Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:02:42 (116888): wrapper (7.7.26015): starting
10:02:42 (116888): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 10:02:42] Arguments: --nthreads 8
[2026-05-02 10:02:42] Threads: 8
[2026-05-02 10:02:42] Checking for CVMFS
[2026-05-02 10:02:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 10:02:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 10:02:43] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 10:02:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 10:02:44] 2.13.3.0 8302 2817 83304 159132 2 84 37404434 39288833 7909 16776704 0 2112696 99.463 3031062 33533 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-02 10:02:44] CVMFS is ok
[2026-05-02 10:02:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 10:02:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 10:02:44] Further information can be found at the LHC@home message board.
[2026-05-02 10:02:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 10:02:44] Checking for apptainer binary...
[2026-05-02 10:02:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 10:02:44] Running /usr/bin/apptainer --version
[2026-05-02 10:02:44] apptainer version 1.4.5-3.el9
[2026-05-02 10:02:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 10:02:45] c-210-6.aglt2.org
[2026-05-02 10:02:45] apptainer works
[2026-05-02 10:02:45] Set ATHENA_PROC_NUMBER=8
[2026-05-02 10:02:45] Set ATHENA_CORE_NUMBER=8
[2026-05-02 10:02:46] Starting ATLAS job with PandaID=7114611338
[2026-05-02 10:02:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 21:31:06]  *** The last 200 lines of the pilot log: ***
[2026-05-02 21:31:06] 2026-05-03 01:30:17,006 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 21:31:06] 2026-05-03 01:30:17,120 | INFO     | job 7114611338 has state=finished
[2026-05-02 21:31:06] 2026-05-03 01:30:17,120 | INFO     | preparing for final server update for job 7114611338 in state='finished'
[2026-05-02 21:31:06] 2026-05-03 01:30:17,120 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7114611338/jobReport.json
[2026-05-02 21:31:06] 2026-05-03 01:30:17,123 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-05-02 21:31:06] 2026-05-03 01:30:17,124 | INFO     | this job has now completed (state=finished)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,124 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,124 | INFO     | log transfer has been attempted: DONE
[2026-05-02 21:31:06] 2026-05-03 01:30:17,124 | INFO     | job 7114611338 has finished - writing final server update
[2026-05-02 21:31:06] 2026-05-03 01:30:17,124 | INFO     | total number of processed events: 400 (read)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,131 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7114611338/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,132 | INFO     | extracted standard info from prmon json
[2026-05-02 21:31:06] 2026-05-03 01:30:17,132 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 21:31:06] 2026-05-03 01:30:17,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 21:31:06] 2026-05-03 01:30:17,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 21:31:06] 2026-05-03 01:30:17,145 | INFO     | fitting pss+swap vs Time
[2026-05-02 21:31:06] 2026-05-03 01:30:17,146 | INFO     | sum of square deviations: 95359101668.5275
[2026-05-02 21:31:06] 2026-05-03 01:30:17,157 | INFO     | sum of deviations: 182249432359.90005
[2026-05-02 21:31:06] 2026-05-03 01:30:17,158 | INFO     | mean x (centered): 0.0
[2026-05-02 21:31:06] 2026-05-03 01:30:17,158 | INFO     | mean y: 2521603.282962963
[2026-05-02 21:31:06] 2026-05-03 01:30:17,158 | INFO     | intersect: 2521603.282962963
[2026-05-02 21:31:06] 2026-05-03 01:30:17,159 | INFO     | chi2: 3.3793883147887653
[2026-05-02 21:31:06] 2026-05-03 01:30:17,160 | INFO     | sum of square deviations: 93255715677.21802
[2026-05-02 21:31:06] 2026-05-03 01:30:17,171 | INFO     | sum of deviations: 223581079962.25058
[2026-05-02 21:31:06] 2026-05-03 01:30:17,171 | INFO     | mean x (centered): 0.0
[2026-05-02 21:31:06] 2026-05-03 01:30:17,171 | INFO     | mean y: 2524581.165671642
[2026-05-02 21:31:06] 2026-05-03 01:30:17,171 | INFO     | intersect: 2524581.165671642
[2026-05-02 21:31:06] 2026-05-03 01:30:17,172 | INFO     | chi2: 2.697705175788436
[2026-05-02 21:31:06] 2026-05-03 01:30:17,172 | INFO     | current chi2=2.697705175788436 (change=20.171790735535502 %)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,173 | INFO     | right removable region: 669
[2026-05-02 21:31:06] 2026-05-03 01:30:17,174 | INFO     | sum of square deviations: 93255357607.21797
[2026-05-02 21:31:06] 2026-05-03 01:30:17,184 | INFO     | sum of deviations: 12738138375.435822
[2026-05-02 21:31:06] 2026-05-03 01:30:17,185 | INFO     | mean x (centered): 0.0
[2026-05-02 21:31:06] 2026-05-03 01:30:17,185 | INFO     | mean y: 2533871.752238806
[2026-05-02 21:31:06] 2026-05-03 01:30:17,185 | INFO     | intersect: 2533871.752238806
[2026-05-02 21:31:06] 2026-05-03 01:30:17,186 | INFO     | chi2: 0.8961429021258756
[2026-05-02 21:31:06] 2026-05-03 01:30:17,186 | INFO     | current chi2=0.8961429021258756 (change=73.48209739010444 %)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,187 | INFO     | sum of square deviations: 91182981026.64064
[2026-05-02 21:31:06] 2026-05-03 01:30:17,198 | INFO     | sum of deviations: -1367754856.9594193
[2026-05-02 21:31:06] 2026-05-03 01:30:17,198 | INFO     | mean x (centered): 0.0
[2026-05-02 21:31:06] 2026-05-03 01:30:17,198 | INFO     | mean y: 2534904.67518797
[2026-05-02 21:31:06] 2026-05-03 01:30:17,198 | INFO     | intersect: 2534904.67518797
[2026-05-02 21:31:06] 2026-05-03 01:30:17,199 | INFO     | chi2: 0.8603381481516299
[2026-05-02 21:31:06] 2026-05-03 01:30:17,199 | INFO     | current chi2=0.8603381481516299 (change=3.995429064863182 %)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,200 | INFO     | left removable region: 10
[2026-05-02 21:31:06] 2026-05-03 01:30:17,200 | INFO     | sum of square deviations: 88737120264.00296
[2026-05-02 21:31:06] 2026-05-03 01:30:17,211 | INFO     | sum of deviations: 40571879859.104706
[2026-05-02 21:31:06] 2026-05-03 01:30:17,211 | INFO     | mean x (centered): 0.0
[2026-05-02 21:31:06] 2026-05-03 01:30:17,212 | INFO     | mean y: 2538018.468892261
[2026-05-02 21:31:06] 2026-05-03 01:30:17,212 | INFO     | intersect: 2538018.468892261
[2026-05-02 21:31:06] 2026-05-03 01:30:17,213 | INFO     | chi2: 0.1695839432746649
[2026-05-02 21:31:06] 2026-05-03 01:30:17,213 | INFO     | current memory leak: 0.46 B/s (using 659 data points, chi2=0.17)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,214 | INFO     | could have reported an average CPU frequency of 2600 MHz (26 samples)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,214 | INFO     | ..............................
[2026-05-02 21:31:06] 2026-05-03 01:30:17,214 | INFO     | . Timing measurements:
[2026-05-02 21:31:06] 2026-05-03 01:30:17,214 | INFO     | . get job = 0 s
[2026-05-02 21:31:06] 2026-05-03 01:30:17,214 | INFO     | . initial setup = 23 s
[2026-05-02 21:31:06] 2026-05-03 01:30:17,215 | INFO     | . payload setup = 35 s
[2026-05-02 21:31:06] 2026-05-03 01:30:17,215 | INFO     | . stage-in = 0 s
[2026-05-02 21:31:06] 2026-05-03 01:30:17,215 | INFO     | . payload execution = 41133 s
[2026-05-02 21:31:06] 2026-05-03 01:30:17,215 | INFO     | . stage-out = 2 s
[2026-05-02 21:31:06] 2026-05-03 01:30:17,215 | INFO     | . log creation = 0 s
[2026-05-02 21:31:06] 2026-05-03 01:30:17,215 | INFO     | ..............................
[2026-05-02 21:31:06] 2026-05-03 01:30:17,657 | INFO     | 
[2026-05-02 21:31:06] 2026-05-03 01:30:17,657 | INFO     | job summary report
[2026-05-02 21:31:06] 2026-05-03 01:30:17,657 | INFO     | --------------------------------------------------
[2026-05-02 21:31:06] 2026-05-03 01:30:17,657 | INFO     | PanDA job id: 7114611338
[2026-05-02 21:31:06] 2026-05-03 01:30:17,658 | INFO     | task id: 49179868
[2026-05-02 21:31:06] 2026-05-03 01:30:17,658 | INFO     | errors: (none)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,658 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 21:31:06] 2026-05-03 01:30:17,658 | INFO     | pilot state: finished 
[2026-05-02 21:31:06] 2026-05-03 01:30:17,658 | INFO     | transexitcode: 0
[2026-05-02 21:31:06] 2026-05-03 01:30:17,659 | INFO     | exeerrorcode: 0
[2026-05-02 21:31:06] 2026-05-03 01:30:17,659 | INFO     | exeerrordiag: 
[2026-05-02 21:31:06] 2026-05-03 01:30:17,659 | INFO     | exitcode: 0
[2026-05-02 21:31:06] 2026-05-03 01:30:17,659 | INFO     | exitmsg: OK
[2026-05-02 21:31:06] 2026-05-03 01:30:17,659 | INFO     | cpuconsumptiontime: 90917 s
[2026-05-02 21:31:06] 2026-05-03 01:30:17,659 | INFO     | nevents: 400
[2026-05-02 21:31:06] 2026-05-03 01:30:17,659 | INFO     | neventsw: 0
[2026-05-02 21:31:06] 2026-05-03 01:30:17,660 | INFO     | pid: 133811
[2026-05-02 21:31:06] 2026-05-03 01:30:17,660 | INFO     | pgrp: 133811
[2026-05-02 21:31:06] 2026-05-03 01:30:17,660 | INFO     | corecount: 8
[2026-05-02 21:31:06] 2026-05-03 01:30:17,660 | INFO     | event service: False
[2026-05-02 21:31:06] 2026-05-03 01:30:17,660 | INFO     | sizes: {0: 2274687, 1: 2275372, 2: 2275400, 3: 2277229, 14: 2277229, 41172: 2320474, 41173: 2320601, 41175: 2329655, 41178: 2329711, 41179: 2329905}
[2026-05-02 21:31:06] 2026-05-03 01:30:17,660 | INFO     | --------------------------------------------------
[2026-05-02 21:31:06] 2026-05-03 01:30:17,661 | INFO     | 
[2026-05-02 21:31:06] 2026-05-03 01:30:17,661 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-05-02 21:31:06] 2026-05-03 01:30:17,681 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,681 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,682 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,682 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,683 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,683 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,683 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,684 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,684 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,685 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 21:31:06] 2026-05-03 01:30:17,685 | INFO     | job 7114611338 has completed (purged errors)
[2026-05-02 21:31:06] 2026-05-03 01:30:17,685 | INFO     | overall cleanup function is called
[2026-05-02 21:31:06] 2026-05-03 01:30:17,826 | INFO     | PID=120970 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-02 21:31:06] 2026-05-03 01:30:17,827 | INFO     | .. there are 7 such processes running
[2026-05-02 21:31:06] 2026-05-03 01:30:18,694 | INFO     | --- collectZombieJob: --- 10, [133811]
[2026-05-02 21:31:06] 2026-05-03 01:30:18,695 | INFO     | zombie collector waiting for pid 133811
[2026-05-02 21:31:06] 2026-05-03 01:30:18,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 21:31:06] 2026-05-03 01:30:18,695 | INFO     | collected zombie processes
[2026-05-02 21:31:06] 2026-05-03 01:30:18,695 | INFO     | will attempt to kill all subprocesses of pid=133811
[2026-05-02 21:31:06] 2026-05-03 01:30:18,881 | INFO     | process IDs to be killed: [133811] (in reverse order)
[2026-05-02 21:31:06] 2026-05-03 01:30:18,949 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 21:31:06] 2026-05-03 01:30:18,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 21:31:06] 2026-05-03 01:30:18,958 | INFO     | did not find any defunct processes belonging to 133811
[2026-05-02 21:31:06] 2026-05-03 01:30:18,965 | INFO     | did not find any defunct processes belonging to 133811
[2026-05-02 21:31:06] 2026-05-03 01:30:18,966 | INFO     | Ready for new job
[2026-05-02 21:31:06] 2026-05-03 01:30:18,969 | INFO     | ***************************************
[2026-05-02 21:31:06] 2026-05-03 01:30:18,969 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 21:31:06] 2026-05-03 01:30:18,970 | INFO     | ***************************************
[2026-05-02 21:31:06] 2026-05-03 01:30:18,970 | INFO     | 
[2026-05-02 21:31:06] 2026-05-03 01:30:18,972 | INFO     | architecture information:
[2026-05-02 21:31:06] 2026-05-03 01:30:18,972 | INFO     | executing command: cat /etc/os-release
[2026-05-02 21:31:06] 2026-05-03 01:30:18,988 | INFO     | cat /etc/os-release:
[2026-05-02 21:31:06] NAME="CentOS Linux"
[2026-05-02 21:31:06] VERSION="7 (Core)"
[2026-05-02 21:31:06] ID="centos"
[2026-05-02 21:31:06] ID_LIKE="rhel fedora"
[2026-05-02 21:31:06] VERSION_ID="7"
[2026-05-02 21:31:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 21:31:06] ANSI_COLOR="0;31"
[2026-05-02 21:31:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 21:31:06] HOME_URL="https://www.centos.org/"
[2026-05-02 21:31:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 21:31:06] 
[2026-05-02 21:31:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 21:31:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 21:31:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 21:31:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 21:31:06] 
[2026-05-02 21:31:06] 2026-05-03 01:30:18,989 | INFO     | ***************************************
[2026-05-02 21:31:06] 2026-05-03 01:30:19,490 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-05-02 21:31:06] 2026-05-03 01:30:19,506 | INFO     | sufficient remaining disk space (53159657472 B)
[2026-05-02 21:31:06] 2026-05-03 01:30:19,506 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 21:31:06] 2026-05-03 01:30:19,506 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 21:31:06] 2026-05-03 01:30:19,506 | INFO     | update_server=False
[2026-05-02 21:31:06] 2026-05-03 01:30:19,507 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 21:31:06] 2026-05-03 01:30:19,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 21:31:06] 2026-05-03 01:30:19,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 21:31:06] 2026-05-03 01:30:19,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 21:31:06] 2026-05-03 01:30:19,894 | INFO     | aborting loop
[2026-05-02 21:31:06] 2026-05-03 01:30:19,936 | INFO     | all data control threads have been joined
[2026-05-02 21:31:06] 2026-05-03 01:30:20,023 | INFO     | all job control threads have been joined
[2026-05-02 21:31:06] 2026-05-03 01:30:20,512 | INFO     | [job] retrieve thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:20,546 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:20,702 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:20,706 | INFO     | [job] validate thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:20,826 | INFO     | all payload control threads have been joined
[2026-05-02 21:31:06] 2026-05-03 01:30:20,900 | INFO     | [job] job monitor thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:20,906 | INFO     | [payload] failed_post thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:20,941 | INFO     | [data] control thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:21,028 | INFO     | [job] control thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:21,164 | INFO     | [data] copytool_in thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:21,513 | INFO     | [data] copytool_out thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:21,831 | INFO     | [payload] control thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:21,892 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:21,918 | INFO     | [payload] validate_post thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:22,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 21:31:06] 2026-05-03 01:30:23,334 | INFO     | [job] queue monitor thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:23,513 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:29,753 | INFO     | job.realtimelogging is not enabled
[2026-05-02 21:31:06] 2026-05-03 01:30:30,759 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 21:31:06] 2026-05-03 01:30:50,139 | INFO     | PID=120970 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-02 21:31:06] 2026-05-03 01:30:50,140 | INFO     | .. there are 7 such processes running
[2026-05-02 21:31:06] 2026-05-03 01:30:50,140 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 21:31:06] 2026-05-03 01:30:50,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 21:31:06] 2026-05-03 01:30:50,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 21:31:06] 2026-05-03 01:30:59,747 | INFO     | [monitor] cgroup control has ended
[2026-05-02 21:31:06] 2026-05-03 01:31:01,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607683635008)>', '<ExcThread(monitor, started 140607313909504)>']
[2026-05-02 21:31:06] 2026-05-03 01:31:02,200 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 21:31:06] 2026-05-03 01:31:02,200 | INFO     | [monitor] control thread has ended
[2026-05-02 21:31:06] 2026-05-03 01:31:06,321 | INFO     | all workflow threads have been joined
[2026-05-02 21:31:06] 2026-05-03 01:31:06,321 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 21:31:06] 2026-05-03 01:31:06,321 | INFO     | traces error code: 0
[2026-05-02 21:31:06] 2026-05-03 01:31:06,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 21:31:06] 2026-05-03 01:31:06,492 [wrapper] ==== pilot stdout END ====
[2026-05-02 21:31:06] 2026-05-03 01:31:06,496 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 21:31:06] 2026-05-03 01:31:06,500 [wrapper] pilotpid: 120970
[2026-05-02 21:31:06] 2026-05-03 01:31:06,504 [wrapper] Pilot exit status: 0
[2026-05-02 21:31:06] 2026-05-03 01:31:06,519 [wrapper] pandaids: 7114611338
[2026-05-02 21:31:06] 2026-05-03 01:31:06,570 [wrapper] cleanup supervisor_pilot 1091774 120971
[2026-05-02 21:31:06] 2026-05-03 01:31:06,574 [wrapper] Test setup, not cleaning
[2026-05-02 21:31:06] 2026-05-03 01:31:06,578 [wrapper] apfmon messages muted
[2026-05-02 21:31:06] 2026-05-03 01:31:06,581 [wrapper] ==== wrapper stdout END ====
[2026-05-02 21:31:06] 2026-05-03 01:31:06,585 [wrapper] ==== wrapper stderr END ====
[2026-05-02 21:31:06]  *** Error codes and diagnostics ***
[2026-05-02 21:31:06]     "exeErrorCode": 0,
[2026-05-02 21:31:06]     "pilotErrorCode": 0,
[2026-05-02 21:31:06]  *** Listing of results directory ***
[2026-05-02 21:31:06] total 415848
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas    683926 Apr 25 07:58 pilot3.tar.gz
[2026-05-02 21:31:06] -rwx------. 1 boincer umatlas     36322 Apr 25 08:11 runpilot2-wrapper.sh
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas      5631 Apr 25 08:18 queuedata.json
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas       100 May  2 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 21:31:06] -rwxr-xr-x. 1 boincer umatlas      7986 May  2 10:02 run_atlas
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas       105 May  2 10:02 job.xml
[2026-05-02 21:31:06] -rw-r--r--. 2 boincer umatlas 219614517 May  2 10:02 EVNT.49132308._000005.pool.root.1
[2026-05-02 21:31:06] -rw-r--r--. 2 boincer umatlas     15667 May  2 10:02 start_atlas.sh
[2026-05-02 21:31:06] drwxrwx--x. 2 boincer umatlas      4096 May  2 10:02 shared
[2026-05-02 21:31:06] -rw-r--r--. 2 boincer umatlas    697423 May  2 10:02 input.tar.gz
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas         0 May  2 10:02 boinc_lockfile
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas      2587 May  2 10:02 pandaJob.out
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas        57 May  2 10:02 setup.sh.local
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas   1002984 May  2 10:03 agis_schedconf.cvmfs.json
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas       441 May  2 10:03 workernode_map.json
[2026-05-02 21:31:06] drwx------. 5 boincer umatlas      4096 May  2 10:03 pilot3
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas      6573 May  2 21:19 init_data.xml
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas 193800186 May  2 21:29 HITS.49179868._000569.pool.root.1
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas       488 May  2 21:29 boinc_task_state.xml
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas        95 May  2 21:29 pilot_heartbeat.json
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas      1056 May  2 21:30 memory_monitor_summary.json
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas   1508687 May  2 21:30 agis_ddmendpoints.agis.ALL.json
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas    613249 May  2 21:30 log.49179868._000569.job.log.tgz.1
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas      6402 May  2 21:30 heartbeat_new.json
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas      6293 May  2 21:30 heartbeat.json
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas      8192 May  2 21:31 boinc_mmap_file
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas        28 May  2 21:31 wrapper_checkpoint.txt
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas      4893 May  2 21:31 pilotlog.txt
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas   3524845 May  2 21:31 log.49179868._000569.job.log.1
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas       357 May  2 21:31 output.list
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas       410 May  2 21:31 runtime_log
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas   4157440 May  2 21:31 result.tar.gz
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas      8960 May  2 21:31 runtime_log.err
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas       657 May  2 21:31 af5395c9021d.diag
[2026-05-02 21:31:06] -rw-r--r--. 1 boincer umatlas     21316 May  2 21:31 stderr.txt
[2026-05-02 21:31:06] HITS file was successfully produced:
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas 193800186 May  2 21:29 shared/HITS.pool.root.1
[2026-05-02 21:31:06]  *** Contents of shared directory: ***
[2026-05-02 21:31:06] total 408492
[2026-05-02 21:31:06] -rw-r--r--. 2 boincer umatlas 219614517 May  2 10:02 ATLAS.root_0
[2026-05-02 21:31:06] -rw-r--r--. 2 boincer umatlas     15667 May  2 10:02 start_atlas.sh
[2026-05-02 21:31:06] -rw-r--r--. 2 boincer umatlas    697423 May  2 10:02 input.tar.gz
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas 193800186 May  2 21:29 HITS.pool.root.1
[2026-05-02 21:31:06] -rw-------. 1 boincer umatlas   4157440 May  2 21:31 result.tar.gz
21:31:08 (116888): run_atlas exited; CPU time 91818.774775
21:31:08 (116888): called boinc_finish(0)

</stderr_txt>
]]>

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