Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:15:05 (3157617): wrapper (7.7.26015): starting
12:15:05 (3157617): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 12:15:05] Arguments: --nthreads 4
[2026-05-03 12:15:05] Threads: 4
[2026-05-03 12:15:05] Checking for CVMFS
[2026-05-03 12:15:05] No cvmfs_config command found, will try listing directly
[2026-05-03 12:15:05] CVMFS is ok
[2026-05-03 12:15:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 12:15:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 12:15:05] Further information can be found at the LHC@home message board.
[2026-05-03 12:15:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 12:15:05] Checking for apptainer binary...
[2026-05-03 12:15:05] which: no apptainer in ((null))
[2026-05-03 12:15:05] apptainer is not installed, using version from CVMFS
[2026-05-03 12:15:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 12:15:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot24/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-05-03 12:15:05] apptainer works
[2026-05-03 12:15:05] Set ATHENA_PROC_NUMBER=4
[2026-05-03 12:15:05] Set ATHENA_CORE_NUMBER=4
[2026-05-03 12:15:05] Starting ATLAS job with PandaID=7123455961
[2026-05-03 12:15:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot24/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 15:34:58]  *** The last 200 lines of the pilot log: ***
[2026-05-03 15:34:58] 2026-05-03 13:33:59,288 | INFO     | monitor loop #868: job 0:7123455961 is in state 'finished'
[2026-05-03 15:34:58] 2026-05-03 13:33:59,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,098 | INFO     | job 7123455961 has state=finished
[2026-05-03 15:34:58] 2026-05-03 13:34:00,098 | INFO     | preparing for final server update for job 7123455961 in state='finished'
[2026-05-03 15:34:58] 2026-05-03 13:34:00,099 | INFO     | reading metadata from: /var/lib/boinc/var/slot24/slots/3/PanDA_Pilot-7123455961/jobReport.json
[2026-05-03 15:34:58] 2026-05-03 13:34:00,100 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot24/slots/3/workernode_map.json
[2026-05-03 15:34:58] 2026-05-03 13:34:00,101 | INFO     | this job has now completed (state=finished)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,101 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,101 | INFO     | log transfer has been attempted: DONE
[2026-05-03 15:34:58] 2026-05-03 13:34:00,101 | INFO     | job 7123455961 has finished - writing final server update
[2026-05-03 15:34:58] 2026-05-03 13:34:00,101 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_267303/.job.ad'
[2026-05-03 15:34:58] 2026-05-03 13:34:00,101 | INFO     | total number of processed events: 400 (read)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,113 | INFO     | using path: /var/lib/boinc/var/slot24/slots/3/PanDA_Pilot-7123455961/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,114 | INFO     | extracted standard info from prmon json
[2026-05-03 15:34:58] 2026-05-03 13:34:00,114 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 15:34:58] 2026-05-03 13:34:00,114 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 15:34:58] 2026-05-03 13:34:00,114 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 15:34:58] 2026-05-03 13:34:00,118 | INFO     | fitting pss+swap vs Time
[2026-05-03 15:34:58] 2026-05-03 13:34:00,118 | INFO     | sum of square deviations: 2299168690.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,120 | INFO     | sum of deviations: -36575353987.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,120 | INFO     | mean x (centered): 0.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,120 | INFO     | mean y: 2383326.38974359
[2026-05-03 15:34:58] 2026-05-03 13:34:00,120 | INFO     | intersect: 2383326.38974359
[2026-05-03 15:34:58] 2026-05-03 13:34:00,120 | INFO     | chi2: 1.6099043811235116
[2026-05-03 15:34:58] 2026-05-03 13:34:00,121 | INFO     | sum of square deviations: 2126802667.5
[2026-05-03 15:34:58] 2026-05-03 13:34:00,122 | INFO     | sum of deviations: -35338381957.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,122 | INFO     | mean x (centered): 0.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,122 | INFO     | mean y: 2384421.0315789473
[2026-05-03 15:34:58] 2026-05-03 13:34:00,122 | INFO     | intersect: 2384421.0315789473
[2026-05-03 15:34:58] 2026-05-03 13:34:00,123 | INFO     | chi2: 1.6042694094694459
[2026-05-03 15:34:58] 2026-05-03 13:34:00,123 | INFO     | current chi2=1.6042694094694459 (change=0.3500190272252868 %)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,123 | INFO     | right removable region: 189
[2026-05-03 15:34:58] 2026-05-03 13:34:00,123 | INFO     | sum of square deviations: 2126802667.5
[2026-05-03 15:34:58] 2026-05-03 13:34:00,124 | INFO     | sum of deviations: -57459710670.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,125 | INFO     | mean x (centered): 0.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,125 | INFO     | mean y: 2401481.789473684
[2026-05-03 15:34:58] 2026-05-03 13:34:00,125 | INFO     | intersect: 2401481.789473684
[2026-05-03 15:34:58] 2026-05-03 13:34:00,125 | INFO     | chi2: 0.3437194071344547
[2026-05-03 15:34:58] 2026-05-03 13:34:00,125 | INFO     | current chi2=0.3437194071344547 (change=78.6497004937286 %)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,126 | INFO     | sum of square deviations: 1963274020.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,127 | INFO     | sum of deviations: -49718632123.00001
[2026-05-03 15:34:58] 2026-05-03 13:34:00,127 | INFO     | mean x (centered): 0.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,127 | INFO     | mean y: 2394241.1837837836
[2026-05-03 15:34:58] 2026-05-03 13:34:00,127 | INFO     | intersect: 2394241.1837837836
[2026-05-03 15:34:58] 2026-05-03 13:34:00,127 | INFO     | chi2: 0.32963515099632856
[2026-05-03 15:34:58] 2026-05-03 13:34:00,127 | INFO     | current chi2=0.32963515099632856 (change=4.097602825381553 %)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,128 | INFO     | left removable region: 10
[2026-05-03 15:34:58] 2026-05-03 13:34:00,128 | INFO     | sum of square deviations: 1778377530.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,129 | INFO     | sum of deviations: -47940861116.00001
[2026-05-03 15:34:58] 2026-05-03 13:34:00,129 | INFO     | mean x (centered): 0.0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,129 | INFO     | mean y: 2396001.3407821227
[2026-05-03 15:34:58] 2026-05-03 13:34:00,129 | INFO     | intersect: 2396001.3407821227
[2026-05-03 15:34:58] 2026-05-03 13:34:00,130 | INFO     | chi2: 0.3210095469466162
[2026-05-03 15:34:58] 2026-05-03 13:34:00,130 | INFO     | current memory leak: -26.96 B/s (using 179 data points, chi2=0.32)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,130 | INFO     | could have reported an average CPU frequency of 2550 MHz (10 samples)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,131 | INFO     | ..............................
[2026-05-03 15:34:58] 2026-05-03 13:34:00,131 | INFO     | . Timing measurements:
[2026-05-03 15:34:58] 2026-05-03 13:34:00,131 | INFO     | . get job = 0 s
[2026-05-03 15:34:58] 2026-05-03 13:34:00,131 | INFO     | . initial setup = 6 s
[2026-05-03 15:34:58] 2026-05-03 13:34:00,131 | INFO     | . payload setup = 10 s
[2026-05-03 15:34:58] 2026-05-03 13:34:00,131 | INFO     | . stage-in = 0 s
[2026-05-03 15:34:58] 2026-05-03 13:34:00,131 | INFO     | . payload execution = 11884 s
[2026-05-03 15:34:58] 2026-05-03 13:34:00,131 | INFO     | . stage-out = 1 s
[2026-05-03 15:34:58] 2026-05-03 13:34:00,131 | INFO     | . log creation = 0 s
[2026-05-03 15:34:58] 2026-05-03 13:34:00,131 | INFO     | ..............................
[2026-05-03 15:34:58] 2026-05-03 13:34:00,226 | INFO     | 
[2026-05-03 15:34:58] 2026-05-03 13:34:00,226 | INFO     | job summary report
[2026-05-03 15:34:58] 2026-05-03 13:34:00,226 | INFO     | --------------------------------------------------
[2026-05-03 15:34:58] 2026-05-03 13:34:00,226 | INFO     | PanDA job id: 7123455961
[2026-05-03 15:34:58] 2026-05-03 13:34:00,226 | INFO     | task id: 49263200
[2026-05-03 15:34:58] 2026-05-03 13:34:00,226 | INFO     | errors: (none)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,226 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 15:34:58] 2026-05-03 13:34:00,226 | INFO     | pilot state: finished 
[2026-05-03 15:34:58] 2026-05-03 13:34:00,226 | INFO     | transexitcode: 0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | exeerrorcode: 0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | exeerrordiag: 
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | exitcode: 0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | exitmsg: OK
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | cpuconsumptiontime: 44819 s
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | nevents: 400
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | neventsw: 0
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | pid: 3167190
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | pgrp: 3167190
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | corecount: 4
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | event service: False
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | sizes: {0: 2275369, 1: 2277198, 11: 2277198, 11898: 2306617, 11900: 2315637, 11903: 2315693, 11906: 2316015}
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | --------------------------------------------------
[2026-05-03 15:34:58] 2026-05-03 13:34:00,227 | INFO     | 
[2026-05-03 15:34:58] 2026-05-03 13:34:00,228 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot24/slots/3
[2026-05-03 15:34:58] 2026-05-03 13:34:00,251 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,253 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,253 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 15:34:58] 2026-05-03 13:34:00,253 | INFO     | job 7123455961 has completed (purged errors)
[2026-05-03 15:34:58] 2026-05-03 13:34:00,254 | INFO     | overall cleanup function is called
[2026-05-03 15:34:58] 2026-05-03 13:34:01,261 | INFO     | --- collectZombieJob: --- 10, [3167190]
[2026-05-03 15:34:58] 2026-05-03 13:34:01,261 | INFO     | zombie collector waiting for pid 3167190
[2026-05-03 15:34:58] 2026-05-03 13:34:01,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 15:34:58] 2026-05-03 13:34:01,261 | INFO     | collected zombie processes
[2026-05-03 15:34:58] 2026-05-03 13:34:01,261 | INFO     | will attempt to kill all subprocesses of pid=3167190
[2026-05-03 15:34:58] 2026-05-03 13:34:01,567 | INFO     | process IDs to be killed: [3167190] (in reverse order)
[2026-05-03 15:34:58] 2026-05-03 13:34:01,693 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 15:34:58] 2026-05-03 13:34:01,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 15:34:58] 2026-05-03 13:34:01,706 | INFO     | did not find any defunct processes belonging to 3167190
[2026-05-03 15:34:58] 2026-05-03 13:34:01,718 | INFO     | did not find any defunct processes belonging to 3167190
[2026-05-03 15:34:58] 2026-05-03 13:34:01,718 | INFO     | Ready for new job
[2026-05-03 15:34:58] 2026-05-03 13:34:01,720 | INFO     | ***************************************
[2026-05-03 15:34:58] 2026-05-03 13:34:01,721 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 15:34:58] 2026-05-03 13:34:01,721 | INFO     | ***************************************
[2026-05-03 15:34:58] 2026-05-03 13:34:01,721 | INFO     | 
[2026-05-03 15:34:58] 2026-05-03 13:34:01,725 | INFO     | architecture information:
[2026-05-03 15:34:58] 2026-05-03 13:34:01,725 | INFO     | executing command: cat /etc/os-release
[2026-05-03 15:34:58] 2026-05-03 13:34:01,743 | INFO     | cat /etc/os-release:
[2026-05-03 15:34:58] NAME="CentOS Linux"
[2026-05-03 15:34:58] VERSION="7 (Core)"
[2026-05-03 15:34:58] ID="centos"
[2026-05-03 15:34:58] ID_LIKE="rhel fedora"
[2026-05-03 15:34:58] VERSION_ID="7"
[2026-05-03 15:34:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 15:34:58] ANSI_COLOR="0;31"
[2026-05-03 15:34:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 15:34:58] HOME_URL="https://www.centos.org/"
[2026-05-03 15:34:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 15:34:58] 
[2026-05-03 15:34:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 15:34:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 15:34:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 15:34:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 15:34:58] 
[2026-05-03 15:34:58] 2026-05-03 13:34:01,743 | INFO     | ***************************************
[2026-05-03 15:34:58] 2026-05-03 13:34:02,245 | INFO     | executing command: df -mP /var/lib/boinc/var/slot24/slots/3
[2026-05-03 15:34:58] 2026-05-03 13:34:02,262 | INFO     | sufficient remaining disk space (54414802944 B)
[2026-05-03 15:34:58] 2026-05-03 13:34:02,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 15:34:58] 2026-05-03 13:34:02,263 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 15:34:58] 2026-05-03 13:34:02,263 | INFO     | update_server=False
[2026-05-03 15:34:58] 2026-05-03 13:34:02,263 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 15:34:58] 2026-05-03 13:34:02,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 15:34:58] 2026-05-03 13:34:02,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 15:34:58] 2026-05-03 13:34:02,799 | INFO     | aborting loop
[2026-05-03 15:34:58] 2026-05-03 13:34:03,245 | INFO     | all payload control threads have been joined
[2026-05-03 15:34:58] 2026-05-03 13:34:03,268 | INFO     | [job] retrieve thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:03,270 | INFO     | all data control threads have been joined
[2026-05-03 15:34:58] 2026-05-03 13:34:03,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 15:34:58] 2026-05-03 13:34:03,363 | INFO     | all job control threads have been joined
[2026-05-03 15:34:58] 2026-05-03 13:34:03,512 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:03,804 | INFO     | [job] job monitor thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:04,187 | INFO     | [payload] failed_post thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:04,220 | INFO     | [data] copytool_in thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:04,250 | INFO     | [payload] control thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:04,269 | INFO     | [data] copytool_out thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:04,271 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:04,275 | INFO     | [data] control thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:04,292 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:04,343 | INFO     | [payload] validate_post thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:04,368 | INFO     | [job] control thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:04,372 | INFO     | [job] validate thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:05,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 15:34:58] 2026-05-03 13:34:06,240 | INFO     | [job] queue monitor thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:07,347 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:13,280 | INFO     | job.realtimelogging is not enabled
[2026-05-03 15:34:58] 2026-05-03 13:34:14,285 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 15:34:58] 2026-05-03 13:34:31,855 | INFO     | PID=3161761 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 15:34:58] 2026-05-03 13:34:31,855 | INFO     | .. there are 11 such processes running
[2026-05-03 15:34:58] 2026-05-03 13:34:31,856 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 15:34:58] 2026-05-03 13:34:31,856 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 15:34:58] 2026-05-03 13:34:31,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 15:34:58] 2026-05-03 13:34:42,623 | INFO     | [monitor] cgroup control has ended
[2026-05-03 15:34:58] 2026-05-03 13:34:43,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22400355981120)>', '<ExcThread(monitor, started 22400049575680)>']
[2026-05-03 15:34:58] 2026-05-03 13:34:43,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 15:34:58] 2026-05-03 13:34:43,916 | INFO     | [monitor] control thread has ended
[2026-05-03 15:34:58] 2026-05-03 13:34:48,164 | INFO     | all workflow threads have been joined
[2026-05-03 15:34:58] 2026-05-03 13:34:48,164 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 15:34:58] 2026-05-03 13:34:48,165 | INFO     | traces error code: 0
[2026-05-03 15:34:58] 2026-05-03 13:34:48,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 15:34:58] 2026-05-03 13:34:48,364 [wrapper] ==== pilot stdout END ====
[2026-05-03 15:34:58] 2026-05-03 13:34:48,368 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 15:34:58] 2026-05-03 13:34:48,370 [wrapper] pilotpid: 3161761
[2026-05-03 15:34:58] 2026-05-03 13:34:48,373 [wrapper] Pilot exit status: 0
[2026-05-03 15:34:58] 2026-05-03 13:34:48,384 [wrapper] pandaids: 7123455961
[2026-05-03 15:34:58] 2026-05-03 13:34:48,463 [wrapper] cleanup supervisor_pilot 3436129 3161762
[2026-05-03 15:34:58] 2026-05-03 13:34:48,466 [wrapper] Test setup, not cleaning
[2026-05-03 15:34:58] 2026-05-03 13:34:48,469 [wrapper] apfmon messages muted
[2026-05-03 15:34:58] 2026-05-03 13:34:48,472 [wrapper] ==== wrapper stdout END ====
[2026-05-03 15:34:58] 2026-05-03 13:34:48,474 [wrapper] ==== wrapper stderr END ====
[2026-05-03 15:34:58]  *** Error codes and diagnostics ***
[2026-05-03 15:34:58]     "exeErrorCode": 0,
[2026-05-03 15:34:58]     "pilotErrorCode": 0,
[2026-05-03 15:34:58]  *** Listing of results directory ***
[2026-05-03 15:34:58] total 416460
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc      5631 May  2 06:04 queuedata.json
[2026-05-03 15:34:58] -rwx------. 1 boinc boinc     36322 May  2 06:05 runpilot2-wrapper.sh
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc    683926 May  2 06:06 pilot3.tar.gz
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc       100 May  3 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 15:34:58] -rwxr-xr-x. 1 boinc boinc      7986 May  3 12:15 run_atlas
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc       105 May  3 12:15 job.xml
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc      6482 May  3 12:15 init_data.xml
[2026-05-03 15:34:58] -rw-r--r--. 2 boinc boinc 223093279 May  3 12:15 EVNT.49263198._001970.pool.root.1
[2026-05-03 15:34:58] drwxrwx--x. 2 boinc boinc      4096 May  3 12:15 shared
[2026-05-03 15:34:58] -rw-r--r--. 2 boinc boinc    697428 May  3 12:15 input.tar.gz
[2026-05-03 15:34:58] -rw-r--r--. 2 boinc boinc     15667 May  3 12:15 start_atlas.sh
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc         0 May  3 12:15 boinc_lockfile
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc      2577 May  3 12:15 pandaJob.out
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc   1003014 May  3 12:15 agis_schedconf.cvmfs.json
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc       444 May  3 12:15 workernode_map.json
[2026-05-03 15:34:58] drwx------. 5 boinc boinc      4096 May  3 12:15 pilot3
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc 196388652 May  3 15:33 HITS.49263200._090003.pool.root.1
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc       486 May  3 15:33 boinc_task_state.xml
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc      1035 May  3 15:33 memory_monitor_summary.json
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc   1508687 May  3 15:33 agis_ddmendpoints.agis.ALL.json
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc    302129 May  3 15:33 log.49263200._090003.job.log.tgz.1
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc      6424 May  3 15:34 heartbeat_new.json
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc      6315 May  3 15:34 heartbeat.json
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc        26 May  3 15:34 wrapper_checkpoint.txt
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc        95 May  3 15:34 pilot_heartbeat.json
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc      4904 May  3 15:34 pilotlog.txt
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc   1116654 May  3 15:34 log.49263200._090003.job.log.1
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc       357 May  3 15:34 output.list
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc       410 May  3 15:34 runtime_log
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc   1433600 May  3 15:34 result.tar.gz
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc      8828 May  3 15:34 runtime_log.err
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc       666 May  3 15:34 780606b0fd8c.diag
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc      8192 May  3 15:34 boinc_mmap_file
[2026-05-03 15:34:58] -rw-r--r--. 1 boinc boinc     21055 May  3 15:34 stderr.txt
[2026-05-03 15:34:58] HITS file was successfully produced:
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc 196388652 May  3 15:33 shared/HITS.pool.root.1
[2026-05-03 15:34:58]  *** Contents of shared directory: ***
[2026-05-03 15:34:58] total 411764
[2026-05-03 15:34:58] -rw-r--r--. 2 boinc boinc 223093279 May  3 12:15 ATLAS.root_0
[2026-05-03 15:34:58] -rw-r--r--. 2 boinc boinc    697428 May  3 12:15 input.tar.gz
[2026-05-03 15:34:58] -rw-r--r--. 2 boinc boinc     15667 May  3 12:15 start_atlas.sh
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc 196388652 May  3 15:33 HITS.pool.root.1
[2026-05-03 15:34:58] -rw-------. 1 boinc boinc   1433600 May  3 15:34 result.tar.gz
15:35:00 (3157617): run_atlas exited; CPU time 45255.884858
15:35:00 (3157617): called boinc_finish(0)

</stderr_txt>
]]>

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