Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:11:38 (2695657): wrapper (7.7.26015): starting
03:11:38 (2695657): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 03:11:38] Arguments: --nthreads 4
[2026-05-04 03:11:38] Threads: 4
[2026-05-04 03:11:38] Checking for CVMFS
[2026-05-04 03:11:38] No cvmfs_config command found, will try listing directly
[2026-05-04 03:11:38] CVMFS is ok
[2026-05-04 03:11:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 03:11:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 03:11:38] Further information can be found at the LHC@home message board.
[2026-05-04 03:11:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 03:11:38] Checking for apptainer binary...
[2026-05-04 03:11:38] which: no apptainer in ((null))
[2026-05-04 03:11:38] apptainer is not installed, using version from CVMFS
[2026-05-04 03:11:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 03:11:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot24/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2026-05-04 03:11:38] apptainer works
[2026-05-04 03:11:38] Set ATHENA_PROC_NUMBER=4
[2026-05-04 03:11:38] Set ATHENA_CORE_NUMBER=4
[2026-05-04 03:11:38] Starting ATLAS job with PandaID=7127726681
[2026-05-04 03:11:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot24/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 05:45:16]  *** The last 200 lines of the pilot log: ***
[2026-05-04 05:45:16] 2026-05-04 03:44:33,181 | INFO     | PID=2699834 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-04 05:45:16] 2026-05-04 03:44:33,181 | INFO     | .. there are 11 such processes running
[2026-05-04 05:45:16] 2026-05-04 03:44:33,744 | INFO     | job 7127726681 has state=finished
[2026-05-04 05:45:16] 2026-05-04 03:44:33,744 | INFO     | preparing for final server update for job 7127726681 in state='finished'
[2026-05-04 05:45:16] 2026-05-04 03:44:33,745 | INFO     | reading metadata from: /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7127726681/jobReport.json
[2026-05-04 05:45:16] 2026-05-04 03:44:33,749 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot24/slots/5/workernode_map.json
[2026-05-04 05:45:16] 2026-05-04 03:44:33,749 | INFO     | this job has now completed (state=finished)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,750 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,750 | INFO     | log transfer has been attempted: DONE
[2026-05-04 05:45:16] 2026-05-04 03:44:33,750 | INFO     | job 7127726681 has finished - writing final server update
[2026-05-04 05:45:16] 2026-05-04 03:44:33,750 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2927670/.job.ad'
[2026-05-04 05:45:16] 2026-05-04 03:44:33,750 | INFO     | total number of processed events: 400 (read)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,763 | INFO     | using path: /var/lib/boinc/var/slot24/slots/5/PanDA_Pilot-7127726681/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,763 | INFO     | extracted standard info from prmon json
[2026-05-04 05:45:16] 2026-05-04 03:44:33,763 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 05:45:16] 2026-05-04 03:44:33,764 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 05:45:16] 2026-05-04 03:44:33,764 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 05:45:16] 2026-05-04 03:44:33,767 | INFO     | fitting pss+swap vs Time
[2026-05-04 05:45:16] 2026-05-04 03:44:33,767 | INFO     | sum of square deviations: 1046484737.5
[2026-05-04 05:45:16] 2026-05-04 03:44:33,768 | INFO     | sum of deviations: 4472392936.999999
[2026-05-04 05:45:16] 2026-05-04 03:44:33,768 | INFO     | mean x (centered): 0.0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,768 | INFO     | mean y: 2351443.986666667
[2026-05-04 05:45:16] 2026-05-04 03:44:33,768 | INFO     | intersect: 2351443.986666667
[2026-05-04 05:45:16] 2026-05-04 03:44:33,769 | INFO     | chi2: 1.4831809104751845
[2026-05-04 05:45:16] 2026-05-04 03:44:33,769 | INFO     | sum of square deviations: 945282840.0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,770 | INFO     | sum of deviations: 4599760693.000008
[2026-05-04 05:45:16] 2026-05-04 03:44:33,770 | INFO     | mean x (centered): 0.0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,770 | INFO     | mean y: 2351636.4896551725
[2026-05-04 05:45:16] 2026-05-04 03:44:33,770 | INFO     | intersect: 2351636.4896551725
[2026-05-04 05:45:16] 2026-05-04 03:44:33,770 | INFO     | chi2: 1.4845743825515938
[2026-05-04 05:45:16] 2026-05-04 03:44:33,770 | INFO     | current chi2=1.4845743825515938 (change=-0.09395159191759225 %)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,770 | INFO     | right removable region: 144
[2026-05-04 05:45:16] 2026-05-04 03:44:33,771 | INFO     | sum of square deviations: 945282840.0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,771 | INFO     | sum of deviations: -17030441648.0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,772 | INFO     | mean x (centered): 0.0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,772 | INFO     | mean y: 2383375.475862069
[2026-05-04 05:45:16] 2026-05-04 03:44:33,772 | INFO     | intersect: 2383375.475862069
[2026-05-04 05:45:16] 2026-05-04 03:44:33,772 | INFO     | chi2: 0.04022147457751331
[2026-05-04 05:45:16] 2026-05-04 03:44:33,772 | INFO     | current chi2=0.04022147457751331 (change=97.28816125575489 %)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,772 | INFO     | sum of square deviations: 850825255.0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,773 | INFO     | sum of deviations: -16782072888.999998
[2026-05-04 05:45:16] 2026-05-04 03:44:33,773 | INFO     | mean x (centered): 0.0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,773 | INFO     | mean y: 2382935.8571428573
[2026-05-04 05:45:16] 2026-05-04 03:44:33,773 | INFO     | intersect: 2382935.8571428573
[2026-05-04 05:45:16] 2026-05-04 03:44:33,774 | INFO     | chi2: 0.03252048989842975
[2026-05-04 05:45:16] 2026-05-04 03:44:33,774 | INFO     | current chi2=0.03252048989842975 (change=19.14645039739285 %)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,774 | INFO     | left removable region: 10
[2026-05-04 05:45:16] 2026-05-04 03:44:33,774 | INFO     | sum of square deviations: 746051197.5
[2026-05-04 05:45:16] 2026-05-04 03:44:33,775 | INFO     | sum of deviations: -15809820729.0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,775 | INFO     | mean x (centered): 0.0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,775 | INFO     | mean y: 2384637.119402985
[2026-05-04 05:45:16] 2026-05-04 03:44:33,775 | INFO     | intersect: 2384637.119402985
[2026-05-04 05:45:16] 2026-05-04 03:44:33,775 | INFO     | chi2: 0.030207628813580273
[2026-05-04 05:45:16] 2026-05-04 03:44:33,775 | INFO     | current memory leak: -21.19 B/s (using 134 data points, chi2=0.03)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,776 | INFO     | could have reported an average CPU frequency of 2570 MHz (9 samples)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,776 | INFO     | ..............................
[2026-05-04 05:45:16] 2026-05-04 03:44:33,776 | INFO     | . Timing measurements:
[2026-05-04 05:45:16] 2026-05-04 03:44:33,776 | INFO     | . get job = 0 s
[2026-05-04 05:45:16] 2026-05-04 03:44:33,776 | INFO     | . initial setup = 6 s
[2026-05-04 05:45:16] 2026-05-04 03:44:33,776 | INFO     | . payload setup = 10 s
[2026-05-04 05:45:16] 2026-05-04 03:44:33,776 | INFO     | . stage-in = 0 s
[2026-05-04 05:45:16] 2026-05-04 03:44:33,776 | INFO     | . payload execution = 9128 s
[2026-05-04 05:45:16] 2026-05-04 03:44:33,777 | INFO     | . stage-out = 0 s
[2026-05-04 05:45:16] 2026-05-04 03:44:33,777 | INFO     | . log creation = 0 s
[2026-05-04 05:45:16] 2026-05-04 03:44:33,777 | INFO     | ..............................
[2026-05-04 05:45:16] 2026-05-04 03:44:33,873 | INFO     | 
[2026-05-04 05:45:16] 2026-05-04 03:44:33,874 | INFO     | job summary report
[2026-05-04 05:45:16] 2026-05-04 03:44:33,874 | INFO     | --------------------------------------------------
[2026-05-04 05:45:16] 2026-05-04 03:44:33,874 | INFO     | PanDA job id: 7127726681
[2026-05-04 05:45:16] 2026-05-04 03:44:33,874 | INFO     | task id: 50010719
[2026-05-04 05:45:16] 2026-05-04 03:44:33,874 | INFO     | errors: (none)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,874 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 05:45:16] 2026-05-04 03:44:33,874 | INFO     | pilot state: finished 
[2026-05-04 05:45:16] 2026-05-04 03:44:33,874 | INFO     | transexitcode: 0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,874 | INFO     | exeerrorcode: 0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,874 | INFO     | exeerrordiag: 
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | exitcode: 0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | exitmsg: OK
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | cpuconsumptiontime: 35125 s
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | nevents: 400
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | neventsw: 0
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | pid: 2704676
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | pgrp: 2704676
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | corecount: 4
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | event service: False
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | sizes: {0: 2275279, 1: 2277108, 11: 2277108, 9142: 2305337, 9143: 2314357, 9144: 2314413, 9146: 2314799}
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | --------------------------------------------------
[2026-05-04 05:45:16] 2026-05-04 03:44:33,875 | INFO     | 
[2026-05-04 05:45:16] 2026-05-04 03:44:33,876 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot24/slots/5
[2026-05-04 05:45:16] 2026-05-04 03:44:33,896 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,897 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,897 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,897 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,899 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,899 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 05:45:16] 2026-05-04 03:44:33,899 | INFO     | job 7127726681 has completed (purged errors)
[2026-05-04 05:45:16] 2026-05-04 03:44:33,899 | INFO     | overall cleanup function is called
[2026-05-04 05:45:16] 2026-05-04 03:44:34,903 | INFO     | --- collectZombieJob: --- 10, [2704676]
[2026-05-04 05:45:16] 2026-05-04 03:44:34,903 | INFO     | zombie collector waiting for pid 2704676
[2026-05-04 05:45:16] 2026-05-04 03:44:34,903 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 05:45:16] 2026-05-04 03:44:34,903 | INFO     | collected zombie processes
[2026-05-04 05:45:16] 2026-05-04 03:44:34,903 | INFO     | will attempt to kill all subprocesses of pid=2704676
[2026-05-04 05:45:16] 2026-05-04 03:44:35,204 | INFO     | process IDs to be killed: [2704676] (in reverse order)
[2026-05-04 05:45:16] 2026-05-04 03:44:35,316 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 05:45:16] 2026-05-04 03:44:35,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 05:45:16] 2026-05-04 03:44:35,328 | INFO     | did not find any defunct processes belonging to 2704676
[2026-05-04 05:45:16] 2026-05-04 03:44:35,338 | INFO     | did not find any defunct processes belonging to 2704676
[2026-05-04 05:45:16] 2026-05-04 03:44:35,338 | INFO     | Ready for new job
[2026-05-04 05:45:16] 2026-05-04 03:44:35,340 | INFO     | ***************************************
[2026-05-04 05:45:16] 2026-05-04 03:44:35,341 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 05:45:16] 2026-05-04 03:44:35,341 | INFO     | ***************************************
[2026-05-04 05:45:16] 2026-05-04 03:44:35,341 | INFO     | 
[2026-05-04 05:45:16] 2026-05-04 03:44:35,345 | INFO     | architecture information:
[2026-05-04 05:45:16] 2026-05-04 03:44:35,345 | INFO     | executing command: cat /etc/os-release
[2026-05-04 05:45:16] 2026-05-04 03:44:35,359 | INFO     | cat /etc/os-release:
[2026-05-04 05:45:16] NAME="CentOS Linux"
[2026-05-04 05:45:16] VERSION="7 (Core)"
[2026-05-04 05:45:16] ID="centos"
[2026-05-04 05:45:16] ID_LIKE="rhel fedora"
[2026-05-04 05:45:16] VERSION_ID="7"
[2026-05-04 05:45:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 05:45:16] ANSI_COLOR="0;31"
[2026-05-04 05:45:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 05:45:16] HOME_URL="https://www.centos.org/"
[2026-05-04 05:45:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 05:45:16] 
[2026-05-04 05:45:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 05:45:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 05:45:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 05:45:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 05:45:16] 
[2026-05-04 05:45:16] 2026-05-04 03:44:35,360 | INFO     | ***************************************
[2026-05-04 05:45:16] 2026-05-04 03:44:35,863 | INFO     | executing command: df -mP /var/lib/boinc/var/slot24/slots/5
[2026-05-04 05:45:16] 2026-05-04 03:44:35,879 | INFO     | sufficient remaining disk space (49157242880 B)
[2026-05-04 05:45:16] 2026-05-04 03:44:35,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 05:45:16] 2026-05-04 03:44:35,880 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 05:45:16] 2026-05-04 03:44:35,880 | INFO     | update_server=False
[2026-05-04 05:45:16] 2026-05-04 03:44:35,880 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 05:45:16] 2026-05-04 03:44:35,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 05:45:16] 2026-05-04 03:44:35,880 | INFO     | aborting loop
[2026-05-04 05:45:16] 2026-05-04 03:44:36,703 | INFO     | all payload control threads have been joined
[2026-05-04 05:45:16] 2026-05-04 03:44:36,784 | INFO     | all data control threads have been joined
[2026-05-04 05:45:16] 2026-05-04 03:44:36,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 05:45:16] 2026-05-04 03:44:36,885 | INFO     | [job] retrieve thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:36,886 | INFO     | [job] job monitor thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:36,889 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:36,889 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:37,017 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:37,393 | INFO     | all job control threads have been joined
[2026-05-04 05:45:16] 2026-05-04 03:44:37,426 | INFO     | [data] copytool_in thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:37,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 05:45:16] 2026-05-04 03:44:37,708 | INFO     | [payload] control thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:37,716 | INFO     | [payload] failed_post thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:37,790 | INFO     | [data] control thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:37,805 | INFO     | [payload] validate_post thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:37,875 | INFO     | [job] validate thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:38,399 | INFO     | [job] control thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:38,817 | INFO     | [data] copytool_out thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:38,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 05:45:16] 2026-05-04 03:44:39,889 | INFO     | [job] queue monitor thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:41,672 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:44:46,373 | INFO     | job.realtimelogging is not enabled
[2026-05-04 05:45:16] 2026-05-04 03:44:47,378 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 05:45:16] 2026-05-04 03:45:05,672 | INFO     | PID=2699834 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 05:45:16] 2026-05-04 03:45:05,672 | INFO     | .. there are 11 such processes running
[2026-05-04 05:45:16] 2026-05-04 03:45:05,672 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 05:45:16] 2026-05-04 03:45:05,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 05:45:16] 2026-05-04 03:45:05,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 05:45:16] 2026-05-04 03:45:10,434 | INFO     | [monitor] cgroup control has ended
[2026-05-04 05:45:16] 2026-05-04 03:45:11,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22911842125632)>', '<ExcThread(monitor, started 22911605024512)>']
[2026-05-04 05:45:16] 2026-05-04 03:45:11,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 05:45:16] 2026-05-04 03:45:11,702 | INFO     | [monitor] control thread has ended
[2026-05-04 05:45:16] 2026-05-04 03:45:16,441 | INFO     | all workflow threads have been joined
[2026-05-04 05:45:16] 2026-05-04 03:45:16,441 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 05:45:16] 2026-05-04 03:45:16,442 | INFO     | traces error code: 0
[2026-05-04 05:45:16] 2026-05-04 03:45:16,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 05:45:16] 2026-05-04 03:45:16,606 [wrapper] ==== pilot stdout END ====
[2026-05-04 05:45:16] 2026-05-04 03:45:16,608 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 05:45:16] 2026-05-04 03:45:16,611 [wrapper] pilotpid: 2699834
[2026-05-04 05:45:16] 2026-05-04 03:45:16,613 [wrapper] Pilot exit status: 0
[2026-05-04 05:45:16] 2026-05-04 03:45:16,622 [wrapper] pandaids: 7127726681
[2026-05-04 05:45:16] 2026-05-04 03:45:16,692 [wrapper] cleanup supervisor_pilot 2905300 2699835
[2026-05-04 05:45:16] 2026-05-04 03:45:16,695 [wrapper] Test setup, not cleaning
[2026-05-04 05:45:16] 2026-05-04 03:45:16,697 [wrapper] apfmon messages muted
[2026-05-04 05:45:16] 2026-05-04 03:45:16,700 [wrapper] ==== wrapper stdout END ====
[2026-05-04 05:45:16] 2026-05-04 03:45:16,702 [wrapper] ==== wrapper stderr END ====
[2026-05-04 05:45:16]  *** Error codes and diagnostics ***
[2026-05-04 05:45:16]     "exeErrorCode": 0,
[2026-05-04 05:45:16]     "pilotErrorCode": 0,
[2026-05-04 05:45:16]  *** Listing of results directory ***
[2026-05-04 05:45:16] total 411452
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc    683926 May  3 13:53 pilot3.tar.gz
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc      5631 May  3 14:22 queuedata.json
[2026-05-04 05:45:16] -rwx------. 1 boinc boinc     36322 May  3 14:22 runpilot2-wrapper.sh
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc       100 May  4 03:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 05:45:16] -rwxr-xr-x. 1 boinc boinc      7986 May  4 03:11 run_atlas
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc       105 May  4 03:11 job.xml
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc      6482 May  4 03:11 init_data.xml
[2026-05-04 05:45:16] -rw-r--r--. 2 boinc boinc 247630455 May  4 03:11 EVNT.50010716._000009.pool.root.1
[2026-05-04 05:45:16] -rw-r--r--. 2 boinc boinc     15667 May  4 03:11 start_atlas.sh
[2026-05-04 05:45:16] drwxrwx--x. 2 boinc boinc      4096 May  4 03:11 shared
[2026-05-04 05:45:16] -rw-r--r--. 2 boinc boinc    697394 May  4 03:11 input.tar.gz
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc         0 May  4 03:11 boinc_lockfile
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc      2516 May  4 03:11 pandaJob.out
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc   1003025 May  4 03:11 agis_schedconf.cvmfs.json
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc   1508687 May  4 03:11 agis_ddmendpoints.agis.ALL.json
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc       447 May  4 03:11 workernode_map.json
[2026-05-04 05:45:16] drwx------. 5 boinc boinc      4096 May  4 03:11 pilot3
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc       487 May  4 05:44 boinc_task_state.xml
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc 167200430 May  4 05:44 HITS.50010719._000120.pool.root.1
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc        95 May  4 05:44 pilot_heartbeat.json
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc      1032 May  4 05:44 memory_monitor_summary.json
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc    296125 May  4 05:44 log.50010719._000120.job.log.tgz.1
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc      6413 May  4 05:44 heartbeat_new.json
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc      6304 May  4 05:44 heartbeat.json
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc      8192 May  4 05:45 boinc_mmap_file
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc        27 May  4 05:45 wrapper_checkpoint.txt
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc      4904 May  4 05:45 pilotlog.txt
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc    880599 May  4 05:45 log.50010719._000120.job.log.1
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc       357 May  4 05:45 output.list
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc       410 May  4 05:45 runtime_log
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc   1198080 May  4 05:45 result.tar.gz
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc      8827 May  4 05:45 runtime_log.err
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc       662 May  4 05:45 3e16dd7d47d4.diag
[2026-05-04 05:45:16] -rw-r--r--. 1 boinc boinc     21120 May  4 05:45 stderr.txt
[2026-05-04 05:45:16] HITS file was successfully produced:
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc 167200430 May  4 05:44 shared/HITS.pool.root.1
[2026-05-04 05:45:16]  *** Contents of shared directory: ***
[2026-05-04 05:45:16] total 406992
[2026-05-04 05:45:16] -rw-r--r--. 2 boinc boinc 247630455 May  4 03:11 ATLAS.root_0
[2026-05-04 05:45:16] -rw-r--r--. 2 boinc boinc     15667 May  4 03:11 start_atlas.sh
[2026-05-04 05:45:16] -rw-r--r--. 2 boinc boinc    697394 May  4 03:11 input.tar.gz
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc 167200430 May  4 05:44 HITS.pool.root.1
[2026-05-04 05:45:16] -rw-------. 1 boinc boinc   1198080 May  4 05:45 result.tar.gz
05:45:18 (2695657): run_atlas exited; CPU time 35447.994136
05:45:18 (2695657): called boinc_finish(0)

</stderr_txt>
]]>

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