Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:56:10 (25256): wrapper (7.7.26015): starting
15:56:10 (25256): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 15:56:10] Arguments: --nthreads 8
[2026-05-02 15:56:10] Threads: 8
[2026-05-02 15:56:10] Checking for CVMFS
[2026-05-02 15:56:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 15:56:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 15:56:10] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 15:56:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 15:56:10] 2.11.2.0 3305 24292 96884 159132 0 103 12852082 25165824 345 130560 0 7862096 99.957 1919436 2509 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 15:56:10] CVMFS is ok
[2026-05-02 15:56:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 15:56:10] Checking for apptainer binary...
[2026-05-02 15:56:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 15:56:10] Running /usr/bin/apptainer --version
[2026-05-02 15:56:10] apptainer version 1.3.2-1.el7
[2026-05-02 15:56:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 15:56:12] cg-vwn370.simple-grid.lan
[2026-05-02 15:56:12] apptainer works
[2026-05-02 15:56:12] Set ATHENA_PROC_NUMBER=8
[2026-05-02 15:56:12] Set ATHENA_CORE_NUMBER=8
[2026-05-02 15:56:12] Starting ATLAS job with PandaID=7126020908
[2026-05-02 15:56:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 20:36:17]  *** The last 200 lines of the pilot log: ***
[2026-05-02 20:36:17] 2026-05-02 18:35:27,230 | INFO     | log transfer has been attempted: DONE
[2026-05-02 20:36:17] 2026-05-02 18:35:27,230 | INFO     | job 7126020908 has finished - writing final server update
[2026-05-02 20:36:17] 2026-05-02 18:35:27,231 | INFO     | total number of processed events: 400 (read)
[2026-05-02 20:36:17] 2026-05-02 18:35:27,233 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7126020908/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 20:36:17] 2026-05-02 18:35:27,233 | INFO     | extracted standard info from prmon json
[2026-05-02 20:36:17] 2026-05-02 18:35:27,234 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 20:36:17] 2026-05-02 18:35:27,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 20:36:17] 2026-05-02 18:35:27,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 20:36:17] 2026-05-02 18:35:27,240 | INFO     | fitting pss+swap vs Time
[2026-05-02 20:36:17] 2026-05-02 18:35:27,240 | INFO     | sum of square deviations: 6378584712.5
[2026-05-02 20:36:17] 2026-05-02 18:35:27,243 | INFO     | sum of deviations: 23300408540.5
[2026-05-02 20:36:17] 2026-05-02 18:35:27,243 | INFO     | mean x (centered): 0.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,243 | INFO     | mean y: 2479980.5
[2026-05-02 20:36:17] 2026-05-02 18:35:27,244 | INFO     | intersect: 2479980.5
[2026-05-02 20:36:17] 2026-05-02 18:35:27,248 | INFO     | chi2: 2.276078572204912
[2026-05-02 20:36:17] 2026-05-02 18:35:27,249 | INFO     | sum of square deviations: 6035722470.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,252 | INFO     | sum of deviations: 40908954722.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,252 | INFO     | mean x (centered): 0.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,252 | INFO     | mean y: 2487693.2565055764
[2026-05-02 20:36:17] 2026-05-02 18:35:27,252 | INFO     | intersect: 2487693.2565055764
[2026-05-02 20:36:17] 2026-05-02 18:35:27,253 | INFO     | chi2: 1.50384428776197
[2026-05-02 20:36:17] 2026-05-02 18:35:27,253 | INFO     | current chi2=1.50384428776197 (change=33.92827883331169 %)
[2026-05-02 20:36:17] 2026-05-02 18:35:27,253 | INFO     | sum of square deviations: 5705372090.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,256 | INFO     | sum of deviations: 40097636513.499985
[2026-05-02 20:36:17] 2026-05-02 18:35:27,256 | INFO     | mean x (centered): 0.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,256 | INFO     | mean y: 2487318.632575758
[2026-05-02 20:36:17] 2026-05-02 18:35:27,256 | INFO     | intersect: 2487318.632575758
[2026-05-02 20:36:17] 2026-05-02 18:35:27,257 | INFO     | chi2: 1.5043671699213348
[2026-05-02 20:36:17] 2026-05-02 18:35:27,257 | INFO     | current chi2=1.5043671699213348 (change=-0.03476970080080284 %)
[2026-05-02 20:36:17] 2026-05-02 18:35:27,257 | INFO     | right removable region: 263
[2026-05-02 20:36:17] 2026-05-02 18:35:27,258 | INFO     | sum of square deviations: 6035722470.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,260 | INFO     | sum of deviations: -17674933732.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,261 | INFO     | mean x (centered): 0.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,261 | INFO     | mean y: 2498044.8066914496
[2026-05-02 20:36:17] 2026-05-02 18:35:27,261 | INFO     | intersect: 2498044.8066914496
[2026-05-02 20:36:17] 2026-05-02 18:35:27,261 | INFO     | chi2: 0.8327986066693496
[2026-05-02 20:36:17] 2026-05-02 18:35:27,262 | INFO     | current chi2=0.8327986066693496 (change=63.41081468630539 %)
[2026-05-02 20:36:17] 2026-05-02 18:35:27,262 | INFO     | sum of square deviations: 5705372090.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,265 | INFO     | sum of deviations: -13676899304.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,265 | INFO     | mean x (centered): 0.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,265 | INFO     | mean y: 2496172.909090909
[2026-05-02 20:36:17] 2026-05-02 18:35:27,269 | INFO     | intersect: 2496172.909090909
[2026-05-02 20:36:17] 2026-05-02 18:35:27,270 | INFO     | chi2: 0.8097471516737754
[2026-05-02 20:36:17] 2026-05-02 18:35:27,270 | INFO     | current chi2=0.8097471516737754 (change=2.76795071593178 %)
[2026-05-02 20:36:17] 2026-05-02 18:35:27,270 | INFO     | left removable region: 10
[2026-05-02 20:36:17] 2026-05-02 18:35:27,271 | INFO     | sum of square deviations: 5021496942.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,273 | INFO     | sum of deviations: 3806489303.9999986
[2026-05-02 20:36:17] 2026-05-02 18:35:27,273 | INFO     | mean x (centered): 0.0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,273 | INFO     | mean y: 2504423.774703557
[2026-05-02 20:36:17] 2026-05-02 18:35:27,273 | INFO     | intersect: 2504423.774703557
[2026-05-02 20:36:17] 2026-05-02 18:35:27,274 | INFO     | chi2: 0.021273529845787426
[2026-05-02 20:36:17] 2026-05-02 18:35:27,274 | INFO     | current memory leak: 0.76 B/s (using 253 data points, chi2=0.02)
[2026-05-02 20:36:17] 2026-05-02 18:35:27,275 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-05-02 20:36:17] 2026-05-02 18:35:27,275 | INFO     | ..............................
[2026-05-02 20:36:17] 2026-05-02 18:35:27,275 | INFO     | . Timing measurements:
[2026-05-02 20:36:17] 2026-05-02 18:35:27,275 | INFO     | . get job = 0 s
[2026-05-02 20:36:17] 2026-05-02 18:35:27,275 | INFO     | . initial setup = 7 s
[2026-05-02 20:36:17] 2026-05-02 18:35:27,276 | INFO     | . payload setup = 16 s
[2026-05-02 20:36:17] 2026-05-02 18:35:27,276 | INFO     | . stage-in = 0 s
[2026-05-02 20:36:17] 2026-05-02 18:35:27,276 | INFO     | . payload execution = 16690 s
[2026-05-02 20:36:17] 2026-05-02 18:35:27,276 | INFO     | . stage-out = 3 s
[2026-05-02 20:36:17] 2026-05-02 18:35:27,276 | INFO     | . log creation = 1 s
[2026-05-02 20:36:17] 2026-05-02 18:35:27,276 | INFO     | ..............................
[2026-05-02 20:36:17] 2026-05-02 18:35:27,457 | INFO     | 
[2026-05-02 20:36:17] 2026-05-02 18:35:27,458 | INFO     | job summary report
[2026-05-02 20:36:17] 2026-05-02 18:35:27,458 | INFO     | --------------------------------------------------
[2026-05-02 20:36:17] 2026-05-02 18:35:27,458 | INFO     | PanDA job id: 7126020908
[2026-05-02 20:36:17] 2026-05-02 18:35:27,458 | INFO     | task id: 49645815
[2026-05-02 20:36:17] 2026-05-02 18:35:27,458 | INFO     | errors: (none)
[2026-05-02 20:36:17] 2026-05-02 18:35:27,458 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 20:36:17] 2026-05-02 18:35:27,458 | INFO     | pilot state: finished 
[2026-05-02 20:36:17] 2026-05-02 18:35:27,458 | INFO     | transexitcode: 0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,458 | INFO     | exeerrorcode: 0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,459 | INFO     | exeerrordiag: 
[2026-05-02 20:36:17] 2026-05-02 18:35:27,459 | INFO     | exitcode: 0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,459 | INFO     | exitmsg: OK
[2026-05-02 20:36:17] 2026-05-02 18:35:27,459 | INFO     | cpuconsumptiontime: 69411 s
[2026-05-02 20:36:17] 2026-05-02 18:35:27,459 | INFO     | nevents: 400
[2026-05-02 20:36:17] 2026-05-02 18:35:27,459 | INFO     | neventsw: 0
[2026-05-02 20:36:17] 2026-05-02 18:35:27,459 | INFO     | pid: 1421
[2026-05-02 20:36:17] 2026-05-02 18:35:27,459 | INFO     | pgrp: 1421
[2026-05-02 20:36:17] 2026-05-02 18:35:27,459 | INFO     | corecount: 8
[2026-05-02 20:36:17] 2026-05-02 18:35:27,460 | INFO     | event service: False
[2026-05-02 20:36:17] 2026-05-02 18:35:27,460 | INFO     | sizes: {0: 2274746, 1: 2277232, 12: 2277232, 16710: 2309173, 16715: 2318171, 16717: 2318227, 16719: 2318549}
[2026-05-02 20:36:17] 2026-05-02 18:35:27,460 | INFO     | --------------------------------------------------
[2026-05-02 20:36:17] 2026-05-02 18:35:27,460 | INFO     | 
[2026-05-02 20:36:17] 2026-05-02 18:35:27,460 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-02 20:36:17] 2026-05-02 18:35:28,003 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,003 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,003 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,003 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,005 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,005 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 20:36:17] 2026-05-02 18:35:28,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,005 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 20:36:17] 2026-05-02 18:35:28,005 | INFO     | job 7126020908 has completed (purged errors)
[2026-05-02 20:36:17] 2026-05-02 18:35:28,006 | INFO     | overall cleanup function is called
[2026-05-02 20:36:17] 2026-05-02 18:35:29,014 | INFO     | --- collectZombieJob: --- 10, [1421]
[2026-05-02 20:36:17] 2026-05-02 18:35:29,014 | INFO     | zombie collector waiting for pid 1421
[2026-05-02 20:36:17] 2026-05-02 18:35:29,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 20:36:17] 2026-05-02 18:35:29,015 | INFO     | collected zombie processes
[2026-05-02 20:36:17] 2026-05-02 18:35:29,015 | INFO     | will attempt to kill all subprocesses of pid=1421
[2026-05-02 20:36:17] 2026-05-02 18:35:29,081 | INFO     | process IDs to be killed: [1421] (in reverse order)
[2026-05-02 20:36:17] 2026-05-02 18:35:30,082 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 20:36:17] 2026-05-02 18:35:30,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 20:36:17] 2026-05-02 18:35:30,084 | INFO     | did not find any defunct processes belonging to 1421
[2026-05-02 20:36:17] 2026-05-02 18:35:30,086 | INFO     | did not find any defunct processes belonging to 1421
[2026-05-02 20:36:17] 2026-05-02 18:35:30,086 | INFO     | Ready for new job
[2026-05-02 20:36:17] 2026-05-02 18:35:30,088 | INFO     | ***************************************
[2026-05-02 20:36:17] 2026-05-02 18:35:30,088 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 20:36:17] 2026-05-02 18:35:30,088 | INFO     | ***************************************
[2026-05-02 20:36:17] 2026-05-02 18:35:30,088 | INFO     | 
[2026-05-02 20:36:17] 2026-05-02 18:35:30,089 | INFO     | pilot is running in a VM
[2026-05-02 20:36:17] 2026-05-02 18:35:30,089 | INFO     | architecture information:
[2026-05-02 20:36:17] 2026-05-02 18:35:30,097 | INFO     | executing command: cat /etc/os-release
[2026-05-02 20:36:17] 2026-05-02 18:35:30,442 | INFO     | cat /etc/os-release:
[2026-05-02 20:36:17] NAME="CentOS Linux"
[2026-05-02 20:36:17] VERSION="7 (Core)"
[2026-05-02 20:36:17] ID="centos"
[2026-05-02 20:36:17] ID_LIKE="rhel fedora"
[2026-05-02 20:36:17] VERSION_ID="7"
[2026-05-02 20:36:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 20:36:17] ANSI_COLOR="0;31"
[2026-05-02 20:36:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 20:36:17] HOME_URL="https://www.centos.org/"
[2026-05-02 20:36:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 20:36:17] 
[2026-05-02 20:36:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 20:36:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 20:36:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 20:36:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 20:36:17] 
[2026-05-02 20:36:17] 2026-05-02 18:35:30,442 | INFO     | ***************************************
[2026-05-02 20:36:17] 2026-05-02 18:35:30,945 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-02 20:36:17] 2026-05-02 18:35:31,259 | INFO     | sufficient remaining disk space (497442357248 B)
[2026-05-02 20:36:17] 2026-05-02 18:35:31,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 20:36:17] 2026-05-02 18:35:31,259 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 20:36:17] 2026-05-02 18:35:31,260 | INFO     | update_server=False
[2026-05-02 20:36:17] 2026-05-02 18:35:31,260 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 20:36:17] 2026-05-02 18:35:31,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 20:36:17] 2026-05-02 18:35:31,280 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-02 20:36:17] 2026-05-02 18:35:31,281 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-02 20:36:17] 2026-05-02 18:35:31,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 20:36:17] 2026-05-02 18:35:31,281 | INFO     | will abort loop
[2026-05-02 20:36:17] 2026-05-02 18:35:31,530 | INFO     | all payload control threads have been joined
[2026-05-02 20:36:17] 2026-05-02 18:35:31,573 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 20:36:17] 2026-05-02 18:35:31,616 | INFO     | all data control threads have been joined
[2026-05-02 20:36:17] 2026-05-02 18:35:32,265 | INFO     | [job] retrieve thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:32,286 | INFO     | [job] job monitor thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:32,348 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:32,418 | INFO     | [job] validate thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:32,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 20:36:17] 2026-05-02 18:35:32,461 | INFO     | all job control threads have been joined
[2026-05-02 20:36:17] 2026-05-02 18:35:32,486 | INFO     | [payload] validate_post thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:32,536 | INFO     | [payload] control thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:32,622 | INFO     | [data] control thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:32,726 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:32,925 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:33,111 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:33,141 | INFO     | [data] copytool_in thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:33,428 | INFO     | [job] queue monitor thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:33,466 | INFO     | [job] control thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:33,580 | INFO     | [data] copytool_out thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:33,749 | INFO     | [payload] failed_post thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:35:35,269 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 20:36:17] 2026-05-02 18:36:00,081 | INFO     | PID=29334 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 20:36:17] 2026-05-02 18:36:00,081 | INFO     | .. there are 2 such processes running
[2026-05-02 20:36:17] 2026-05-02 18:36:00,081 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 20:36:17] 2026-05-02 18:36:00,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 20:36:17] 2026-05-02 18:36:00,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 20:36:17] 2026-05-02 18:36:05,226 | INFO     | [monitor] cgroup control has ended
[2026-05-02 20:36:17] 2026-05-02 18:36:06,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953352222528)>', '<ExcThread(monitor, started 139952801158912)>']
[2026-05-02 20:36:17] 2026-05-02 18:36:07,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 20:36:17] 2026-05-02 18:36:07,123 | INFO     | [monitor] control thread has ended
[2026-05-02 20:36:17] 2026-05-02 18:36:11,968 | INFO     | all workflow threads have been joined
[2026-05-02 20:36:17] 2026-05-02 18:36:11,968 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 20:36:17] 2026-05-02 18:36:11,969 | INFO     | traces error code: 0
[2026-05-02 20:36:17] 2026-05-02 18:36:11,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 20:36:17] 2026-05-02 18:36:12,386 [wrapper] ==== pilot stdout END ====
[2026-05-02 20:36:17] 2026-05-02 18:36:12,445 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 20:36:17] 2026-05-02 18:36:12,540 [wrapper] pilotpid: 29334
[2026-05-02 20:36:17] 2026-05-02 18:36:12,647 [wrapper] Pilot exit status: 0
[2026-05-02 20:36:17] 2026-05-02 18:36:13,179 [wrapper] pandaids: 7126020908
[2026-05-02 20:36:17] 2026-05-02 18:36:14,096 [wrapper] cleanup supervisor_pilot 20271 29335
[2026-05-02 20:36:17] 2026-05-02 18:36:14,228 [wrapper] Test setup, not cleaning
[2026-05-02 20:36:17] 2026-05-02 18:36:14,359 [wrapper] apfmon messages muted
[2026-05-02 20:36:17] 2026-05-02 18:36:14,454 [wrapper] ==== wrapper stdout END ====
[2026-05-02 20:36:17] 2026-05-02 18:36:14,598 [wrapper] ==== wrapper stderr END ====
[2026-05-02 20:36:17]  *** Error codes and diagnostics ***
[2026-05-02 20:36:17]     "exeErrorCode": 0,
[2026-05-02 20:36:17]     "pilotErrorCode": 0,
[2026-05-02 20:36:17]  *** Listing of results directory ***
[2026-05-02 20:36:17] total 419504
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc    683926 May  2 09:20 pilot3.tar.gz
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc      5631 May  2 09:23 queuedata.json
[2026-05-02 20:36:17] -rwx------. 1 boinc boinc     36322 May  2 09:24 runpilot2-wrapper.sh
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc       100 May  2 15:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 20:36:17] -rwxr-xr-x. 1 boinc boinc      7986 May  2 15:56 run_atlas
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc       105 May  2 15:56 job.xml
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc      6307 May  2 15:56 init_data.xml
[2026-05-02 20:36:17] -rw-r--r--. 2 boinc boinc 223087345 May  2 15:56 EVNT.48629115._000604.pool.root.1
[2026-05-02 20:36:17] -rw-r--r--. 2 boinc boinc     15667 May  2 15:56 start_atlas.sh
[2026-05-02 20:36:17] drwxrwx--x. 2 boinc boinc        68 May  2 15:56 shared
[2026-05-02 20:36:17] -rw-r--r--. 2 boinc boinc    697444 May  2 15:56 input.tar.gz
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc         0 May  2 15:56 boinc_lockfile
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc      2627 May  2 15:56 pandaJob.out
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc   1002984 May  2 15:56 agis_schedconf.cvmfs.json
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc       415 May  2 15:56 workernode_map.json
[2026-05-02 20:36:17] drwx------. 5 boinc boinc      4096 May  2 15:56 pilot3
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc 198407012 May  2 20:33 HITS.49645815._029827.pool.root.1
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc       488 May  2 20:34 boinc_task_state.xml
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc        95 May  2 20:35 pilot_heartbeat.json
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc      1027 May  2 20:35 memory_monitor_summary.json
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc   1508687 May  2 20:35 agis_ddmendpoints.agis.ALL.json
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc    425498 May  2 20:35 log.49645815._029827.job.log.tgz.1
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc      6339 May  2 20:35 heartbeat_new.json
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc      6230 May  2 20:35 heartbeat.json
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc        28 May  2 20:35 wrapper_checkpoint.txt
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc      8192 May  2 20:35 boinc_mmap_file
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc      5069 May  2 20:36 pilotlog.txt
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc   1550602 May  2 20:36 log.49645815._029827.job.log.1
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc       357 May  2 20:36 output.list
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc       410 May  2 20:36 runtime_log
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc   1996800 May  2 20:36 result.tar.gz
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc      8439 May  2 20:36 runtime_log.err
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc       655 May  2 20:36 a6bb83b76b3e.diag
[2026-05-02 20:36:17] -rw-r--r--. 1 boinc boinc     20581 May  2 20:36 stderr.txt
[2026-05-02 20:36:17] HITS file was successfully produced:
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc 198407012 May  2 20:33 shared/HITS.pool.root.1
[2026-05-02 20:36:17]  *** Contents of shared directory: ***
[2026-05-02 20:36:17] total 414272
[2026-05-02 20:36:17] -rw-r--r--. 2 boinc boinc 223087345 May  2 15:56 ATLAS.root_0
[2026-05-02 20:36:17] -rw-r--r--. 2 boinc boinc     15667 May  2 15:56 start_atlas.sh
[2026-05-02 20:36:17] -rw-r--r--. 2 boinc boinc    697444 May  2 15:56 input.tar.gz
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc 198407012 May  2 20:33 HITS.pool.root.1
[2026-05-02 20:36:17] -rw-------. 1 boinc boinc   1996800 May  2 20:36 result.tar.gz
20:36:19 (25256): run_atlas exited; CPU time 69538.944670
20:36:19 (25256): called boinc_finish(0)

</stderr_txt>
]]>

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