Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:01:06 (935384): wrapper (7.7.26015): starting
09:01:06 (935384): wrapper: running run_atlas (--nthreads 12)
[2026-05-03 09:01:06] Arguments: --nthreads 12
[2026-05-03 09:01:06] Threads: 12
[2026-05-03 09:01:06] Checking for CVMFS
[2026-05-03 09:01:06] No cvmfs_config command found, will try listing directly
[2026-05-03 09:01:06] CVMFS is ok
[2026-05-03 09:01:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 09:01:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 09:01:06] Further information can be found at the LHC@home message board.
[2026-05-03 09:01:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 09:01:06] Checking for apptainer binary...
[2026-05-03 09:01:06] which: no apptainer in ((null))
[2026-05-03 09:01:06] apptainer is not installed, using version from CVMFS
[2026-05-03 09:01:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 09:01:06] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-05-03 09:01:06] apptainer works
[2026-05-03 09:01:06] Set ATHENA_PROC_NUMBER=12
[2026-05-03 09:01:06] Set ATHENA_CORE_NUMBER=12
[2026-05-03 09:01:06] Starting ATLAS job with PandaID=7126567576
[2026-05-03 09:01:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 09:30:25]  *** The last 200 lines of the pilot log: ***
[2026-05-03 09:30:25]  filetype=log
[2026-05-03 09:30:25]  guid=d8d66843-afb2-40c4-a637-68160382d5a3
[2026-05-03 09:30:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-03 09:30:25]  is_altstaged=None
[2026-05-03 09:30:25]  is_tar=False
[2026-05-03 09:30:25]  lfn=log.49263191._088761.job.log.tgz.1
[2026-05-03 09:30:25]  mtime=0
[2026-05-03 09:30:25]  protocol_id=None
[2026-05-03 09:30:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-03 09:30:25]  replicas=None
[2026-05-03 09:30:25]  scope=mc23_13p6TeV
[2026-05-03 09:30:25]  status=None
[2026-05-03 09:30:25]  status_code=0
[2026-05-03 09:30:25]  storage_token=
[2026-05-03 09:30:25]  surl=/var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7126567576/log.49263191._088761.job.log.tgz.1
[2026-05-03 09:30:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/38/log.49263191._088761.job.log.tgz.1
[2026-05-03 09:30:25]  workdir=None
[2026-05-03 09:30:25] ]
[2026-05-03 09:30:25] 2026-05-03 07:29:22,554 | INFO     | transferring file log.49263191._088761.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7126567576/log.49263191._088761.job.log.tgz.1 to /var/lib/
[2026-05-03 09:30:25] 2026-05-03 07:29:22,554 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7126567576/log.49263191._088761.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/1/
[2026-05-03 09:30:25] 2026-05-03 07:29:22,568 | INFO     | adding to output.list: log.49263191._088761.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/38/log.49263191._088761.job.log.tg
[2026-05-03 09:30:25] 2026-05-03 07:29:22,568 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-03 09:30:25] 2026-05-03 07:29:22,568 | INFO     | summary of transferred files:
[2026-05-03 09:30:25] 2026-05-03 07:29:22,568 | INFO     |  -- lfn=log.49263191._088761.job.log.tgz.1, status_code=0, status=transferred
[2026-05-03 09:30:25] 2026-05-03 07:29:22,568 | INFO     | stage-out finished correctly
[2026-05-03 09:30:25] 2026-05-03 07:29:22,929 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-03 09:30:25] 2026-05-03 07:29:25,278 | INFO     | job 7126567576 has state=finished
[2026-05-03 09:30:25] 2026-05-03 07:29:25,279 | INFO     | preparing for final server update for job 7126567576 in state='finished'
[2026-05-03 09:30:25] 2026-05-03 07:29:25,279 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7126567576/jobReport.json
[2026-05-03 09:30:25] 2026-05-03 07:29:25,281 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/1/workernode_map.json
[2026-05-03 09:30:25] 2026-05-03 07:29:25,281 | INFO     | this job has now completed (state=finished)
[2026-05-03 09:30:25] 2026-05-03 07:29:25,281 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 09:30:25] 2026-05-03 07:29:25,281 | INFO     | log transfer has been attempted: DONE
[2026-05-03 09:30:25] 2026-05-03 07:29:25,281 | INFO     | job 7126567576 has finished - writing final server update
[2026-05-03 09:30:25] 2026-05-03 07:29:25,282 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3297872/.job.ad'
[2026-05-03 09:30:25] 2026-05-03 07:29:25,282 | INFO     | total number of processed events: 400 (read)
[2026-05-03 09:30:25] 2026-05-03 07:29:25,300 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7126567576/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 09:30:25] 2026-05-03 07:29:25,300 | INFO     | extracted standard info from prmon json
[2026-05-03 09:30:25] 2026-05-03 07:29:25,300 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 09:30:25] 2026-05-03 07:29:25,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 09:30:25] 2026-05-03 07:29:25,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 09:30:25] 2026-05-03 07:29:25,301 | INFO     | fitting pss+swap vs Time
[2026-05-03 09:30:25] 2026-05-03 07:29:25,301 | INFO     | sum of square deviations: 2865170.0
[2026-05-03 09:30:25] 2026-05-03 07:29:25,301 | INFO     | sum of deviations: -12504939.0
[2026-05-03 09:30:25] 2026-05-03 07:29:25,301 | INFO     | mean x (centered): 0.0
[2026-05-03 09:30:25] 2026-05-03 07:29:25,301 | INFO     | mean y: 2693036.0
[2026-05-03 09:30:25] 2026-05-03 07:29:25,301 | INFO     | intersect: 2693036.0
[2026-05-03 09:30:25] 2026-05-03 07:29:25,301 | INFO     | chi2: 0.0005062729698916348
[2026-05-03 09:30:25] 2026-05-03 07:29:25,301 | INFO     | current memory leak: -4.36 B/s (using 21 data points, chi2=0.00)
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | could have reported an average CPU frequency of 3605 MHz (4 samples)
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | ..............................
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | . Timing measurements:
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | . get job = 0 s
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | . initial setup = 4 s
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | . payload setup = 5 s
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | . stage-in = 0 s
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | . payload execution = 1664 s
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | . stage-out = 0 s
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | . log creation = 0 s
[2026-05-03 09:30:25] 2026-05-03 07:29:25,302 | INFO     | ..............................
[2026-05-03 09:30:25] 2026-05-03 07:29:25,751 | INFO     | 
[2026-05-03 09:30:25] 2026-05-03 07:29:25,751 | INFO     | job summary report
[2026-05-03 09:30:25] 2026-05-03 07:29:25,751 | INFO     | --------------------------------------------------
[2026-05-03 09:30:25] 2026-05-03 07:29:25,751 | INFO     | PanDA job id: 7126567576
[2026-05-03 09:30:25] 2026-05-03 07:29:25,751 | INFO     | task id: 49263191
[2026-05-03 09:30:25] 2026-05-03 07:29:25,751 | INFO     | errors: (none)
[2026-05-03 09:30:25] 2026-05-03 07:29:25,751 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | pilot state: finished 
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | transexitcode: 0
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | exeerrorcode: 0
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | exeerrordiag: 
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | exitcode: 0
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | exitmsg: OK
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | cpuconsumptiontime: 18044 s
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | nevents: 400
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | neventsw: 0
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | pid: 946097
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | pgrp: 946097
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | corecount: 12
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | event service: False
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | sizes: {0: 2275319, 1: 2277148, 11: 2277148, 1674: 2301984, 1675: 2311006, 1676: 2311062, 1678: 2311384}
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | --------------------------------------------------
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | 
[2026-05-03 09:30:25] 2026-05-03 07:29:25,752 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/1
[2026-05-03 09:30:25] 2026-05-03 07:29:25,777 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 09:30:25] 2026-05-03 07:29:25,778 | INFO     | job 7126567576 has completed (purged errors)
[2026-05-03 09:30:25] 2026-05-03 07:29:25,779 | INFO     | overall cleanup function is called
[2026-05-03 09:30:25] 2026-05-03 07:29:26,786 | INFO     | --- collectZombieJob: --- 10, [946097]
[2026-05-03 09:30:25] 2026-05-03 07:29:26,786 | INFO     | zombie collector waiting for pid 946097
[2026-05-03 09:30:25] 2026-05-03 07:29:26,787 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 09:30:25] 2026-05-03 07:29:26,787 | INFO     | collected zombie processes
[2026-05-03 09:30:25] 2026-05-03 07:29:26,787 | INFO     | will attempt to kill all subprocesses of pid=946097
[2026-05-03 09:30:25] 2026-05-03 07:29:26,969 | INFO     | PID=940032 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-03 09:30:25] 2026-05-03 07:29:26,969 | INFO     | .. there are 13 such processes running
[2026-05-03 09:30:25] 2026-05-03 07:29:27,084 | INFO     | process IDs to be killed: [946097] (in reverse order)
[2026-05-03 09:30:25] 2026-05-03 07:29:27,221 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 09:30:25] 2026-05-03 07:29:27,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 09:30:25] 2026-05-03 07:29:27,245 | INFO     | did not find any defunct processes belonging to 946097
[2026-05-03 09:30:25] 2026-05-03 07:29:27,263 | INFO     | did not find any defunct processes belonging to 946097
[2026-05-03 09:30:25] 2026-05-03 07:29:27,264 | INFO     | Ready for new job
[2026-05-03 09:30:25] 2026-05-03 07:29:27,264 | INFO     | ***************************************
[2026-05-03 09:30:25] 2026-05-03 07:29:27,265 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 09:30:25] 2026-05-03 07:29:27,265 | INFO     | ***************************************
[2026-05-03 09:30:25] 2026-05-03 07:29:27,265 | INFO     | 
[2026-05-03 09:30:25] 2026-05-03 07:29:27,270 | INFO     | architecture information:
[2026-05-03 09:30:25] 2026-05-03 07:29:27,270 | INFO     | executing command: cat /etc/os-release
[2026-05-03 09:30:25] 2026-05-03 07:29:27,283 | INFO     | cat /etc/os-release:
[2026-05-03 09:30:25] NAME="CentOS Linux"
[2026-05-03 09:30:25] VERSION="7 (Core)"
[2026-05-03 09:30:25] ID="centos"
[2026-05-03 09:30:25] ID_LIKE="rhel fedora"
[2026-05-03 09:30:25] VERSION_ID="7"
[2026-05-03 09:30:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 09:30:25] ANSI_COLOR="0;31"
[2026-05-03 09:30:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 09:30:25] HOME_URL="https://www.centos.org/"
[2026-05-03 09:30:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 09:30:25] 
[2026-05-03 09:30:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 09:30:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 09:30:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 09:30:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 09:30:25] 
[2026-05-03 09:30:25] 2026-05-03 07:29:27,284 | INFO     | ***************************************
[2026-05-03 09:30:25] 2026-05-03 07:29:27,787 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/1
[2026-05-03 09:30:25] 2026-05-03 07:29:27,800 | INFO     | sufficient remaining disk space (282268270592 B)
[2026-05-03 09:30:25] 2026-05-03 07:29:27,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 09:30:25] 2026-05-03 07:29:27,800 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 09:30:25] 2026-05-03 07:29:27,800 | INFO     | update_server=False
[2026-05-03 09:30:25] 2026-05-03 07:29:27,800 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 09:30:25] 2026-05-03 07:29:27,800 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-03 09:30:25] 2026-05-03 07:29:27,801 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 09:30:25] 2026-05-03 07:29:27,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 09:30:25] 2026-05-03 07:29:27,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 09:30:25] 2026-05-03 07:29:27,981 | INFO     | all payload control threads have been joined
[2026-05-03 09:30:25] 2026-05-03 07:29:28,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 09:30:25] 2026-05-03 07:29:28,168 | WARNING  | process 946097 can no longer be monitored (due to stat problems) - aborting
[2026-05-03 09:30:25] 2026-05-03 07:29:28,426 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 09:30:25] 2026-05-03 07:29:28,474 | INFO     | all job control threads have been joined
[2026-05-03 09:30:25] 2026-05-03 07:29:28,672 | INFO     | all data control threads have been joined
[2026-05-03 09:30:25] 2026-05-03 07:29:28,708 | INFO     | number of running child processes to parent process 946097: 1
[2026-05-03 09:30:25] 2026-05-03 07:29:28,709 | INFO     | maximum number of monitored processes: 6
[2026-05-03 09:30:25] 2026-05-03 07:29:28,709 | INFO     | aborting job monitoring since job object (job id=7126567576) has expired
[2026-05-03 09:30:25] 2026-05-03 07:29:28,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 09:30:25] 2026-05-03 07:29:28,709 | INFO     | will abort loop
[2026-05-03 09:30:25] 2026-05-03 07:29:28,805 | INFO     | [job] retrieve thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:28,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 09:30:25] 2026-05-03 07:29:28,986 | INFO     | [payload] control thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:29,092 | INFO     | [payload] validate_post thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:29,375 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:29,478 | INFO     | [job] control thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:29,678 | INFO     | [data] control thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:29,714 | INFO     | [job] job monitor thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:29,728 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:29,750 | INFO     | [job] validate thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:29,900 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:29,991 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:30,128 | INFO     | [data] copytool_out thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:30,154 | INFO     | [payload] failed_post thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:30,166 | INFO     | [data] copytool_in thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:30,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 09:30:25] 2026-05-03 07:29:31,367 | INFO     | [job] queue monitor thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:29:32,991 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 09:30:25] 2026-05-03 07:30:18,891 | INFO     | [monitor] cgroup control has ended
[2026-05-03 09:30:25] 2026-05-03 07:30:20,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22686595315520)>', '<ExcThread(monitor, started 22686362519296)>']
[2026-05-03 09:30:25] 2026-05-03 07:30:21,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 09:30:25] 2026-05-03 07:30:21,056 | INFO     | [monitor] control thread has ended
[2026-05-03 09:30:25] 2026-05-03 07:30:25,384 | INFO     | all workflow threads have been joined
[2026-05-03 09:30:25] 2026-05-03 07:30:25,384 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 09:30:25] 2026-05-03 07:30:25,384 | INFO     | traces error code: 0
[2026-05-03 09:30:25] 2026-05-03 07:30:25,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 09:30:25] 2026-05-03 07:30:25,516 [wrapper] ==== pilot stdout END ====
[2026-05-03 09:30:25] 2026-05-03 07:30:25,519 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 09:30:25] 2026-05-03 07:30:25,521 [wrapper] pilotpid: 940032
[2026-05-03 09:30:25] 2026-05-03 07:30:25,524 [wrapper] Pilot exit status: 0
[2026-05-03 09:30:25] 2026-05-03 07:30:25,532 [wrapper] pandaids: 7126567576
[2026-05-03 09:30:25] 2026-05-03 07:30:25,626 [wrapper] cleanup supervisor_pilot 1072501 940033
[2026-05-03 09:30:25] 2026-05-03 07:30:25,628 [wrapper] Test setup, not cleaning
[2026-05-03 09:30:25] 2026-05-03 07:30:25,630 [wrapper] apfmon messages muted
[2026-05-03 09:30:25] 2026-05-03 07:30:25,631 [wrapper] ==== wrapper stdout END ====
[2026-05-03 09:30:25] 2026-05-03 07:30:25,633 [wrapper] ==== wrapper stderr END ====
[2026-05-03 09:30:25]  *** Error codes and diagnostics ***
[2026-05-03 09:30:25]     "exeErrorCode": 0,
[2026-05-03 09:30:25]     "pilotErrorCode": 0,
[2026-05-03 09:30:25]  *** Listing of results directory ***
[2026-05-03 09:30:25] total 413932
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc    683926 May  2 17:48 pilot3.tar.gz
[2026-05-03 09:30:25] -rwx------. 1 boinc boinc     36322 May  2 18:09 runpilot2-wrapper.sh
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc      5631 May  2 18:09 queuedata.json
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc       100 May  3 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 09:30:25] -rwxr-xr-x. 1 boinc boinc      7986 May  3 09:01 run_atlas
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc       105 May  3 09:01 job.xml
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc      6631 May  3 09:01 init_data.xml
[2026-05-03 09:30:25] -rw-r--r--. 2 boinc boinc 224189774 May  3 09:01 EVNT.49263189._001966.pool.root.1
[2026-05-03 09:30:25] -rw-r--r--. 2 boinc boinc     15667 May  3 09:01 start_atlas.sh
[2026-05-03 09:30:25] drwxrwx--x. 2 boinc boinc      4096 May  3 09:01 shared
[2026-05-03 09:30:25] -rw-r--r--. 2 boinc boinc    697416 May  3 09:01 input.tar.gz
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc         0 May  3 09:01 boinc_lockfile
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc      2576 May  3 09:01 pandaJob.out
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc   1002964 May  3 09:01 agis_schedconf.cvmfs.json
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc   1508687 May  3 09:01 agis_ddmendpoints.agis.ALL.json
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc       445 May  3 09:01 workernode_map.json
[2026-05-03 09:30:25] drwx------. 5 boinc boinc      4096 May  3 09:01 pilot3
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc        95 May  3 09:28 pilot_heartbeat.json
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc 194427257 May  3 09:28 HITS.49263191._088761.pool.root.1
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc       487 May  3 09:29 boinc_task_state.xml
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc      1023 May  3 09:29 memory_monitor_summary.json
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc    349624 May  3 09:29 log.49263191._088761.job.log.tgz.1
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc      6377 May  3 09:29 heartbeat_new.json
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc      6268 May  3 09:29 heartbeat.json
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc      8192 May  3 09:30 boinc_mmap_file
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc        27 May  3 09:30 wrapper_checkpoint.txt
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc      5093 May  3 09:30 pilotlog.txt
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc    204843 May  3 09:30 log.49263191._088761.job.log.1
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc       357 May  3 09:30 output.list
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc       410 May  3 09:30 runtime_log
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc    573440 May  3 09:30 result.tar.gz
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc      8846 May  3 09:30 runtime_log.err
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc       660 May  3 09:30 21c4845f3c73.diag
[2026-05-03 09:30:25] -rw-r--r--. 1 boinc boinc     21142 May  3 09:30 stderr.txt
[2026-05-03 09:30:25] HITS file was successfully produced:
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc 194427257 May  3 09:28 shared/HITS.pool.root.1
[2026-05-03 09:30:25]  *** Contents of shared directory: ***
[2026-05-03 09:30:25] total 410076
[2026-05-03 09:30:25] -rw-r--r--. 2 boinc boinc 224189774 May  3 09:01 ATLAS.root_0
[2026-05-03 09:30:25] -rw-r--r--. 2 boinc boinc     15667 May  3 09:01 start_atlas.sh
[2026-05-03 09:30:25] -rw-r--r--. 2 boinc boinc    697416 May  3 09:01 input.tar.gz
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc 194427257 May  3 09:28 HITS.pool.root.1
[2026-05-03 09:30:25] -rw-------. 1 boinc boinc    573440 May  3 09:30 result.tar.gz
09:30:27 (935384): run_atlas exited; CPU time 18090.968977
09:30:27 (935384): called boinc_finish(0)

</stderr_txt>
]]>

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