Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:40:08 (3988249): wrapper (7.7.26015): starting
06:40:08 (3988249): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 06:40:08] Arguments: --nthreads 8
[2026-05-02 06:40:08] Threads: 8
[2026-05-02 06:40:08] Checking for CVMFS
[2026-05-02 06:40:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 06:40:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 06:40:09] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 06:40:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 06:40:10] 2.13.3.0 12599 2685 147988 159128 0 689 29446423 32935936 37087 16776704 0 19681940 99.592 19300398 30223 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-02 06:40:10] CVMFS is ok
[2026-05-02 06:40:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 06:40:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 06:40:10] Further information can be found at the LHC@home message board.
[2026-05-02 06:40:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 06:40:10] Checking for apptainer binary...
[2026-05-02 06:40:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 06:40:10] Running /usr/bin/apptainer --version
[2026-05-02 06:40:10] apptainer version 1.4.5-3.el9
[2026-05-02 06:40:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 06:40:10] c7-2-16.aglt2.org
[2026-05-02 06:40:10] apptainer works
[2026-05-02 06:40:10] Set ATHENA_PROC_NUMBER=8
[2026-05-02 06:40:10] Set ATHENA_CORE_NUMBER=8
[2026-05-02 06:40:10] Starting ATLAS job with PandaID=7125850973
[2026-05-02 06:40:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 08:15:55]  *** The last 200 lines of the pilot log: ***
[2026-05-02 08:15:55]  filesize=307961
[2026-05-02 08:15:55]  filetype=log
[2026-05-02 08:15:55]  guid=ed6e56d0-31f3-4280-97b1-5a7d3f12d953
[2026-05-02 08:15:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-02 08:15:55]  is_altstaged=None
[2026-05-02 08:15:55]  is_tar=False
[2026-05-02 08:15:55]  lfn=log.49263200._090722.job.log.tgz.1
[2026-05-02 08:15:55]  mtime=0
[2026-05-02 08:15:55]  protocol_id=None
[2026-05-02 08:15:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-02 08:15:55]  replicas=None
[2026-05-02 08:15:55]  scope=mc23_13p6TeV
[2026-05-02 08:15:55]  status=None
[2026-05-02 08:15:55]  status_code=0
[2026-05-02 08:15:55]  storage_token=
[2026-05-02 08:15:55]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-7125850973/log.49263200._090722.job.log.tgz.1
[2026-05-02 08:15:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/47/log.49263200._090722.job.log.tgz.1
[2026-05-02 08:15:55]  workdir=None
[2026-05-02 08:15:55] ]
[2026-05-02 08:15:55] 2026-05-02 12:15:17,109 | INFO     | transferring file log.49263200._090722.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-7125850973/log.49263200._090722.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-05-02 08:15:55] 2026-05-02 12:15:17,117 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-7125850973/log.49263200._090722.job.log.tgz.1 /tmp/boinchome/slots/5/log.49263200._090722.job
[2026-05-02 08:15:55] 2026-05-02 12:15:17,147 | INFO     | adding to output.list: log.49263200._090722.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/47/log.49263200._090722.job.log.tg
[2026-05-02 08:15:55] 2026-05-02 12:15:17,148 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-02 08:15:55] 2026-05-02 12:15:17,148 | INFO     | summary of transferred files:
[2026-05-02 08:15:55] 2026-05-02 12:15:17,148 | INFO     |  -- lfn=log.49263200._090722.job.log.tgz.1, status_code=0, status=transferred
[2026-05-02 08:15:55] 2026-05-02 12:15:17,148 | INFO     | stage-out finished correctly
[2026-05-02 08:15:55] 2026-05-02 12:15:17,687 | WARNING  | process 4000740 can no longer be monitored (due to stat problems) - aborting
[2026-05-02 08:15:55] 2026-05-02 12:15:17,688 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7125850973/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 08:15:55] 2026-05-02 12:15:18,273 | INFO     | number of running child processes to parent process 4000740: 1
[2026-05-02 08:15:55] 2026-05-02 12:15:18,274 | INFO     | maximum number of monitored processes: 6
[2026-05-02 08:15:55] 2026-05-02 12:15:20,214 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-02 08:15:55] 2026-05-02 12:15:20,439 | INFO     | job 7125850973 has state=finished
[2026-05-02 08:15:55] 2026-05-02 12:15:20,440 | INFO     | preparing for final server update for job 7125850973 in state='finished'
[2026-05-02 08:15:55] 2026-05-02 12:15:20,440 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7125850973/jobReport.json
[2026-05-02 08:15:55] 2026-05-02 12:15:20,442 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-05-02 08:15:55] 2026-05-02 12:15:20,443 | INFO     | this job has now completed (state=finished)
[2026-05-02 08:15:55] 2026-05-02 12:15:20,443 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 08:15:55] 2026-05-02 12:15:20,443 | INFO     | log transfer has been attempted: DONE
[2026-05-02 08:15:55] 2026-05-02 12:15:20,443 | INFO     | job 7125850973 has finished - writing final server update
[2026-05-02 08:15:55] 2026-05-02 12:15:20,443 | INFO     | total number of processed events: 400 (read)
[2026-05-02 08:15:55] 2026-05-02 12:15:20,466 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7125850973/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 08:15:55] 2026-05-02 12:15:20,467 | INFO     | extracted standard info from prmon json
[2026-05-02 08:15:55] 2026-05-02 12:15:20,467 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 08:15:55] 2026-05-02 12:15:20,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 08:15:55] 2026-05-02 12:15:20,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 08:15:55] 2026-05-02 12:15:20,471 | INFO     | fitting pss+swap vs Time
[2026-05-02 08:15:55] 2026-05-02 12:15:20,472 | INFO     | sum of square deviations: 183761585.0
[2026-05-02 08:15:55] 2026-05-02 12:15:20,472 | INFO     | sum of deviations: -15694434135.5
[2026-05-02 08:15:55] 2026-05-02 12:15:20,472 | INFO     | mean x (centered): 0.0
[2026-05-02 08:15:55] 2026-05-02 12:15:20,472 | INFO     | mean y: 2662915.154761905
[2026-05-02 08:15:55] 2026-05-02 12:15:20,472 | INFO     | intersect: 2662915.154761905
[2026-05-02 08:15:55] 2026-05-02 12:15:20,472 | INFO     | chi2: 0.1340366019780342
[2026-05-02 08:15:55] 2026-05-02 12:15:20,473 | INFO     | current memory leak: -85.41 B/s (using 84 data points, chi2=0.13)
[2026-05-02 08:15:55] 2026-05-02 12:15:20,473 | INFO     | could have reported an average CPU frequency of 3082 MHz (7 samples)
[2026-05-02 08:15:55] 2026-05-02 12:15:20,473 | INFO     | ..............................
[2026-05-02 08:15:55] 2026-05-02 12:15:20,473 | INFO     | . Timing measurements:
[2026-05-02 08:15:55] 2026-05-02 12:15:20,473 | INFO     | . get job = 0 s
[2026-05-02 08:15:55] 2026-05-02 12:15:20,473 | INFO     | . initial setup = 25 s
[2026-05-02 08:15:55] 2026-05-02 12:15:20,473 | INFO     | . payload setup = 68 s
[2026-05-02 08:15:55] 2026-05-02 12:15:20,473 | INFO     | . stage-in = 0 s
[2026-05-02 08:15:55] 2026-05-02 12:15:20,473 | INFO     | . payload execution = 5544 s
[2026-05-02 08:15:55] 2026-05-02 12:15:20,474 | INFO     | . stage-out = 1 s
[2026-05-02 08:15:55] 2026-05-02 12:15:20,474 | INFO     | . log creation = 0 s
[2026-05-02 08:15:55] 2026-05-02 12:15:20,474 | INFO     | ..............................
[2026-05-02 08:15:55] 2026-05-02 12:15:20,969 | INFO     | 
[2026-05-02 08:15:55] 2026-05-02 12:15:20,969 | INFO     | job summary report
[2026-05-02 08:15:55] 2026-05-02 12:15:20,969 | INFO     | --------------------------------------------------
[2026-05-02 08:15:55] 2026-05-02 12:15:20,969 | INFO     | PanDA job id: 7125850973
[2026-05-02 08:15:55] 2026-05-02 12:15:20,969 | INFO     | task id: 49263200
[2026-05-02 08:15:55] 2026-05-02 12:15:20,969 | INFO     | errors: (none)
[2026-05-02 08:15:55] 2026-05-02 12:15:20,969 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 08:15:55] 2026-05-02 12:15:20,969 | INFO     | pilot state: finished 
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | transexitcode: 0
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | exeerrorcode: 0
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | exeerrordiag: 
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | exitcode: 0
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | exitmsg: OK
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | cpuconsumptiontime: 30158 s
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | nevents: 400
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | neventsw: 0
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | pid: 4000740
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | pgrp: 4000740
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | corecount: 8
[2026-05-02 08:15:55] 2026-05-02 12:15:20,970 | INFO     | event service: False
[2026-05-02 08:15:55] 2026-05-02 12:15:20,971 | INFO     | sizes: {0: 2275300, 1: 2275384, 2: 2266391, 3: 2277213, 14: 2277241, 5616: 2304231, 5619: 2313229, 5622: 2313479}
[2026-05-02 08:15:55] 2026-05-02 12:15:20,971 | INFO     | --------------------------------------------------
[2026-05-02 08:15:55] 2026-05-02 12:15:20,971 | INFO     | 
[2026-05-02 08:15:55] 2026-05-02 12:15:20,971 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-05-02 08:15:55] 2026-05-02 12:15:20,996 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,996 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,996 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,997 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,999 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 08:15:55] 2026-05-02 12:15:20,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,999 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 08:15:55] 2026-05-02 12:15:20,999 | INFO     | job 7125850973 has completed (purged errors)
[2026-05-02 08:15:55] 2026-05-02 12:15:20,999 | INFO     | overall cleanup function is called
[2026-05-02 08:15:55] 2026-05-02 12:15:21,720 | INFO     | PID=3993993 has CPU usage=16.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-02 08:15:55] 2026-05-02 12:15:21,720 | INFO     | .. there are 36 such processes running
[2026-05-02 08:15:55] 2026-05-02 12:15:22,017 | INFO     | --- collectZombieJob: --- 10, [4000740]
[2026-05-02 08:15:55] 2026-05-02 12:15:22,018 | INFO     | zombie collector waiting for pid 4000740
[2026-05-02 08:15:55] 2026-05-02 12:15:22,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 08:15:55] 2026-05-02 12:15:22,018 | INFO     | collected zombie processes
[2026-05-02 08:15:55] 2026-05-02 12:15:22,019 | INFO     | will attempt to kill all subprocesses of pid=4000740
[2026-05-02 08:15:55] 2026-05-02 12:15:22,813 | INFO     | process IDs to be killed: [4000740] (in reverse order)
[2026-05-02 08:15:55] 2026-05-02 12:15:22,996 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 08:15:55] 2026-05-02 12:15:22,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 08:15:55] 2026-05-02 12:15:23,019 | INFO     | did not find any defunct processes belonging to 4000740
[2026-05-02 08:15:55] 2026-05-02 12:15:23,040 | INFO     | did not find any defunct processes belonging to 4000740
[2026-05-02 08:15:55] 2026-05-02 12:15:23,041 | INFO     | Ready for new job
[2026-05-02 08:15:55] 2026-05-02 12:15:23,042 | INFO     | ***************************************
[2026-05-02 08:15:55] 2026-05-02 12:15:23,042 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 08:15:55] 2026-05-02 12:15:23,043 | INFO     | ***************************************
[2026-05-02 08:15:55] 2026-05-02 12:15:23,043 | INFO     | 
[2026-05-02 08:15:55] 2026-05-02 12:15:23,047 | INFO     | architecture information:
[2026-05-02 08:15:55] 2026-05-02 12:15:23,048 | INFO     | executing command: cat /etc/os-release
[2026-05-02 08:15:55] 2026-05-02 12:15:23,070 | INFO     | cat /etc/os-release:
[2026-05-02 08:15:55] NAME="CentOS Linux"
[2026-05-02 08:15:55] VERSION="7 (Core)"
[2026-05-02 08:15:55] ID="centos"
[2026-05-02 08:15:55] ID_LIKE="rhel fedora"
[2026-05-02 08:15:55] VERSION_ID="7"
[2026-05-02 08:15:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 08:15:55] ANSI_COLOR="0;31"
[2026-05-02 08:15:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 08:15:55] HOME_URL="https://www.centos.org/"
[2026-05-02 08:15:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 08:15:55] 
[2026-05-02 08:15:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 08:15:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 08:15:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 08:15:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 08:15:55] 
[2026-05-02 08:15:55] 2026-05-02 12:15:23,071 | INFO     | ***************************************
[2026-05-02 08:15:55] 2026-05-02 12:15:23,575 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-05-02 08:15:55] 2026-05-02 12:15:23,615 | INFO     | sufficient remaining disk space (73950822400 B)
[2026-05-02 08:15:55] 2026-05-02 12:15:23,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 08:15:55] 2026-05-02 12:15:23,616 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 08:15:55] 2026-05-02 12:15:23,616 | INFO     | update_server=False
[2026-05-02 08:15:55] 2026-05-02 12:15:23,616 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 08:15:55] 2026-05-02 12:15:23,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 08:15:55] 2026-05-02 12:15:24,101 | INFO     | all data control threads have been joined
[2026-05-02 08:15:55] 2026-05-02 12:15:24,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 08:15:55] 2026-05-02 12:15:24,386 | INFO     | aborting loop
[2026-05-02 08:15:55] 2026-05-02 12:15:24,637 | INFO     | [job] retrieve thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:24,934 | INFO     | all job control threads have been joined
[2026-05-02 08:15:55] 2026-05-02 12:15:25,092 | INFO     | [payload] failed_post thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,114 | INFO     | [data] control thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,125 | INFO     | all payload control threads have been joined
[2026-05-02 08:15:55] 2026-05-02 12:15:25,126 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,330 | INFO     | [payload] validate_post thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,343 | INFO     | [data] copytool_in thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,390 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,392 | INFO     | [job] job monitor thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,510 | INFO     | [job] validate thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,633 | INFO     | [data] copytool_out thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,871 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 08:15:55] 2026-05-02 12:15:25,943 | INFO     | [job] control thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:25,978 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:26,130 | INFO     | [payload] control thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:26,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 08:15:55] 2026-05-02 12:15:26,890 | INFO     | [job] queue monitor thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:30,398 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 08:15:55] 2026-05-02 12:15:33,444 | INFO     | [monitor] cgroup control has ended
[2026-05-02 08:15:55] 2026-05-02 12:15:35,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229787924288)>', '<ExcThread(monitor, started 140229440681728)>']
[2026-05-02 08:15:55] 2026-05-02 12:15:40,384 | INFO     | all workflow threads have been joined
[2026-05-02 08:15:55] 2026-05-02 12:15:40,388 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 08:15:55] 2026-05-02 12:15:40,396 | INFO     | traces error code: 0
[2026-05-02 08:15:55] 2026-05-02 12:15:40,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 08:15:55] 2026-05-02 12:15:54,699 | INFO     | PID=3993993 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-02 08:15:55] 2026-05-02 12:15:54,700 | INFO     | .. there are 36 such processes running
[2026-05-02 08:15:55] 2026-05-02 12:15:54,700 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 08:15:55] 2026-05-02 12:15:54,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 08:15:55] 2026-05-02 12:15:54,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 08:15:55] 2026-05-02 12:15:54,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 08:15:55] 2026-05-02 12:15:54,703 | INFO     | [monitor] control thread has ended
[2026-05-02 08:15:55] 2026-05-02 12:15:55,303 [wrapper] ==== pilot stdout END ====
[2026-05-02 08:15:55] 2026-05-02 12:15:55,308 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 08:15:55] 2026-05-02 12:15:55,311 [wrapper] pilotpid: 3993993
[2026-05-02 08:15:55] 2026-05-02 12:15:55,313 [wrapper] Pilot exit status: 0
[2026-05-02 08:15:55] 2026-05-02 12:15:55,325 [wrapper] pandaids: 7125850973
[2026-05-02 08:15:55] 2026-05-02 12:15:55,446 [wrapper] cleanup supervisor_pilot  255656 3993994
[2026-05-02 08:15:55] 2026-05-02 12:15:55,452 [wrapper] Test setup, not cleaning
[2026-05-02 08:15:55] 2026-05-02 12:15:55,468 [wrapper] apfmon messages muted
[2026-05-02 08:15:55] 2026-05-02 12:15:55,485 [wrapper] ==== wrapper stdout END ====
[2026-05-02 08:15:55] 2026-05-02 12:15:55,490 [wrapper] ==== wrapper stderr END ====
[2026-05-02 08:15:55]  *** Error codes and diagnostics ***
[2026-05-02 08:15:55]     "exeErrorCode": 0,
[2026-05-02 08:15:55]     "pilotErrorCode": 0,
[2026-05-02 08:15:55]  *** Listing of results directory ***
[2026-05-02 08:15:55] total 409548
[2026-05-02 08:15:55] -rwx------. 1 boincer umatlas     36322 May  2 01:54 runpilot2-wrapper.sh
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas      5631 May  2 01:54 queuedata.json
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas    683926 May  2 01:54 pilot3.tar.gz
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas       100 May  2 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 08:15:55] -rwxr-xr-x. 1 boincer umatlas      7986 May  2 06:40 run_atlas
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas       105 May  2 06:40 job.xml
[2026-05-02 08:15:55] -rw-r--r--. 2 boincer umatlas 223210652 May  2 06:40 EVNT.49263198._001674.pool.root.1
[2026-05-02 08:15:55] -rw-r--r--. 2 boincer umatlas     15667 May  2 06:40 start_atlas.sh
[2026-05-02 08:15:55] drwxrwx--x. 2 boincer umatlas      4096 May  2 06:40 shared
[2026-05-02 08:15:55] -rw-r--r--. 2 boincer umatlas    697419 May  2 06:40 input.tar.gz
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas         0 May  2 06:40 boinc_lockfile
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas      2575 May  2 06:40 pandaJob.out
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas        57 May  2 06:40 setup.sh.local
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas   1002992 May  2 06:40 agis_schedconf.cvmfs.json
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas   1508687 May  2 06:41 agis_ddmendpoints.agis.ALL.json
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas       428 May  2 06:41 workernode_map.json
[2026-05-02 08:15:55] drwx------. 5 boincer umatlas      4096 May  2 06:41 pilot3
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas      6869 May  2 08:09 init_data.xml
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas 190363177 May  2 08:14 HITS.49263200._090722.pool.root.1
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas       487 May  2 08:14 boinc_task_state.xml
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas        95 May  2 08:14 pilot_heartbeat.json
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas      1055 May  2 08:15 memory_monitor_summary.json
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas    307961 May  2 08:15 log.49263200._090722.job.log.tgz.1
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas      6391 May  2 08:15 heartbeat_new.json
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas      6282 May  2 08:15 heartbeat.json
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas      8192 May  2 08:15 boinc_mmap_file
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas        27 May  2 08:15 wrapper_checkpoint.txt
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas       823 May  2 08:15 pilotlog.txt
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas    528144 May  2 08:15 log.49263200._090722.job.log.1
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas       357 May  2 08:15 output.list
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas       410 May  2 08:15 runtime_log
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas    849920 May  2 08:15 result.tar.gz
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas      8959 May  2 08:15 runtime_log.err
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas       656 May  2 08:15 91a5cddd5147.diag
[2026-05-02 08:15:55] -rw-r--r--. 1 boincer umatlas     21267 May  2 08:15 stderr.txt
[2026-05-02 08:15:55] HITS file was successfully produced:
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas 190363177 May  2 08:14 shared/HITS.pool.root.1
[2026-05-02 08:15:55]  *** Contents of shared directory: ***
[2026-05-02 08:15:55] total 405420
[2026-05-02 08:15:55] -rw-r--r--. 2 boincer umatlas 223210652 May  2 06:40 ATLAS.root_0
[2026-05-02 08:15:55] -rw-r--r--. 2 boincer umatlas     15667 May  2 06:40 start_atlas.sh
[2026-05-02 08:15:55] -rw-r--r--. 2 boincer umatlas    697419 May  2 06:40 input.tar.gz
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas 190363177 May  2 08:14 HITS.pool.root.1
[2026-05-02 08:15:55] -rw-------. 1 boincer umatlas    849920 May  2 08:15 result.tar.gz
08:15:57 (3988249): run_atlas exited; CPU time 30377.500540
08:15:57 (3988249): called boinc_finish(0)

</stderr_txt>
]]>

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