Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-02 13:17:47 (3436): vboxwrapper version 26210
2026-05-02 13:17:47 (3436): BOINC client version: 8.2.9
2026-05-02 13:17:48 (3436): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-05-02 13:17:48 (3436): Successfully copied 'init_data.xml' to the shared directory.
2026-05-02 13:17:48 (3436): Create VM. (boinc_fe47f0b56c71f144, slot#0)
2026-05-02 13:17:49 (3436): Setting Memory Size for VM. (4200MB)
2026-05-02 13:17:49 (3436): Setting CPU Count for VM. (2)
2026-05-02 13:17:50 (3436): Setting Chipset Options for VM.
2026-05-02 13:17:50 (3436): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-02 13:17:50 (3436): Setting Boot Options for VM.
2026-05-02 13:17:51 (3436): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-02 13:17:51 (3436): Enabling VM Network Access.
2026-05-02 13:17:51 (3436): Disabling USB Support for VM.
2026-05-02 13:17:52 (3436): Disabling COM Port Support for VM.
2026-05-02 13:17:52 (3436): Disabling LPT Port Support for VM.
2026-05-02 13:17:52 (3436): Disabling Audio Support for VM.
2026-05-02 13:17:52 (3436): Disabling Clipboard Support for VM.
2026-05-02 13:17:53 (3436): Disabling Drag and Drop Support for VM.
2026-05-02 13:17:53 (3436): Adding storage controller(s) to VM.
2026-05-02 13:17:53 (3436): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-02 13:17:55 (3436): Adding VirtualBox Guest Additions to VM.
2026-05-02 13:17:56 (3436): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-02 13:17:56 (3436): forwarding host port 58385 to guest port 80
2026-05-02 13:17:56 (3436): Enabling remote desktop for VM.
2026-05-02 13:17:57 (3436): Enabling shared directory for VM.
2026-05-02 13:17:58 (3436): Starting VM using VBoxManage interface. (boinc_fe47f0b56c71f144, slot#0)
2026-05-02 13:18:06 (3436): Successfully started VM. (PID = '9500')
2026-05-02 13:18:06 (3436): Reporting VM Process ID to BOINC.
2026-05-02 13:18:06 (3436): Guest Log: BIOS: VirtualBox 7.0.6
2026-05-02 13:18:06 (3436): Guest Log: CPUID EDX: 0x178bfbff
2026-05-02 13:18:06 (3436): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-02 13:18:06 (3436): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-02 13:18:06 (3436): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-02 13:18:06 (3436): Detected: Web Application Enabled (http://localhost:58385)
2026-05-02 13:18:06 (3436): Detected: Remote Desktop Enabled (localhost:58398)
2026-05-02 13:18:06 (3436): Preference change detected
2026-05-02 13:18:06 (3436): Setting CPU throttle for VM. (100%)
2026-05-02 13:18:06 (3436): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 420 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-02 13:18:08 (3436): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-02 13:18:08 (3436): Guest Log: BIOS: Booting from Hard Disk...
2026-05-02 13:18:11 (3436): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-02 13:18:11 (3436): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-02 13:18:11 (3436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-02 13:18:24 (3436): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-02 13:18:24 (3436): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-02 13:19:00 (3436): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-02 13:19:00 (3436): Guest Log: 00:00:00.000743 main     Log opened 2026-05-02T13:18:57.865111000Z
2026-05-02 13:19:00 (3436): Guest Log: 00:00:00.001086 main     OS Product: Linux
2026-05-02 13:19:00 (3436): Guest Log: 00:00:00.001347 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-02 13:19:00 (3436): Guest Log: 00:00:00.001486 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-02 13:19:00 (3436): Guest Log: 00:00:00.001613 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-02 13:19:00 (3436): Guest Log: 00:00:00.001618 main     Process ID: 1271
2026-05-02 13:19:00 (3436): Guest Log: 00:00:00.001620 main     Package type: LINUX_64BITS_GENERIC
2026-05-02 13:19:00 (3436): Guest Log: 00:00:00.006573 main     5.2.32 r132073 started. Verbose level = 0
2026-05-02 13:19:01 (3436): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-02 13:19:01 (3436): Guest Log: [INFO] Mounting shared directory
2026-05-02 13:19:01 (3436): Guest Log: [INFO] Checking for init_data.xml
2026-05-02 13:19:10 (3436): Guest Log: 00:00:10.019760 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 863 204 000ns (GuestNow=1 777 742 349 744 663 000 ns GuestLast=1 777 727 937 881 459 000 ns fSetTimeLastLoop=true )
2026-05-02 13:19:10 (3436): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-02 13:19:10 (3436): Guest Log: [INFO] Detected branch: prod
2026-05-02 13:19:10 (3436): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-02 13:19:10 (3436): Guest Log: Copying input files
2026-05-02 13:19:12 (3436): Guest Log: Copied input files into RunAtlas.
2026-05-02 13:19:12 (3436): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-02 13:19:12 (3436): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-02 13:19:12 (3436): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-02 13:19:12 (3436): Guest Log: Further information can be found at the LHC@home message board.
2026-05-02 13:19:29 (3436): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-02 13:19:29 (3436): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-02 13:19:29 (3436): Guest Log: 2.6.3.0 1572 0 32140 159138 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-02 13:19:34 (3436): Guest Log: copied the webapp to /var/www
2026-05-02 13:19:34 (3436): Guest Log: ATHENA_PROC_NUMBER=2
2026-05-02 13:19:34 (3436): Guest Log: ATHENA_CORE_NUMBER=2
2026-05-02 13:19:35 (3436): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-02 13:19:35 (3436): Guest Log:  *** Starting ATLAS job. (PandaID=7126603112 taskID=49263200) ***
2026-05-02 14:58:29 (3436): Status Report: Elapsed Time: '6000.000000'
2026-05-02 14:58:29 (3436): Status Report: CPU Time: '10813.000000'
2026-05-02 16:38:52 (3436): Status Report: Elapsed Time: '12000.000000'
2026-05-02 16:38:52 (3436): Status Report: CPU Time: '22750.234375'
2026-05-02 18:19:18 (3436): Status Report: Elapsed Time: '18000.197895'
2026-05-02 18:19:18 (3436): Status Report: CPU Time: '34688.921875'
2026-05-02 19:59:42 (3436): Status Report: Elapsed Time: '24000.197895'
2026-05-02 19:59:42 (3436): Status Report: CPU Time: '46621.328125'
2026-05-02 21:19:07 (3436): Guest Log:  *** Job finished ***
2026-05-02 21:19:07 (3436): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:18:45,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:18:45,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:18:57,784 | INFO     | [monitor] cgroup control has ended
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:18:58,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968881166144)>', '<ExcThread(monitor, started 139968571741952)>']
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:18:59,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:18:59,402 | INFO     | [monitor] control thread has ended
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:03,888 | INFO     | all workflow threads have been joined
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:03,888 | INFO     | end of generic workflow (traces error code: 0)
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:03,888 | INFO     | traces error code: 0
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:03,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:04,167 [wrapper] ==== pilot stdout END ====
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:04,175 [wrapper] ==== wrapper stdout RESUME ====
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:04,184 [wrapper] pilotpid: 5953
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:04,197 [wrapper] Pilot exit status: 0
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:04,380 [wrapper] pandaids: 7126603112
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:04,429 [wrapper] cleanup supervisor_pilot   867 5954
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:04,435 [wrapper] Test setup, not cleaning
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:04,448 [wrapper] apfmon messages muted
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:04,454 [wrapper] ==== wrapper stdout END ====
2026-05-02 21:19:07 (3436): Guest Log: 2026-05-03 01:19:04,463 [wrapper] ==== wrapper stderr END ====
2026-05-02 21:19:07 (3436): Guest Log:  *** Error codes and diagnostics ***
2026-05-02 21:19:07 (3436): Guest Log:     "exeErrorCode": 0,
2026-05-02 21:19:07 (3436): Guest Log:     "pilotErrorCode": 0,
2026-05-02 21:19:07 (3436): Guest Log:  *** Listing of results directory ***
2026-05-02 21:19:07 (3436): Guest Log: total 196852
2026-05-02 21:19:07 (3436): Guest Log: -rw-r--r--. 1 atlas atlas    683926 May  2 16:58 pilot3.tar.gz
2026-05-02 21:19:07 (3436): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May  2 17:15 queuedata.json
2026-05-02 21:19:07 (3436): Guest Log: -rwx------. 1 atlas atlas     36322 May  2 17:16 runpilot2-wrapper.sh
2026-05-02 21:19:07 (3436): Guest Log: -rwxr-xr-x. 1 atlas atlas      8065 May  2 17:19 init_data.xml
2026-05-02 21:19:07 (3436): Guest Log: -rwxr-xr-x. 1 atlas atlas    697428 May  2 17:19 input.tar.gz
2026-05-02 21:19:07 (3436): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 May  2 17:19 start_atlas.sh
2026-05-02 21:19:07 (3436): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  2 17:19 EVNT.49263198._001994.pool.root.1 -> /data/./ATLAS.root_0
2026-05-02 21:19:07 (3436): Guest Log: -rw-r--r--. 1 atlas atlas      2574 May  2 17:19 pandaJob.out
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas   1002976 May  2 17:21 agis_schedconf.cvmfs.json
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas       427 May  2 17:21 workernode_map.json
2026-05-02 21:19:07 (3436): Guest Log: drwx------. 5 atlas atlas      4096 May  2 17:21 pilot3
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas 191538094 May  3 01:17 HITS.49263200._090947.pool.root.1
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas      1025 May  3 01:18 memory_monitor_summary.json
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas        95 May  3 01:18 pilot_heartbeat.json
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas   1508687 May  3 01:18 agis_ddmendpoints.agis.ALL.json
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas    425139 May  3 01:18 log.49263200._090947.job.log.tgz.1
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas      6394 May  3 01:18 heartbeat_new.json
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas      6285 May  3 01:18 heartbeat.json
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas      4804 May  3 01:19 pilotlog.txt
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas   2561739 May  3 01:19 log.49263200._090947.job.log.1
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas       357 May  3 01:19 output.list
2026-05-02 21:19:07 (3436): Guest Log: -rw-r--r--. 1 atlas atlas       410 May  3 01:19 runtime_log
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas   3000320 May  3 01:19 result.tar.gz
2026-05-02 21:19:07 (3436): Guest Log: -rw-r--r--. 1 atlas atlas      8408 May  3 01:19 runtime_log.err
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas       669 May  3 01:19 3169459b2322.diag
2026-05-02 21:19:07 (3436): Guest Log: Looking for outputfile HITS.49263200._090947.pool.root.1
2026-05-02 21:19:07 (3436): Guest Log: HITS file was successfully produced
2026-05-02 21:19:07 (3436): Guest Log: -rw-------. 1 atlas atlas 191538094 May  3 01:17 /home/atlas/RunAtlas/HITS.49263200._090947.pool.root.1
2026-05-02 21:19:08 (3436): Guest Log: Successfully finished the ATLAS job!
2026-05-02 21:19:08 (3436): Guest Log: Copying the results back to the shared directory!
2026-05-02 21:19:08 (3436): Guest Log:  *** Contents of shared directory: ***
2026-05-02 21:19:09 (3436): Guest Log: total 409492
2026-05-02 21:19:09 (3436): Guest Log: -rwxrwxrwx. 1 root root 224047882 May  2 17:17 ATLAS.root_0
2026-05-02 21:19:09 (3436): Guest Log: -rwxrwxrwx. 1 root root 191538094 May  3 01:19 HITS.pool.root.1
2026-05-02 21:19:09 (3436): Guest Log: -rwxrwxrwx. 1 root root      8065 May  2 17:17 init_data.xml
2026-05-02 21:19:09 (3436): Guest Log: -rwxrwxrwx. 1 root root    697428 May  2 17:16 input.tar.gz
2026-05-02 21:19:09 (3436): Guest Log: -rwxrwxrwx. 1 root root   3000320 May  3 01:19 result.tar.gz
2026-05-02 21:19:09 (3436): Guest Log: -rwxrwxrwx. 1 root root     15667 May  2 17:16 start_atlas.sh
2026-05-02 21:19:09 (3436): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-02 21:19:09 (3436): VM Completion File Detected.
2026-05-02 21:19:09 (3436): Powering off VM.
2026-05-02 21:19:11 (3436): Successfully stopped VM.
2026-05-02 21:19:12 (3436): Deregistering VM. (boinc_fe47f0b56c71f144, slot#0)
2026-05-02 21:19:12 (3436): Removing network bandwidth throttle group from VM.
2026-05-02 21:19:12 (3436): Removing VM from VirtualBox.
2026-05-02 21:19:17 (3436): called boinc_finish(0)

</stderr_txt>
]]>

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