Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:17:37 (3035401): wrapper (7.7.26015): starting
22:17:37 (3035401): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 22:17:37] Arguments: --nthreads 4
[2026-05-03 22:17:37] Threads: 4
[2026-05-03 22:17:37] Checking for CVMFS
[2026-05-03 22:17:37] No cvmfs_config command found, will try listing directly
[2026-05-03 22:17:37] CVMFS is ok
[2026-05-03 22:17:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 22:17:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 22:17:37] Further information can be found at the LHC@home message board.
[2026-05-03 22:17:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 22:17:37] Checking for apptainer binary...
[2026-05-03 22:17:37] which: no apptainer in ((null))
[2026-05-03 22:17:37] apptainer is not installed, using version from CVMFS
[2026-05-03 22:17:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 22:17:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-03 22:17:37] apptainer works
[2026-05-03 22:17:37] Set ATHENA_PROC_NUMBER=4
[2026-05-03 22:17:37] Set ATHENA_CORE_NUMBER=4
[2026-05-03 22:17:37] Starting ATLAS job with PandaID=7123488297
[2026-05-03 22:17:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 01:53:21]  *** The last 200 lines of the pilot log: ***
[2026-05-04 01:53:21] 2026-05-03 23:52:31,588 | INFO     | number of running child processes to parent process 3044257: 1
[2026-05-04 01:53:21] 2026-05-03 23:52:31,589 | INFO     | maximum number of monitored processes: 6
[2026-05-04 01:53:21] 2026-05-03 23:52:32,073 | INFO     | job 7123488297 has state=finished
[2026-05-04 01:53:21] 2026-05-03 23:52:32,073 | INFO     | preparing for final server update for job 7123488297 in state='finished'
[2026-05-04 01:53:21] 2026-05-03 23:52:32,073 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/0/PanDA_Pilot-7123488297/jobReport.json
[2026-05-04 01:53:21] 2026-05-03 23:52:32,075 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/0/workernode_map.json
[2026-05-04 01:53:21] 2026-05-03 23:52:32,076 | INFO     | this job has now completed (state=finished)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,076 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,076 | INFO     | log transfer has been attempted: DONE
[2026-05-04 01:53:21] 2026-05-03 23:52:32,076 | INFO     | job 7123488297 has finished - writing final server update
[2026-05-04 01:53:21] 2026-05-03 23:52:32,077 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_888305/.job.ad'
[2026-05-04 01:53:21] 2026-05-03 23:52:32,077 | INFO     | total number of processed events: 400 (read)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,088 | INFO     | using path: /var/lib/boinc/var/slot60/slots/0/PanDA_Pilot-7123488297/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,089 | INFO     | extracted standard info from prmon json
[2026-05-04 01:53:21] 2026-05-03 23:52:32,089 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 01:53:21] 2026-05-03 23:52:32,089 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 01:53:21] 2026-05-03 23:52:32,090 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 01:53:21] 2026-05-03 23:52:32,093 | INFO     | fitting pss+swap vs Time
[2026-05-04 01:53:21] 2026-05-03 23:52:32,094 | INFO     | sum of square deviations: 2912836010.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,095 | INFO     | sum of deviations: 11261912842.000008
[2026-05-04 01:53:21] 2026-05-03 23:52:32,095 | INFO     | mean x (centered): 0.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,095 | INFO     | mean y: 2333522.559241706
[2026-05-04 01:53:21] 2026-05-03 23:52:32,095 | INFO     | intersect: 2333522.559241706
[2026-05-04 01:53:21] 2026-05-03 23:52:32,096 | INFO     | chi2: 1.3456244339149968
[2026-05-04 01:53:21] 2026-05-03 23:52:32,096 | INFO     | sum of square deviations: 2710627567.5
[2026-05-04 01:53:21] 2026-05-03 23:52:32,097 | INFO     | sum of deviations: 10919366427.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,097 | INFO     | mean x (centered): 0.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,097 | INFO     | mean y: 2333264.165048544
[2026-05-04 01:53:21] 2026-05-03 23:52:32,098 | INFO     | intersect: 2333264.165048544
[2026-05-04 01:53:21] 2026-05-03 23:52:32,098 | INFO     | chi2: 1.346200960250652
[2026-05-04 01:53:21] 2026-05-03 23:52:32,098 | INFO     | current chi2=1.346200960250652 (change=-0.04284452044154924 %)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,098 | INFO     | right removable region: 205
[2026-05-04 01:53:21] 2026-05-03 23:52:32,098 | INFO     | sum of square deviations: 2710627567.5
[2026-05-04 01:53:21] 2026-05-03 23:52:32,100 | INFO     | sum of deviations: -15048739894.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,100 | INFO     | mean x (centered): 0.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,100 | INFO     | mean y: 2353110.5533980583
[2026-05-04 01:53:21] 2026-05-03 23:52:32,100 | INFO     | intersect: 2353110.5533980583
[2026-05-04 01:53:21] 2026-05-03 23:52:32,100 | INFO     | chi2: 0.030240462315092746
[2026-05-04 01:53:21] 2026-05-03 23:52:32,100 | INFO     | current chi2=0.030240462315092746 (change=97.75268183655746 %)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,101 | INFO     | sum of square deviations: 2518000700.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,102 | INFO     | sum of deviations: -12820359508.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,102 | INFO     | mean x (centered): 0.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,102 | INFO     | mean y: 2351325.542288557
[2026-05-04 01:53:21] 2026-05-03 23:52:32,102 | INFO     | intersect: 2351325.542288557
[2026-05-04 01:53:21] 2026-05-03 23:52:32,103 | INFO     | chi2: 0.024865802741715785
[2026-05-04 01:53:21] 2026-05-03 23:52:32,103 | INFO     | current chi2=0.024865802741715785 (change=17.773073431799077 %)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,103 | INFO     | left removable region: 10
[2026-05-04 01:53:21] 2026-05-03 23:52:32,103 | INFO     | sum of square deviations: 2299168690.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,104 | INFO     | sum of deviations: -12563326857.999998
[2026-05-04 01:53:21] 2026-05-03 23:52:32,104 | INFO     | mean x (centered): 0.0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,105 | INFO     | mean y: 2351540.4102564105
[2026-05-04 01:53:21] 2026-05-03 23:52:32,105 | INFO     | intersect: 2351540.4102564105
[2026-05-04 01:53:21] 2026-05-03 23:52:32,105 | INFO     | chi2: 0.024205918035579498
[2026-05-04 01:53:21] 2026-05-03 23:52:32,105 | INFO     | current memory leak: -5.46 B/s (using 195 data points, chi2=0.02)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | could have reported an average CPU frequency of 2486 MHz (11 samples)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | ..............................
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | . Timing measurements:
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | . get job = 0 s
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | . initial setup = 6 s
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | . payload setup = 10 s
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | . stage-in = 0 s
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | . payload execution = 12847 s
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | . stage-out = 1 s
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | . log creation = 0 s
[2026-05-04 01:53:21] 2026-05-03 23:52:32,106 | INFO     | ..............................
[2026-05-04 01:53:21] 2026-05-03 23:52:32,196 | INFO     | 
[2026-05-04 01:53:21] 2026-05-03 23:52:32,200 | INFO     | job summary report
[2026-05-04 01:53:21] 2026-05-03 23:52:32,200 | INFO     | --------------------------------------------------
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | PanDA job id: 7123488297
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | task id: 49263200
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | errors: (none)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | pilot state: finished 
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | transexitcode: 0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | exeerrorcode: 0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | exeerrordiag: 
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | exitcode: 0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | exitmsg: OK
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | cpuconsumptiontime: 46319 s
[2026-05-04 01:53:21] 2026-05-03 23:52:32,201 | INFO     | nevents: 400
[2026-05-04 01:53:21] 2026-05-03 23:52:32,202 | INFO     | neventsw: 0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,202 | INFO     | pid: 3044257
[2026-05-04 01:53:21] 2026-05-03 23:52:32,202 | INFO     | pgrp: 3044257
[2026-05-04 01:53:21] 2026-05-03 23:52:32,202 | INFO     | corecount: 4
[2026-05-04 01:53:21] 2026-05-03 23:52:32,202 | INFO     | event service: False
[2026-05-04 01:53:21] 2026-05-03 23:52:32,202 | INFO     | sizes: {0: 2275369, 1: 2277198, 12: 2277198, 12861: 2307114, 12862: 2307113, 12863: 2316189, 12865: 2316373, 12866: 2316567}
[2026-05-04 01:53:21] 2026-05-03 23:52:32,202 | INFO     | --------------------------------------------------
[2026-05-04 01:53:21] 2026-05-03 23:52:32,202 | INFO     | 
[2026-05-04 01:53:21] 2026-05-03 23:52:32,202 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/0
[2026-05-04 01:53:21] 2026-05-03 23:52:32,229 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,229 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,231 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,231 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 01:53:21] 2026-05-03 23:52:32,231 | INFO     | job 7123488297 has completed (purged errors)
[2026-05-04 01:53:21] 2026-05-03 23:52:32,231 | INFO     | overall cleanup function is called
[2026-05-04 01:53:21] 2026-05-03 23:52:33,243 | INFO     | --- collectZombieJob: --- 10, [3044257]
[2026-05-04 01:53:21] 2026-05-03 23:52:33,243 | INFO     | zombie collector waiting for pid 3044257
[2026-05-04 01:53:21] 2026-05-03 23:52:33,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 01:53:21] 2026-05-03 23:52:33,244 | INFO     | collected zombie processes
[2026-05-04 01:53:21] 2026-05-03 23:52:33,244 | INFO     | will attempt to kill all subprocesses of pid=3044257
[2026-05-04 01:53:21] 2026-05-03 23:52:33,553 | INFO     | process IDs to be killed: [3044257] (in reverse order)
[2026-05-04 01:53:21] 2026-05-03 23:52:33,685 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 01:53:21] 2026-05-03 23:52:33,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 01:53:21] 2026-05-03 23:52:33,700 | INFO     | did not find any defunct processes belonging to 3044257
[2026-05-04 01:53:21] 2026-05-03 23:52:33,713 | INFO     | did not find any defunct processes belonging to 3044257
[2026-05-04 01:53:21] 2026-05-03 23:52:33,714 | INFO     | Ready for new job
[2026-05-04 01:53:21] 2026-05-03 23:52:33,716 | INFO     | ***************************************
[2026-05-04 01:53:21] 2026-05-03 23:52:33,716 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 01:53:21] 2026-05-03 23:52:33,716 | INFO     | ***************************************
[2026-05-04 01:53:21] 2026-05-03 23:52:33,716 | INFO     | 
[2026-05-04 01:53:21] 2026-05-03 23:52:33,720 | INFO     | architecture information:
[2026-05-04 01:53:21] 2026-05-03 23:52:33,720 | INFO     | executing command: cat /etc/os-release
[2026-05-04 01:53:21] 2026-05-03 23:52:33,737 | INFO     | cat /etc/os-release:
[2026-05-04 01:53:21] NAME="CentOS Linux"
[2026-05-04 01:53:21] VERSION="7 (Core)"
[2026-05-04 01:53:21] ID="centos"
[2026-05-04 01:53:21] ID_LIKE="rhel fedora"
[2026-05-04 01:53:21] VERSION_ID="7"
[2026-05-04 01:53:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 01:53:21] ANSI_COLOR="0;31"
[2026-05-04 01:53:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 01:53:21] HOME_URL="https://www.centos.org/"
[2026-05-04 01:53:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 01:53:21] 
[2026-05-04 01:53:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 01:53:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 01:53:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 01:53:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 01:53:21] 
[2026-05-04 01:53:21] 2026-05-03 23:52:33,738 | INFO     | ***************************************
[2026-05-04 01:53:21] 2026-05-03 23:52:34,241 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/0
[2026-05-04 01:53:21] 2026-05-03 23:52:34,258 | INFO     | sufficient remaining disk space (44479545344 B)
[2026-05-04 01:53:21] 2026-05-03 23:52:34,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 01:53:21] 2026-05-03 23:52:34,259 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 01:53:21] 2026-05-03 23:52:34,259 | INFO     | update_server=False
[2026-05-04 01:53:21] 2026-05-03 23:52:34,259 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 01:53:21] 2026-05-03 23:52:34,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 01:53:21] 2026-05-03 23:52:34,992 | INFO     | all data control threads have been joined
[2026-05-04 01:53:21] 2026-05-03 23:52:35,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 01:53:21] 2026-05-03 23:52:35,097 | INFO     | aborting loop
[2026-05-04 01:53:21] 2026-05-03 23:52:35,265 | INFO     | [job] retrieve thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:35,362 | INFO     | [payload] failed_post thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:35,390 | INFO     | all payload control threads have been joined
[2026-05-04 01:53:21] 2026-05-03 23:52:35,433 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:35,502 | INFO     | all job control threads have been joined
[2026-05-04 01:53:21] 2026-05-03 23:52:35,609 | INFO     | [job] validate thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:35,773 | INFO     | [data] copytool_in thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:35,802 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:35,881 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:35,997 | INFO     | [data] control thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:36,101 | INFO     | [job] job monitor thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:36,394 | INFO     | [data] copytool_out thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:36,395 | INFO     | [payload] control thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:36,503 | INFO     | [job] control thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:36,788 | INFO     | [payload] validate_post thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:36,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 01:53:21] 2026-05-03 23:52:37,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 01:53:21] 2026-05-03 23:52:38,212 | INFO     | [job] queue monitor thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:40,904 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:52:45,308 | INFO     | job.realtimelogging is not enabled
[2026-05-04 01:53:21] 2026-05-03 23:52:46,313 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 01:53:21] 2026-05-03 23:53:04,949 | INFO     | PID=3039224 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 01:53:21] 2026-05-03 23:53:04,949 | INFO     | .. there are 13 such processes running
[2026-05-04 01:53:21] 2026-05-03 23:53:04,949 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 01:53:21] 2026-05-03 23:53:04,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 01:53:21] 2026-05-03 23:53:04,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 01:53:21] 2026-05-03 23:53:15,468 | INFO     | [monitor] cgroup control has ended
[2026-05-04 01:53:21] 2026-05-03 23:53:15,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22714992568128)>', '<ExcThread(monitor, started 22714753754880)>']
[2026-05-04 01:53:21] 2026-05-03 23:53:15,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 01:53:21] 2026-05-03 23:53:15,997 | INFO     | [monitor] control thread has ended
[2026-05-04 01:53:21] 2026-05-03 23:53:20,941 | INFO     | all workflow threads have been joined
[2026-05-04 01:53:21] 2026-05-03 23:53:20,942 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 01:53:21] 2026-05-03 23:53:20,942 | INFO     | traces error code: 0
[2026-05-04 01:53:21] 2026-05-03 23:53:20,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 01:53:21] 2026-05-03 23:53:21,087 [wrapper] ==== pilot stdout END ====
[2026-05-04 01:53:21] 2026-05-03 23:53:21,090 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 01:53:21] 2026-05-03 23:53:21,093 [wrapper] pilotpid: 3039224
[2026-05-04 01:53:21] 2026-05-03 23:53:21,095 [wrapper] Pilot exit status: 0
[2026-05-04 01:53:21] 2026-05-03 23:53:21,107 [wrapper] pandaids: 7123488297
[2026-05-04 01:53:21] 2026-05-03 23:53:21,184 [wrapper] cleanup supervisor_pilot 3323610 3039225
[2026-05-04 01:53:21] 2026-05-03 23:53:21,188 [wrapper] Test setup, not cleaning
[2026-05-04 01:53:21] 2026-05-03 23:53:21,192 [wrapper] apfmon messages muted
[2026-05-04 01:53:21] 2026-05-03 23:53:21,195 [wrapper] ==== wrapper stdout END ====
[2026-05-04 01:53:21] 2026-05-03 23:53:21,198 [wrapper] ==== wrapper stderr END ====
[2026-05-04 01:53:21]  *** Error codes and diagnostics ***
[2026-05-04 01:53:21]     "exeErrorCode": 0,
[2026-05-04 01:53:21]     "pilotErrorCode": 0,
[2026-05-04 01:53:21]  *** Listing of results directory ***
[2026-05-04 01:53:21] total 419408
[2026-05-04 01:53:21] -rwx------. 1 boinc boinc     36322 May  2 06:05 runpilot2-wrapper.sh
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc    683926 May  2 06:06 pilot3.tar.gz
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc      5631 May  2 06:07 queuedata.json
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc       100 May  3 22:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 01:53:21] -rwxr-xr-x. 1 boinc boinc      7986 May  3 22:17 run_atlas
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc       105 May  3 22:17 job.xml
[2026-05-04 01:53:21] -rw-r--r--. 2 boinc boinc 222906942 May  3 22:17 EVNT.49263198._001997.pool.root.1
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc      6482 May  3 22:17 init_data.xml
[2026-05-04 01:53:21] -rw-r--r--. 2 boinc boinc     15667 May  3 22:17 start_atlas.sh
[2026-05-04 01:53:21] drwxrwx--x. 2 boinc boinc      4096 May  3 22:17 shared
[2026-05-04 01:53:21] -rw-r--r--. 2 boinc boinc    697431 May  3 22:17 input.tar.gz
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc         0 May  3 22:17 boinc_lockfile
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc      2577 May  3 22:17 pandaJob.out
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc   1003003 May  3 22:17 agis_schedconf.cvmfs.json
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc       452 May  3 22:17 workernode_map.json
[2026-05-04 01:53:21] drwx------. 5 boinc boinc      4096 May  3 22:17 pilot3
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc       488 May  4 01:51 boinc_task_state.xml
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc 199390107 May  4 01:51 HITS.49263200._090554.pool.root.1
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc        95 May  4 01:52 pilot_heartbeat.json
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc      1033 May  4 01:52 memory_monitor_summary.json
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc   1508687 May  4 01:52 agis_ddmendpoints.agis.ALL.json
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc    327175 May  4 01:52 log.49263200._090554.job.log.tgz.1
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc      6427 May  4 01:52 heartbeat_new.json
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc      6318 May  4 01:52 heartbeat.json
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc      8192 May  4 01:52 boinc_mmap_file
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc        28 May  4 01:52 wrapper_checkpoint.txt
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc      4904 May  4 01:53 pilotlog.txt
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc   1193233 May  4 01:53 log.49263200._090554.job.log.1
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc       357 May  4 01:53 output.list
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc       410 May  4 01:53 runtime_log
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc   1536000 May  4 01:53 result.tar.gz
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc       665 May  4 01:53 781cbedf5aa0.diag
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc      8828 May  4 01:53 runtime_log.err
[2026-05-04 01:53:21] -rw-r--r--. 1 boinc boinc     21045 May  4 01:53 stderr.txt
[2026-05-04 01:53:21] HITS file was successfully produced:
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc 199390107 May  4 01:51 shared/HITS.pool.root.1
[2026-05-04 01:53:21]  *** Contents of shared directory: ***
[2026-05-04 01:53:21] total 414612
[2026-05-04 01:53:21] -rw-r--r--. 2 boinc boinc 222906942 May  3 22:17 ATLAS.root_0
[2026-05-04 01:53:21] -rw-r--r--. 2 boinc boinc     15667 May  3 22:17 start_atlas.sh
[2026-05-04 01:53:21] -rw-r--r--. 2 boinc boinc    697431 May  3 22:17 input.tar.gz
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc 199390107 May  4 01:51 HITS.pool.root.1
[2026-05-04 01:53:21] -rw-------. 1 boinc boinc   1536000 May  4 01:53 result.tar.gz
01:53:22 (3035401): run_atlas exited; CPU time 46789.327839
01:53:22 (3035401): called boinc_finish(0)

</stderr_txt>
]]>

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