Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:30:11 (4615): wrapper (7.7.26015): starting
11:30:11 (4615): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 11:30:11] Arguments: --nthreads 8
[2026-05-02 11:30:11] Threads: 8
[2026-05-02 11:30:11] Checking for CVMFS
[2026-05-02 11:30:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 11:30:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 11:30:12] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 11:30:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 11:30:12] 2.11.2.0 6858 24032 98712 159126 0 118 24343883 25165824 418 130560 0 9933578 99.940 2958545 3929 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-02 11:30:12] CVMFS is ok
[2026-05-02 11:30:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 11:30:12] Checking for apptainer binary...
[2026-05-02 11:30:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 11:30:12] Running /usr/bin/apptainer --version
[2026-05-02 11:30:12] apptainer version 1.3.2-1.el7
[2026-05-02 11:30:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 11:30:14] cg-vwn498.simple-grid.lan
[2026-05-02 11:30:14] apptainer works
[2026-05-02 11:30:14] Set ATHENA_PROC_NUMBER=8
[2026-05-02 11:30:14] Set ATHENA_CORE_NUMBER=8
[2026-05-02 11:30:14] Starting ATLAS job with PandaID=7123319206
[2026-05-02 11:30:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 14:13:14]  *** The last 200 lines of the pilot log: ***
[2026-05-02 14:13:14] 2026-05-02 12:12:22,716 | INFO     | log transfer has been attempted: DONE
[2026-05-02 14:13:14] 2026-05-02 12:12:22,716 | INFO     | job 7123319206 has finished - writing final server update
[2026-05-02 14:13:14] 2026-05-02 12:12:22,716 | INFO     | total number of processed events: 400 (read)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,718 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7123319206/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,719 | INFO     | extracted standard info from prmon json
[2026-05-02 14:13:14] 2026-05-02 12:12:22,719 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 14:13:14] 2026-05-02 12:12:22,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 14:13:14] 2026-05-02 12:12:22,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 14:13:14] 2026-05-02 12:12:22,723 | INFO     | fitting pss+swap vs Time
[2026-05-02 14:13:14] 2026-05-02 12:12:22,723 | INFO     | sum of square deviations: 1154663510.0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,724 | INFO     | sum of deviations: 39990466558.99999
[2026-05-02 14:13:14] 2026-05-02 12:12:22,724 | INFO     | mean x (centered): 0.0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,724 | INFO     | mean y: 2466250.6193548385
[2026-05-02 14:13:14] 2026-05-02 12:12:22,724 | INFO     | intersect: 2466250.6193548385
[2026-05-02 14:13:14] 2026-05-02 12:12:22,725 | INFO     | chi2: 4.71342376515631
[2026-05-02 14:13:14] 2026-05-02 12:12:22,725 | INFO     | sum of square deviations: 1046484737.5
[2026-05-02 14:13:14] 2026-05-02 12:12:22,726 | INFO     | sum of deviations: 38799340573.50001
[2026-05-02 14:13:14] 2026-05-02 12:12:22,726 | INFO     | mean x (centered): 0.0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,726 | INFO     | mean y: 2464570.9266666668
[2026-05-02 14:13:14] 2026-05-02 12:12:22,726 | INFO     | intersect: 2464570.9266666668
[2026-05-02 14:13:14] 2026-05-02 12:12:22,726 | INFO     | chi2: 4.72709952817499
[2026-05-02 14:13:14] 2026-05-02 12:12:22,727 | INFO     | current chi2=4.72709952817499 (change=-0.2901449922618366 %)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,727 | INFO     | right removable region: 149
[2026-05-02 14:13:14] 2026-05-02 12:12:22,727 | INFO     | sum of square deviations: 1046484737.5
[2026-05-02 14:13:14] 2026-05-02 12:12:22,728 | INFO     | sum of deviations: -9808691480.999998
[2026-05-02 14:13:14] 2026-05-02 12:12:22,728 | INFO     | mean x (centered): 0.0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,728 | INFO     | mean y: 2536270.88
[2026-05-02 14:13:14] 2026-05-02 12:12:22,728 | INFO     | intersect: 2536270.88
[2026-05-02 14:13:14] 2026-05-02 12:12:22,728 | INFO     | chi2: 0.48278054877232673
[2026-05-02 14:13:14] 2026-05-02 12:12:22,729 | INFO     | current chi2=0.48278054877232673 (change=89.7573277340083 %)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,729 | INFO     | sum of square deviations: 945282840.0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,730 | INFO     | sum of deviations: -20602113770.000004
[2026-05-02 14:13:14] 2026-05-02 12:12:22,730 | INFO     | mean x (centered): 0.0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,730 | INFO     | mean y: 2552297.896551724
[2026-05-02 14:13:14] 2026-05-02 12:12:22,730 | INFO     | intersect: 2552297.896551724
[2026-05-02 14:13:14] 2026-05-02 12:12:22,730 | INFO     | chi2: 0.13042769556057301
[2026-05-02 14:13:14] 2026-05-02 12:12:22,731 | INFO     | current chi2=0.13042769556057301 (change=72.98406162132245 %)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,731 | INFO     | sum of square deviations: 850825255.0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,732 | INFO     | sum of deviations: -16833511810.0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,732 | INFO     | mean x (centered): 0.0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,732 | INFO     | mean y: 2546199.5142857144
[2026-05-02 14:13:14] 2026-05-02 12:12:22,732 | INFO     | intersect: 2546199.5142857144
[2026-05-02 14:13:14] 2026-05-02 12:12:22,732 | INFO     | chi2: 0.12554629083183555
[2026-05-02 14:13:14] 2026-05-02 12:12:22,733 | INFO     | current chi2=0.12554629083183555 (change=3.742613643335017 %)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,733 | INFO     | left removable region: 15
[2026-05-02 14:13:14] 2026-05-02 12:12:22,733 | INFO     | sum of square deviations: 746051197.5
[2026-05-02 14:13:14] 2026-05-02 12:12:22,734 | INFO     | sum of deviations: -16075578147.999998
[2026-05-02 14:13:14] 2026-05-02 12:12:22,734 | INFO     | mean x (centered): 0.0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,734 | INFO     | mean y: 2547524.223880597
[2026-05-02 14:13:14] 2026-05-02 12:12:22,734 | INFO     | intersect: 2547524.223880597
[2026-05-02 14:13:14] 2026-05-02 12:12:22,734 | INFO     | chi2: 0.12259159142129646
[2026-05-02 14:13:14] 2026-05-02 12:12:22,735 | INFO     | current memory leak: -21.55 B/s (using 134 data points, chi2=0.12)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,735 | INFO     | could have reported an average CPU frequency of 2249 MHz (9 samples)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,735 | INFO     | ..............................
[2026-05-02 14:13:14] 2026-05-02 12:12:22,735 | INFO     | . Timing measurements:
[2026-05-02 14:13:14] 2026-05-02 12:12:22,736 | INFO     | . get job = 0 s
[2026-05-02 14:13:14] 2026-05-02 12:12:22,736 | INFO     | . initial setup = 10 s
[2026-05-02 14:13:14] 2026-05-02 12:12:22,736 | INFO     | . payload setup = 108 s
[2026-05-02 14:13:14] 2026-05-02 12:12:22,736 | INFO     | . stage-in = 0 s
[2026-05-02 14:13:14] 2026-05-02 12:12:22,736 | INFO     | . payload execution = 9563 s
[2026-05-02 14:13:14] 2026-05-02 12:12:22,736 | INFO     | . stage-out = 0 s
[2026-05-02 14:13:14] 2026-05-02 12:12:22,736 | INFO     | . log creation = 0 s
[2026-05-02 14:13:14] 2026-05-02 12:12:22,736 | INFO     | ..............................
[2026-05-02 14:13:14] 2026-05-02 12:12:22,838 | INFO     | 
[2026-05-02 14:13:14] 2026-05-02 12:12:22,839 | INFO     | job summary report
[2026-05-02 14:13:14] 2026-05-02 12:12:22,839 | INFO     | --------------------------------------------------
[2026-05-02 14:13:14] 2026-05-02 12:12:22,839 | INFO     | PanDA job id: 7123319206
[2026-05-02 14:13:14] 2026-05-02 12:12:22,839 | INFO     | task id: 49645815
[2026-05-02 14:13:14] 2026-05-02 12:12:22,839 | INFO     | errors: (none)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,839 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 14:13:14] 2026-05-02 12:12:22,839 | INFO     | pilot state: finished 
[2026-05-02 14:13:14] 2026-05-02 12:12:22,839 | INFO     | transexitcode: 0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,840 | INFO     | exeerrorcode: 0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,840 | INFO     | exeerrordiag: 
[2026-05-02 14:13:14] 2026-05-02 12:12:22,840 | INFO     | exitcode: 0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,840 | INFO     | exitmsg: OK
[2026-05-02 14:13:14] 2026-05-02 12:12:22,840 | INFO     | cpuconsumptiontime: 63285 s
[2026-05-02 14:13:14] 2026-05-02 12:12:22,840 | INFO     | nevents: 400
[2026-05-02 14:13:14] 2026-05-02 12:12:22,840 | INFO     | neventsw: 0
[2026-05-02 14:13:14] 2026-05-02 12:12:22,840 | INFO     | pid: 15479
[2026-05-02 14:13:14] 2026-05-02 12:12:22,840 | INFO     | pgrp: 15479
[2026-05-02 14:13:14] 2026-05-02 12:12:22,840 | INFO     | corecount: 8
[2026-05-02 14:13:14] 2026-05-02 12:12:22,841 | INFO     | event service: False
[2026-05-02 14:13:14] 2026-05-02 12:12:22,841 | INFO     | sizes: {0: 2275776, 1: 2277204, 11: 2277232, 9675: 2305833, 9677: 2314887, 9678: 2315089}
[2026-05-02 14:13:14] 2026-05-02 12:12:22,841 | INFO     | --------------------------------------------------
[2026-05-02 14:13:14] 2026-05-02 12:12:22,841 | INFO     | 
[2026-05-02 14:13:14] 2026-05-02 12:12:22,841 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-05-02 14:13:14] 2026-05-02 12:12:22,870 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,871 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,871 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,871 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,872 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,872 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,872 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,872 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 14:13:14] 2026-05-02 12:12:22,873 | INFO     | job 7123319206 has completed (purged errors)
[2026-05-02 14:13:14] 2026-05-02 12:12:22,873 | INFO     | overall cleanup function is called
[2026-05-02 14:13:14] 2026-05-02 12:12:23,881 | INFO     | --- collectZombieJob: --- 10, [15479]
[2026-05-02 14:13:14] 2026-05-02 12:12:23,881 | INFO     | zombie collector waiting for pid 15479
[2026-05-02 14:13:14] 2026-05-02 12:12:23,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 14:13:14] 2026-05-02 12:12:23,881 | INFO     | collected zombie processes
[2026-05-02 14:13:14] 2026-05-02 12:12:23,881 | INFO     | will attempt to kill all subprocesses of pid=15479
[2026-05-02 14:13:14] 2026-05-02 12:12:23,943 | INFO     | process IDs to be killed: [15479] (in reverse order)
[2026-05-02 14:13:14] 2026-05-02 12:12:24,023 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 14:13:14] 2026-05-02 12:12:24,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 14:13:14] 2026-05-02 12:12:24,025 | INFO     | did not find any defunct processes belonging to 15479
[2026-05-02 14:13:14] 2026-05-02 12:12:24,027 | INFO     | did not find any defunct processes belonging to 15479
[2026-05-02 14:13:14] 2026-05-02 12:12:24,027 | INFO     | Ready for new job
[2026-05-02 14:13:14] 2026-05-02 12:12:24,029 | INFO     | ***************************************
[2026-05-02 14:13:14] 2026-05-02 12:12:24,029 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 14:13:14] 2026-05-02 12:12:24,029 | INFO     | ***************************************
[2026-05-02 14:13:14] 2026-05-02 12:12:24,029 | INFO     | 
[2026-05-02 14:13:14] 2026-05-02 12:12:24,030 | INFO     | pilot is running in a VM
[2026-05-02 14:13:14] 2026-05-02 12:12:24,030 | INFO     | architecture information:
[2026-05-02 14:13:14] 2026-05-02 12:12:24,030 | INFO     | executing command: cat /etc/os-release
[2026-05-02 14:13:14] 2026-05-02 12:12:24,057 | INFO     | cat /etc/os-release:
[2026-05-02 14:13:14] NAME="CentOS Linux"
[2026-05-02 14:13:14] VERSION="7 (Core)"
[2026-05-02 14:13:14] ID="centos"
[2026-05-02 14:13:14] ID_LIKE="rhel fedora"
[2026-05-02 14:13:14] VERSION_ID="7"
[2026-05-02 14:13:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 14:13:14] ANSI_COLOR="0;31"
[2026-05-02 14:13:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 14:13:14] HOME_URL="https://www.centos.org/"
[2026-05-02 14:13:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 14:13:14] 
[2026-05-02 14:13:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 14:13:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 14:13:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 14:13:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 14:13:14] 
[2026-05-02 14:13:14] 2026-05-02 12:12:24,058 | INFO     | ***************************************
[2026-05-02 14:13:14] 2026-05-02 12:12:24,561 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-05-02 14:13:14] 2026-05-02 12:12:24,584 | INFO     | sufficient remaining disk space (498317918208 B)
[2026-05-02 14:13:14] 2026-05-02 12:12:24,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 14:13:14] 2026-05-02 12:12:24,584 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 14:13:14] 2026-05-02 12:12:24,584 | INFO     | update_server=False
[2026-05-02 14:13:14] 2026-05-02 12:12:24,584 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 14:13:14] 2026-05-02 12:12:24,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 14:13:14] 2026-05-02 12:12:24,585 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 14:13:14] 2026-05-02 12:12:24,586 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-02 14:13:14] 2026-05-02 12:12:24,586 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 14:13:14] 2026-05-02 12:12:24,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 14:13:14] 2026-05-02 12:12:24,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 14:13:14] 2026-05-02 12:12:24,623 | INFO     | all job control threads have been joined
[2026-05-02 14:13:14] 2026-05-02 12:12:24,874 | INFO     | all data control threads have been joined
[2026-05-02 14:13:14] 2026-05-02 12:12:24,964 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-02 14:13:14] 2026-05-02 12:12:24,965 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-02 14:13:14] 2026-05-02 12:12:24,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 14:13:14] 2026-05-02 12:12:24,965 | INFO     | will abort loop
[2026-05-02 14:13:14] 2026-05-02 12:12:25,516 | INFO     | all payload control threads have been joined
[2026-05-02 14:13:14] 2026-05-02 12:12:25,590 | INFO     | [job] retrieve thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:25,591 | INFO     | [job] queue monitor thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:25,592 | INFO     | [payload] validate_post thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:25,628 | INFO     | [job] control thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:25,629 | INFO     | [job] validate thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:25,697 | INFO     | [payload] failed_post thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:25,880 | INFO     | [data] control thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:25,970 | INFO     | [job] job monitor thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:26,444 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:26,521 | INFO     | [payload] control thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:26,522 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:26,591 | INFO     | [data] copytool_out thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:26,624 | INFO     | [data] copytool_in thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:26,666 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:27,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 14:13:14] 2026-05-02 12:12:31,109 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:12:35,443 | INFO     | job.realtimelogging is not enabled
[2026-05-02 14:13:14] 2026-05-02 12:12:36,448 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 14:13:14] 2026-05-02 12:13:08,684 | INFO     | [monitor] cgroup control has ended
[2026-05-02 14:13:14] 2026-05-02 12:13:09,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506736133952)>', '<ExcThread(monitor, started 140506444269312)>']
[2026-05-02 14:13:14] 2026-05-02 12:13:09,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 14:13:14] 2026-05-02 12:13:09,808 | INFO     | [monitor] control thread has ended
[2026-05-02 14:13:14] 2026-05-02 12:13:14,340 | INFO     | all workflow threads have been joined
[2026-05-02 14:13:14] 2026-05-02 12:13:14,340 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 14:13:14] 2026-05-02 12:13:14,340 | INFO     | traces error code: 0
[2026-05-02 14:13:14] 2026-05-02 12:13:14,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 14:13:14] 2026-05-02 12:13:14,478 [wrapper] ==== pilot stdout END ====
[2026-05-02 14:13:14] 2026-05-02 12:13:14,486 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 14:13:14] 2026-05-02 12:13:14,491 [wrapper] pilotpid: 9350
[2026-05-02 14:13:14] 2026-05-02 12:13:14,495 [wrapper] Pilot exit status: 0
[2026-05-02 14:13:14] 2026-05-02 12:13:14,518 [wrapper] pandaids: 7123319206
[2026-05-02 14:13:14] 2026-05-02 12:13:14,558 [wrapper] cleanup supervisor_pilot 24260 9351
[2026-05-02 14:13:14] 2026-05-02 12:13:14,562 [wrapper] Test setup, not cleaning
[2026-05-02 14:13:14] 2026-05-02 12:13:14,565 [wrapper] apfmon messages muted
[2026-05-02 14:13:14] 2026-05-02 12:13:14,569 [wrapper] ==== wrapper stdout END ====
[2026-05-02 14:13:14] 2026-05-02 12:13:14,573 [wrapper] ==== wrapper stderr END ====
[2026-05-02 14:13:14]  *** Error codes and diagnostics ***
[2026-05-02 14:13:14]     "exeErrorCode": 0,
[2026-05-02 14:13:14]     "pilotErrorCode": 0,
[2026-05-02 14:13:14]  *** Listing of results directory ***
[2026-05-02 14:13:14] total 416852
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc    683926 May  2 02:25 pilot3.tar.gz
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc      5631 May  2 02:26 queuedata.json
[2026-05-02 14:13:14] -rwx------. 1 boinc boinc     36322 May  2 02:27 runpilot2-wrapper.sh
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc       100 May  2 11:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 14:13:14] -rwxr-xr-x. 1 boinc boinc      7986 May  2 11:30 run_atlas
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc       105 May  2 11:30 job.xml
[2026-05-02 14:13:14] -rw-r--r--. 2 boinc boinc 223755865 May  2 11:30 EVNT.48629115._000656.pool.root.1
[2026-05-02 14:13:14] -rw-r--r--. 2 boinc boinc     15667 May  2 11:30 start_atlas.sh
[2026-05-02 14:13:14] drwxrwx--x. 2 boinc boinc        68 May  2 11:30 shared
[2026-05-02 14:13:14] -rw-r--r--. 2 boinc boinc    697443 May  2 11:30 input.tar.gz
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc      6307 May  2 11:30 init_data.xml
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc         0 May  2 11:30 boinc_lockfile
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc      2628 May  2 11:30 pandaJob.out
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc   1002992 May  2 11:30 agis_schedconf.cvmfs.json
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc   1508687 May  2 11:30 agis_ddmendpoints.agis.ALL.json
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc       415 May  2 11:30 workernode_map.json
[2026-05-02 14:13:14] drwx------. 5 boinc boinc      4096 May  2 11:30 pilot3
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc 196451591 May  2 14:11 HITS.49645815._028595.pool.root.1
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc        95 May  2 14:12 pilot_heartbeat.json
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc       487 May  2 14:12 boinc_task_state.xml
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc      1009 May  2 14:12 memory_monitor_summary.json
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc    339329 May  2 14:12 log.49645815._028595.job.log.tgz.1
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc      6330 May  2 14:12 heartbeat_new.json
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc      6221 May  2 14:12 heartbeat.json
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc        27 May  2 14:12 wrapper_checkpoint.txt
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc      8192 May  2 14:12 boinc_mmap_file
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc      4872 May  2 14:13 pilotlog.txt
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc    926166 May  2 14:13 log.49645815._028595.job.log.1
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc       357 May  2 14:13 output.list
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc       410 May  2 14:13 runtime_log
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc   1280000 May  2 14:13 result.tar.gz
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc      8438 May  2 14:13 runtime_log.err
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc       652 May  2 14:13 44d9832a4c0b.diag
[2026-05-02 14:13:14] -rw-r--r--. 1 boinc boinc     20505 May  2 14:13 stderr.txt
[2026-05-02 14:13:14] HITS file was successfully produced:
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc 196451591 May  2 14:11 shared/HITS.pool.root.1
[2026-05-02 14:13:14]  *** Contents of shared directory: ***
[2026-05-02 14:13:14] total 412312
[2026-05-02 14:13:14] -rw-r--r--. 2 boinc boinc 223755865 May  2 11:30 ATLAS.root_0
[2026-05-02 14:13:14] -rw-r--r--. 2 boinc boinc     15667 May  2 11:30 start_atlas.sh
[2026-05-02 14:13:14] -rw-r--r--. 2 boinc boinc    697443 May  2 11:30 input.tar.gz
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc 196451591 May  2 14:11 HITS.pool.root.1
[2026-05-02 14:13:14] -rw-------. 1 boinc boinc   1280000 May  2 14:13 result.tar.gz
14:13:16 (4615): run_atlas exited; CPU time 63362.286067
14:13:16 (4615): called boinc_finish(0)

</stderr_txt>
]]>

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