7127880589/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,323 | INFO     | extracted standard info from prmon json
[2026-05-03 20:51:09] 2026-05-03 18:50:18,323 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 20:51:09] 2026-05-03 18:50:18,324 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 20:51:09] 2026-05-03 18:50:18,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 20:51:09] 2026-05-03 18:50:18,327 | INFO     | fitting pss+swap vs Time
[2026-05-03 20:51:09] 2026-05-03 18:50:18,328 | INFO     | sum of square deviations: 832722590.0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,329 | INFO     | sum of deviations: -5410210230.999998
[2026-05-03 20:51:09] 2026-05-03 18:50:18,329 | INFO     | mean x (centered): 0.0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,329 | INFO     | mean y: 2554488.158273381
[2026-05-03 20:51:09] 2026-05-03 18:50:18,329 | INFO     | intersect: 2554488.158273381
[2026-05-03 20:51:09] 2026-05-03 18:50:18,329 | INFO     | chi2: 1.7206138078206066
[2026-05-03 20:51:09] 2026-05-03 18:50:18,330 | INFO     | sum of square deviations: 746051197.5
[2026-05-03 20:51:09] 2026-05-03 18:50:18,331 | INFO     | sum of deviations: -4605131468.499997
[2026-05-03 20:51:09] 2026-05-03 18:50:18,331 | INFO     | mean x (centered): 0.0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,331 | INFO     | mean y: 2555905.3656716417
[2026-05-03 20:51:09] 2026-05-03 18:50:18,331 | INFO     | intersect: 2555905.3656716417
[2026-05-03 20:51:09] 2026-05-03 18:50:18,331 | INFO     | chi2: 1.7215534804528083
[2026-05-03 20:51:09] 2026-05-03 18:50:18,332 | INFO     | current chi2=1.7215534804528083 (change=-0.05461264043858641 %)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,332 | INFO     | right removable region: 133
[2026-05-03 20:51:09] 2026-05-03 18:50:18,332 | INFO     | sum of square deviations: 746051197.5
[2026-05-03 20:51:09] 2026-05-03 18:50:18,333 | INFO     | sum of deviations: -27347012784.999996
[2026-05-03 20:51:09] 2026-05-03 18:50:18,333 | INFO     | mean x (centered): 0.0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,333 | INFO     | mean y: 2592466.2089552237
[2026-05-03 20:51:09] 2026-05-03 18:50:18,333 | INFO     | intersect: 2592466.2089552237
[2026-05-03 20:51:09] 2026-05-03 18:50:18,334 | INFO     | chi2: 0.1670973991216269
[2026-05-03 20:51:09] 2026-05-03 18:50:18,334 | INFO     | current chi2=0.1670973991216269 (change=90.28850062912846 %)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,334 | INFO     | sum of square deviations: 665612480.0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,335 | INFO     | sum of deviations: -28346853353.999992
[2026-05-03 20:51:09] 2026-05-03 18:50:18,335 | INFO     | mean x (centered): 0.0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,335 | INFO     | mean y: 2594256.3643410853
[2026-05-03 20:51:09] 2026-05-03 18:50:18,335 | INFO     | intersect: 2594256.3643410853
[2026-05-03 20:51:09] 2026-05-03 18:50:18,336 | INFO     | chi2: 0.12410077957548638
[2026-05-03 20:51:09] 2026-05-03 18:50:18,336 | INFO     | current chi2=0.12410077957548638 (change=25.731471448483852 %)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,336 | INFO     | sum of square deviations: 591173875.0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,337 | INFO     | sum of deviations: -24900191887.0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,337 | INFO     | mean x (centered): 0.0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,337 | INFO     | mean y: 2587182.5
[2026-05-03 20:51:09] 2026-05-03 18:50:18,337 | INFO     | intersect: 2587182.5
[2026-05-03 20:51:09] 2026-05-03 18:50:18,338 | INFO     | chi2: 0.12376042551861774
[2026-05-03 20:51:09] 2026-05-03 18:50:18,338 | INFO     | current chi2=0.12376042551861774 (change=0.27425617956058834 %)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,338 | INFO     | left removable region: 15
[2026-05-03 20:51:09] 2026-05-03 18:50:18,338 | INFO     | sum of square deviations: 509440249.5
[2026-05-03 20:51:09] 2026-05-03 18:50:18,339 | INFO     | sum of deviations: -23296479316.999992
[2026-05-03 20:51:09] 2026-05-03 18:50:18,339 | INFO     | mean x (centered): 0.0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,339 | INFO     | mean y: 2590776.1016949154
[2026-05-03 20:51:09] 2026-05-03 18:50:18,339 | INFO     | intersect: 2590776.1016949154
[2026-05-03 20:51:09] 2026-05-03 18:50:18,340 | INFO     | chi2: 0.11680540563727804
[2026-05-03 20:51:09] 2026-05-03 18:50:18,340 | INFO     | current memory leak: -45.73 B/s (using 118 data points, chi2=0.12)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,340 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,341 | INFO     | ..............................
[2026-05-03 20:51:09] 2026-05-03 18:50:18,341 | INFO     | . Timing measurements:
[2026-05-03 20:51:09] 2026-05-03 18:50:18,341 | INFO     | . get job = 0 s
[2026-05-03 20:51:09] 2026-05-03 18:50:18,341 | INFO     | . initial setup = 6 s
[2026-05-03 20:51:09] 2026-05-03 18:50:18,341 | INFO     | . payload setup = 12 s
[2026-05-03 20:51:09] 2026-05-03 18:50:18,341 | INFO     | . stage-in = 0 s
[2026-05-03 20:51:09] 2026-05-03 18:50:18,341 | INFO     | . payload execution = 8459 s
[2026-05-03 20:51:09] 2026-05-03 18:50:18,342 | INFO     | . stage-out = 0 s
[2026-05-03 20:51:09] 2026-05-03 18:50:18,342 | INFO     | . log creation = 0 s
[2026-05-03 20:51:09] 2026-05-03 18:50:18,342 | INFO     | ..............................
[2026-05-03 20:51:09] 2026-05-03 18:50:18,659 | INFO     | 
[2026-05-03 20:51:09] 2026-05-03 18:50:18,659 | INFO     | job summary report
[2026-05-03 20:51:09] 2026-05-03 18:50:18,659 | INFO     | --------------------------------------------------
[2026-05-03 20:51:09] 2026-05-03 18:50:18,659 | INFO     | PanDA job id: 7127880589
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | task id: 50010719
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | errors: (none)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | pilot state: finished 
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | transexitcode: 0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | exeerrorcode: 0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | exeerrordiag: 
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | exitcode: 0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | exitmsg: OK
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | cpuconsumptiontime: 42117 s
[2026-05-03 20:51:09] 2026-05-03 18:50:18,660 | INFO     | nevents: 400
[2026-05-03 20:51:09] 2026-05-03 18:50:18,661 | INFO     | neventsw: 0
[2026-05-03 20:51:09] 2026-05-03 18:50:18,661 | INFO     | pid: 21201
[2026-05-03 20:51:09] 2026-05-03 18:50:18,661 | INFO     | pgrp: 21201
[2026-05-03 20:51:09] 2026-05-03 18:50:18,661 | INFO     | corecount: 8
[2026-05-03 20:51:09] 2026-05-03 18:50:18,661 | INFO     | event service: False
[2026-05-03 20:51:09] 2026-05-03 18:50:18,661 | INFO     | sizes: {0: 2275274, 1: 2277103, 12: 2277103, 8472: 2305054, 8473: 2314054, 8474: 2314110, 8477: 2314432}
[2026-05-03 20:51:09] 2026-05-03 18:50:18,661 | INFO     | --------------------------------------------------
[2026-05-03 20:51:09] 2026-05-03 18:50:18,661 | INFO     | 
[2026-05-03 20:51:09] 2026-05-03 18:50:18,661 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-05-03 20:51:09] 2026-05-03 18:50:18,687 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,687 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,687 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,687 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,689 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,689 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 20:51:09] 2026-05-03 18:50:18,689 | INFO     | job 7127880589 has completed (purged errors)
[2026-05-03 20:51:09] 2026-05-03 18:50:18,689 | INFO     | overall cleanup function is called
[2026-05-03 20:51:09] 2026-05-03 18:50:19,697 | INFO     | --- collectZombieJob: --- 10, [21201]
[2026-05-03 20:51:09] 2026-05-03 18:50:19,697 | INFO     | zombie collector waiting for pid 21201
[2026-05-03 20:51:09] 2026-05-03 18:50:19,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 20:51:09] 2026-05-03 18:50:19,698 | INFO     | collected zombie processes
[2026-05-03 20:51:09] 2026-05-03 18:50:19,698 | INFO     | will attempt to kill all subprocesses of pid=21201
[2026-05-03 20:51:09] 2026-05-03 18:50:19,749 | INFO     | process IDs to be killed: [21201] (in reverse order)
[2026-05-03 20:51:09] 2026-05-03 18:50:19,794 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 20:51:09] 2026-05-03 18:50:19,795 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 20:51:09] 2026-05-03 18:50:19,797 | INFO     | did not find any defunct processes belonging to 21201
[2026-05-03 20:51:09] 2026-05-03 18:50:19,798 | INFO     | did not find any defunct processes belonging to 21201
[2026-05-03 20:51:09] 2026-05-03 18:50:19,798 | INFO     | Ready for new job
[2026-05-03 20:51:09] 2026-05-03 18:50:19,800 | INFO     | ***************************************
[2026-05-03 20:51:09] 2026-05-03 18:50:19,800 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 20:51:09] 2026-05-03 18:50:19,800 | INFO     | ***************************************
[2026-05-03 20:51:09] 2026-05-03 18:50:19,800 | INFO     | 
[2026-05-03 20:51:09] 2026-05-03 18:50:19,801 | INFO     | pilot is running in a VM
[2026-05-03 20:51:09] 2026-05-03 18:50:19,801 | INFO     | architecture information:
[2026-05-03 20:51:09] 2026-05-03 18:50:19,801 | INFO     | executing command: cat /etc/os-release
[2026-05-03 20:51:09] 2026-05-03 18:50:19,817 | INFO     | cat /etc/os-release:
[2026-05-03 20:51:09] NAME="CentOS Linux"
[2026-05-03 20:51:09] VERSION="7 (Core)"
[2026-05-03 20:51:09] ID="centos"
[2026-05-03 20:51:09] ID_LIKE="rhel fedora"
[2026-05-03 20:51:09] VERSION_ID="7"
[2026-05-03 20:51:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 20:51:09] ANSI_COLOR="0;31"
[2026-05-03 20:51:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 20:51:09] HOME_URL="https://www.centos.org/"
[2026-05-03 20:51:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 20:51:09] 
[2026-05-03 20:51:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 20:51:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 20:51:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 20:51:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 20:51:09] 
[2026-05-03 20:51:09] 2026-05-03 18:50:19,817 | INFO     | ***************************************
[2026-05-03 20:51:09] 2026-05-03 18:50:20,320 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-05-03 20:51:09] 2026-05-03 18:50:20,342 | INFO     | sufficient remaining disk space (497387831296 B)
[2026-05-03 20:51:09] 2026-05-03 18:50:20,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 20:51:09] 2026-05-03 18:50:20,343 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 20:51:09] 2026-05-03 18:50:20,343 | INFO     | update_server=False
[2026-05-03 20:51:09] 2026-05-03 18:50:20,343 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 20:51:09] 2026-05-03 18:50:20,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 20:51:09] 2026-05-03 18:50:20,513 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-03 20:51:09] 2026-05-03 18:50:20,514 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-03 20:51:09] 2026-05-03 18:50:20,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 20:51:09] 2026-05-03 18:50:20,514 | INFO     | will abort loop
[2026-05-03 20:51:09] 2026-05-03 18:50:20,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 20:51:09] 2026-05-03 18:50:21,307 | INFO     | all data control threads have been joined
[2026-05-03 20:51:09] 2026-05-03 18:50:21,348 | INFO     | [job] retrieve thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:21,349 | INFO     | [job] queue monitor thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:21,448 | INFO     | [payload] validate_post thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:21,483 | INFO     | [job] validate thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:21,520 | INFO     | [job] job monitor thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:21,628 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:21,711 | INFO     | all job control threads have been joined
[2026-05-03 20:51:09] 2026-05-03 18:50:21,739 | INFO     | all payload control threads have been joined
[2026-05-03 20:51:09] 2026-05-03 18:50:21,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 20:51:09] 2026-05-03 18:50:22,182 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:22,217 | INFO     | [payload] failed_post thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:22,225 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:22,313 | INFO     | [data] control thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:22,537 | INFO     | [data] copytool_out thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:22,653 | INFO     | [data] copytool_in thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:22,717 | INFO     | [job] control thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:22,745 | INFO     | [payload] control thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:25,924 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:30,433 | INFO     | job.realtimelogging is not enabled
[2026-05-03 20:51:09] 2026-05-03 18:50:31,439 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 20:51:09] 2026-05-03 18:50:50,548 | INFO     | PID=16764 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-03 20:51:09] 2026-05-03 18:50:50,548 | INFO     | .. there are 2 such processes running
[2026-05-03 20:51:09] 2026-05-03 18:50:50,548 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 20:51:09] 2026-05-03 18:50:50,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 20:51:09] 2026-05-03 18:50:50,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 20:51:09] 2026-05-03 18:51:03,669 | INFO     | [monitor] cgroup control has ended
[2026-05-03 20:51:09] 2026-05-03 18:51:04,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139753336792896)>', '<ExcThread(monitor, started 139752883853056)>']
[2026-05-03 20:51:09] 2026-05-03 18:51:04,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 20:51:09] 2026-05-03 18:51:04,612 | INFO     | [monitor] control thread has ended
[2026-05-03 20:51:09] 2026-05-03 18:51:09,584 | INFO     | all workflow threads have been joined
[2026-05-03 20:51:09] 2026-05-03 18:51:09,584 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 20:51:09] 2026-05-03 18:51:09,585 | INFO     | traces error code: 0
[2026-05-03 20:51:09] 2026-05-03 18:51:09,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 20:51:09] 2026-05-03 18:51:09,724 [wrapper] ==== pilot stdout END ====
[2026-05-03 20:51:09] 2026-05-03 18:51:09,728 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 20:51:09] 2026-05-03 18:51:09,732 [wrapper] pilotpid: 16764
[2026-05-03 20:51:09] 2026-05-03 18:51:09,736 [wrapper] Pilot exit status: 0
[2026-05-03 20:51:09] 2026-05-03 18:51:09,753 [wrapper] pandaids: 7127880589
[2026-05-03 20:51:09] 2026-05-03 18:51:09,791 [wrapper] cleanup supervisor_pilot  2717 16765
[2026-05-03 20:51:09] 2026-05-03 18:51:09,794 [wrapper] Test setup, not cleaning
[2026-05-03 20:51:09] 2026-05-03 18:51:09,806 [wrapper] apfmon messages muted
[2026-05-03 20:51:09] 2026-05-03 18:51:09,809 [wrapper] ==== wrapper stdout END ====
[2026-05-03 20:51:09] 2026-05-03 18:51:09,812 [wrapper] ==== wrapper stderr END ====
[2026-05-03 20:51:09]  *** Error codes and diagnostics ***
[2026-05-03 20:51:09]     "exeErrorCode": 0,
[2026-05-03 20:51:09]     "pilotErrorCode": 0,
[2026-05-03 20:51:09]  *** Listing of results directory ***
[2026-05-03 20:51:09] total 401920
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc    683926 May  3 18:03 pilot3.tar.gz
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc      5631 May  3 18:24 queuedata.json
[2026-05-03 20:51:09] -rwx------. 1 boinc boinc     36322 May  3 18:25 runpilot2-wrapper.sh
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc       100 May  3 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 20:51:09] -rwxr-xr-x. 1 boinc boinc      7986 May  3 18:28 run_atlas
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc       105 May  3 18:28 job.xml
[2026-05-03 20:51:09] -rw-r--r--. 2 boinc boinc 242956019 May  3 18:28 EVNT.50010716._000077.pool.root.1
[2026-05-03 20:51:09] -rw-r--r--. 2 boinc boinc     15667 May  3 18:28 start_atlas.sh
[2026-05-03 20:51:09] drwxrwx--x. 2 boinc boinc        68 May  3 18:28 shared
[2026-05-03 20:51:09] -rw-r--r--. 2 boinc boinc    697396 May  3 18:28 input.tar.gz
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc      6308 May  3 18:28 init_data.xml
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc         0 May  3 18:28 boinc_lockfile
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc      2518 May  3 18:28 pandaJob.out
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc   1002987 May  3 18:28 agis_schedconf.cvmfs.json
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc   1508687 May  3 18:28 agis_ddmendpoints.agis.ALL.json
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc       415 May  3 18:28 workernode_map.json
[2026-05-03 20:51:09] drwx------. 5 boinc boinc      4096 May  3 18:28 pilot3
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc 162187434 May  3 20:49 HITS.50010719._001912.pool.root.1
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc        95 May  3 20:50 pilot_heartbeat.json
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc       487 May  3 20:50 boinc_task_state.xml
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc      1011 May  3 20:50 memory_monitor_summary.json
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc    338924 May  3 20:50 log.50010719._001912.job.log.tgz.1
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc      6327 May  3 20:50 heartbeat_new.json
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc      6218 May  3 20:50 heartbeat.json
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc      8192 May  3 20:50 boinc_mmap_file
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc        27 May  3 20:50 wrapper_checkpoint.txt
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc      5142 May  3 20:51 pilotlog.txt
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc    812860 May  3 20:51 log.50010719._001912.job.log.1
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc       357 May  3 20:51 output.list
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc       410 May  3 20:51 runtime_log
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc   1167360 May  3 20:51 result.tar.gz
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc      8454 May  3 20:51 runtime_log.err
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc       653 May  3 20:51 76ea4be59e80.diag
[2026-05-03 20:51:09] -rw-r--r--. 1 boinc boinc     20615 May  3 20:51 stderr.txt
[2026-05-03 20:51:09] HITS file was successfully produced:
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc 162187434 May  3 20:49 shared/HITS.pool.root.1
[2026-05-03 20:51:09]  *** Contents of shared directory: ***
[2026-05-03 20:51:09] total 397492
[2026-05-03 20:51:09] -rw-r--r--. 2 boinc boinc 242956019 May  3 18:28 ATLAS.root_0
[2026-05-03 20:51:09] -rw-r--r--. 2 boinc boinc     15667 May  3 18:28 start_atlas.sh
[2026-05-03 20:51:09] -rw-r--r--. 2 boinc boinc    697396 May  3 18:28 input.tar.gz
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc 162187434 May  3 20:49 HITS.pool.root.1
[2026-05-03 20:51:09] -rw-------. 1 boinc boinc   1167360 May  3 20:51 result.tar.gz
20:51:11 (13023): run_atlas exited; CPU time 42180.003322
20:51:11 (13023): called boinc_finish(0)

</stderr_txt>
]]>

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