Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:19:22 (23125): wrapper (7.7.26015): starting
05:19:22 (23125): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 05:19:22] Arguments: --nthreads 8
[2026-05-02 05:19:22] Threads: 8
[2026-05-02 05:19:22] Checking for CVMFS
[2026-05-02 05:19:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 05:19:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 05:19:23] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 05:19:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 05:19:23] 2.11.2.0 2754 61662 81180 159125 1 49 16810965 20275200 1 130560 0 12832874 99.975 2099482 20152 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-02 05:19:23] CVMFS is ok
[2026-05-02 05:19:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 05:19:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 05:19:23] Further information can be found at the LHC@home message board.
[2026-05-02 05:19:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 05:19:23] Checking for apptainer binary...
[2026-05-02 05:19:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 05:19:23] Running /usr/bin/apptainer --version
[2026-05-02 05:19:23] apptainer version 1.3.2-1.el7
[2026-05-02 05:19:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 05:19:24] c-115-13.aglt2.org
[2026-05-02 05:19:24] apptainer works
[2026-05-02 05:19:24] Set ATHENA_PROC_NUMBER=8
[2026-05-02 05:19:24] Set ATHENA_CORE_NUMBER=8
[2026-05-02 05:19:24] Starting ATLAS job with PandaID=7123319255
[2026-05-02 05:19:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:10:16 (20046): wrapper (7.7.26015): starting
07:10:16 (20046): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 07:10:16] Arguments: --nthreads 8
[2026-05-02 07:10:16] Threads: 8
[2026-05-02 07:10:16] This job has been restarted, cleaning up previous attempt
[2026-05-02 07:10:16] Checking for CVMFS
[2026-05-02 07:10:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 07:10:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 07:10:17] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 07:10:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 07:10:17] 2.11.2.0 2754 61772 79292 159128 3 32 17069763 20275200 1 130560 0 12899684 99.975 2103786 20172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-02 07:10:17] CVMFS is ok
[2026-05-02 07:10:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 07:10:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 07:10:17] Further information can be found at the LHC@home message board.
[2026-05-02 07:10:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 07:10:17] Checking for apptainer binary...
[2026-05-02 07:10:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 07:10:17] Running /usr/bin/apptainer --version
[2026-05-02 07:10:17] apptainer version 1.3.2-1.el7
[2026-05-02 07:10:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 07:10:19] c-115-13.aglt2.org
[2026-05-02 07:10:19] apptainer works
[2026-05-02 07:10:19] Set ATHENA_PROC_NUMBER=8
[2026-05-02 07:10:19] Set ATHENA_CORE_NUMBER=8
[2026-05-02 07:10:19] Starting ATLAS job with PandaID=7123319255
[2026-05-02 07:10:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 09:44:14]  *** The last 200 lines of the pilot log: ***
[2026-05-02 09:44:14] 2026-05-02 13:43:36,931 | INFO     | maximum number of monitored processes: 6
[2026-05-02 09:44:14] 2026-05-02 13:43:39,434 | INFO     | monitor loop #695: job 0:7123319255 is in state 'finished'
[2026-05-02 09:44:14] 2026-05-02 13:43:39,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 09:44:14] 2026-05-02 13:43:39,593 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 09:44:14] 2026-05-02 13:43:41,664 | INFO     | job 7123319255 has state=finished
[2026-05-02 09:44:14] 2026-05-02 13:43:41,664 | INFO     | preparing for final server update for job 7123319255 in state='finished'
[2026-05-02 09:44:14] 2026-05-02 13:43:41,665 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7123319255/jobReport.json
[2026-05-02 09:44:14] 2026-05-02 13:43:41,668 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-05-02 09:44:14] 2026-05-02 13:43:41,668 | INFO     | this job has now completed (state=finished)
[2026-05-02 09:44:14] 2026-05-02 13:43:41,668 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 09:44:14] 2026-05-02 13:43:41,669 | INFO     | log transfer has been attempted: DONE
[2026-05-02 09:44:14] 2026-05-02 13:43:41,669 | INFO     | job 7123319255 has finished - writing final server update
[2026-05-02 09:44:14] 2026-05-02 13:43:41,669 | INFO     | total number of processed events: 400 (read)
[2026-05-02 09:44:14] 2026-05-02 13:43:41,672 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7123319255/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 09:44:14] 2026-05-02 13:43:41,672 | INFO     | extracted standard info from prmon json
[2026-05-02 09:44:14] 2026-05-02 13:43:41,672 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 09:44:14] 2026-05-02 13:43:41,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 09:44:14] 2026-05-02 13:43:41,673 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 09:44:14] 2026-05-02 13:43:41,675 | INFO     | fitting pss+swap vs Time
[2026-05-02 09:44:14] 2026-05-02 13:43:41,676 | INFO     | sum of square deviations: 1046484737.5
[2026-05-02 09:44:14] 2026-05-02 13:43:41,676 | INFO     | sum of deviations: 6354013058.499998
[2026-05-02 09:44:14] 2026-05-02 13:43:41,676 | INFO     | mean x (centered): 0.0
[2026-05-02 09:44:14] 2026-05-02 13:43:41,677 | INFO     | mean y: 2515360.6733333333
[2026-05-02 09:44:14] 2026-05-02 13:43:41,677 | INFO     | intersect: 2515360.6733333333
[2026-05-02 09:44:14] 2026-05-02 13:43:41,677 | INFO     | chi2: 1.6468503920304582
[2026-05-02 09:44:14] 2026-05-02 13:43:41,677 | INFO     | sum of square deviations: 945282840.0
[2026-05-02 09:44:14] 2026-05-02 13:43:41,678 | INFO     | sum of deviations: 6024974209.000002
[2026-05-02 09:44:14] 2026-05-02 13:43:41,678 | INFO     | mean x (centered): 0.0
[2026-05-02 09:44:14] 2026-05-02 13:43:41,678 | INFO     | mean y: 2514864.668965517
[2026-05-02 09:44:14] 2026-05-02 13:43:41,678 | INFO     | intersect: 2514864.668965517
[2026-05-02 09:44:14] 2026-05-02 13:43:41,678 | INFO     | chi2: 1.6478111886629225
[2026-05-02 09:44:14] 2026-05-02 13:43:41,679 | INFO     | current chi2=1.6478111886629225 (change=-0.05834146423462851 %)
[2026-05-02 09:44:14] 2026-05-02 13:43:41,679 | INFO     | right removable region: 144
[2026-05-02 09:44:14] 2026-05-02 13:43:41,679 | INFO     | sum of square deviations: 945282840.0
[2026-05-02 09:44:14] 2026-05-02 13:43:41,680 | INFO     | sum of deviations: -16464000528.0
[2026-05-02 09:44:14] 2026-05-02 13:43:41,680 | INFO     | mean x (centered): 0.0
[2026-05-02 09:44:14] 2026-05-02 13:43:41,680 | INFO     | mean y: 2549206.979310345
[2026-05-02 09:44:14] 2026-05-02 13:43:41,680 | INFO     | intersect: 2549206.979310345
[2026-05-02 09:44:14] 2026-05-02 13:43:41,680 | INFO     | chi2: 0.14211023706033862
[2026-05-02 09:44:14] 2026-05-02 13:43:41,680 | INFO     | current chi2=0.14211023706033862 (change=91.37078645710336 %)
[2026-05-02 09:44:14] 2026-05-02 13:43:41,681 | INFO     | sum of square deviations: 850825255.0
[2026-05-02 09:44:14] 2026-05-02 13:43:41,681 | INFO     | sum of deviations: -13951204592.000002
[2026-05-02 09:44:14] 2026-05-02 13:43:41,681 | INFO     | mean x (centered): 0.0
[2026-05-02 09:44:14] 2026-05-02 13:43:41,681 | INFO     | mean y: 2545079.4857142856
[2026-05-02 09:44:14] 2026-05-02 13:43:41,682 | INFO     | intersect: 2545079.4857142856
[2026-05-02 09:44:14] 2026-05-02 13:43:41,682 | INFO     | chi2: 0.12945532198962975
[2026-05-02 09:44:14] 2026-05-02 13:43:41,682 | INFO     | current chi2=0.12945532198962975 (change=8.904998916676016 %)
[2026-05-02 09:44:14] 2026-05-02 13:43:41,682 | INFO     | left removable region: 10
[2026-05-02 09:44:14] 2026-05-02 13:43:41,682 | INFO     | sum of square deviations: 746051197.5
[2026-05-02 09:44:14] 2026-05-02 13:43:41,683 | INFO     | sum of deviations: -13558295662.0
[2026-05-02 09:44:14] 2026-05-02 13:43:41,683 | INFO     | mean x (centered): 0.0
[2026-05-02 09:44:14] 2026-05-02 13:43:41,683 | INFO     | mean y: 2545766.1791044776
[2026-05-02 09:44:14] 2026-05-02 13:43:41,683 | INFO     | intersect: 2545766.1791044776
[2026-05-02 09:44:14] 2026-05-02 13:43:41,683 | INFO     | chi2: 0.1264131522731829
[2026-05-02 09:44:14] 2026-05-02 13:43:41,684 | INFO     | current memory leak: -18.17 B/s (using 134 data points, chi2=0.13)
[2026-05-02 09:44:14] 2026-05-02 13:43:41,684 | INFO     | could have reported an average CPU frequency of 1795 MHz (9 samples)
[2026-05-02 09:44:14] 2026-05-02 13:43:41,684 | INFO     | ..............................
[2026-05-02 09:44:14] 2026-05-02 13:43:41,684 | INFO     | . Timing measurements:
[2026-05-02 09:44:14] 2026-05-02 13:43:41,684 | INFO     | . get job = 0 s
[2026-05-02 09:44:14] 2026-05-02 13:43:41,684 | INFO     | . initial setup = 1 s
[2026-05-02 09:44:14] 2026-05-02 13:43:41,684 | INFO     | . payload setup = 16 s
[2026-05-02 09:44:14] 2026-05-02 13:43:41,685 | INFO     | . stage-in = 0 s
[2026-05-02 09:44:14] 2026-05-02 13:43:41,685 | INFO     | . payload execution = 9145 s
[2026-05-02 09:44:14] 2026-05-02 13:43:41,685 | INFO     | . stage-out = 1 s
[2026-05-02 09:44:14] 2026-05-02 13:43:41,685 | INFO     | . log creation = 0 s
[2026-05-02 09:44:14] 2026-05-02 13:43:41,685 | INFO     | ..............................
[2026-05-02 09:44:14] 2026-05-02 13:43:42,081 | INFO     | 
[2026-05-02 09:44:14] 2026-05-02 13:43:42,081 | INFO     | job summary report
[2026-05-02 09:44:14] 2026-05-02 13:43:42,081 | INFO     | --------------------------------------------------
[2026-05-02 09:44:14] 2026-05-02 13:43:42,081 | INFO     | PanDA job id: 7123319255
[2026-05-02 09:44:14] 2026-05-02 13:43:42,082 | INFO     | task id: 49645815
[2026-05-02 09:44:14] 2026-05-02 13:43:42,082 | INFO     | errors: (none)
[2026-05-02 09:44:14] 2026-05-02 13:43:42,082 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 09:44:14] 2026-05-02 13:43:42,082 | INFO     | pilot state: finished 
[2026-05-02 09:44:14] 2026-05-02 13:43:42,082 | INFO     | transexitcode: 0
[2026-05-02 09:44:14] 2026-05-02 13:43:42,082 | INFO     | exeerrorcode: 0
[2026-05-02 09:44:14] 2026-05-02 13:43:42,083 | INFO     | exeerrordiag: 
[2026-05-02 09:44:14] 2026-05-02 13:43:42,083 | INFO     | exitcode: 0
[2026-05-02 09:44:14] 2026-05-02 13:43:42,083 | INFO     | exitmsg: OK
[2026-05-02 09:44:14] 2026-05-02 13:43:42,083 | INFO     | cpuconsumptiontime: 68292 s
[2026-05-02 09:44:14] 2026-05-02 13:43:42,083 | INFO     | nevents: 400
[2026-05-02 09:44:14] 2026-05-02 13:43:42,083 | INFO     | neventsw: 0
[2026-05-02 09:44:14] 2026-05-02 13:43:42,083 | INFO     | pid: 26313
[2026-05-02 09:44:14] 2026-05-02 13:43:42,083 | INFO     | pgrp: 26313
[2026-05-02 09:44:14] 2026-05-02 13:43:42,084 | INFO     | corecount: 8
[2026-05-02 09:44:14] 2026-05-02 13:43:42,084 | INFO     | event service: False
[2026-05-02 09:44:14] 2026-05-02 13:43:42,084 | INFO     | sizes: {0: 2275633, 1: 2277207, 11: 2277235, 9166: 2305627, 9168: 2314625, 9171: 2314681, 9173: 2315067}
[2026-05-02 09:44:14] 2026-05-02 13:43:42,084 | INFO     | --------------------------------------------------
[2026-05-02 09:44:14] 2026-05-02 13:43:42,084 | INFO     | 
[2026-05-02 09:44:14] 2026-05-02 13:43:42,084 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-02 09:44:14] 2026-05-02 13:43:42,111 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,112 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,112 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,112 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,114 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 09:44:14] 2026-05-02 13:43:42,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,114 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 09:44:14] 2026-05-02 13:43:42,115 | INFO     | job 7123319255 has completed (purged errors)
[2026-05-02 09:44:14] 2026-05-02 13:43:42,115 | INFO     | overall cleanup function is called
[2026-05-02 09:44:14] 2026-05-02 13:43:43,121 | INFO     | --- collectZombieJob: --- 10, [26313]
[2026-05-02 09:44:14] 2026-05-02 13:43:43,121 | INFO     | zombie collector waiting for pid 26313
[2026-05-02 09:44:14] 2026-05-02 13:43:43,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 09:44:14] 2026-05-02 13:43:43,121 | INFO     | collected zombie processes
[2026-05-02 09:44:14] 2026-05-02 13:43:43,121 | INFO     | will attempt to kill all subprocesses of pid=26313
[2026-05-02 09:44:14] 2026-05-02 13:43:43,189 | INFO     | process IDs to be killed: [26313] (in reverse order)
[2026-05-02 09:44:14] 2026-05-02 13:43:43,251 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 09:44:14] 2026-05-02 13:43:43,251 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 09:44:14] 2026-05-02 13:43:43,255 | INFO     | did not find any defunct processes belonging to 26313
[2026-05-02 09:44:14] 2026-05-02 13:43:43,257 | INFO     | did not find any defunct processes belonging to 26313
[2026-05-02 09:44:14] 2026-05-02 13:43:43,258 | INFO     | Ready for new job
[2026-05-02 09:44:14] 2026-05-02 13:43:43,259 | INFO     | ***************************************
[2026-05-02 09:44:14] 2026-05-02 13:43:43,260 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 09:44:14] 2026-05-02 13:43:43,260 | INFO     | ***************************************
[2026-05-02 09:44:14] 2026-05-02 13:43:43,260 | INFO     | 
[2026-05-02 09:44:14] 2026-05-02 13:43:43,260 | INFO     | architecture information:
[2026-05-02 09:44:14] 2026-05-02 13:43:43,261 | INFO     | executing command: cat /etc/os-release
[2026-05-02 09:44:14] 2026-05-02 13:43:43,279 | INFO     | cat /etc/os-release:
[2026-05-02 09:44:14] NAME="CentOS Linux"
[2026-05-02 09:44:14] VERSION="7 (Core)"
[2026-05-02 09:44:14] ID="centos"
[2026-05-02 09:44:14] ID_LIKE="rhel fedora"
[2026-05-02 09:44:14] VERSION_ID="7"
[2026-05-02 09:44:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 09:44:14] ANSI_COLOR="0;31"
[2026-05-02 09:44:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 09:44:14] HOME_URL="https://www.centos.org/"
[2026-05-02 09:44:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 09:44:14] 
[2026-05-02 09:44:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 09:44:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 09:44:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 09:44:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 09:44:14] 
[2026-05-02 09:44:14] 2026-05-02 13:43:43,279 | INFO     | ***************************************
[2026-05-02 09:44:14] 2026-05-02 13:43:43,782 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-02 09:44:14] 2026-05-02 13:43:43,802 | INFO     | sufficient remaining disk space (18526240768 B)
[2026-05-02 09:44:14] 2026-05-02 13:43:43,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 09:44:14] 2026-05-02 13:43:43,802 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 09:44:14] 2026-05-02 13:43:43,803 | INFO     | update_server=False
[2026-05-02 09:44:14] 2026-05-02 13:43:43,803 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 09:44:14] 2026-05-02 13:43:43,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 09:44:14] 2026-05-02 13:43:43,803 | INFO     | aborting loop
[2026-05-02 09:44:14] 2026-05-02 13:43:44,014 | INFO     | all payload control threads have been joined
[2026-05-02 09:44:14] 2026-05-02 13:43:44,280 | INFO     | all data control threads have been joined
[2026-05-02 09:44:14] 2026-05-02 13:43:44,550 | INFO     | all job control threads have been joined
[2026-05-02 09:44:14] 2026-05-02 13:43:44,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 09:44:14] 2026-05-02 13:43:44,804 | INFO     | [job] job monitor thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:44,808 | INFO     | [job] retrieve thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:44,977 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:45,020 | INFO     | [payload] control thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:45,145 | INFO     | [payload] validate_post thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:45,286 | INFO     | [data] control thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:45,519 | INFO     | [payload] failed_post thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:45,555 | INFO     | [job] control thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:45,625 | INFO     | [data] copytool_in thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:45,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 09:44:14] 2026-05-02 13:43:45,964 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:46,112 | INFO     | [job] validate thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:46,304 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:46,768 | INFO     | [data] copytool_out thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:46,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 09:44:14] 2026-05-02 13:43:47,772 | INFO     | [job] queue monitor thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:49,684 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:51,976 | INFO     | [monitor] cgroup control has ended
[2026-05-02 09:44:14] 2026-05-02 13:43:54,236 | INFO     | job.realtimelogging is not enabled
[2026-05-02 09:44:14] 2026-05-02 13:43:55,241 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 09:44:14] 2026-05-02 13:43:56,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140188322346816)>', '<ExcThread(monitor, started 140187438925568)>']
[2026-05-02 09:44:14] 2026-05-02 13:44:01,191 | INFO     | all workflow threads have been joined
[2026-05-02 09:44:14] 2026-05-02 13:44:01,191 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 09:44:14] 2026-05-02 13:44:01,191 | INFO     | traces error code: 0
[2026-05-02 09:44:14] 2026-05-02 13:44:01,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 09:44:14] 2026-05-02 13:44:13,934 | INFO     | PID=23767 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 09:44:14] 2026-05-02 13:44:13,934 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 09:44:14] 2026-05-02 13:44:13,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 09:44:14] 2026-05-02 13:44:13,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 09:44:14] 2026-05-02 13:44:13,935 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 09:44:14] 2026-05-02 13:44:13,935 | INFO     | [monitor] control thread has ended
[2026-05-02 09:44:14] 2026-05-02 13:44:14,032 [wrapper] ==== pilot stdout END ====
[2026-05-02 09:44:14] 2026-05-02 13:44:14,036 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 09:44:14] 2026-05-02 13:44:14,041 [wrapper] pilotpid: 23767
[2026-05-02 09:44:14] 2026-05-02 13:44:14,046 [wrapper] Pilot exit status: 0
[2026-05-02 09:44:14] 2026-05-02 13:44:14,065 [wrapper] pandaids: 7123319255 7123319255
[2026-05-02 09:44:14] 2026-05-02 13:44:14,110 [wrapper] cleanup supervisor_pilot 22553 23768
[2026-05-02 09:44:14] 2026-05-02 13:44:14,115 [wrapper] Test setup, not cleaning
[2026-05-02 09:44:14] 2026-05-02 13:44:14,120 [wrapper] apfmon messages muted
[2026-05-02 09:44:14] 2026-05-02 13:44:14,125 [wrapper] ==== wrapper stdout END ====
[2026-05-02 09:44:14] 2026-05-02 13:44:14,129 [wrapper] ==== wrapper stderr END ====
[2026-05-02 09:44:14]  *** Error codes and diagnostics ***
[2026-05-02 09:44:14]     "exeErrorCode": 0,
[2026-05-02 09:44:14]     "pilotErrorCode": 0,
[2026-05-02 09:44:14]  *** Listing of results directory ***
[2026-05-02 09:44:14] total 646248
[2026-05-02 09:44:14] drwx------ 5 boincer umatlas      4096 Apr 22 05:13 pilot3
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas    683926 May  1 20:25 pilot3.tar.gz
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas      5631 May  1 20:26 queuedata.json
[2026-05-02 09:44:14] -rwx------ 1 boincer umatlas     36322 May  1 20:27 runpilot2-wrapper.sh
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas       100 May  2 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 09:44:14] -rwxr-xr-x 1 boincer umatlas      7986 May  2 05:19 run_atlas
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas       105 May  2 05:19 job.xml
[2026-05-02 09:44:14] -rw-r--r-- 3 boincer umatlas 226586438 May  2 05:19 EVNT.48629115._000658.pool.root.1
[2026-05-02 09:44:14] -rw-r--r-- 3 boincer umatlas 226586438 May  2 05:19 ATLAS.root_0
[2026-05-02 09:44:14] -rw-r--r-- 2 boincer umatlas     15667 May  2 05:19 start_atlas.sh
[2026-05-02 09:44:14] drwxrwx--x 2 boincer umatlas      4096 May  2 05:19 shared
[2026-05-02 09:44:14] -rw-r--r-- 2 boincer umatlas    697445 May  2 05:19 input.tar.gz
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas         0 May  2 05:19 boinc_lockfile
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas      2630 May  2 07:10 pandaJob.out
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas        57 May  2 07:10 setup.sh.local
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas   1002992 May  2 07:10 agis_schedconf.cvmfs.json
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas       433 May  2 07:10 workernode_map.json
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas      5828 May  2 09:38 init_data.xml
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas       489 May  2 09:43 boinc_task_state.xml
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas 202070013 May  2 09:43 HITS.49645815._028644.pool.root.1
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas      1049 May  2 09:43 memory_monitor_summary.json
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas   1508687 May  2 09:43 agis_ddmendpoints.agis.ALL.json
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas    343332 May  2 09:43 log.49645815._028644.job.log.tgz.1
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas      6421 May  2 09:43 heartbeat_new.json
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas      6312 May  2 09:43 heartbeat.json
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas        96 May  2 09:43 pilot_heartbeat.json
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas        29 May  2 09:43 wrapper_checkpoint.txt
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas      8192 May  2 09:43 boinc_mmap_file
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas       745 May  2 09:44 pilotlog.txt
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas    847888 May  2 09:44 log.49645815._028644.job.log.1
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas       357 May  2 09:44 output.list
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas       410 May  2 09:44 runtime_log
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas   1208320 May  2 09:44 result.tar.gz
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas      9049 May  2 09:44 runtime_log.err
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas       785 May  2 09:44 44d96bed4e07.diag
[2026-05-02 09:44:14] -rw-r--r-- 1 boincer umatlas     23324 May  2 09:44 stderr.txt
[2026-05-02 09:44:14] HITS file was successfully produced:
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas 202070013 May  2 09:43 shared/HITS.pool.root.1
[2026-05-02 09:44:14]  *** Contents of shared directory: ***
[2026-05-02 09:44:14] total 420496
[2026-05-02 09:44:14] -rw-r--r-- 3 boincer umatlas 226586438 May  2 05:19 ATLAS.root_0
[2026-05-02 09:44:14] -rw-r--r-- 2 boincer umatlas     15667 May  2 05:19 start_atlas.sh
[2026-05-02 09:44:14] -rw-r--r-- 2 boincer umatlas    697445 May  2 05:19 input.tar.gz
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas 202070013 May  2 09:43 HITS.pool.root.1
[2026-05-02 09:44:14] -rw------- 1 boincer umatlas   1208320 May  2 09:44 result.tar.gz
09:44:15 (20046): run_atlas exited; CPU time 68239.087407
09:44:15 (20046): called boinc_finish(0)

</stderr_txt>
]]>

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