Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:49:29 (31832): wrapper (7.7.26015): starting
08:49:29 (31832): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 08:49:29] Arguments: --nthreads 8
[2026-05-02 08:49:29] Threads: 8
[2026-05-02 08:49:29] Checking for CVMFS
[2026-05-02 08:49:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 08:49:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 08:49:30] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 08:49:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 08:49:30] 2.11.4.0 31920 208664 78608 159131 3 32 17955125 18432000 1831 130560 0 107681115 99.990 6953032 22417 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-02 08:49:30] CVMFS is ok
[2026-05-02 08:49:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 08:49:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 08:49:30] Further information can be found at the LHC@home message board.
[2026-05-02 08:49:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 08:49:30] Checking for apptainer binary...
[2026-05-02 08:49:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 08:49:30] Running /usr/bin/apptainer --version
[2026-05-02 08:49:30] apptainer version 1.3.2-1.el7
[2026-05-02 08:49:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 08:49:31] c-206-22.aglt2.org
[2026-05-02 08:49:31] apptainer works
[2026-05-02 08:49:31] Set ATHENA_PROC_NUMBER=8
[2026-05-02 08:49:31] Set ATHENA_CORE_NUMBER=8
[2026-05-02 08:49:31] Starting ATLAS job with PandaID=7114617240
[2026-05-02 08:49:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 11:07:05]  *** The last 200 lines of the pilot log: ***
[2026-05-02 11:07:05] 2026-05-02 15:06:48,899 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-05-02 11:07:05] 2026-05-02 15:06:48,899 | INFO     | this job has now completed (state=finished)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,900 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,900 | INFO     | log transfer has been attempted: DONE
[2026-05-02 11:07:05] 2026-05-02 15:06:48,900 | INFO     | job 7114617240 has finished - writing final server update
[2026-05-02 11:07:05] 2026-05-02 15:06:48,900 | INFO     | total number of processed events: 400 (read)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,903 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7114617240/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,903 | INFO     | extracted standard info from prmon json
[2026-05-02 11:07:05] 2026-05-02 15:06:48,903 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 11:07:05] 2026-05-02 15:06:48,903 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 11:07:05] 2026-05-02 15:06:48,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 11:07:05] 2026-05-02 15:06:48,906 | INFO     | fitting pss+swap vs Time
[2026-05-02 11:07:05] 2026-05-02 15:06:48,906 | INFO     | sum of square deviations: 762879420.0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,906 | INFO     | sum of deviations: -4608135321.999999
[2026-05-02 11:07:05] 2026-05-02 15:06:48,907 | INFO     | mean x (centered): 0.0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,907 | INFO     | mean y: 2505212.0444444446
[2026-05-02 11:07:05] 2026-05-02 15:06:48,907 | INFO     | intersect: 2505212.0444444446
[2026-05-02 11:07:05] 2026-05-02 15:06:48,907 | INFO     | chi2: 2.2897248121265252
[2026-05-02 11:07:05] 2026-05-02 15:06:48,907 | INFO     | sum of square deviations: 681212772.5
[2026-05-02 11:07:05] 2026-05-02 15:06:48,908 | INFO     | sum of deviations: 4489285087.499998
[2026-05-02 11:07:05] 2026-05-02 15:06:48,908 | INFO     | mean x (centered): 0.0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,908 | INFO     | mean y: 2521696.9
[2026-05-02 11:07:05] 2026-05-02 15:06:48,908 | INFO     | intersect: 2521696.9
[2026-05-02 11:07:05] 2026-05-02 15:06:48,908 | INFO     | chi2: 1.5200056865854379
[2026-05-02 11:07:05] 2026-05-02 15:06:48,908 | INFO     | current chi2=1.5200056865854379 (change=33.61622852949869 %)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,909 | INFO     | sum of square deviations: 605592750.0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,909 | INFO     | sum of deviations: 4426459205.000001
[2026-05-02 11:07:05] 2026-05-02 15:06:48,909 | INFO     | mean x (centered): 0.0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,909 | INFO     | mean y: 2521570.208
[2026-05-02 11:07:05] 2026-05-02 15:06:48,910 | INFO     | intersect: 2521570.208
[2026-05-02 11:07:05] 2026-05-02 15:06:48,910 | INFO     | chi2: 1.5216330051422993
[2026-05-02 11:07:05] 2026-05-02 15:06:48,910 | INFO     | current chi2=1.5216330051422993 (change=-0.10706003084218786 %)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,910 | INFO     | right removable region: 124
[2026-05-02 11:07:05] 2026-05-02 15:06:48,910 | INFO     | sum of square deviations: 681212772.5
[2026-05-02 11:07:05] 2026-05-02 15:06:48,911 | INFO     | sum of deviations: -24208747035.5
[2026-05-02 11:07:05] 2026-05-02 15:06:48,911 | INFO     | mean x (centered): 0.0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,911 | INFO     | mean y: 2541184.1615384617
[2026-05-02 11:07:05] 2026-05-02 15:06:48,911 | INFO     | intersect: 2541184.1615384617
[2026-05-02 11:07:05] 2026-05-02 15:06:48,911 | INFO     | chi2: 0.9076731752938618
[2026-05-02 11:07:05] 2026-05-02 15:06:48,911 | INFO     | current chi2=0.9076731752938618 (change=60.358853147471336 %)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,912 | INFO     | sum of square deviations: 605592750.0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,912 | INFO     | sum of deviations: -20736051775.0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,912 | INFO     | mean x (centered): 0.0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,912 | INFO     | mean y: 2534158.608
[2026-05-02 11:07:05] 2026-05-02 15:06:48,912 | INFO     | intersect: 2534158.608
[2026-05-02 11:07:05] 2026-05-02 15:06:48,913 | INFO     | chi2: 0.903981589146304
[2026-05-02 11:07:05] 2026-05-02 15:06:48,913 | INFO     | current chi2=0.903981589146304 (change=0.4067087414324723 %)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,913 | INFO     | left removable region: 10
[2026-05-02 11:07:05] 2026-05-02 15:06:48,913 | INFO     | sum of square deviations: 459366752.5
[2026-05-02 11:07:05] 2026-05-02 15:06:48,914 | INFO     | sum of deviations: -11116322952.5
[2026-05-02 11:07:05] 2026-05-02 15:06:48,914 | INFO     | mean x (centered): 0.0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,914 | INFO     | mean y: 2554719.4122807016
[2026-05-02 11:07:05] 2026-05-02 15:06:48,914 | INFO     | intersect: 2554719.4122807016
[2026-05-02 11:07:05] 2026-05-02 15:06:48,914 | INFO     | chi2: 0.09553539618832452
[2026-05-02 11:07:05] 2026-05-02 15:06:48,914 | INFO     | current memory leak: -24.20 B/s (using 114 data points, chi2=0.10)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,914 | INFO     | could have reported an average CPU frequency of 2505 MHz (8 samples)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,915 | INFO     | ..............................
[2026-05-02 11:07:05] 2026-05-02 15:06:48,915 | INFO     | . Timing measurements:
[2026-05-02 11:07:05] 2026-05-02 15:06:48,915 | INFO     | . get job = 0 s
[2026-05-02 11:07:05] 2026-05-02 15:06:48,915 | INFO     | . initial setup = 5 s
[2026-05-02 11:07:05] 2026-05-02 15:06:48,915 | INFO     | . payload setup = 8 s
[2026-05-02 11:07:05] 2026-05-02 15:06:48,915 | INFO     | . stage-in = 0 s
[2026-05-02 11:07:05] 2026-05-02 15:06:48,915 | INFO     | . payload execution = 8195 s
[2026-05-02 11:07:05] 2026-05-02 15:06:48,915 | INFO     | . stage-out = 0 s
[2026-05-02 11:07:05] 2026-05-02 15:06:48,915 | INFO     | . log creation = 0 s
[2026-05-02 11:07:05] 2026-05-02 15:06:48,915 | INFO     | ..............................
[2026-05-02 11:07:05] 2026-05-02 15:06:48,989 | INFO     | 
[2026-05-02 11:07:05] 2026-05-02 15:06:48,989 | INFO     | job summary report
[2026-05-02 11:07:05] 2026-05-02 15:06:48,989 | INFO     | --------------------------------------------------
[2026-05-02 11:07:05] 2026-05-02 15:06:48,989 | INFO     | PanDA job id: 7114617240
[2026-05-02 11:07:05] 2026-05-02 15:06:48,989 | INFO     | task id: 49499479
[2026-05-02 11:07:05] 2026-05-02 15:06:48,989 | INFO     | errors: (none)
[2026-05-02 11:07:05] 2026-05-02 15:06:48,990 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 11:07:05] 2026-05-02 15:06:48,990 | INFO     | pilot state: finished 
[2026-05-02 11:07:05] 2026-05-02 15:06:48,990 | INFO     | transexitcode: 0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,990 | INFO     | exeerrorcode: 0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,990 | INFO     | exeerrordiag: 
[2026-05-02 11:07:05] 2026-05-02 15:06:48,990 | INFO     | exitcode: 0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,990 | INFO     | exitmsg: OK
[2026-05-02 11:07:05] 2026-05-02 15:06:48,990 | INFO     | cpuconsumptiontime: 62229 s
[2026-05-02 11:07:05] 2026-05-02 15:06:48,990 | INFO     | nevents: 400
[2026-05-02 11:07:05] 2026-05-02 15:06:48,990 | INFO     | neventsw: 0
[2026-05-02 11:07:05] 2026-05-02 15:06:48,991 | INFO     | pid: 8065
[2026-05-02 11:07:05] 2026-05-02 15:06:48,991 | INFO     | pgrp: 8065
[2026-05-02 11:07:05] 2026-05-02 15:06:48,991 | INFO     | corecount: 8
[2026-05-02 11:07:05] 2026-05-02 15:06:48,991 | INFO     | event service: False
[2026-05-02 11:07:05] 2026-05-02 15:06:48,991 | INFO     | sizes: {0: 2275585, 1: 2277187, 11: 2277187, 8207: 2304990, 8208: 2313988, 8209: 2314044, 8210: 2314366}
[2026-05-02 11:07:05] 2026-05-02 15:06:48,991 | INFO     | --------------------------------------------------
[2026-05-02 11:07:05] 2026-05-02 15:06:48,991 | INFO     | 
[2026-05-02 11:07:05] 2026-05-02 15:06:48,991 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-05-02 11:07:05] 2026-05-02 15:06:49,006 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,006 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,006 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,007 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,008 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,008 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 11:07:05] 2026-05-02 15:06:49,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,008 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 11:07:05] 2026-05-02 15:06:49,008 | INFO     | job 7114617240 has completed (purged errors)
[2026-05-02 11:07:05] 2026-05-02 15:06:49,009 | INFO     | overall cleanup function is called
[2026-05-02 11:07:05] 2026-05-02 15:06:50,016 | INFO     | --- collectZombieJob: --- 10, [8065]
[2026-05-02 11:07:05] 2026-05-02 15:06:50,016 | INFO     | zombie collector waiting for pid 8065
[2026-05-02 11:07:05] 2026-05-02 15:06:50,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 11:07:05] 2026-05-02 15:06:50,016 | INFO     | collected zombie processes
[2026-05-02 11:07:05] 2026-05-02 15:06:50,016 | INFO     | will attempt to kill all subprocesses of pid=8065
[2026-05-02 11:07:05] 2026-05-02 15:06:50,099 | INFO     | process IDs to be killed: [8065] (in reverse order)
[2026-05-02 11:07:05] 2026-05-02 15:06:50,135 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 11:07:05] 2026-05-02 15:06:50,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 11:07:05] 2026-05-02 15:06:50,138 | INFO     | did not find any defunct processes belonging to 8065
[2026-05-02 11:07:05] 2026-05-02 15:06:50,140 | INFO     | did not find any defunct processes belonging to 8065
[2026-05-02 11:07:05] 2026-05-02 15:06:50,140 | INFO     | Ready for new job
[2026-05-02 11:07:05] 2026-05-02 15:06:50,141 | INFO     | ***************************************
[2026-05-02 11:07:05] 2026-05-02 15:06:50,141 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 11:07:05] 2026-05-02 15:06:50,141 | INFO     | ***************************************
[2026-05-02 11:07:05] 2026-05-02 15:06:50,142 | INFO     | 
[2026-05-02 11:07:05] 2026-05-02 15:06:50,142 | INFO     | architecture information:
[2026-05-02 11:07:05] 2026-05-02 15:06:50,143 | INFO     | executing command: cat /etc/os-release
[2026-05-02 11:07:05] 2026-05-02 15:06:50,155 | INFO     | cat /etc/os-release:
[2026-05-02 11:07:05] NAME="CentOS Linux"
[2026-05-02 11:07:05] VERSION="7 (Core)"
[2026-05-02 11:07:05] ID="centos"
[2026-05-02 11:07:05] ID_LIKE="rhel fedora"
[2026-05-02 11:07:05] VERSION_ID="7"
[2026-05-02 11:07:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 11:07:05] ANSI_COLOR="0;31"
[2026-05-02 11:07:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 11:07:05] HOME_URL="https://www.centos.org/"
[2026-05-02 11:07:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 11:07:05] 
[2026-05-02 11:07:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 11:07:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 11:07:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 11:07:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 11:07:05] 
[2026-05-02 11:07:05] 2026-05-02 15:06:50,155 | INFO     | ***************************************
[2026-05-02 11:07:05] 2026-05-02 15:06:50,658 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-05-02 11:07:05] 2026-05-02 15:06:50,669 | INFO     | sufficient remaining disk space (28815917056 B)
[2026-05-02 11:07:05] 2026-05-02 15:06:50,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 11:07:05] 2026-05-02 15:06:50,670 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 11:07:05] 2026-05-02 15:06:50,670 | INFO     | update_server=False
[2026-05-02 11:07:05] 2026-05-02 15:06:50,670 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 11:07:05] 2026-05-02 15:06:50,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 11:07:05] 2026-05-02 15:06:50,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 11:07:05] 2026-05-02 15:06:50,671 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-02 11:07:05] 2026-05-02 15:06:50,671 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 11:07:05] 2026-05-02 15:06:50,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 11:07:05] 2026-05-02 15:06:50,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 11:07:05] 2026-05-02 15:06:51,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 11:07:05] 2026-05-02 15:06:51,018 | INFO     | aborting loop
[2026-05-02 11:07:05] 2026-05-02 15:06:51,103 | INFO     | all job control threads have been joined
[2026-05-02 11:07:05] 2026-05-02 15:06:51,287 | INFO     | all data control threads have been joined
[2026-05-02 11:07:05] 2026-05-02 15:06:51,397 | INFO     | all payload control threads have been joined
[2026-05-02 11:07:05] 2026-05-02 15:06:51,675 | INFO     | [job] retrieve thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:51,676 | INFO     | [job] queue monitor thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:51,818 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:51,820 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:52,023 | INFO     | [job] job monitor thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:52,023 | INFO     | [data] copytool_in thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:52,108 | INFO     | [job] control thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:52,171 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:52,200 | INFO     | [payload] validate_post thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:52,293 | INFO     | [data] control thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:52,363 | INFO     | job.realtimelogging is not enabled
[2026-05-02 11:07:05] 2026-05-02 15:06:52,402 | INFO     | [payload] control thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:52,583 | INFO     | [job] validate thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:52,676 | INFO     | [data] copytool_out thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:52,704 | INFO     | [payload] failed_post thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:53,363 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:53,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 11:07:05] 2026-05-02 15:06:57,715 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 11:07:05] 2026-05-02 15:06:58,887 | INFO     | [monitor] cgroup control has ended
[2026-05-02 11:07:05] 2026-05-02 15:06:59,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736155862848)>', '<ExcThread(monitor, started 139735729161984)>']
[2026-05-02 11:07:05] 2026-05-02 15:07:00,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 11:07:05] 2026-05-02 15:07:00,723 | INFO     | [monitor] control thread has ended
[2026-05-02 11:07:05] 2026-05-02 15:07:04,950 | INFO     | all workflow threads have been joined
[2026-05-02 11:07:05] 2026-05-02 15:07:04,950 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 11:07:05] 2026-05-02 15:07:04,962 | INFO     | traces error code: 0
[2026-05-02 11:07:05] 2026-05-02 15:07:04,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 11:07:05] 2026-05-02 15:07:05,053 [wrapper] ==== pilot stdout END ====
[2026-05-02 11:07:05] 2026-05-02 15:07:05,055 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 11:07:05] 2026-05-02 15:07:05,057 [wrapper] pilotpid: 3517
[2026-05-02 11:07:05] 2026-05-02 15:07:05,059 [wrapper] Pilot exit status: 0
[2026-05-02 11:07:05] 2026-05-02 15:07:05,067 [wrapper] pandaids: 7114617240
[2026-05-02 11:07:05] 2026-05-02 15:07:05,093 [wrapper] cleanup supervisor_pilot 26584 3518
[2026-05-02 11:07:05] 2026-05-02 15:07:05,095 [wrapper] Test setup, not cleaning
[2026-05-02 11:07:05] 2026-05-02 15:07:05,098 [wrapper] apfmon messages muted
[2026-05-02 11:07:05] 2026-05-02 15:07:05,100 [wrapper] ==== wrapper stdout END ====
[2026-05-02 11:07:05] 2026-05-02 15:07:05,102 [wrapper] ==== wrapper stderr END ====
[2026-05-02 11:07:05]  *** Error codes and diagnostics ***
[2026-05-02 11:07:05]     "exeErrorCode": 0,
[2026-05-02 11:07:05]     "pilotErrorCode": 0,
[2026-05-02 11:07:05]  *** Listing of results directory ***
[2026-05-02 11:07:05] total 442556
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas    683926 Apr 25 07:58 pilot3.tar.gz
[2026-05-02 11:07:05] -rwx------ 1 boincer umatlas     36322 Apr 25 08:11 runpilot2-wrapper.sh
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas      5631 Apr 25 08:18 queuedata.json
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas       100 May  2 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 11:07:05] -rwxr-xr-x 1 boincer umatlas      7986 May  2 08:49 run_atlas
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas       105 May  2 08:49 job.xml
[2026-05-02 11:07:05] -rw-r--r-- 2 boincer umatlas 263313291 May  2 08:49 EVNT.49474258._000008.pool.root.1
[2026-05-02 11:07:05] -rw-r--r-- 2 boincer umatlas     15667 May  2 08:49 start_atlas.sh
[2026-05-02 11:07:05] drwxrwx--x 2 boincer umatlas      4096 May  2 08:49 shared
[2026-05-02 11:07:05] -rw-r--r-- 2 boincer umatlas    697424 May  2 08:49 input.tar.gz
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas         0 May  2 08:49 boinc_lockfile
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas      2576 May  2 08:49 pandaJob.out
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas        57 May  2 08:49 setup.sh.local
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas   1002968 May  2 08:49 agis_schedconf.cvmfs.json
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas   1508687 May  2 08:49 agis_ddmendpoints.agis.ALL.json
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas       445 May  2 08:49 workernode_map.json
[2026-05-02 11:07:05] drwx------ 5 boincer umatlas      4096 May  2 08:49 pilot3
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas      5866 May  2 11:00 init_data.xml
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas        95 May  2 11:06 pilot_heartbeat.json
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas 183504086 May  2 11:06 HITS.49499479._000302.pool.root.1
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas      1055 May  2 11:06 memory_monitor_summary.json
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas      8192 May  2 11:06 boinc_mmap_file
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas        27 May  2 11:06 wrapper_checkpoint.txt
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas    334877 May  2 11:06 log.49499479._000302.job.log.tgz.1
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas       487 May  2 11:06 boinc_task_state.xml
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas      6436 May  2 11:06 heartbeat_new.json
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas      6327 May  2 11:06 heartbeat.json
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas      4623 May  2 11:07 pilotlog.txt
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas    778572 May  2 11:07 log.49499479._000302.job.log.1
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas       357 May  2 11:07 output.list
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas       410 May  2 11:07 runtime_log
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas   1126400 May  2 11:07 result.tar.gz
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas      8964 May  2 11:07 runtime_log.err
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas       658 May  2 11:07 af53dceb4474.diag
[2026-05-02 11:07:05] -rw-r--r-- 1 boincer umatlas     20835 May  2 11:07 stderr.txt
[2026-05-02 11:07:05] HITS file was successfully produced:
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas 183504086 May  2 11:06 shared/HITS.pool.root.1
[2026-05-02 11:07:05]  *** Contents of shared directory: ***
[2026-05-02 11:07:05] total 438152
[2026-05-02 11:07:05] -rw-r--r-- 2 boincer umatlas 263313291 May  2 08:49 ATLAS.root_0
[2026-05-02 11:07:05] -rw-r--r-- 2 boincer umatlas     15667 May  2 08:49 start_atlas.sh
[2026-05-02 11:07:05] -rw-r--r-- 2 boincer umatlas    697424 May  2 08:49 input.tar.gz
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas 183504086 May  2 11:06 HITS.pool.root.1
[2026-05-02 11:07:05] -rw------- 1 boincer umatlas   1126400 May  2 11:07 result.tar.gz
11:07:06 (31832): run_atlas exited; CPU time 62183.476797
11:07:06 (31832): called boinc_finish(0)

</stderr_txt>
]]>

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