Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:56:54 (2140): wrapper (7.7.26015): starting
06:56:54 (2140): wrapper: running run_atlas (--nthreads 8)
[2026-05-03 06:56:54] Arguments: --nthreads 8
[2026-05-03 06:56:54] Threads: 8
[2026-05-03 06:56:54] Checking for CVMFS
[2026-05-03 06:56:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-03 06:56:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-03 06:56:58] Running cvmfs_config stat atlas.cern.ch
[2026-05-03 06:56:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-03 06:56:59] 2.11.2.0 11840 25178 102160 159156 3 53 24432177 25165824 96 130560 0 9202387 99.918 6809260 9487 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-03 06:56:59] CVMFS is ok
[2026-05-03 06:56:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 06:56:59] Checking for apptainer binary...
[2026-05-03 06:56:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-03 06:56:59] Running /usr/bin/apptainer --version
[2026-05-03 06:56:59] apptainer version 1.3.2-1.el7
[2026-05-03 06:56:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 06:57:26] cg-vwn419.simple-grid.lan
[2026-05-03 06:57:26] apptainer works
[2026-05-03 06:57:27] Set ATHENA_PROC_NUMBER=8
[2026-05-03 06:57:27] Set ATHENA_CORE_NUMBER=8
[2026-05-03 06:57:27] Starting ATLAS job with PandaID=7126993666
[2026-05-03 06:57:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 10:03:12]  *** The last 200 lines of the pilot log: ***
[2026-05-03 10:03:12] 2026-05-03 08:02:32,997 | INFO     | job 7126993666 has finished - writing final server update
[2026-05-03 10:03:12] 2026-05-03 08:02:32,998 | INFO     | total number of processed events: 400 (read)
[2026-05-03 10:03:12] 2026-05-03 08:02:32,999 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7126993666/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 10:03:12] 2026-05-03 08:02:33,000 | INFO     | extracted standard info from prmon json
[2026-05-03 10:03:12] 2026-05-03 08:02:33,000 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 10:03:12] 2026-05-03 08:02:33,000 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 10:03:12] 2026-05-03 08:02:33,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 10:03:12] 2026-05-03 08:02:33,004 | INFO     | fitting pss+swap vs Time
[2026-05-03 10:03:12] 2026-05-03 08:02:33,004 | INFO     | sum of square deviations: 1523386702.5
[2026-05-03 10:03:12] 2026-05-03 08:02:33,006 | INFO     | sum of deviations: 83822788178.5
[2026-05-03 10:03:12] 2026-05-03 08:02:33,006 | INFO     | mean x (centered): 0.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,006 | INFO     | mean y: 2411140.5
[2026-05-03 10:03:12] 2026-05-03 08:02:33,006 | INFO     | intersect: 2411140.5
[2026-05-03 10:03:12] 2026-05-03 08:02:33,006 | INFO     | chi2: 10.00513017452859
[2026-05-03 10:03:12] 2026-05-03 08:02:33,007 | INFO     | sum of square deviations: 1392881930.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,008 | INFO     | sum of deviations: 93237722737.99997
[2026-05-03 10:03:12] 2026-05-03 08:02:33,008 | INFO     | mean x (centered): 0.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,008 | INFO     | mean y: 2421811.206060606
[2026-05-03 10:03:12] 2026-05-03 08:02:33,008 | INFO     | intersect: 2421811.206060606
[2026-05-03 10:03:12] 2026-05-03 08:02:33,008 | INFO     | chi2: 9.28920714146946
[2026-05-03 10:03:12] 2026-05-03 08:02:33,009 | INFO     | current chi2=9.28920714146946 (change=7.155559403732223 %)
[2026-05-03 10:03:12] 2026-05-03 08:02:33,009 | INFO     | right removable region: 164
[2026-05-03 10:03:12] 2026-05-03 08:02:33,009 | INFO     | sum of square deviations: 1392881930.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,010 | INFO     | sum of deviations: 23994097276.999985
[2026-05-03 10:03:12] 2026-05-03 08:02:33,010 | INFO     | mean x (centered): 0.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,010 | INFO     | mean y: 2481014.5515151517
[2026-05-03 10:03:12] 2026-05-03 08:02:33,010 | INFO     | intersect: 2481014.5515151517
[2026-05-03 10:03:12] 2026-05-03 08:02:33,011 | INFO     | chi2: 4.366850905796037
[2026-05-03 10:03:12] 2026-05-03 08:02:33,011 | INFO     | current chi2=4.366850905796037 (change=56.35388216223994 %)
[2026-05-03 10:03:12] 2026-05-03 08:02:33,011 | INFO     | sum of square deviations: 1270051720.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,012 | INFO     | sum of deviations: -23553760694.499996
[2026-05-03 10:03:12] 2026-05-03 08:02:33,013 | INFO     | mean x (centered): 0.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,013 | INFO     | mean y: 2539990.91875
[2026-05-03 10:03:12] 2026-05-03 08:02:33,013 | INFO     | intersect: 2539990.91875
[2026-05-03 10:03:12] 2026-05-03 08:02:33,013 | INFO     | chi2: 1.179220696439911
[2026-05-03 10:03:12] 2026-05-03 08:02:33,013 | INFO     | current chi2=1.179220696439911 (change=72.99608523673766 %)
[2026-05-03 10:03:12] 2026-05-03 08:02:33,014 | INFO     | sum of square deviations: 1154663510.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,015 | INFO     | sum of deviations: -32924665332.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,015 | INFO     | mean x (centered): 0.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,015 | INFO     | mean y: 2552191.4451612905
[2026-05-03 10:03:12] 2026-05-03 08:02:33,015 | INFO     | intersect: 2552191.4451612905
[2026-05-03 10:03:12] 2026-05-03 08:02:33,015 | INFO     | chi2: 0.9366420091173373
[2026-05-03 10:03:12] 2026-05-03 08:02:33,018 | INFO     | current chi2=0.9366420091173373 (change=20.571101580469477 %)
[2026-05-03 10:03:12] 2026-05-03 08:02:33,019 | INFO     | left removable region: 15
[2026-05-03 10:03:12] 2026-05-03 08:02:33,019 | INFO     | sum of square deviations: 1025693650.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,020 | INFO     | sum of deviations: -20792169396.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,020 | INFO     | mean x (centered): 0.0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,020 | INFO     | mean y: 2568908.1409395975
[2026-05-03 10:03:12] 2026-05-03 08:02:33,020 | INFO     | intersect: 2568908.1409395975
[2026-05-03 10:03:12] 2026-05-03 08:02:33,021 | INFO     | chi2: 0.057120297795002044
[2026-05-03 10:03:12] 2026-05-03 08:02:33,021 | INFO     | current memory leak: -20.27 B/s (using 149 data points, chi2=0.06)
[2026-05-03 10:03:12] 2026-05-03 08:02:33,021 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-05-03 10:03:12] 2026-05-03 08:02:33,021 | INFO     | ..............................
[2026-05-03 10:03:12] 2026-05-03 08:02:33,022 | INFO     | . Timing measurements:
[2026-05-03 10:03:12] 2026-05-03 08:02:33,022 | INFO     | . get job = 0 s
[2026-05-03 10:03:12] 2026-05-03 08:02:33,022 | INFO     | . initial setup = 120 s
[2026-05-03 10:03:12] 2026-05-03 08:02:33,022 | INFO     | . payload setup = 211 s
[2026-05-03 10:03:12] 2026-05-03 08:02:33,022 | INFO     | . stage-in = 0 s
[2026-05-03 10:03:12] 2026-05-03 08:02:33,022 | INFO     | . payload execution = 10500 s
[2026-05-03 10:03:12] 2026-05-03 08:02:33,022 | INFO     | . stage-out = 4 s
[2026-05-03 10:03:12] 2026-05-03 08:02:33,022 | INFO     | . log creation = 1 s
[2026-05-03 10:03:12] 2026-05-03 08:02:33,022 | INFO     | ..............................
[2026-05-03 10:03:12] 2026-05-03 08:02:33,168 | INFO     | 
[2026-05-03 10:03:12] 2026-05-03 08:02:33,168 | INFO     | job summary report
[2026-05-03 10:03:12] 2026-05-03 08:02:33,168 | INFO     | --------------------------------------------------
[2026-05-03 10:03:12] 2026-05-03 08:02:33,168 | INFO     | PanDA job id: 7126993666
[2026-05-03 10:03:12] 2026-05-03 08:02:33,168 | INFO     | task id: 50010691
[2026-05-03 10:03:12] 2026-05-03 08:02:33,168 | INFO     | errors: (none)
[2026-05-03 10:03:12] 2026-05-03 08:02:33,169 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 10:03:12] 2026-05-03 08:02:33,169 | INFO     | pilot state: finished 
[2026-05-03 10:03:12] 2026-05-03 08:02:33,169 | INFO     | transexitcode: 0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,169 | INFO     | exeerrorcode: 0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,169 | INFO     | exeerrordiag: 
[2026-05-03 10:03:12] 2026-05-03 08:02:33,169 | INFO     | exitcode: 0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,169 | INFO     | exitmsg: OK
[2026-05-03 10:03:12] 2026-05-03 08:02:33,169 | INFO     | cpuconsumptiontime: 38394 s
[2026-05-03 10:03:12] 2026-05-03 08:02:33,169 | INFO     | nevents: 400
[2026-05-03 10:03:12] 2026-05-03 08:02:33,170 | INFO     | neventsw: 0
[2026-05-03 10:03:12] 2026-05-03 08:02:33,170 | INFO     | pid: 10605
[2026-05-03 10:03:12] 2026-05-03 08:02:33,170 | INFO     | pgrp: 10605
[2026-05-03 10:03:12] 2026-05-03 08:02:33,170 | INFO     | corecount: 8
[2026-05-03 10:03:12] 2026-05-03 08:02:33,170 | INFO     | event service: False
[2026-05-03 10:03:12] 2026-05-03 08:02:33,170 | INFO     | sizes: {0: 2275302, 1: 2277131, 12: 2277131, 10715: 2306088, 10720: 2315088, 10723: 2315144, 10724: 2315530}
[2026-05-03 10:03:12] 2026-05-03 08:02:33,170 | INFO     | --------------------------------------------------
[2026-05-03 10:03:12] 2026-05-03 08:02:33,170 | INFO     | 
[2026-05-03 10:03:12] 2026-05-03 08:02:33,171 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-05-03 10:03:12] 2026-05-03 08:02:33,795 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,795 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,796 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,796 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,797 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 10:03:12] 2026-05-03 08:02:33,797 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,798 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 10:03:12] 2026-05-03 08:02:33,798 | INFO     | job 7126993666 has completed (purged errors)
[2026-05-03 10:03:12] 2026-05-03 08:02:33,798 | INFO     | overall cleanup function is called
[2026-05-03 10:03:12] 2026-05-03 08:02:34,656 | INFO     | PID=6139 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-03 10:03:12] 2026-05-03 08:02:34,657 | INFO     | .. there are 2 such processes running
[2026-05-03 10:03:12] 2026-05-03 08:02:34,807 | INFO     | --- collectZombieJob: --- 10, [10605]
[2026-05-03 10:03:12] 2026-05-03 08:02:34,807 | INFO     | zombie collector waiting for pid 10605
[2026-05-03 10:03:12] 2026-05-03 08:02:34,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 10:03:12] 2026-05-03 08:02:34,807 | INFO     | collected zombie processes
[2026-05-03 10:03:12] 2026-05-03 08:02:34,807 | INFO     | will attempt to kill all subprocesses of pid=10605
[2026-05-03 10:03:12] 2026-05-03 08:02:34,879 | INFO     | process IDs to be killed: [10605] (in reverse order)
[2026-05-03 10:03:12] 2026-05-03 08:02:35,911 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 10:03:12] 2026-05-03 08:02:35,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 10:03:12] 2026-05-03 08:02:35,914 | INFO     | did not find any defunct processes belonging to 10605
[2026-05-03 10:03:12] 2026-05-03 08:02:35,915 | INFO     | did not find any defunct processes belonging to 10605
[2026-05-03 10:03:12] 2026-05-03 08:02:35,916 | INFO     | Ready for new job
[2026-05-03 10:03:12] 2026-05-03 08:02:35,917 | INFO     | ***************************************
[2026-05-03 10:03:12] 2026-05-03 08:02:35,918 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 10:03:12] 2026-05-03 08:02:35,918 | INFO     | ***************************************
[2026-05-03 10:03:12] 2026-05-03 08:02:35,918 | INFO     | 
[2026-05-03 10:03:12] 2026-05-03 08:02:35,918 | INFO     | pilot is running in a VM
[2026-05-03 10:03:12] 2026-05-03 08:02:35,919 | INFO     | architecture information:
[2026-05-03 10:03:12] 2026-05-03 08:02:35,927 | INFO     | executing command: cat /etc/os-release
[2026-05-03 10:03:12] 2026-05-03 08:02:36,223 | INFO     | cat /etc/os-release:
[2026-05-03 10:03:12] NAME="CentOS Linux"
[2026-05-03 10:03:12] VERSION="7 (Core)"
[2026-05-03 10:03:12] ID="centos"
[2026-05-03 10:03:12] ID_LIKE="rhel fedora"
[2026-05-03 10:03:12] VERSION_ID="7"
[2026-05-03 10:03:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 10:03:12] ANSI_COLOR="0;31"
[2026-05-03 10:03:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 10:03:12] HOME_URL="https://www.centos.org/"
[2026-05-03 10:03:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 10:03:12] 
[2026-05-03 10:03:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 10:03:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 10:03:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 10:03:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 10:03:12] 
[2026-05-03 10:03:12] 2026-05-03 08:02:36,224 | INFO     | ***************************************
[2026-05-03 10:03:12] 2026-05-03 08:02:36,727 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-05-03 10:03:12] 2026-05-03 08:02:37,009 | INFO     | sufficient remaining disk space (496089694208 B)
[2026-05-03 10:03:12] 2026-05-03 08:02:37,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 10:03:12] 2026-05-03 08:02:37,010 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 10:03:12] 2026-05-03 08:02:37,010 | INFO     | update_server=False
[2026-05-03 10:03:12] 2026-05-03 08:02:37,010 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 10:03:12] 2026-05-03 08:02:37,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 10:03:12] 2026-05-03 08:02:37,255 | INFO     | all job control threads have been joined
[2026-05-03 10:03:12] 2026-05-03 08:02:37,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 10:03:12] 2026-05-03 08:02:37,486 | INFO     | aborting loop
[2026-05-03 10:03:12] 2026-05-03 08:02:37,643 | INFO     | all payload control threads have been joined
[2026-05-03 10:03:12] 2026-05-03 08:02:37,967 | INFO     | all data control threads have been joined
[2026-05-03 10:03:12] 2026-05-03 08:02:38,016 | INFO     | [job] retrieve thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:38,187 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 10:03:12] 2026-05-03 08:02:38,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 10:03:12] 2026-05-03 08:02:38,261 | INFO     | [job] control thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:38,404 | INFO     | [data] copytool_in thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:38,492 | INFO     | [job] job monitor thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:38,517 | INFO     | [payload] validate_post thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:38,621 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:38,649 | INFO     | [payload] control thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:38,674 | INFO     | [job] validate thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:38,920 | INFO     | [payload] failed_post thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:38,973 | INFO     | [data] control thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:39,032 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:39,127 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:39,173 | INFO     | [data] copytool_out thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:39,193 | INFO     | [job] queue monitor thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:39,434 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:42,206 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 10:03:12] 2026-05-03 08:02:55,298 | INFO     | [monitor] cgroup control has ended
[2026-05-03 10:03:12] 2026-05-03 08:02:55,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058403977024)>', '<ExcThread(monitor, started 140057675560704)>']
[2026-05-03 10:03:12] 2026-05-03 08:03:00,765 | INFO     | all workflow threads have been joined
[2026-05-03 10:03:12] 2026-05-03 08:03:00,765 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 10:03:12] 2026-05-03 08:03:00,765 | INFO     | traces error code: 0
[2026-05-03 10:03:12] 2026-05-03 08:03:00,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 10:03:12] 2026-05-03 08:03:06,802 | INFO     | PID=6139 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-03 10:03:12] 2026-05-03 08:03:06,803 | INFO     | .. there are 2 such processes running
[2026-05-03 10:03:12] 2026-05-03 08:03:06,805 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 10:03:12] 2026-05-03 08:03:06,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 10:03:12] 2026-05-03 08:03:06,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 10:03:12] 2026-05-03 08:03:06,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 10:03:12] 2026-05-03 08:03:06,805 | CRITICAL | thread 'MainThread' is not alive
[2026-05-03 10:03:12] 2026-05-03 08:03:06,805 | INFO     | [monitor] control thread has ended
[2026-05-03 10:03:12] 2026-05-03 08:03:07,208 [wrapper] ==== pilot stdout END ====
[2026-05-03 10:03:12] 2026-05-03 08:03:07,304 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 10:03:12] 2026-05-03 08:03:07,414 [wrapper] pilotpid: 6139
[2026-05-03 10:03:12] 2026-05-03 08:03:07,525 [wrapper] Pilot exit status: 0
[2026-05-03 10:03:12] 2026-05-03 08:03:07,944 [wrapper] pandaids: 7126993666
[2026-05-03 10:03:12] 2026-05-03 08:03:08,782 [wrapper] cleanup supervisor_pilot 16910 6140
[2026-05-03 10:03:12] 2026-05-03 08:03:08,891 [wrapper] Test setup, not cleaning
[2026-05-03 10:03:12] 2026-05-03 08:03:08,960 [wrapper] apfmon messages muted
[2026-05-03 10:03:12] 2026-05-03 08:03:09,053 [wrapper] ==== wrapper stdout END ====
[2026-05-03 10:03:12] 2026-05-03 08:03:09,142 [wrapper] ==== wrapper stderr END ====
[2026-05-03 10:03:12]  *** Error codes and diagnostics ***
[2026-05-03 10:03:12]     "exeErrorCode": 0,
[2026-05-03 10:03:12]     "pilotErrorCode": 0,
[2026-05-03 10:03:12]  *** Listing of results directory ***
[2026-05-03 10:03:12] total 411940
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc    683926 May  3 00:21 pilot3.tar.gz
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc      5631 May  3 01:01 queuedata.json
[2026-05-03 10:03:12] -rwx------. 1 boinc boinc     36322 May  3 01:05 runpilot2-wrapper.sh
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc       100 May  3 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 10:03:12] -rwxr-xr-x. 1 boinc boinc      7986 May  3 06:56 run_atlas
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc       105 May  3 06:56 job.xml
[2026-05-03 10:03:12] -rw-r--r--. 2 boinc boinc 245411258 May  3 06:56 EVNT.50010689._000005.pool.root.1
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc      6307 May  3 06:56 init_data.xml
[2026-05-03 10:03:12] -rw-r--r--. 2 boinc boinc     15667 May  3 06:56 start_atlas.sh
[2026-05-03 10:03:12] drwxrwx--x. 2 boinc boinc        68 May  3 06:56 shared
[2026-05-03 10:03:12] -rw-r--r--. 2 boinc boinc    697401 May  3 06:56 input.tar.gz
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc         0 May  3 06:56 boinc_lockfile
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc      2552 May  3 06:57 pandaJob.out
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc       415 May  3 07:03 workernode_map.json
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc   1002964 May  3 07:03 agis_schedconf.cvmfs.json
[2026-05-03 10:03:12] drwx------. 5 boinc boinc      4096 May  3 07:03 pilot3
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc 169584336 May  3 10:01 HITS.50010691._000078.pool.root.1
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc       489 May  3 10:01 boinc_task_state.xml
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc      1012 May  3 10:02 memory_monitor_summary.json
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc   1508687 May  3 10:02 agis_ddmendpoints.agis.ALL.json
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc    345790 May  3 10:02 log.50010691._000078.job.log.tgz.1
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc      6333 May  3 10:02 heartbeat_new.json
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc      6224 May  3 10:02 heartbeat.json
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc      8192 May  3 10:02 boinc_mmap_file
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc        28 May  3 10:02 wrapper_checkpoint.txt
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc        95 May  3 10:03 pilot_heartbeat.json
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc       889 May  3 10:03 pilotlog.txt
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc   1013465 May  3 10:03 log.50010691._000078.job.log.1
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc       357 May  3 10:03 output.list
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc       410 May  3 10:03 runtime_log
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc   1372160 May  3 10:03 result.tar.gz
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc      8455 May  3 10:03 runtime_log.err
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc       656 May  3 10:03 831ed3d2680d.diag
[2026-05-03 10:03:12] -rw-r--r--. 1 boinc boinc     20672 May  3 10:03 stderr.txt
[2026-05-03 10:03:12] HITS file was successfully produced:
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc 169584336 May  3 10:01 shared/HITS.pool.root.1
[2026-05-03 10:03:12]  *** Contents of shared directory: ***
[2026-05-03 10:03:12] total 407312
[2026-05-03 10:03:12] -rw-r--r--. 2 boinc boinc 245411258 May  3 06:56 ATLAS.root_0
[2026-05-03 10:03:12] -rw-r--r--. 2 boinc boinc     15667 May  3 06:56 start_atlas.sh
[2026-05-03 10:03:12] -rw-r--r--. 2 boinc boinc    697401 May  3 06:56 input.tar.gz
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc 169584336 May  3 10:01 HITS.pool.root.1
[2026-05-03 10:03:12] -rw-------. 1 boinc boinc   1372160 May  3 10:03 result.tar.gz
10:03:13 (2140): run_atlas exited; CPU time 38476.396992
10:03:13 (2140): called boinc_finish(0)

</stderr_txt>
]]>

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