Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:38:34 (19353): wrapper (7.7.26015): starting
03:38:34 (19353): wrapper: running run_atlas (--nthreads 8)
[2026-05-03 03:38:34] Arguments: --nthreads 8
[2026-05-03 03:38:34] Threads: 8
[2026-05-03 03:38:34] Checking for CVMFS
[2026-05-03 03:38:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-03 03:38:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-03 03:38:38] Running cvmfs_config stat atlas.cern.ch
[2026-05-03 03:38:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-03 03:38:40] 2.11.2.0 11840 24980 102060 159150 0 53 24387906 25165825 96 130560 0 9134135 99.918 6800349 9495 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-03 03:38:40] CVMFS is ok
[2026-05-03 03:38:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 03:38:40] Checking for apptainer binary...
[2026-05-03 03:38:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-03 03:38:40] Running /usr/bin/apptainer --version
[2026-05-03 03:38:40] apptainer version 1.3.2-1.el7
[2026-05-03 03:38:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 03:39:14] cg-vwn419.simple-grid.lan
[2026-05-03 03:39:14] apptainer works
[2026-05-03 03:39:15] Set ATHENA_PROC_NUMBER=8
[2026-05-03 03:39:15] Set ATHENA_CORE_NUMBER=8
[2026-05-03 03:39:15] Starting ATLAS job with PandaID=7126993677
[2026-05-03 03:39:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 06:56:49]  *** The last 200 lines of the pilot log: ***
[2026-05-03 06:56:49] 2026-05-03 04:55:36,852 | INFO     | this job has now completed (state=finished)
[2026-05-03 06:56:49] 2026-05-03 04:55:36,852 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 06:56:49] 2026-05-03 04:55:36,852 | INFO     | log transfer has been attempted: DONE
[2026-05-03 06:56:49] 2026-05-03 04:55:36,853 | INFO     | job 7126993677 has finished - writing final server update
[2026-05-03 06:56:49] 2026-05-03 04:55:36,853 | INFO     | total number of processed events: 400 (read)
[2026-05-03 06:56:49] 2026-05-03 04:55:36,855 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7126993677/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 06:56:49] 2026-05-03 04:55:36,856 | INFO     | extracted standard info from prmon json
[2026-05-03 06:56:49] 2026-05-03 04:55:36,856 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 06:56:49] 2026-05-03 04:55:36,856 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 06:56:49] 2026-05-03 04:55:36,856 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 06:56:49] 2026-05-03 04:55:36,860 | INFO     | fitting pss+swap vs Time
[2026-05-03 06:56:49] 2026-05-03 04:55:36,861 | INFO     | sum of square deviations: 1869302025.5
[2026-05-03 06:56:49] 2026-05-03 04:55:36,862 | INFO     | sum of deviations: 116686655268.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,862 | INFO     | mean x (centered): 0.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,862 | INFO     | mean y: 2378023.285714286
[2026-05-03 06:56:49] 2026-05-03 04:55:36,863 | INFO     | intersect: 2378023.285714286
[2026-05-03 06:56:49] 2026-05-03 04:55:36,863 | INFO     | chi2: 9.93994107194719
[2026-05-03 06:56:49] 2026-05-03 04:55:36,863 | INFO     | sum of square deviations: 1719429448.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,865 | INFO     | sum of deviations: 125016318910.99997
[2026-05-03 06:56:49] 2026-05-03 04:55:36,865 | INFO     | mean x (centered): 0.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,865 | INFO     | mean y: 2386224.7966101696
[2026-05-03 06:56:49] 2026-05-03 04:55:36,865 | INFO     | intersect: 2386224.7966101696
[2026-05-03 06:56:49] 2026-05-03 04:55:36,866 | INFO     | chi2: 9.28037443650337
[2026-05-03 06:56:49] 2026-05-03 04:55:36,866 | INFO     | current chi2=9.28037443650337 (change=6.635518567663036 %)
[2026-05-03 06:56:49] 2026-05-03 04:55:36,866 | INFO     | right removable region: 176
[2026-05-03 06:56:49] 2026-05-03 04:55:36,866 | INFO     | sum of square deviations: 1719429448.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,867 | INFO     | sum of deviations: 51384007824.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,868 | INFO     | mean x (centered): 0.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,868 | INFO     | mean y: 2444477.6779661016
[2026-05-03 06:56:49] 2026-05-03 04:55:36,868 | INFO     | intersect: 2444477.6779661016
[2026-05-03 06:56:49] 2026-05-03 04:55:36,868 | INFO     | chi2: 4.072511948328607
[2026-05-03 06:56:49] 2026-05-03 04:55:36,868 | INFO     | current chi2=4.072511948328607 (change=59.028811953199835 %)
[2026-05-03 06:56:49] 2026-05-03 04:55:36,869 | INFO     | sum of square deviations: 1577789583.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,870 | INFO     | sum of deviations: 1997347186.499998
[2026-05-03 06:56:49] 2026-05-03 04:55:36,870 | INFO     | mean x (centered): 0.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,870 | INFO     | mean y: 2497570.6918604653
[2026-05-03 06:56:49] 2026-05-03 04:55:36,871 | INFO     | intersect: 2497570.6918604653
[2026-05-03 06:56:49] 2026-05-03 04:55:36,871 | INFO     | chi2: 1.0890070213666987
[2026-05-03 06:56:49] 2026-05-03 04:55:36,871 | INFO     | current chi2=1.0890070213666987 (change=73.25957455290865 %)
[2026-05-03 06:56:49] 2026-05-03 04:55:36,871 | INFO     | sum of square deviations: 1444149868.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,873 | INFO     | sum of deviations: -9051700879.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,873 | INFO     | mean x (centered): 0.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,873 | INFO     | mean y: 2510004.706586826
[2026-05-03 06:56:49] 2026-05-03 04:55:36,873 | INFO     | intersect: 2510004.706586826
[2026-05-03 06:56:49] 2026-05-03 04:55:36,873 | INFO     | chi2: 0.8283767739997747
[2026-05-03 06:56:49] 2026-05-03 04:55:36,873 | INFO     | current chi2=0.8283767739997747 (change=23.932834431116362 %)
[2026-05-03 06:56:49] 2026-05-03 04:55:36,874 | INFO     | left removable region: 15
[2026-05-03 06:56:49] 2026-05-03 04:55:36,874 | INFO     | sum of square deviations: 1294014960.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,875 | INFO     | sum of deviations: 1941236245.0000002
[2026-05-03 06:56:49] 2026-05-03 04:55:36,875 | INFO     | mean x (centered): 0.0
[2026-05-03 06:56:49] 2026-05-03 04:55:36,875 | INFO     | mean y: 2522996.596273292
[2026-05-03 06:56:49] 2026-05-03 04:55:36,875 | INFO     | intersect: 2522996.596273292
[2026-05-03 06:56:49] 2026-05-03 04:55:36,876 | INFO     | chi2: 0.03421568526875687
[2026-05-03 06:56:49] 2026-05-03 04:55:36,876 | INFO     | current memory leak: 1.50 B/s (using 161 data points, chi2=0.03)
[2026-05-03 06:56:49] 2026-05-03 04:55:36,876 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-05-03 06:56:49] 2026-05-03 04:55:36,877 | INFO     | ..............................
[2026-05-03 06:56:49] 2026-05-03 04:55:36,877 | INFO     | . Timing measurements:
[2026-05-03 06:56:49] 2026-05-03 04:55:36,877 | INFO     | . get job = 0 s
[2026-05-03 06:56:49] 2026-05-03 04:55:36,877 | INFO     | . initial setup = 117 s
[2026-05-03 06:56:49] 2026-05-03 04:55:36,877 | INFO     | . payload setup = 221 s
[2026-05-03 06:56:49] 2026-05-03 04:55:36,877 | INFO     | . stage-in = 0 s
[2026-05-03 06:56:49] 2026-05-03 04:55:36,877 | INFO     | . payload execution = 11173 s
[2026-05-03 06:56:49] 2026-05-03 04:55:36,877 | INFO     | . stage-out = 3 s
[2026-05-03 06:56:49] 2026-05-03 04:55:36,878 | INFO     | . log creation = 1 s
[2026-05-03 06:56:49] 2026-05-03 04:55:36,878 | INFO     | ..............................
[2026-05-03 06:56:49] 2026-05-03 04:55:37,238 | INFO     | 
[2026-05-03 06:56:49] 2026-05-03 04:55:37,238 | INFO     | job summary report
[2026-05-03 06:56:49] 2026-05-03 04:55:37,238 | INFO     | --------------------------------------------------
[2026-05-03 06:56:49] 2026-05-03 04:55:37,238 | INFO     | PanDA job id: 7126993677
[2026-05-03 06:56:49] 2026-05-03 04:55:37,238 | INFO     | task id: 50010691
[2026-05-03 06:56:49] 2026-05-03 04:55:37,239 | INFO     | errors: (none)
[2026-05-03 06:56:49] 2026-05-03 04:55:37,239 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 06:56:49] 2026-05-03 04:55:37,239 | INFO     | pilot state: finished 
[2026-05-03 06:56:49] 2026-05-03 04:55:37,239 | INFO     | transexitcode: 0
[2026-05-03 06:56:49] 2026-05-03 04:55:37,239 | INFO     | exeerrorcode: 0
[2026-05-03 06:56:49] 2026-05-03 04:55:37,239 | INFO     | exeerrordiag: 
[2026-05-03 06:56:49] 2026-05-03 04:55:37,239 | INFO     | exitcode: 0
[2026-05-03 06:56:49] 2026-05-03 04:55:37,240 | INFO     | exitmsg: OK
[2026-05-03 06:56:49] 2026-05-03 04:55:37,240 | INFO     | cpuconsumptiontime: 40781 s
[2026-05-03 06:56:49] 2026-05-03 04:55:37,240 | INFO     | nevents: 400
[2026-05-03 06:56:49] 2026-05-03 04:55:37,240 | INFO     | neventsw: 0
[2026-05-03 06:56:49] 2026-05-03 04:55:37,240 | INFO     | pid: 27801
[2026-05-03 06:56:49] 2026-05-03 04:55:37,240 | INFO     | pgrp: 27801
[2026-05-03 06:56:49] 2026-05-03 04:55:37,240 | INFO     | corecount: 8
[2026-05-03 06:56:49] 2026-05-03 04:55:37,240 | INFO     | event service: False
[2026-05-03 06:56:49] 2026-05-03 04:55:37,241 | INFO     | sizes: {0: 2275248, 1: 2268211, 2: 2277133, 12: 2277161, 11399: 2306427, 11404: 2315427, 11405: 2315611, 11406: 2315805}
[2026-05-03 06:56:49] 2026-05-03 04:55:37,241 | INFO     | --------------------------------------------------
[2026-05-03 06:56:49] 2026-05-03 04:55:37,241 | INFO     | 
[2026-05-03 06:56:49] 2026-05-03 04:55:37,241 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-05-03 06:56:49] 2026-05-03 04:55:37,744 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,745 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,745 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,745 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,746 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 06:56:49] 2026-05-03 04:55:37,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,746 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 06:56:49] 2026-05-03 04:55:37,747 | INFO     | job 7126993677 has completed (purged errors)
[2026-05-03 06:56:49] 2026-05-03 04:55:37,747 | INFO     | overall cleanup function is called
[2026-05-03 06:56:49] 2026-05-03 04:55:38,756 | INFO     | --- collectZombieJob: --- 10, [27801]
[2026-05-03 06:56:49] 2026-05-03 04:55:38,756 | INFO     | zombie collector waiting for pid 27801
[2026-05-03 06:56:49] 2026-05-03 04:55:38,756 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 06:56:49] 2026-05-03 04:55:38,756 | INFO     | collected zombie processes
[2026-05-03 06:56:49] 2026-05-03 04:55:38,756 | INFO     | will attempt to kill all subprocesses of pid=27801
[2026-05-03 06:56:49] 2026-05-03 04:55:38,820 | INFO     | process IDs to be killed: [27801] (in reverse order)
[2026-05-03 06:56:49] 2026-05-03 04:55:39,790 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 06:56:49] 2026-05-03 04:55:39,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 06:56:49] 2026-05-03 04:55:39,793 | INFO     | did not find any defunct processes belonging to 27801
[2026-05-03 06:56:49] 2026-05-03 04:55:39,794 | INFO     | did not find any defunct processes belonging to 27801
[2026-05-03 06:56:49] 2026-05-03 04:55:39,795 | INFO     | Ready for new job
[2026-05-03 06:56:49] 2026-05-03 04:55:39,796 | INFO     | ***************************************
[2026-05-03 06:56:49] 2026-05-03 04:55:39,796 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 06:56:49] 2026-05-03 04:55:39,796 | INFO     | ***************************************
[2026-05-03 06:56:49] 2026-05-03 04:55:39,797 | INFO     | 
[2026-05-03 06:56:49] 2026-05-03 04:55:39,797 | INFO     | pilot is running in a VM
[2026-05-03 06:56:49] 2026-05-03 04:55:39,797 | INFO     | architecture information:
[2026-05-03 06:56:49] 2026-05-03 04:55:39,821 | INFO     | executing command: cat /etc/os-release
[2026-05-03 06:56:49] 2026-05-03 04:55:40,109 | INFO     | cat /etc/os-release:
[2026-05-03 06:56:49] NAME="CentOS Linux"
[2026-05-03 06:56:49] VERSION="7 (Core)"
[2026-05-03 06:56:49] ID="centos"
[2026-05-03 06:56:49] ID_LIKE="rhel fedora"
[2026-05-03 06:56:49] VERSION_ID="7"
[2026-05-03 06:56:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 06:56:49] ANSI_COLOR="0;31"
[2026-05-03 06:56:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 06:56:49] HOME_URL="https://www.centos.org/"
[2026-05-03 06:56:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 06:56:49] 
[2026-05-03 06:56:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 06:56:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 06:56:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 06:56:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 06:56:49] 
[2026-05-03 06:56:49] 2026-05-03 04:55:40,109 | INFO     | ***************************************
[2026-05-03 06:56:49] 2026-05-03 04:55:40,613 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-05-03 06:56:49] 2026-05-03 04:55:40,871 | INFO     | sufficient remaining disk space (496345546752 B)
[2026-05-03 06:56:49] 2026-05-03 04:55:40,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 06:56:49] 2026-05-03 04:55:40,872 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 06:56:49] 2026-05-03 04:55:40,872 | INFO     | update_server=False
[2026-05-03 06:56:49] 2026-05-03 04:55:40,872 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 06:56:49] 2026-05-03 04:55:40,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 06:56:49] 2026-05-03 04:55:40,873 | INFO     | aborting loop
[2026-05-03 06:56:49] 2026-05-03 04:55:41,051 | INFO     | all data control threads have been joined
[2026-05-03 06:56:49] 2026-05-03 04:55:41,144 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 06:56:49] 2026-05-03 04:55:41,685 | INFO     | all job control threads have been joined
[2026-05-03 06:56:49] 2026-05-03 04:55:41,878 | INFO     | [job] retrieve thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:41,879 | INFO     | [job] job monitor thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:41,899 | INFO     | [job] validate thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:42,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 06:56:49] 2026-05-03 04:55:42,060 | INFO     | [data] control thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:42,196 | INFO     | all payload control threads have been joined
[2026-05-03 06:56:49] 2026-05-03 04:55:42,258 | INFO     | [payload] validate_post thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:42,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 06:56:49] 2026-05-03 04:55:42,691 | INFO     | [job] control thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:42,843 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:42,936 | INFO     | [data] copytool_in thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:43,040 | INFO     | [job] queue monitor thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:43,149 | INFO     | [payload] failed_post thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:43,202 | INFO     | [payload] control thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:43,204 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:43,232 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:43,362 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:44,310 | INFO     | [data] copytool_out thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:55:45,153 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 06:56:49] 2026-05-03 04:56:10,336 | INFO     | PID=23329 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-03 06:56:49] 2026-05-03 04:56:10,336 | INFO     | .. there are 2 such processes running
[2026-05-03 06:56:49] 2026-05-03 04:56:10,342 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 06:56:49] 2026-05-03 04:56:10,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 06:56:49] 2026-05-03 04:56:10,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 06:56:49] 2026-05-03 04:56:37,269 | INFO     | [monitor] cgroup control has ended
[2026-05-03 06:56:49] 2026-05-03 04:56:39,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139676084614976)>', '<ExcThread(monitor, started 139675205359360)>']
[2026-05-03 06:56:49] 2026-05-03 04:56:39,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 06:56:49] 2026-05-03 04:56:39,516 | INFO     | [monitor] control thread has ended
[2026-05-03 06:56:49] 2026-05-03 04:56:44,204 | INFO     | all workflow threads have been joined
[2026-05-03 06:56:49] 2026-05-03 04:56:44,204 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 06:56:49] 2026-05-03 04:56:44,204 | INFO     | traces error code: 0
[2026-05-03 06:56:49] 2026-05-03 04:56:44,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 06:56:49] 2026-05-03 04:56:44,534 [wrapper] ==== pilot stdout END ====
[2026-05-03 06:56:49] 2026-05-03 04:56:44,628 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 06:56:49] 2026-05-03 04:56:44,713 [wrapper] pilotpid: 23329
[2026-05-03 06:56:49] 2026-05-03 04:56:44,826 [wrapper] Pilot exit status: 0
[2026-05-03 06:56:49] 2026-05-03 04:56:45,325 [wrapper] pandaids: 7126993677
[2026-05-03 06:56:49] 2026-05-03 04:56:46,366 [wrapper] cleanup supervisor_pilot  1624 23330
[2026-05-03 06:56:49] 2026-05-03 04:56:46,472 [wrapper] Test setup, not cleaning
[2026-05-03 06:56:49] 2026-05-03 04:56:46,567 [wrapper] apfmon messages muted
[2026-05-03 06:56:49] 2026-05-03 04:56:46,681 [wrapper] ==== wrapper stdout END ====
[2026-05-03 06:56:49] 2026-05-03 04:56:46,796 [wrapper] ==== wrapper stderr END ====
[2026-05-03 06:56:49]  *** Error codes and diagnostics ***
[2026-05-03 06:56:49]     "exeErrorCode": 0,
[2026-05-03 06:56:49]     "pilotErrorCode": 0,
[2026-05-03 06:56:49]  *** Listing of results directory ***
[2026-05-03 06:56:49] total 406308
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc    683926 May  3 00:21 pilot3.tar.gz
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc      5631 May  3 01:01 queuedata.json
[2026-05-03 06:56:49] -rwx------. 1 boinc boinc     36322 May  3 01:05 runpilot2-wrapper.sh
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc       100 May  3 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 06:56:49] -rwxr-xr-x. 1 boinc boinc      7986 May  3 03:38 run_atlas
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc       105 May  3 03:38 job.xml
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc      6307 May  3 03:38 init_data.xml
[2026-05-03 06:56:49] -rw-r--r--. 2 boinc boinc 245411258 May  3 03:38 EVNT.50010689._000005.pool.root.1
[2026-05-03 06:56:49] -rw-r--r--. 2 boinc boinc     15667 May  3 03:38 start_atlas.sh
[2026-05-03 06:56:49] drwxrwx--x. 2 boinc boinc        68 May  3 03:38 shared
[2026-05-03 06:56:49] -rw-r--r--. 2 boinc boinc    697400 May  3 03:38 input.tar.gz
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc         0 May  3 03:38 boinc_lockfile
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc      2553 May  3 03:39 pandaJob.out
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc       415 May  3 03:45 workernode_map.json
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc   1002964 May  3 03:45 agis_schedconf.cvmfs.json
[2026-05-03 06:56:49] drwx------. 5 boinc boinc      4096 May  3 03:45 pilot3
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc 163633342 May  3 06:54 HITS.50010691._000089.pool.root.1
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc       488 May  3 06:54 boinc_task_state.xml
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc      1012 May  3 06:55 memory_monitor_summary.json
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc   1508687 May  3 06:55 agis_ddmendpoints.agis.ALL.json
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc    368627 May  3 06:55 log.50010691._000089.job.log.tgz.1
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc      6326 May  3 06:55 heartbeat_new.json
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc      6217 May  3 06:55 heartbeat.json
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc        95 May  3 06:56 pilot_heartbeat.json
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc      8192 May  3 06:56 boinc_mmap_file
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc        28 May  3 06:56 wrapper_checkpoint.txt
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc      4884 May  3 06:56 pilotlog.txt
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc   1079925 May  3 06:56 log.50010691._000089.job.log.1
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc       357 May  3 06:56 output.list
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc       410 May  3 06:56 runtime_log
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc   1464320 May  3 06:56 result.tar.gz
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc      8455 May  3 06:56 runtime_log.err
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc       655 May  3 06:56 832421c2fe68.diag
[2026-05-03 06:56:49] -rw-r--r--. 1 boinc boinc     20634 May  3 06:56 stderr.txt
[2026-05-03 06:56:49] HITS file was successfully produced:
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc 163633342 May  3 06:54 shared/HITS.pool.root.1
[2026-05-03 06:56:49]  *** Contents of shared directory: ***
[2026-05-03 06:56:49] total 401592
[2026-05-03 06:56:49] -rw-r--r--. 2 boinc boinc 245411258 May  3 03:38 ATLAS.root_0
[2026-05-03 06:56:49] -rw-r--r--. 2 boinc boinc     15667 May  3 03:38 start_atlas.sh
[2026-05-03 06:56:49] -rw-r--r--. 2 boinc boinc    697400 May  3 03:38 input.tar.gz
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc 163633342 May  3 06:54 HITS.pool.root.1
[2026-05-03 06:56:49] -rw-------. 1 boinc boinc   1464320 May  3 06:56 result.tar.gz
06:56:51 (19353): run_atlas exited; CPU time 40877.619436
06:56:51 (19353): called boinc_finish(0)

</stderr_txt>
]]>

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