Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:40:01 (2470892): wrapper (7.7.26015): starting
05:40:01 (2470892): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 05:40:01] Arguments: --nthreads 8
[2026-05-02 05:40:01] Threads: 8
[2026-05-02 05:40:01] Checking for CVMFS
[2026-05-02 05:40:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 05:40:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 05:40:03] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 05:40:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 05:40:04] 2.13.3.0 19353 2615 154300 159126 1 835 31442658 40960000 55239 16776704 0 49628279 99.821 22576538 38582 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-02 05:40:04] CVMFS is ok
[2026-05-02 05:40:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 05:40:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 05:40:04] Further information can be found at the LHC@home message board.
[2026-05-02 05:40:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 05:40:04] Checking for apptainer binary...
[2026-05-02 05:40:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 05:40:04] Running /usr/bin/apptainer --version
[2026-05-02 05:40:05] apptainer version 1.4.5-3.el9
[2026-05-02 05:40:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 05:40:05] c8-6-10.aglt2.org
[2026-05-02 05:40:05] apptainer works
[2026-05-02 05:40:06] Set ATHENA_PROC_NUMBER=8
[2026-05-02 05:40:06] Set ATHENA_CORE_NUMBER=8
[2026-05-02 05:40:07] Starting ATLAS job with PandaID=7125989408
[2026-05-02 05:40:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 07:09:20]  *** The last 200 lines of the pilot log: ***
[2026-05-02 07:09:20]  ddmendpoint_alt=None
[2026-05-02 07:09:20]  direct_access_lan=False
[2026-05-02 07:09:20]  direct_access_wan=False
[2026-05-02 07:09:20]  domain=
[2026-05-02 07:09:20]  filesize=313658
[2026-05-02 07:09:20]  filetype=log
[2026-05-02 07:09:20]  guid=f308ae29-1ad8-4ef1-acd2-462bc9671706
[2026-05-02 07:09:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-02 07:09:20]  is_altstaged=None
[2026-05-02 07:09:20]  is_tar=False
[2026-05-02 07:09:20]  lfn=log.50017045._001546.job.log.tgz.1
[2026-05-02 07:09:20]  mtime=0
[2026-05-02 07:09:20]  protocol_id=None
[2026-05-02 07:09:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-02 07:09:20]  replicas=None
[2026-05-02 07:09:20]  scope=mc23_13p6TeV
[2026-05-02 07:09:20]  status=None
[2026-05-02 07:09:20]  status_code=0
[2026-05-02 07:09:20]  storage_token=
[2026-05-02 07:09:20]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-7125989408/log.50017045._001546.job.log.tgz.1
[2026-05-02 07:09:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/c1/log.50017045._001546.job.log.tgz.1
[2026-05-02 07:09:20]  workdir=None
[2026-05-02 07:09:20] ]
[2026-05-02 07:09:20] 2026-05-02 11:08:26,058 | INFO     | transferring file log.50017045._001546.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-7125989408/log.50017045._001546.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-05-02 07:09:20] 2026-05-02 11:08:26,058 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-7125989408/log.50017045._001546.job.log.tgz.1 /tmp/boinchome/slots/7/log.50017045._001546.job
[2026-05-02 07:09:20] 2026-05-02 11:08:26,103 | INFO     | adding to output.list: log.50017045._001546.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/c1/log.50017045._001546.job.log.tg
[2026-05-02 07:09:20] 2026-05-02 11:08:26,104 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-02 07:09:20] 2026-05-02 11:08:26,104 | INFO     | summary of transferred files:
[2026-05-02 07:09:20] 2026-05-02 11:08:26,104 | INFO     |  -- lfn=log.50017045._001546.job.log.tgz.1, status_code=0, status=transferred
[2026-05-02 07:09:20] 2026-05-02 11:08:26,104 | INFO     | stage-out finished correctly
[2026-05-02 07:09:20] 2026-05-02 11:08:27,464 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 07:09:20] 2026-05-02 11:08:27,597 | INFO     | job 7125989408 has state=finished
[2026-05-02 07:09:20] 2026-05-02 11:08:27,597 | INFO     | preparing for final server update for job 7125989408 in state='finished'
[2026-05-02 07:09:20] 2026-05-02 11:08:27,597 | INFO     | reading metadata from: /tmp/boinchome/slots/7/PanDA_Pilot-7125989408/jobReport.json
[2026-05-02 07:09:20] 2026-05-02 11:08:27,599 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/7/workernode_map.json
[2026-05-02 07:09:20] 2026-05-02 11:08:27,599 | INFO     | this job has now completed (state=finished)
[2026-05-02 07:09:20] 2026-05-02 11:08:27,599 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 07:09:20] 2026-05-02 11:08:27,615 | INFO     | log transfer has been attempted: DONE
[2026-05-02 07:09:20] 2026-05-02 11:08:27,615 | INFO     | job 7125989408 has finished - writing final server update
[2026-05-02 07:09:20] 2026-05-02 11:08:27,615 | INFO     | total number of processed events: 400 (read)
[2026-05-02 07:09:20] 2026-05-02 11:08:27,652 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-7125989408/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 07:09:20] 2026-05-02 11:08:27,653 | INFO     | extracted standard info from prmon json
[2026-05-02 07:09:20] 2026-05-02 11:08:27,653 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 07:09:20] 2026-05-02 11:08:27,653 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 07:09:20] 2026-05-02 11:08:27,653 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 07:09:20] 2026-05-02 11:08:27,654 | INFO     | fitting pss+swap vs Time
[2026-05-02 07:09:20] 2026-05-02 11:08:27,678 | INFO     | sum of square deviations: 141536226.9870133
[2026-05-02 07:09:20] 2026-05-02 11:08:27,678 | INFO     | sum of deviations: 5275613619.649349
[2026-05-02 07:09:20] 2026-05-02 11:08:27,678 | INFO     | mean x (centered): 0.0
[2026-05-02 07:09:20] 2026-05-02 11:08:27,678 | INFO     | mean y: 2507646.350649351
[2026-05-02 07:09:20] 2026-05-02 11:08:27,678 | INFO     | intersect: 2507646.350649351
[2026-05-02 07:09:20] 2026-05-02 11:08:27,678 | INFO     | chi2: 0.16568508477849495
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | current memory leak: 37.27 B/s (using 77 data points, chi2=0.17)
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | ..............................
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | . Timing measurements:
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | . get job = 0 s
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | . initial setup = 41 s
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | . payload setup = 67 s
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | . stage-in = 0 s
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | . payload execution = 5106 s
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | . stage-out = 1 s
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | . log creation = 0 s
[2026-05-02 07:09:20] 2026-05-02 11:08:27,679 | INFO     | ..............................
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | 
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | job summary report
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | --------------------------------------------------
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | PanDA job id: 7125989408
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | task id: 50017045
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | errors: (none)
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | pilot state: finished 
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | transexitcode: 0
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | exeerrorcode: 0
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | exeerrordiag: 
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | exitcode: 0
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | exitmsg: OK
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | cpuconsumptiontime: 21334 s
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | nevents: 400
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | neventsw: 0
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | pid: 2602017
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | pgrp: 2602017
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | corecount: 8
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | event service: False
[2026-05-02 07:09:20] 2026-05-02 11:08:27,921 | INFO     | sizes: {0: 2274567, 1: 2277053, 2: 2277053, 5177: 2303548, 5180: 2312546, 5181: 2312924}
[2026-05-02 07:09:20] 2026-05-02 11:08:27,922 | INFO     | --------------------------------------------------
[2026-05-02 07:09:20] 2026-05-02 11:08:27,922 | INFO     | 
[2026-05-02 07:09:20] 2026-05-02 11:08:27,922 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,065 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 07:09:20] 2026-05-02 11:08:28,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,065 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 07:09:20] 2026-05-02 11:08:28,065 | INFO     | job 7125989408 has completed (purged errors)
[2026-05-02 07:09:20] 2026-05-02 11:08:28,065 | INFO     | overall cleanup function is called
[2026-05-02 07:09:20] 2026-05-02 11:08:29,095 | INFO     | --- collectZombieJob: --- 10, [2602017]
[2026-05-02 07:09:20] 2026-05-02 11:08:29,095 | INFO     | zombie collector waiting for pid 2602017
[2026-05-02 07:09:20] 2026-05-02 11:08:29,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 07:09:20] 2026-05-02 11:08:29,095 | INFO     | collected zombie processes
[2026-05-02 07:09:20] 2026-05-02 11:08:29,095 | INFO     | will attempt to kill all subprocesses of pid=2602017
[2026-05-02 07:09:20] 2026-05-02 11:08:29,767 | INFO     | process IDs to be killed: [2602017] (in reverse order)
[2026-05-02 07:09:20] 2026-05-02 11:08:30,023 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 07:09:20] 2026-05-02 11:08:30,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 07:09:20] 2026-05-02 11:08:30,063 | INFO     | did not find any defunct processes belonging to 2602017
[2026-05-02 07:09:20] 2026-05-02 11:08:30,146 | INFO     | did not find any defunct processes belonging to 2602017
[2026-05-02 07:09:20] 2026-05-02 11:08:30,146 | INFO     | Ready for new job
[2026-05-02 07:09:20] 2026-05-02 11:08:30,147 | INFO     | ***************************************
[2026-05-02 07:09:20] 2026-05-02 11:08:30,147 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 07:09:20] 2026-05-02 11:08:30,147 | INFO     | ***************************************
[2026-05-02 07:09:20] 2026-05-02 11:08:30,147 | INFO     | 
[2026-05-02 07:09:20] 2026-05-02 11:08:30,156 | INFO     | architecture information:
[2026-05-02 07:09:20] 2026-05-02 11:08:30,160 | INFO     | executing command: cat /etc/os-release
[2026-05-02 07:09:20] 2026-05-02 11:08:30,238 | INFO     | cat /etc/os-release:
[2026-05-02 07:09:20] NAME="CentOS Linux"
[2026-05-02 07:09:20] VERSION="7 (Core)"
[2026-05-02 07:09:20] ID="centos"
[2026-05-02 07:09:20] ID_LIKE="rhel fedora"
[2026-05-02 07:09:20] VERSION_ID="7"
[2026-05-02 07:09:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 07:09:20] ANSI_COLOR="0;31"
[2026-05-02 07:09:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 07:09:20] HOME_URL="https://www.centos.org/"
[2026-05-02 07:09:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 07:09:20] 
[2026-05-02 07:09:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 07:09:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 07:09:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 07:09:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 07:09:20] 
[2026-05-02 07:09:20] 2026-05-02 11:08:30,238 | INFO     | ***************************************
[2026-05-02 07:09:20] 2026-05-02 11:08:30,742 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2026-05-02 07:09:20] 2026-05-02 11:08:30,836 | INFO     | sufficient remaining disk space (169961586688 B)
[2026-05-02 07:09:20] 2026-05-02 11:08:30,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 07:09:20] 2026-05-02 11:08:30,836 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 07:09:20] 2026-05-02 11:08:30,836 | INFO     | update_server=False
[2026-05-02 07:09:20] 2026-05-02 11:08:30,837 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 07:09:20] 2026-05-02 11:08:31,037 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-02 07:09:20] 2026-05-02 11:08:31,037 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-02 07:09:20] 2026-05-02 11:08:31,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 07:09:20] 2026-05-02 11:08:31,037 | INFO     | will abort loop
[2026-05-02 07:09:20] 2026-05-02 11:08:31,702 | INFO     | all data control threads have been joined
[2026-05-02 07:09:20] 2026-05-02 11:08:31,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 07:09:20] 2026-05-02 11:08:31,843 | INFO     | [job] retrieve thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:31,976 | INFO     | all payload control threads have been joined
[2026-05-02 07:09:20] 2026-05-02 11:08:32,050 | INFO     | [job] job monitor thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:32,261 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:32,284 | INFO     | all job control threads have been joined
[2026-05-02 07:09:20] 2026-05-02 11:08:32,385 | INFO     | [data] copytool_in thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:32,501 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:32,537 | INFO     | [job] validate thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:32,717 | INFO     | [data] control thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:32,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 07:09:20] 2026-05-02 11:08:32,957 | INFO     | [payload] validate_post thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:32,958 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:32,989 | INFO     | [payload] control thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:33,028 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:33,079 | INFO     | [payload] failed_post thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:33,290 | INFO     | [job] control thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:33,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 07:09:20] 2026-05-02 11:08:33,772 | INFO     | [data] copytool_out thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:33,952 | INFO     | [job] queue monitor thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:08:37,618 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 07:09:20] 2026-05-02 11:09:02,074 | INFO     | PID=2525760 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-02 07:09:20] 2026-05-02 11:09:02,074 | INFO     | .. there are 56 such processes running
[2026-05-02 07:09:20] 2026-05-02 11:09:02,074 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 07:09:20] 2026-05-02 11:09:02,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 07:09:20] 2026-05-02 11:09:02,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 07:09:20] 2026-05-02 11:09:13,326 | INFO     | [monitor] cgroup control has ended
[2026-05-02 07:09:20] 2026-05-02 11:09:13,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140221756770112)>', '<ExcThread(monitor, started 140221412796160)>']
[2026-05-02 07:09:20] 2026-05-02 11:09:14,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 07:09:20] 2026-05-02 11:09:14,146 | INFO     | [monitor] control thread has ended
[2026-05-02 07:09:20] 2026-05-02 11:09:18,947 | INFO     | all workflow threads have been joined
[2026-05-02 07:09:20] 2026-05-02 11:09:18,947 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 07:09:20] 2026-05-02 11:09:18,947 | INFO     | traces error code: 0
[2026-05-02 07:09:20] 2026-05-02 11:09:18,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 07:09:20] 2026-05-02 11:09:19,197 [wrapper] ==== pilot stdout END ====
[2026-05-02 07:09:20] 2026-05-02 11:09:19,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 07:09:20] 2026-05-02 11:09:19,238 [wrapper] pilotpid: 2525760
[2026-05-02 07:09:20] 2026-05-02 11:09:19,256 [wrapper] Pilot exit status: 0
[2026-05-02 07:09:20] 2026-05-02 11:09:19,399 [wrapper] pandaids: 7125989408
[2026-05-02 07:09:20] 2026-05-02 11:09:19,746 [wrapper] cleanup supervisor_pilot   77613 2525761
[2026-05-02 07:09:20] 2026-05-02 11:09:19,761 [wrapper] Test setup, not cleaning
[2026-05-02 07:09:20] 2026-05-02 11:09:19,814 [wrapper] apfmon messages muted
[2026-05-02 07:09:20] 2026-05-02 11:09:19,827 [wrapper] ==== wrapper stdout END ====
[2026-05-02 07:09:20] 2026-05-02 11:09:19,845 [wrapper] ==== wrapper stderr END ====
[2026-05-02 07:09:20]  *** Error codes and diagnostics ***
[2026-05-02 07:09:20]     "exeErrorCode": 0,
[2026-05-02 07:09:20]     "pilotErrorCode": 0,
[2026-05-02 07:09:20]  *** Listing of results directory ***
[2026-05-02 07:09:20] total 479828
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas    683926 May  2 02:46 pilot3.tar.gz
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas      5631 May  2 02:53 queuedata.json
[2026-05-02 07:09:20] -rwx------. 1 boincer umatlas     36322 May  2 02:53 runpilot2-wrapper.sh
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas       100 May  2 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 07:09:20] -rwxr-xr-x. 1 boincer umatlas      7986 May  2 05:40 run_atlas
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas       105 May  2 05:40 job.xml
[2026-05-02 07:09:20] -rw-r--r--. 2 boincer umatlas 313350372 May  2 05:40 EVNT.50017040._000031.pool.root.1
[2026-05-02 07:09:20] drwxrwx--x. 2 boincer umatlas      4096 May  2 05:40 shared
[2026-05-02 07:09:20] -rw-r--r--. 2 boincer umatlas    697397 May  2 05:40 input.tar.gz
[2026-05-02 07:09:20] -rw-r--r--. 2 boincer umatlas     15667 May  2 05:40 start_atlas.sh
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas         0 May  2 05:40 boinc_lockfile
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas      2519 May  2 05:40 pandaJob.out
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas        57 May  2 05:40 setup.sh.local
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas   1002992 May  2 05:41 agis_schedconf.cvmfs.json
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas   1508687 May  2 05:41 agis_ddmendpoints.agis.ALL.json
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas       430 May  2 05:42 workernode_map.json
[2026-05-02 07:09:20] drwx------. 5 boincer umatlas      4096 May  2 05:42 pilot3
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas      7099 May  2 07:03 init_data.xml
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas 172287513 May  2 07:07 HITS.50017045._001546.pool.root.1
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas       487 May  2 07:07 boinc_task_state.xml
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas        95 May  2 07:08 pilot_heartbeat.json
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas      1051 May  2 07:08 memory_monitor_summary.json
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas    313658 May  2 07:08 log.50017045._001546.job.log.tgz.1
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas      6373 May  2 07:08 heartbeat_new.json
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas      6264 May  2 07:08 heartbeat.json
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas      8192 May  2 07:09 boinc_mmap_file
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas        27 May  2 07:09 wrapper_checkpoint.txt
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas      5010 May  2 07:09 pilotlog.txt
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas    470527 May  2 07:09 log.50017045._001546.job.log.1
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas       357 May  2 07:09 output.list
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas       410 May  2 07:09 runtime_log
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas    798720 May  2 07:09 result.tar.gz
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas      8959 May  2 07:09 runtime_log.err
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas       655 May  2 07:09 9f71021a325d.diag
[2026-05-02 07:09:20] -rw-r--r--. 1 boincer umatlas     20810 May  2 07:09 stderr.txt
[2026-05-02 07:09:20] HITS file was successfully produced:
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas 172287513 May  2 07:07 shared/HITS.pool.root.1
[2026-05-02 07:09:20]  *** Contents of shared directory: ***
[2026-05-02 07:09:20] total 475748
[2026-05-02 07:09:20] -rw-r--r--. 2 boincer umatlas 313350372 May  2 05:40 ATLAS.root_0
[2026-05-02 07:09:20] -rw-r--r--. 2 boincer umatlas    697397 May  2 05:40 input.tar.gz
[2026-05-02 07:09:20] -rw-r--r--. 2 boincer umatlas     15667 May  2 05:40 start_atlas.sh
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas 172287513 May  2 07:07 HITS.pool.root.1
[2026-05-02 07:09:20] -rw-------. 1 boincer umatlas    798720 May  2 07:09 result.tar.gz
07:09:21 (2470892): run_atlas exited; CPU time 21534.387782
07:09:21 (2470892): called boinc_finish(0)

</stderr_txt>
]]>

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