Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:35:22 (9832): wrapper (7.7.26015): starting
18:35:22 (9832): wrapper: running run_atlas (--nthreads 8)
[2026-05-03 18:35:22] Arguments: --nthreads 8
[2026-05-03 18:35:22] Threads: 8
[2026-05-03 18:35:22] Checking for CVMFS
[2026-05-03 18:35:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-03 18:35:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-03 18:35:23] Running cvmfs_config stat atlas.cern.ch
[2026-05-03 18:35:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-03 18:35:23] 2.11.2.0 15381 25891 96300 159174 0 243 17411992 25165824 505 130560 0 9837656 99.928 6706825 9150 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-03 18:35:23] CVMFS is ok
[2026-05-03 18:35:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 18:35:23] Checking for apptainer binary...
[2026-05-03 18:35:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-03 18:35:23] Running /usr/bin/apptainer --version
[2026-05-03 18:35:23] apptainer version 1.3.2-1.el7
[2026-05-03 18:35:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 18:35:27] cg-vwn426.simple-grid.lan
[2026-05-03 18:35:27] apptainer works
[2026-05-03 18:35:27] Set ATHENA_PROC_NUMBER=8
[2026-05-03 18:35:27] Set ATHENA_CORE_NUMBER=8
[2026-05-03 18:35:27] Starting ATLAS job with PandaID=7127813171
[2026-05-03 18:35:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 21:12:29]  *** The last 200 lines of the pilot log: ***
[2026-05-03 21:12:29] 2026-05-03 19:11:58,094 | INFO     | job 7127813171 has state=finished
[2026-05-03 21:12:29] 2026-05-03 19:11:58,095 | INFO     | preparing for final server update for job 7127813171 in state='finished'
[2026-05-03 21:12:29] 2026-05-03 19:11:58,095 | INFO     | reading metadata from: /var/lib/boinc/slots/2/PanDA_Pilot-7127813171/jobReport.json
[2026-05-03 21:12:29] 2026-05-03 19:11:58,097 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/2/workernode_map.json
[2026-05-03 21:12:29] 2026-05-03 19:11:58,098 | INFO     | this job has now completed (state=finished)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,098 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,098 | INFO     | log transfer has been attempted: DONE
[2026-05-03 21:12:29] 2026-05-03 19:11:58,098 | INFO     | job 7127813171 has finished - writing final server update
[2026-05-03 21:12:29] 2026-05-03 19:11:58,098 | INFO     | total number of processed events: 400 (read)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,100 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-7127813171/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,101 | INFO     | extracted standard info from prmon json
[2026-05-03 21:12:29] 2026-05-03 19:11:58,101 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 21:12:29] 2026-05-03 19:11:58,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 21:12:29] 2026-05-03 19:11:58,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 21:12:29] 2026-05-03 19:11:58,105 | INFO     | fitting pss+swap vs Time
[2026-05-03 21:12:29] 2026-05-03 19:11:58,105 | INFO     | sum of square deviations: 1110539892.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,106 | INFO     | sum of deviations: 7119696373.999969
[2026-05-03 21:12:29] 2026-05-03 19:11:58,106 | INFO     | mean x (centered): 0.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,106 | INFO     | mean y: 2540300.908496732
[2026-05-03 21:12:29] 2026-05-03 19:11:58,107 | INFO     | intersect: 2540300.908496732
[2026-05-03 21:12:29] 2026-05-03 19:11:58,107 | INFO     | chi2: 2.184840190282567
[2026-05-03 21:12:29] 2026-05-03 19:11:58,107 | INFO     | sum of square deviations: 1005179777.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,108 | INFO     | sum of deviations: 7086679758.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,108 | INFO     | mean x (centered): 0.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,108 | INFO     | mean y: 2540253.108108108
[2026-05-03 21:12:29] 2026-05-03 19:11:58,109 | INFO     | intersect: 2540253.108108108
[2026-05-03 21:12:29] 2026-05-03 19:11:58,109 | INFO     | chi2: 2.1871408225809463
[2026-05-03 21:12:29] 2026-05-03 19:11:58,109 | INFO     | current chi2=2.1871408225809463 (change=-0.10529979760587702 %)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,109 | INFO     | right removable region: 147
[2026-05-03 21:12:29] 2026-05-03 19:11:58,110 | INFO     | sum of square deviations: 1005179777.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,111 | INFO     | sum of deviations: -23980336104.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,111 | INFO     | mean x (centered): 0.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,111 | INFO     | mean y: 2584857.756756757
[2026-05-03 21:12:29] 2026-05-03 19:11:58,111 | INFO     | intersect: 2584857.756756757
[2026-05-03 21:12:29] 2026-05-03 19:11:58,111 | INFO     | chi2: 0.17423902992759133
[2026-05-03 21:12:29] 2026-05-03 19:11:58,112 | INFO     | current chi2=0.17423902992759133 (change=92.02509040695298 %)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,112 | INFO     | sum of square deviations: 906703512.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,113 | INFO     | sum of deviations: -25226646136.000004
[2026-05-03 21:12:29] 2026-05-03 19:11:58,113 | INFO     | mean x (centered): 0.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,113 | INFO     | mean y: 2586693.727272727
[2026-05-03 21:12:29] 2026-05-03 19:11:58,113 | INFO     | intersect: 2586693.727272727
[2026-05-03 21:12:29] 2026-05-03 19:11:58,113 | INFO     | chi2: 0.1371223425542613
[2026-05-03 21:12:29] 2026-05-03 19:11:58,114 | INFO     | current chi2=0.1371223425542613 (change=21.302165989304825 %)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,114 | INFO     | left removable region: 10
[2026-05-03 21:12:29] 2026-05-03 19:11:58,114 | INFO     | sum of square deviations: 797291228.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,115 | INFO     | sum of deviations: -24048272170.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,115 | INFO     | mean x (centered): 0.0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,115 | INFO     | mean y: 2588665.905109489
[2026-05-03 21:12:29] 2026-05-03 19:11:58,115 | INFO     | intersect: 2588665.905109489
[2026-05-03 21:12:29] 2026-05-03 19:11:58,116 | INFO     | chi2: 0.13182846963720052
[2026-05-03 21:12:29] 2026-05-03 19:11:58,116 | INFO     | current memory leak: -30.16 B/s (using 137 data points, chi2=0.13)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,116 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,116 | INFO     | ..............................
[2026-05-03 21:12:29] 2026-05-03 19:11:58,116 | INFO     | . Timing measurements:
[2026-05-03 21:12:29] 2026-05-03 19:11:58,117 | INFO     | . get job = 0 s
[2026-05-03 21:12:29] 2026-05-03 19:11:58,117 | INFO     | . initial setup = 8 s
[2026-05-03 21:12:29] 2026-05-03 19:11:58,117 | INFO     | . payload setup = 22 s
[2026-05-03 21:12:29] 2026-05-03 19:11:58,117 | INFO     | . stage-in = 0 s
[2026-05-03 21:12:29] 2026-05-03 19:11:58,117 | INFO     | . payload execution = 9316 s
[2026-05-03 21:12:29] 2026-05-03 19:11:58,117 | INFO     | . stage-out = 0 s
[2026-05-03 21:12:29] 2026-05-03 19:11:58,117 | INFO     | . log creation = 0 s
[2026-05-03 21:12:29] 2026-05-03 19:11:58,117 | INFO     | ..............................
[2026-05-03 21:12:29] 2026-05-03 19:11:58,228 | INFO     | 
[2026-05-03 21:12:29] 2026-05-03 19:11:58,228 | INFO     | job summary report
[2026-05-03 21:12:29] 2026-05-03 19:11:58,228 | INFO     | --------------------------------------------------
[2026-05-03 21:12:29] 2026-05-03 19:11:58,228 | INFO     | PanDA job id: 7127813171
[2026-05-03 21:12:29] 2026-05-03 19:11:58,228 | INFO     | task id: 50010719
[2026-05-03 21:12:29] 2026-05-03 19:11:58,228 | INFO     | errors: (none)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,228 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 21:12:29] 2026-05-03 19:11:58,228 | INFO     | pilot state: finished 
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | transexitcode: 0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | exeerrorcode: 0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | exeerrordiag: 
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | exitcode: 0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | exitmsg: OK
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | cpuconsumptiontime: 41979 s
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | nevents: 400
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | neventsw: 0
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | pid: 20529
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | pgrp: 20529
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | corecount: 8
[2026-05-03 21:12:29] 2026-05-03 19:11:58,229 | INFO     | event service: False
[2026-05-03 21:12:29] 2026-05-03 19:11:58,230 | INFO     | sizes: {0: 2275647, 1: 2277075, 11: 2277103, 9343: 2305545, 9345: 2314543, 9347: 2315013}
[2026-05-03 21:12:29] 2026-05-03 19:11:58,230 | INFO     | --------------------------------------------------
[2026-05-03 21:12:29] 2026-05-03 19:11:58,230 | INFO     | 
[2026-05-03 21:12:29] 2026-05-03 19:11:58,230 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-05-03 21:12:29] 2026-05-03 19:11:58,252 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,252 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,252 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,252 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,254 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,254 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 21:12:29] 2026-05-03 19:11:58,254 | INFO     | job 7127813171 has completed (purged errors)
[2026-05-03 21:12:29] 2026-05-03 19:11:58,254 | INFO     | overall cleanup function is called
[2026-05-03 21:12:29] 2026-05-03 19:11:59,262 | INFO     | --- collectZombieJob: --- 10, [20529]
[2026-05-03 21:12:29] 2026-05-03 19:11:59,262 | INFO     | zombie collector waiting for pid 20529
[2026-05-03 21:12:29] 2026-05-03 19:11:59,262 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 21:12:29] 2026-05-03 19:11:59,263 | INFO     | collected zombie processes
[2026-05-03 21:12:29] 2026-05-03 19:11:59,263 | INFO     | will attempt to kill all subprocesses of pid=20529
[2026-05-03 21:12:29] 2026-05-03 19:11:59,311 | INFO     | process IDs to be killed: [20529] (in reverse order)
[2026-05-03 21:12:29] 2026-05-03 19:11:59,355 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 21:12:29] 2026-05-03 19:11:59,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 21:12:29] 2026-05-03 19:11:59,357 | INFO     | did not find any defunct processes belonging to 20529
[2026-05-03 21:12:29] 2026-05-03 19:11:59,359 | INFO     | did not find any defunct processes belonging to 20529
[2026-05-03 21:12:29] 2026-05-03 19:11:59,359 | INFO     | Ready for new job
[2026-05-03 21:12:29] 2026-05-03 19:11:59,360 | INFO     | ***************************************
[2026-05-03 21:12:29] 2026-05-03 19:11:59,361 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 21:12:29] 2026-05-03 19:11:59,361 | INFO     | ***************************************
[2026-05-03 21:12:29] 2026-05-03 19:11:59,361 | INFO     | 
[2026-05-03 21:12:29] 2026-05-03 19:11:59,361 | INFO     | pilot is running in a VM
[2026-05-03 21:12:29] 2026-05-03 19:11:59,361 | INFO     | architecture information:
[2026-05-03 21:12:29] 2026-05-03 19:11:59,362 | INFO     | executing command: cat /etc/os-release
[2026-05-03 21:12:29] 2026-05-03 19:11:59,378 | INFO     | cat /etc/os-release:
[2026-05-03 21:12:29] NAME="CentOS Linux"
[2026-05-03 21:12:29] VERSION="7 (Core)"
[2026-05-03 21:12:29] ID="centos"
[2026-05-03 21:12:29] ID_LIKE="rhel fedora"
[2026-05-03 21:12:29] VERSION_ID="7"
[2026-05-03 21:12:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 21:12:29] ANSI_COLOR="0;31"
[2026-05-03 21:12:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 21:12:29] HOME_URL="https://www.centos.org/"
[2026-05-03 21:12:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 21:12:29] 
[2026-05-03 21:12:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 21:12:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 21:12:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 21:12:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 21:12:29] 
[2026-05-03 21:12:29] 2026-05-03 19:11:59,378 | INFO     | ***************************************
[2026-05-03 21:12:29] 2026-05-03 19:11:59,881 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-05-03 21:12:29] 2026-05-03 19:11:59,899 | INFO     | sufficient remaining disk space (497679335424 B)
[2026-05-03 21:12:29] 2026-05-03 19:11:59,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 21:12:29] 2026-05-03 19:11:59,899 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 21:12:29] 2026-05-03 19:11:59,899 | INFO     | update_server=False
[2026-05-03 21:12:29] 2026-05-03 19:11:59,899 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 21:12:29] 2026-05-03 19:11:59,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 21:12:29] 2026-05-03 19:11:59,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 21:12:29] 2026-05-03 19:11:59,910 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-03 21:12:29] 2026-05-03 19:11:59,910 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-03 21:12:29] 2026-05-03 19:11:59,910 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 21:12:29] 2026-05-03 19:11:59,910 | INFO     | will abort loop
[2026-05-03 21:12:29] 2026-05-03 19:12:00,091 | INFO     | all job control threads have been joined
[2026-05-03 21:12:29] 2026-05-03 19:12:00,290 | INFO     | all data control threads have been joined
[2026-05-03 21:12:29] 2026-05-03 19:12:00,905 | INFO     | [job] retrieve thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:00,906 | INFO     | [job] queue monitor thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:00,916 | INFO     | [job] job monitor thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:01,085 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:01,097 | INFO     | [job] control thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:01,123 | INFO     | all payload control threads have been joined
[2026-05-03 21:12:29] 2026-05-03 19:12:01,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 21:12:29] 2026-05-03 19:12:01,163 | INFO     | [payload] validate_post thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:01,188 | INFO     | [job] validate thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:01,190 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:01,295 | INFO     | [data] control thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:01,412 | INFO     | [payload] failed_post thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:01,572 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:01,579 | INFO     | [data] copytool_in thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:02,129 | INFO     | [payload] control thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:02,157 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:03,140 | INFO     | [data] copytool_out thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:03,907 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 21:12:29] 2026-05-03 19:12:14,992 | INFO     | [monitor] cgroup control has ended
[2026-05-03 21:12:29] 2026-05-03 19:12:16,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182326069056)>', '<ExcThread(monitor, started 140181717886720)>']
[2026-05-03 21:12:29] 2026-05-03 19:12:21,218 | INFO     | all workflow threads have been joined
[2026-05-03 21:12:29] 2026-05-03 19:12:21,219 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 21:12:29] 2026-05-03 19:12:21,219 | INFO     | traces error code: 0
[2026-05-03 21:12:29] 2026-05-03 19:12:21,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 21:12:29] 2026-05-03 19:12:29,627 | INFO     | PID=14555 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-03 21:12:29] 2026-05-03 19:12:29,627 | INFO     | .. there are 2 such processes running
[2026-05-03 21:12:29] 2026-05-03 19:12:29,629 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 21:12:29] 2026-05-03 19:12:29,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 21:12:29] 2026-05-03 19:12:29,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 21:12:29] 2026-05-03 19:12:29,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 21:12:29] 2026-05-03 19:12:29,629 | CRITICAL | thread 'MainThread' is not alive
[2026-05-03 21:12:29] 2026-05-03 19:12:29,629 | INFO     | [monitor] control thread has ended
[2026-05-03 21:12:29] 2026-05-03 19:12:29,768 [wrapper] ==== pilot stdout END ====
[2026-05-03 21:12:29] 2026-05-03 19:12:29,771 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 21:12:29] 2026-05-03 19:12:29,775 [wrapper] pilotpid: 14555
[2026-05-03 21:12:29] 2026-05-03 19:12:29,779 [wrapper] Pilot exit status: 0
[2026-05-03 21:12:29] 2026-05-03 19:12:29,794 [wrapper] pandaids: 7127813171
[2026-05-03 21:12:29] 2026-05-03 19:12:29,825 [wrapper] cleanup supervisor_pilot 29581 14556
[2026-05-03 21:12:29] 2026-05-03 19:12:29,829 [wrapper] Test setup, not cleaning
[2026-05-03 21:12:29] 2026-05-03 19:12:29,839 [wrapper] apfmon messages muted
[2026-05-03 21:12:29] 2026-05-03 19:12:29,842 [wrapper] ==== wrapper stdout END ====
[2026-05-03 21:12:29] 2026-05-03 19:12:29,845 [wrapper] ==== wrapper stderr END ====
[2026-05-03 21:12:29]  *** Error codes and diagnostics ***
[2026-05-03 21:12:29]     "exeErrorCode": 0,
[2026-05-03 21:12:29]     "pilotErrorCode": 0,
[2026-05-03 21:12:29]  *** Listing of results directory ***
[2026-05-03 21:12:29] total 419136
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc    683926 May  3 16:06 pilot3.tar.gz
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc      5631 May  3 16:26 queuedata.json
[2026-05-03 21:12:29] -rwx------. 1 boinc boinc     36322 May  3 16:27 runpilot2-wrapper.sh
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc       100 May  3 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 21:12:29] -rwxr-xr-x. 1 boinc boinc      7986 May  3 18:35 run_atlas
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc       105 May  3 18:35 job.xml
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc      6306 May  3 18:35 init_data.xml
[2026-05-03 21:12:29] -rw-r--r--. 2 boinc boinc 248178824 May  3 18:35 EVNT.50010716._000051.pool.root.1
[2026-05-03 21:12:29] -rw-r--r--. 2 boinc boinc     15667 May  3 18:35 start_atlas.sh
[2026-05-03 21:12:29] drwxrwx--x. 2 boinc boinc        68 May  3 18:35 shared
[2026-05-03 21:12:29] -rw-r--r--. 2 boinc boinc    697394 May  3 18:35 input.tar.gz
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc         0 May  3 18:35 boinc_lockfile
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc      2519 May  3 18:35 pandaJob.out
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc   1002987 May  3 18:35 agis_schedconf.cvmfs.json
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc   1508687 May  3 18:35 agis_ddmendpoints.agis.ALL.json
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc       415 May  3 18:35 workernode_map.json
[2026-05-03 21:12:29] drwx------. 5 boinc boinc      4096 May  3 18:35 pilot3
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc       487 May  3 21:11 boinc_task_state.xml
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc 174416726 May  3 21:11 HITS.50010719._001262.pool.root.1
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc      1008 May  3 21:11 memory_monitor_summary.json
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc    346553 May  3 21:11 log.50010719._001262.job.log.tgz.1
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc      6323 May  3 21:11 heartbeat_new.json
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc      6214 May  3 21:11 heartbeat.json
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc      8192 May  3 21:12 boinc_mmap_file
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc        27 May  3 21:12 wrapper_checkpoint.txt
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc        95 May  3 21:12 pilot_heartbeat.json
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc       890 May  3 21:12 pilotlog.txt
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc    891961 May  3 21:12 log.50010719._001262.job.log.1
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc       357 May  3 21:12 output.list
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc       410 May  3 21:12 runtime_log
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc   1259520 May  3 21:12 result.tar.gz
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc      8438 May  3 21:12 runtime_log.err
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc       652 May  3 21:12 5b57d8db5de5.diag
[2026-05-03 21:12:29] -rw-r--r--. 1 boinc boinc     20772 May  3 21:12 stderr.txt
[2026-05-03 21:12:29] HITS file was successfully produced:
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc 174416726 May  3 21:11 shared/HITS.pool.root.1
[2026-05-03 21:12:29]  *** Contents of shared directory: ***
[2026-05-03 21:12:29] total 414628
[2026-05-03 21:12:29] -rw-r--r--. 2 boinc boinc 248178824 May  3 18:35 ATLAS.root_0
[2026-05-03 21:12:29] -rw-r--r--. 2 boinc boinc     15667 May  3 18:35 start_atlas.sh
[2026-05-03 21:12:29] -rw-r--r--. 2 boinc boinc    697394 May  3 18:35 input.tar.gz
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc 174416726 May  3 21:11 HITS.pool.root.1
[2026-05-03 21:12:29] -rw-------. 1 boinc boinc   1259520 May  3 21:12 result.tar.gz
21:12:31 (9832): run_atlas exited; CPU time 42036.834418
21:12:31 (9832): called boinc_finish(0)

</stderr_txt>
]]>

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