Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:39:41 (14310): wrapper (7.7.26015): starting
04:39:41 (14310): wrapper: running run_atlas (--nthreads 8)
[2026-05-02 04:39:41] Arguments: --nthreads 8
[2026-05-02 04:39:41] Threads: 8
[2026-05-02 04:39:41] Checking for CVMFS
[2026-05-02 04:39:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-02 04:39:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-02 04:39:42] Running cvmfs_config stat atlas.cern.ch
[2026-05-02 04:39:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-02 04:39:42] 2.11.2.0 2977 50733 79048 159124 1 52 19917689 20275200 1 130560 0 10978470 99.932 2014363 25373 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-02 04:39:42] CVMFS is ok
[2026-05-02 04:39:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 04:39:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 04:39:42] Further information can be found at the LHC@home message board.
[2026-05-02 04:39:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 04:39:42] Checking for apptainer binary...
[2026-05-02 04:39:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-02 04:39:42] Running /usr/bin/apptainer --version
[2026-05-02 04:39:42] apptainer version 1.3.2-1.el7
[2026-05-02 04:39:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 04:39:43] c-115-7.aglt2.org
[2026-05-02 04:39:43] apptainer works
[2026-05-02 04:39:43] Set ATHENA_PROC_NUMBER=8
[2026-05-02 04:39:43] Set ATHENA_CORE_NUMBER=8
[2026-05-02 04:39:43] Starting ATLAS job with PandaID=7123453278
[2026-05-02 04:39:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 06:34:47]  *** The last 200 lines of the pilot log: ***
[2026-05-02 06:34:47] 2026-05-02 10:34:14,001 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7123453278/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,068 | INFO     | number of running child processes to parent process 22573: 1
[2026-05-02 06:34:47] 2026-05-02 10:34:14,068 | INFO     | maximum number of monitored processes: 6
[2026-05-02 06:34:47] 2026-05-02 10:34:14,320 | INFO     | job 7123453278 has state=finished
[2026-05-02 06:34:47] 2026-05-02 10:34:14,320 | INFO     | preparing for final server update for job 7123453278 in state='finished'
[2026-05-02 06:34:47] 2026-05-02 10:34:14,320 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7123453278/jobReport.json
[2026-05-02 06:34:47] 2026-05-02 10:34:14,323 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-05-02 06:34:47] 2026-05-02 10:34:14,324 | INFO     | this job has now completed (state=finished)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,324 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,324 | INFO     | log transfer has been attempted: DONE
[2026-05-02 06:34:47] 2026-05-02 10:34:14,324 | INFO     | job 7123453278 has finished - writing final server update
[2026-05-02 06:34:47] 2026-05-02 10:34:14,325 | INFO     | total number of processed events: 400 (read)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,327 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7123453278/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,328 | INFO     | extracted standard info from prmon json
[2026-05-02 06:34:47] 2026-05-02 10:34:14,328 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 06:34:47] 2026-05-02 10:34:14,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 06:34:47] 2026-05-02 10:34:14,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 06:34:47] 2026-05-02 10:34:14,331 | INFO     | fitting pss+swap vs Time
[2026-05-02 06:34:47] 2026-05-02 10:34:14,332 | INFO     | sum of square deviations: 435610028.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,332 | INFO     | sum of deviations: 1162945876.499996
[2026-05-02 06:34:47] 2026-05-02 10:34:14,332 | INFO     | mean x (centered): 0.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,332 | INFO     | mean y: 2545349.848214286
[2026-05-02 06:34:47] 2026-05-02 10:34:14,332 | INFO     | intersect: 2545349.848214286
[2026-05-02 06:34:47] 2026-05-02 10:34:14,333 | INFO     | chi2: 1.6913799968247842
[2026-05-02 06:34:47] 2026-05-02 10:34:14,333 | INFO     | sum of square deviations: 379832238.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,334 | INFO     | sum of deviations: 1577541495.9999995
[2026-05-02 06:34:47] 2026-05-02 10:34:14,334 | INFO     | mean x (centered): 0.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,334 | INFO     | mean y: 2546484.2429906544
[2026-05-02 06:34:47] 2026-05-02 10:34:14,334 | INFO     | intersect: 2546484.2429906544
[2026-05-02 06:34:47] 2026-05-02 10:34:14,334 | INFO     | chi2: 1.6941320615380533
[2026-05-02 06:34:47] 2026-05-02 10:34:14,334 | INFO     | current chi2=1.6941320615380533 (change=-0.16271120141159795 %)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,334 | INFO     | right removable region: 106
[2026-05-02 06:34:47] 2026-05-02 10:34:14,335 | INFO     | sum of square deviations: 379832238.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,335 | INFO     | sum of deviations: -16321240886.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,335 | INFO     | mean x (centered): 0.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,335 | INFO     | mean y: 2592182.3177570095
[2026-05-02 06:34:47] 2026-05-02 10:34:14,335 | INFO     | intersect: 2592182.3177570095
[2026-05-02 06:34:47] 2026-05-02 10:34:14,336 | INFO     | chi2: 0.12564740619445883
[2026-05-02 06:34:47] 2026-05-02 10:34:14,336 | INFO     | current chi2=0.12564740619445883 (change=92.57130825536923 %)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,336 | INFO     | sum of square deviations: 329031285.5
[2026-05-02 06:34:47] 2026-05-02 10:34:14,336 | INFO     | sum of deviations: -16546862318.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,337 | INFO     | mean x (centered): 0.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,337 | INFO     | mean y: 2592693.098039216
[2026-05-02 06:34:47] 2026-05-02 10:34:14,337 | INFO     | intersect: 2592693.098039216
[2026-05-02 06:34:47] 2026-05-02 10:34:14,337 | INFO     | chi2: 0.09573644621476662
[2026-05-02 06:34:47] 2026-05-02 10:34:14,337 | INFO     | current chi2=0.09573644621476662 (change=23.80547349572848 %)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,337 | INFO     | left removable region: 10
[2026-05-02 06:34:47] 2026-05-02 10:34:14,337 | INFO     | sum of square deviations: 274312120.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,338 | INFO     | sum of deviations: -15210207260.000002
[2026-05-02 06:34:47] 2026-05-02 10:34:14,338 | INFO     | mean x (centered): 0.0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,338 | INFO     | mean y: 2597168.7708333335
[2026-05-02 06:34:47] 2026-05-02 10:34:14,338 | INFO     | intersect: 2597168.7708333335
[2026-05-02 06:34:47] 2026-05-02 10:34:14,338 | INFO     | chi2: 0.08936146101193726
[2026-05-02 06:34:47] 2026-05-02 10:34:14,339 | INFO     | current memory leak: -55.45 B/s (using 96 data points, chi2=0.09)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,339 | INFO     | could have reported an average CPU frequency of 1729 MHz (7 samples)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,339 | INFO     | ..............................
[2026-05-02 06:34:47] 2026-05-02 10:34:14,339 | INFO     | . Timing measurements:
[2026-05-02 06:34:47] 2026-05-02 10:34:14,339 | INFO     | . get job = 0 s
[2026-05-02 06:34:47] 2026-05-02 10:34:14,339 | INFO     | . initial setup = 8 s
[2026-05-02 06:34:47] 2026-05-02 10:34:14,340 | INFO     | . payload setup = 17 s
[2026-05-02 06:34:47] 2026-05-02 10:34:14,340 | INFO     | . stage-in = 0 s
[2026-05-02 06:34:47] 2026-05-02 10:34:14,340 | INFO     | . payload execution = 6810 s
[2026-05-02 06:34:47] 2026-05-02 10:34:14,340 | INFO     | . stage-out = 0 s
[2026-05-02 06:34:47] 2026-05-02 10:34:14,340 | INFO     | . log creation = 0 s
[2026-05-02 06:34:47] 2026-05-02 10:34:14,340 | INFO     | ..............................
[2026-05-02 06:34:47] 2026-05-02 10:34:14,417 | INFO     | 
[2026-05-02 06:34:47] 2026-05-02 10:34:14,417 | INFO     | job summary report
[2026-05-02 06:34:47] 2026-05-02 10:34:14,417 | INFO     | --------------------------------------------------
[2026-05-02 06:34:47] 2026-05-02 10:34:14,417 | INFO     | PanDA job id: 7123453278
[2026-05-02 06:34:47] 2026-05-02 10:34:14,418 | INFO     | task id: 49263200
[2026-05-02 06:34:47] 2026-05-02 10:34:14,418 | INFO     | errors: (none)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,418 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 06:34:47] 2026-05-02 10:34:14,418 | INFO     | pilot state: finished 
[2026-05-02 06:34:47] 2026-05-02 10:34:14,418 | INFO     | transexitcode: 0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,419 | INFO     | exeerrorcode: 0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,419 | INFO     | exeerrordiag: 
[2026-05-02 06:34:47] 2026-05-02 10:34:14,419 | INFO     | exitcode: 0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,419 | INFO     | exitmsg: OK
[2026-05-02 06:34:47] 2026-05-02 10:34:14,419 | INFO     | cpuconsumptiontime: 50039 s
[2026-05-02 06:34:47] 2026-05-02 10:34:14,419 | INFO     | nevents: 400
[2026-05-02 06:34:47] 2026-05-02 10:34:14,420 | INFO     | neventsw: 0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,420 | INFO     | pid: 22573
[2026-05-02 06:34:47] 2026-05-02 10:34:14,420 | INFO     | pgrp: 22573
[2026-05-02 06:34:47] 2026-05-02 10:34:14,420 | INFO     | corecount: 8
[2026-05-02 06:34:47] 2026-05-02 10:34:14,420 | INFO     | event service: False
[2026-05-02 06:34:47] 2026-05-02 10:34:14,420 | INFO     | sizes: {0: 2275302, 1: 2277187, 12: 2277187, 6830: 2304433, 6832: 2313431, 6833: 2313487, 6834: 2313809}
[2026-05-02 06:34:47] 2026-05-02 10:34:14,421 | INFO     | --------------------------------------------------
[2026-05-02 06:34:47] 2026-05-02 10:34:14,421 | INFO     | 
[2026-05-02 06:34:47] 2026-05-02 10:34:14,421 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-02 06:34:47] 2026-05-02 10:34:14,450 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,451 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,451 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,451 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,454 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,454 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 06:34:47] 2026-05-02 10:34:14,454 | INFO     | job 7123453278 has completed (purged errors)
[2026-05-02 06:34:47] 2026-05-02 10:34:14,455 | INFO     | overall cleanup function is called
[2026-05-02 06:34:47] 2026-05-02 10:34:15,463 | INFO     | --- collectZombieJob: --- 10, [22573]
[2026-05-02 06:34:47] 2026-05-02 10:34:15,463 | INFO     | zombie collector waiting for pid 22573
[2026-05-02 06:34:47] 2026-05-02 10:34:15,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 06:34:47] 2026-05-02 10:34:15,463 | INFO     | collected zombie processes
[2026-05-02 06:34:47] 2026-05-02 10:34:15,463 | INFO     | will attempt to kill all subprocesses of pid=22573
[2026-05-02 06:34:47] 2026-05-02 10:34:15,532 | INFO     | process IDs to be killed: [22573] (in reverse order)
[2026-05-02 06:34:47] 2026-05-02 10:34:15,586 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 06:34:47] 2026-05-02 10:34:15,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 06:34:47] 2026-05-02 10:34:15,592 | INFO     | did not find any defunct processes belonging to 22573
[2026-05-02 06:34:47] 2026-05-02 10:34:15,594 | INFO     | did not find any defunct processes belonging to 22573
[2026-05-02 06:34:47] 2026-05-02 10:34:15,595 | INFO     | Ready for new job
[2026-05-02 06:34:47] 2026-05-02 10:34:15,596 | INFO     | ***************************************
[2026-05-02 06:34:47] 2026-05-02 10:34:15,596 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 06:34:47] 2026-05-02 10:34:15,596 | INFO     | ***************************************
[2026-05-02 06:34:47] 2026-05-02 10:34:15,596 | INFO     | 
[2026-05-02 06:34:47] 2026-05-02 10:34:15,597 | INFO     | architecture information:
[2026-05-02 06:34:47] 2026-05-02 10:34:15,598 | INFO     | executing command: cat /etc/os-release
[2026-05-02 06:34:47] 2026-05-02 10:34:15,618 | INFO     | cat /etc/os-release:
[2026-05-02 06:34:47] NAME="CentOS Linux"
[2026-05-02 06:34:47] VERSION="7 (Core)"
[2026-05-02 06:34:47] ID="centos"
[2026-05-02 06:34:47] ID_LIKE="rhel fedora"
[2026-05-02 06:34:47] VERSION_ID="7"
[2026-05-02 06:34:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 06:34:47] ANSI_COLOR="0;31"
[2026-05-02 06:34:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 06:34:47] HOME_URL="https://www.centos.org/"
[2026-05-02 06:34:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 06:34:47] 
[2026-05-02 06:34:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 06:34:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 06:34:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 06:34:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 06:34:47] 
[2026-05-02 06:34:47] 2026-05-02 10:34:15,618 | INFO     | ***************************************
[2026-05-02 06:34:47] 2026-05-02 10:34:16,122 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-02 06:34:47] 2026-05-02 10:34:16,141 | INFO     | sufficient remaining disk space (18527289344 B)
[2026-05-02 06:34:47] 2026-05-02 10:34:16,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 06:34:47] 2026-05-02 10:34:16,142 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 06:34:47] 2026-05-02 10:34:16,143 | INFO     | update_server=False
[2026-05-02 06:34:47] 2026-05-02 10:34:16,143 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 06:34:47] 2026-05-02 10:34:16,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 06:34:47] 2026-05-02 10:34:16,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 06:34:47] 2026-05-02 10:34:16,307 | INFO     | all payload control threads have been joined
[2026-05-02 06:34:47] 2026-05-02 10:34:16,450 | INFO     | all data control threads have been joined
[2026-05-02 06:34:47] 2026-05-02 10:34:16,571 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-02 06:34:47] 2026-05-02 10:34:16,572 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-02 06:34:47] 2026-05-02 10:34:16,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 06:34:47] 2026-05-02 10:34:16,572 | INFO     | will abort loop
[2026-05-02 06:34:47] 2026-05-02 10:34:16,923 | INFO     | all job control threads have been joined
[2026-05-02 06:34:47] 2026-05-02 10:34:17,149 | INFO     | [job] retrieve thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:17,149 | INFO     | [job] queue monitor thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:17,312 | INFO     | [payload] control thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:17,455 | INFO     | [data] control thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:17,574 | INFO     | [job] job monitor thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:17,603 | INFO     | [job] validate thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:17,841 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:17,929 | INFO     | [job] control thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:18,085 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:18,111 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:18,149 | INFO     | [data] copytool_out thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:18,421 | INFO     | [data] copytool_in thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:18,501 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:18,579 | INFO     | [payload] failed_post thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:18,585 | INFO     | [payload] validate_post thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:19,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 06:34:47] 2026-05-02 10:34:19,653 | INFO     | [monitor] cgroup control has ended
[2026-05-02 06:34:47] 2026-05-02 10:34:23,428 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 06:34:47] 2026-05-02 10:34:24,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686979348288)>', '<ExcThread(monitor, started 139686018279168)>']
[2026-05-02 06:34:47] 2026-05-02 10:34:29,189 | INFO     | all workflow threads have been joined
[2026-05-02 06:34:47] 2026-05-02 10:34:29,189 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 06:34:47] 2026-05-02 10:34:29,195 | INFO     | traces error code: 0
[2026-05-02 06:34:47] 2026-05-02 10:34:29,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 06:34:47] 2026-05-02 10:34:47,180 | INFO     | PID=17991 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-02 06:34:47] 2026-05-02 10:34:47,182 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 06:34:47] 2026-05-02 10:34:47,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 06:34:47] 2026-05-02 10:34:47,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 06:34:47] 2026-05-02 10:34:47,182 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 06:34:47] 2026-05-02 10:34:47,182 | INFO     | [monitor] control thread has ended
[2026-05-02 06:34:47] 2026-05-02 10:34:47,286 [wrapper] ==== pilot stdout END ====
[2026-05-02 06:34:47] 2026-05-02 10:34:47,291 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 06:34:47] 2026-05-02 10:34:47,295 [wrapper] pilotpid: 17991
[2026-05-02 06:34:47] 2026-05-02 10:34:47,300 [wrapper] Pilot exit status: 0
[2026-05-02 06:34:47] 2026-05-02 10:34:47,317 [wrapper] pandaids: 7123453278
[2026-05-02 06:34:47] 2026-05-02 10:34:47,361 [wrapper] cleanup supervisor_pilot   509 17992
[2026-05-02 06:34:47] 2026-05-02 10:34:47,366 [wrapper] Test setup, not cleaning
[2026-05-02 06:34:47] 2026-05-02 10:34:47,371 [wrapper] apfmon messages muted
[2026-05-02 06:34:47] 2026-05-02 10:34:47,375 [wrapper] ==== wrapper stdout END ====
[2026-05-02 06:34:47] 2026-05-02 10:34:47,380 [wrapper] ==== wrapper stderr END ====
[2026-05-02 06:34:47]  *** Error codes and diagnostics ***
[2026-05-02 06:34:47]     "exeErrorCode": 0,
[2026-05-02 06:34:47]     "pilotErrorCode": 0,
[2026-05-02 06:34:47]  *** Listing of results directory ***
[2026-05-02 06:34:47] total 421024
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas    683926 May  2 00:06 pilot3.tar.gz
[2026-05-02 06:34:47] -rwx------ 1 boincer umatlas     36322 May  2 00:06 runpilot2-wrapper.sh
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas      5631 May  2 00:07 queuedata.json
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas       100 May  2 04:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 06:34:47] -rwxr-xr-x 1 boincer umatlas      7986 May  2 04:39 run_atlas
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas       105 May  2 04:39 job.xml
[2026-05-02 06:34:47] -rw-r--r-- 2 boincer umatlas 225753072 May  2 04:39 EVNT.49263198._001936.pool.root.1
[2026-05-02 06:34:47] -rw-r--r-- 2 boincer umatlas     15667 May  2 04:39 start_atlas.sh
[2026-05-02 06:34:47] drwxrwx--x 2 boincer umatlas      4096 May  2 04:39 shared
[2026-05-02 06:34:47] -rw-r--r-- 2 boincer umatlas    697426 May  2 04:39 input.tar.gz
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas         0 May  2 04:39 boinc_lockfile
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas      2577 May  2 04:39 pandaJob.out
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas        57 May  2 04:39 setup.sh.local
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas   1002968 May  2 04:40 agis_schedconf.cvmfs.json
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas   1508687 May  2 04:40 agis_ddmendpoints.agis.ALL.json
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas       432 May  2 04:40 workernode_map.json
[2026-05-02 06:34:47] drwx------ 5 boincer umatlas      4096 May  2 04:40 pilot3
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas      5824 May  2 06:31 init_data.xml
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas 199304441 May  2 06:33 HITS.49263200._089000.pool.root.1
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas       487 May  2 06:33 boinc_task_state.xml
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas      1048 May  2 06:34 memory_monitor_summary.json
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas    324466 May  2 06:34 log.49263200._089000.job.log.tgz.1
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas      6426 May  2 06:34 heartbeat_new.json
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas      6317 May  2 06:34 heartbeat.json
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas      8192 May  2 06:34 boinc_mmap_file
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas        27 May  2 06:34 wrapper_checkpoint.txt
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas        95 May  2 06:34 pilot_heartbeat.json
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas       745 May  2 06:34 pilotlog.txt
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas    643642 May  2 06:34 log.49263200._089000.job.log.1
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas       357 May  2 06:34 output.list
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas       410 May  2 06:34 runtime_log
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas    983040 May  2 06:34 result.tar.gz
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas      8959 May  2 06:34 runtime_log.err
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas       658 May  2 06:34 785b35c1ca98.diag
[2026-05-02 06:34:47] -rw-r--r-- 1 boincer umatlas     21199 May  2 06:34 stderr.txt
[2026-05-02 06:34:47] HITS file was successfully produced:
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas 199304441 May  2 06:33 shared/HITS.pool.root.1
[2026-05-02 06:34:47]  *** Contents of shared directory: ***
[2026-05-02 06:34:47] total 416764
[2026-05-02 06:34:47] -rw-r--r-- 2 boincer umatlas 225753072 May  2 04:39 ATLAS.root_0
[2026-05-02 06:34:47] -rw-r--r-- 2 boincer umatlas     15667 May  2 04:39 start_atlas.sh
[2026-05-02 06:34:47] -rw-r--r-- 2 boincer umatlas    697426 May  2 04:39 input.tar.gz
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas 199304441 May  2 06:33 HITS.pool.root.1
[2026-05-02 06:34:47] -rw------- 1 boincer umatlas    983040 May  2 06:34 result.tar.gz
06:34:49 (14310): run_atlas exited; CPU time 50003.947424
06:34:49 (14310): called boinc_finish(0)

</stderr_txt>
]]>

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