Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:35:08 (3440511): wrapper (7.7.26015): starting
15:35:08 (3440511): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 15:35:08] Arguments: --nthreads 4
[2026-05-03 15:35:08] Threads: 4
[2026-05-03 15:35:08] Checking for CVMFS
[2026-05-03 15:35:08] No cvmfs_config command found, will try listing directly
[2026-05-03 15:35:08] CVMFS is ok
[2026-05-03 15:35:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 15:35:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 15:35:08] Further information can be found at the LHC@home message board.
[2026-05-03 15:35:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 15:35:08] Checking for apptainer binary...
[2026-05-03 15:35:08] which: no apptainer in ((null))
[2026-05-03 15:35:08] apptainer is not installed, using version from CVMFS
[2026-05-03 15:35:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 15:35:08] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot24/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-05-03 15:35:08] apptainer works
[2026-05-03 15:35:08] Set ATHENA_PROC_NUMBER=4
[2026-05-03 15:35:08] Set ATHENA_CORE_NUMBER=4
[2026-05-03 15:35:08] Starting ATLAS job with PandaID=7127241499
[2026-05-03 15:35:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot24/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 18:21:48]  *** The last 200 lines of the pilot log: ***
[2026-05-03 18:21:48] 2026-05-03 16:21:12,219 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-03 18:21:48] 2026-05-03 16:21:14,585 | INFO     | monitor loop #730: job 0:7127241499 is in state 'finished'
[2026-05-03 18:21:48] 2026-05-03 16:21:14,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,207 | INFO     | job 7127241499 has state=finished
[2026-05-03 18:21:48] 2026-05-03 16:21:15,208 | INFO     | preparing for final server update for job 7127241499 in state='finished'
[2026-05-03 18:21:48] 2026-05-03 16:21:15,208 | INFO     | reading metadata from: /var/lib/boinc/var/slot24/slots/3/PanDA_Pilot-7127241499/jobReport.json
[2026-05-03 18:21:48] 2026-05-03 16:21:15,211 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot24/slots/3/workernode_map.json
[2026-05-03 18:21:48] 2026-05-03 16:21:15,211 | INFO     | this job has now completed (state=finished)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,212 | INFO     | log transfer has been attempted: DONE
[2026-05-03 18:21:48] 2026-05-03 16:21:15,212 | INFO     | job 7127241499 has finished - writing final server update
[2026-05-03 18:21:48] 2026-05-03 16:21:15,212 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_267303/.job.ad'
[2026-05-03 18:21:48] 2026-05-03 16:21:15,212 | INFO     | total number of processed events: 400 (read)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,224 | INFO     | using path: /var/lib/boinc/var/slot24/slots/3/PanDA_Pilot-7127241499/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,225 | INFO     | extracted standard info from prmon json
[2026-05-03 18:21:48] 2026-05-03 16:21:15,225 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 18:21:48] 2026-05-03 16:21:15,225 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 18:21:48] 2026-05-03 16:21:15,225 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 18:21:48] 2026-05-03 16:21:15,228 | INFO     | fitting pss+swap vs Time
[2026-05-03 18:21:48] 2026-05-03 16:21:15,229 | INFO     | sum of square deviations: 1342841922.0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,230 | INFO     | sum of deviations: -20645793674.0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,230 | INFO     | mean x (centered): 0.0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,230 | INFO     | mean y: 2380018.306748466
[2026-05-03 18:21:48] 2026-05-03 16:21:15,230 | INFO     | intersect: 2380018.306748466
[2026-05-03 18:21:48] 2026-05-03 16:21:15,230 | INFO     | chi2: 1.544499451852494
[2026-05-03 18:21:48] 2026-05-03 16:21:15,231 | INFO     | sum of square deviations: 1223016419.5
[2026-05-03 18:21:48] 2026-05-03 16:21:15,232 | INFO     | sum of deviations: -19959810701.500008
[2026-05-03 18:21:48] 2026-05-03 16:21:15,232 | INFO     | mean x (centered): 0.0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,232 | INFO     | mean y: 2380900.0443037977
[2026-05-03 18:21:48] 2026-05-03 16:21:15,232 | INFO     | intersect: 2380900.0443037977
[2026-05-03 18:21:48] 2026-05-03 16:21:15,232 | INFO     | chi2: 1.538365094147428
[2026-05-03 18:21:48] 2026-05-03 16:21:15,232 | INFO     | current chi2=1.538365094147428 (change=0.39717448249711196 %)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,232 | INFO     | right removable region: 157
[2026-05-03 18:21:48] 2026-05-03 16:21:15,233 | INFO     | sum of square deviations: 1223016419.5
[2026-05-03 18:21:48] 2026-05-03 16:21:15,234 | INFO     | sum of deviations: -37470822854.50001
[2026-05-03 18:21:48] 2026-05-03 16:21:15,234 | INFO     | mean x (centered): 0.0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,234 | INFO     | mean y: 2400971.981012658
[2026-05-03 18:21:48] 2026-05-03 16:21:15,234 | INFO     | intersect: 2400971.981012658
[2026-05-03 18:21:48] 2026-05-03 16:21:15,234 | INFO     | chi2: 0.298346150317479
[2026-05-03 18:21:48] 2026-05-03 16:21:15,234 | INFO     | current chi2=0.298346150317479 (change=80.6833113498591 %)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,235 | INFO     | sum of square deviations: 1110539892.0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,235 | INFO     | sum of deviations: -31079812930.00002
[2026-05-03 18:21:48] 2026-05-03 16:21:15,236 | INFO     | mean x (centered): 0.0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,236 | INFO     | mean y: 2392277.091503268
[2026-05-03 18:21:48] 2026-05-03 16:21:15,236 | INFO     | intersect: 2392277.091503268
[2026-05-03 18:21:48] 2026-05-03 16:21:15,236 | INFO     | chi2: 0.2829613882986893
[2026-05-03 18:21:48] 2026-05-03 16:21:15,236 | INFO     | current chi2=0.2829613882986893 (change=5.156681928832787 %)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,236 | INFO     | left removable region: 10
[2026-05-03 18:21:48] 2026-05-03 16:21:15,236 | INFO     | sum of square deviations: 984941258.0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,237 | INFO     | sum of deviations: -29904417228.000004
[2026-05-03 18:21:48] 2026-05-03 16:21:15,237 | INFO     | mean x (centered): 0.0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,237 | INFO     | mean y: 2394003.095238095
[2026-05-03 18:21:48] 2026-05-03 16:21:15,237 | INFO     | intersect: 2394003.095238095
[2026-05-03 18:21:48] 2026-05-03 16:21:15,238 | INFO     | chi2: 0.273661729628261
[2026-05-03 18:21:48] 2026-05-03 16:21:15,238 | INFO     | current memory leak: -30.36 B/s (using 147 data points, chi2=0.27)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,238 | INFO     | could have reported an average CPU frequency of 2567 MHz (9 samples)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,239 | INFO     | ..............................
[2026-05-03 18:21:48] 2026-05-03 16:21:15,239 | INFO     | . Timing measurements:
[2026-05-03 18:21:48] 2026-05-03 16:21:15,239 | INFO     | . get job = 0 s
[2026-05-03 18:21:48] 2026-05-03 16:21:15,239 | INFO     | . initial setup = 6 s
[2026-05-03 18:21:48] 2026-05-03 16:21:15,239 | INFO     | . payload setup = 10 s
[2026-05-03 18:21:48] 2026-05-03 16:21:15,239 | INFO     | . stage-in = 0 s
[2026-05-03 18:21:48] 2026-05-03 16:21:15,239 | INFO     | . payload execution = 9915 s
[2026-05-03 18:21:48] 2026-05-03 16:21:15,239 | INFO     | . stage-out = 1 s
[2026-05-03 18:21:48] 2026-05-03 16:21:15,239 | INFO     | . log creation = 0 s
[2026-05-03 18:21:48] 2026-05-03 16:21:15,239 | INFO     | ..............................
[2026-05-03 18:21:48] 2026-05-03 16:21:15,348 | INFO     | 
[2026-05-03 18:21:48] 2026-05-03 16:21:15,348 | INFO     | job summary report
[2026-05-03 18:21:48] 2026-05-03 16:21:15,348 | INFO     | --------------------------------------------------
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | PanDA job id: 7127241499
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | task id: 50010727
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | errors: (none)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | pilot state: finished 
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | transexitcode: 0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | exeerrorcode: 0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | exeerrordiag: 
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | exitcode: 0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | exitmsg: OK
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | cpuconsumptiontime: 37654 s
[2026-05-03 18:21:48] 2026-05-03 16:21:15,349 | INFO     | nevents: 400
[2026-05-03 18:21:48] 2026-05-03 16:21:15,350 | INFO     | neventsw: 0
[2026-05-03 18:21:48] 2026-05-03 16:21:15,350 | INFO     | pid: 3449588
[2026-05-03 18:21:48] 2026-05-03 16:21:15,350 | INFO     | pgrp: 3449588
[2026-05-03 18:21:48] 2026-05-03 16:21:15,350 | INFO     | corecount: 4
[2026-05-03 18:21:48] 2026-05-03 16:21:15,350 | INFO     | event service: False
[2026-05-03 18:21:48] 2026-05-03 16:21:15,350 | INFO     | sizes: {0: 2275356, 1: 2277185, 12: 2277185, 9929: 2305677, 9931: 2314697, 9934: 2314753, 9937: 2315139}
[2026-05-03 18:21:48] 2026-05-03 16:21:15,350 | INFO     | --------------------------------------------------
[2026-05-03 18:21:48] 2026-05-03 16:21:15,350 | INFO     | 
[2026-05-03 18:21:48] 2026-05-03 16:21:15,350 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot24/slots/3
[2026-05-03 18:21:48] 2026-05-03 16:21:15,380 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,381 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,381 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,381 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,382 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 18:21:48] 2026-05-03 16:21:15,383 | INFO     | job 7127241499 has completed (purged errors)
[2026-05-03 18:21:48] 2026-05-03 16:21:15,383 | INFO     | overall cleanup function is called
[2026-05-03 18:21:48] 2026-05-03 16:21:16,390 | INFO     | --- collectZombieJob: --- 10, [3449588]
[2026-05-03 18:21:48] 2026-05-03 16:21:16,390 | INFO     | zombie collector waiting for pid 3449588
[2026-05-03 18:21:48] 2026-05-03 16:21:16,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 18:21:48] 2026-05-03 16:21:16,391 | INFO     | collected zombie processes
[2026-05-03 18:21:48] 2026-05-03 16:21:16,391 | INFO     | will attempt to kill all subprocesses of pid=3449588
[2026-05-03 18:21:48] 2026-05-03 16:21:16,737 | INFO     | process IDs to be killed: [3449588] (in reverse order)
[2026-05-03 18:21:48] 2026-05-03 16:21:16,927 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 18:21:48] 2026-05-03 16:21:16,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 18:21:48] 2026-05-03 16:21:16,945 | INFO     | did not find any defunct processes belonging to 3449588
[2026-05-03 18:21:48] 2026-05-03 16:21:16,957 | INFO     | did not find any defunct processes belonging to 3449588
[2026-05-03 18:21:48] 2026-05-03 16:21:16,958 | INFO     | Ready for new job
[2026-05-03 18:21:48] 2026-05-03 16:21:16,960 | INFO     | ***************************************
[2026-05-03 18:21:48] 2026-05-03 16:21:16,960 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 18:21:48] 2026-05-03 16:21:16,960 | INFO     | ***************************************
[2026-05-03 18:21:48] 2026-05-03 16:21:16,960 | INFO     | 
[2026-05-03 18:21:48] 2026-05-03 16:21:16,964 | INFO     | architecture information:
[2026-05-03 18:21:48] 2026-05-03 16:21:16,964 | INFO     | executing command: cat /etc/os-release
[2026-05-03 18:21:48] 2026-05-03 16:21:16,986 | INFO     | cat /etc/os-release:
[2026-05-03 18:21:48] NAME="CentOS Linux"
[2026-05-03 18:21:48] VERSION="7 (Core)"
[2026-05-03 18:21:48] ID="centos"
[2026-05-03 18:21:48] ID_LIKE="rhel fedora"
[2026-05-03 18:21:48] VERSION_ID="7"
[2026-05-03 18:21:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 18:21:48] ANSI_COLOR="0;31"
[2026-05-03 18:21:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 18:21:48] HOME_URL="https://www.centos.org/"
[2026-05-03 18:21:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 18:21:48] 
[2026-05-03 18:21:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 18:21:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 18:21:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 18:21:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 18:21:48] 
[2026-05-03 18:21:48] 2026-05-03 16:21:16,987 | INFO     | ***************************************
[2026-05-03 18:21:48] 2026-05-03 16:21:17,489 | INFO     | executing command: df -mP /var/lib/boinc/var/slot24/slots/3
[2026-05-03 18:21:48] 2026-05-03 16:21:17,509 | INFO     | sufficient remaining disk space (48930750464 B)
[2026-05-03 18:21:48] 2026-05-03 16:21:17,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 18:21:48] 2026-05-03 16:21:17,510 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 18:21:48] 2026-05-03 16:21:17,510 | INFO     | update_server=False
[2026-05-03 18:21:48] 2026-05-03 16:21:17,510 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 18:21:48] 2026-05-03 16:21:17,510 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 18:21:48] 2026-05-03 16:21:17,607 | INFO     | all payload control threads have been joined
[2026-05-03 18:21:48] 2026-05-03 16:21:18,084 | INFO     | all data control threads have been joined
[2026-05-03 18:21:48] 2026-05-03 16:21:18,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 18:21:48] 2026-05-03 16:21:18,093 | INFO     | aborting loop
[2026-05-03 18:21:48] 2026-05-03 16:21:18,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 18:21:48] 2026-05-03 16:21:18,515 | INFO     | [job] retrieve thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:18,612 | INFO     | [payload] control thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:18,678 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:18,796 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:18,855 | INFO     | [job] validate thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:19,076 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:19,089 | INFO     | [data] control thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:19,098 | INFO     | [job] job monitor thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:19,207 | INFO     | all job control threads have been joined
[2026-05-03 18:21:48] 2026-05-03 16:21:19,415 | INFO     | [data] copytool_in thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:19,508 | INFO     | [payload] failed_post thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:19,515 | INFO     | [data] copytool_out thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:19,692 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:19,791 | INFO     | [payload] validate_post thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:20,212 | INFO     | [job] control thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:20,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 18:21:48] 2026-05-03 16:21:21,362 | INFO     | [job] queue monitor thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:22,331 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 18:21:48] 2026-05-03 16:21:42,162 | INFO     | [monitor] cgroup control has ended
[2026-05-03 18:21:48] 2026-05-03 16:21:42,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23436474599232)>', '<ExcThread(monitor, started 23436241159936)>']
[2026-05-03 18:21:48] 2026-05-03 16:21:47,869 | INFO     | all workflow threads have been joined
[2026-05-03 18:21:48] 2026-05-03 16:21:47,869 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 18:21:48] 2026-05-03 16:21:47,870 | INFO     | traces error code: 0
[2026-05-03 18:21:48] 2026-05-03 16:21:47,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 18:21:48] 2026-05-03 16:21:48,558 | INFO     | PID=3444639 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 18:21:48] 2026-05-03 16:21:48,559 | INFO     | .. there are 13 such processes running
[2026-05-03 18:21:48] 2026-05-03 16:21:48,560 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 18:21:48] 2026-05-03 16:21:48,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 18:21:48] 2026-05-03 16:21:48,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 18:21:48] 2026-05-03 16:21:48,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 18:21:48] 2026-05-03 16:21:48,561 | INFO     | [monitor] control thread has ended
[2026-05-03 18:21:48] 2026-05-03 16:21:48,716 [wrapper] ==== pilot stdout END ====
[2026-05-03 18:21:48] 2026-05-03 16:21:48,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 18:21:48] 2026-05-03 16:21:48,726 [wrapper] pilotpid: 3444639
[2026-05-03 18:21:48] 2026-05-03 16:21:48,729 [wrapper] Pilot exit status: 0
[2026-05-03 18:21:48] 2026-05-03 16:21:48,804 [wrapper] pandaids: 7127241499
[2026-05-03 18:21:48] 2026-05-03 16:21:48,881 [wrapper] cleanup supervisor_pilot 3724512 3444640
[2026-05-03 18:21:48] 2026-05-03 16:21:48,885 [wrapper] Test setup, not cleaning
[2026-05-03 18:21:48] 2026-05-03 16:21:48,887 [wrapper] apfmon messages muted
[2026-05-03 18:21:48] 2026-05-03 16:21:48,890 [wrapper] ==== wrapper stdout END ====
[2026-05-03 18:21:48] 2026-05-03 16:21:48,892 [wrapper] ==== wrapper stderr END ====
[2026-05-03 18:21:48]  *** Error codes and diagnostics ***
[2026-05-03 18:21:48]     "exeErrorCode": 0,
[2026-05-03 18:21:48]     "pilotErrorCode": 0,
[2026-05-03 18:21:48]  *** Listing of results directory ***
[2026-05-03 18:21:48] total 411292
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc    683926 May  3 05:02 pilot3.tar.gz
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc      5631 May  3 05:41 queuedata.json
[2026-05-03 18:21:48] -rwx------. 1 boinc boinc     36322 May  3 05:44 runpilot2-wrapper.sh
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc       100 May  3 15:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 18:21:48] -rwxr-xr-x. 1 boinc boinc      7986 May  3 15:35 run_atlas
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc       105 May  3 15:35 job.xml
[2026-05-03 18:21:48] -rw-r--r--. 2 boinc boinc 247375775 May  3 15:35 EVNT.50010725._000080.pool.root.1
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc      6482 May  3 15:35 init_data.xml
[2026-05-03 18:21:48] -rw-r--r--. 2 boinc boinc     15667 May  3 15:35 start_atlas.sh
[2026-05-03 18:21:48] drwxrwx--x. 2 boinc boinc      4096 May  3 15:35 shared
[2026-05-03 18:21:48] -rw-r--r--. 2 boinc boinc    697417 May  3 15:35 input.tar.gz
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc         0 May  3 15:35 boinc_lockfile
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc      2573 May  3 15:35 pandaJob.out
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc   1002987 May  3 15:35 agis_schedconf.cvmfs.json
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc   1508687 May  3 15:35 agis_ddmendpoints.agis.ALL.json
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc       452 May  3 15:35 workernode_map.json
[2026-05-03 18:21:48] drwx------. 5 boinc boinc      4096 May  3 15:35 pilot3
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc 167191518 May  3 18:20 HITS.50010727._001567.pool.root.1
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc       487 May  3 18:20 boinc_task_state.xml
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc      1031 May  3 18:21 memory_monitor_summary.json
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc    283081 May  3 18:21 log.50010727._001567.job.log.tgz.1
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc      6414 May  3 18:21 heartbeat_new.json
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc      6305 May  3 18:21 heartbeat.json
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc      8192 May  3 18:21 boinc_mmap_file
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc        27 May  3 18:21 wrapper_checkpoint.txt
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc        95 May  3 18:21 pilot_heartbeat.json
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc       823 May  3 18:21 pilotlog.txt
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc    945813 May  3 18:21 log.50010727._001567.job.log.1
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc       357 May  3 18:21 output.list
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc       410 May  3 18:21 runtime_log
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc   1249280 May  3 18:21 result.tar.gz
[2026-05-03 18:21:48] -rw-------. 1 boinc boinc       663 May  3 18:21 c48704b41e6d.diag
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc      8827 May  3 18:21 runtime_log.err
[2026-05-03 18:21:48] -rw-r--r--. 1 boinc boinc     21089 May  3 18:21 stderr.txt
[2026-05-03 18:21:49] HITS file was successfully produced:
[2026-05-03 18:21:49] -rw-------. 1 boinc boinc 167191518 May  3 18:20 shared/HITS.pool.root.1
[2026-05-03 18:21:49]  *** Contents of shared directory: ***
[2026-05-03 18:21:49] total 406784
[2026-05-03 18:21:49] -rw-r--r--. 2 boinc boinc 247375775 May  3 15:35 ATLAS.root_0
[2026-05-03 18:21:49] -rw-r--r--. 2 boinc boinc     15667 May  3 15:35 start_atlas.sh
[2026-05-03 18:21:49] -rw-r--r--. 2 boinc boinc    697417 May  3 15:35 input.tar.gz
[2026-05-03 18:21:49] -rw-------. 1 boinc boinc 167191518 May  3 18:20 HITS.pool.root.1
[2026-05-03 18:21:49] -rw-------. 1 boinc boinc   1249280 May  3 18:21 result.tar.gz
18:21:50 (3440511): run_atlas exited; CPU time 37986.928911
18:21:50 (3440511): called boinc_finish(0)

</stderr_txt>
]]>

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