Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:56:55 (3071141): wrapper (7.7.26015): starting
04:56:55 (3071141): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 04:56:55] Arguments: --nthreads 4
[2026-05-04 04:56:55] Threads: 4
[2026-05-04 04:56:55] Checking for CVMFS
[2026-05-04 04:56:55] No cvmfs_config command found, will try listing directly
[2026-05-04 04:56:55] CVMFS is ok
[2026-05-04 04:56:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 04:56:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 04:56:55] Further information can be found at the LHC@home message board.
[2026-05-04 04:56:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 04:56:55] Checking for apptainer binary...
[2026-05-04 04:56:55] which: no apptainer in ((null))
[2026-05-04 04:56:55] apptainer is not installed, using version from CVMFS
[2026-05-04 04:56:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 04:56:56] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-05-04 04:56:56] apptainer works
[2026-05-04 04:56:56] Set ATHENA_PROC_NUMBER=4
[2026-05-04 04:56:56] Set ATHENA_CORE_NUMBER=4
[2026-05-04 04:56:56] Starting ATLAS job with PandaID=7123456037
[2026-05-04 04:56:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 07:56:34]  *** The last 200 lines of the pilot log: ***
[2026-05-04 07:56:34] 2026-05-04 05:55:54,056 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/PanDA_Pilot-7123456037/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 07:56:34] 2026-05-04 05:55:54,057 | INFO     | extracted standard info from prmon json
[2026-05-04 07:56:34] 2026-05-04 05:55:54,057 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 07:56:34] 2026-05-04 05:55:54,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 07:56:34] 2026-05-04 05:55:54,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 07:56:34] 2026-05-04 05:55:54,061 | INFO     | fitting pss+swap vs Time
[2026-05-04 07:56:34] 2026-05-04 05:55:54,061 | INFO     | sum of square deviations: 1690450300.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,062 | INFO     | sum of deviations: 14294888473.999992
[2026-05-04 07:56:34] 2026-05-04 05:55:54,063 | INFO     | mean x (centered): 0.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,063 | INFO     | mean y: 2297089.2954545454
[2026-05-04 07:56:34] 2026-05-04 05:55:54,063 | INFO     | intersect: 2297089.2954545454
[2026-05-04 07:56:34] 2026-05-04 05:55:54,063 | INFO     | chi2: 2.1877948220056487
[2026-05-04 07:56:34] 2026-05-04 05:55:54,063 | INFO     | sum of square deviations: 1550429070.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,065 | INFO     | sum of deviations: 24671480072.999996
[2026-05-04 07:56:34] 2026-05-04 05:55:54,065 | INFO     | mean x (centered): 0.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,065 | INFO     | mean y: 2308115.2573099416
[2026-05-04 07:56:34] 2026-05-04 05:55:54,065 | INFO     | intersect: 2308115.2573099416
[2026-05-04 07:56:34] 2026-05-04 05:55:54,065 | INFO     | chi2: 1.3936727020273048
[2026-05-04 07:56:34] 2026-05-04 05:55:54,065 | INFO     | current chi2=1.3936727020273048 (change=36.29783341613072 %)
[2026-05-04 07:56:34] 2026-05-04 05:55:54,066 | INFO     | sum of square deviations: 1418361477.5
[2026-05-04 07:56:34] 2026-05-04 05:55:54,067 | INFO     | sum of deviations: 23872357625.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,067 | INFO     | mean x (centered): 0.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,067 | INFO     | mean y: 2307192.2409638553
[2026-05-04 07:56:34] 2026-05-04 05:55:54,067 | INFO     | intersect: 2307192.2409638553
[2026-05-04 07:56:34] 2026-05-04 05:55:54,067 | INFO     | chi2: 1.3945668555910518
[2026-05-04 07:56:34] 2026-05-04 05:55:54,067 | INFO     | current chi2=1.3945668555910518 (change=-0.06415807401883689 %)
[2026-05-04 07:56:34] 2026-05-04 05:55:54,068 | INFO     | right removable region: 165
[2026-05-04 07:56:34] 2026-05-04 05:55:54,068 | INFO     | sum of square deviations: 1550429070.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,069 | INFO     | sum of deviations: -9761449238.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,069 | INFO     | mean x (centered): 0.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,069 | INFO     | mean y: 2322946.1052631577
[2026-05-04 07:56:34] 2026-05-04 05:55:54,069 | INFO     | intersect: 2322946.1052631577
[2026-05-04 07:56:34] 2026-05-04 05:55:54,070 | INFO     | chi2: 0.8205054952769858
[2026-05-04 07:56:34] 2026-05-04 05:55:54,070 | INFO     | current chi2=0.8205054952769858 (change=62.49623195813252 %)
[2026-05-04 07:56:34] 2026-05-04 05:55:54,070 | INFO     | sum of square deviations: 1418361477.5
[2026-05-04 07:56:34] 2026-05-04 05:55:54,071 | INFO     | sum of deviations: -9534353344.499998
[2026-05-04 07:56:34] 2026-05-04 05:55:54,071 | INFO     | mean x (centered): 0.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,071 | INFO     | mean y: 2322677.391566265
[2026-05-04 07:56:34] 2026-05-04 05:55:54,071 | INFO     | intersect: 2322677.391566265
[2026-05-04 07:56:34] 2026-05-04 05:55:54,072 | INFO     | chi2: 0.8207890295589566
[2026-05-04 07:56:34] 2026-05-04 05:55:54,072 | INFO     | current chi2=0.8207890295589566 (change=-0.034556049118853786 %)
[2026-05-04 07:56:34] 2026-05-04 05:55:54,072 | INFO     | left removable region: 10
[2026-05-04 07:56:34] 2026-05-04 05:55:54,072 | INFO     | sum of square deviations: 1154663510.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,073 | INFO     | sum of deviations: 809563513.0000008
[2026-05-04 07:56:34] 2026-05-04 05:55:54,073 | INFO     | mean x (centered): 0.0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,073 | INFO     | mean y: 2335044.4064516127
[2026-05-04 07:56:34] 2026-05-04 05:55:54,074 | INFO     | intersect: 2335044.4064516127
[2026-05-04 07:56:34] 2026-05-04 05:55:54,074 | INFO     | chi2: 0.003402354721139261
[2026-05-04 07:56:34] 2026-05-04 05:55:54,074 | INFO     | current memory leak: 0.70 B/s (using 155 data points, chi2=0.00)
[2026-05-04 07:56:34] 2026-05-04 05:55:54,074 | INFO     | could have reported an average CPU frequency of 2570 MHz (9 samples)
[2026-05-04 07:56:34] 2026-05-04 05:55:54,075 | INFO     | ..............................
[2026-05-04 07:56:34] 2026-05-04 05:55:54,075 | INFO     | . Timing measurements:
[2026-05-04 07:56:34] 2026-05-04 05:55:54,075 | INFO     | . get job = 0 s
[2026-05-04 07:56:34] 2026-05-04 05:55:54,075 | INFO     | . initial setup = 5 s
[2026-05-04 07:56:34] 2026-05-04 05:55:54,076 | INFO     | . payload setup = 9 s
[2026-05-04 07:56:34] 2026-05-04 05:55:54,076 | INFO     | . stage-in = 0 s
[2026-05-04 07:56:34] 2026-05-04 05:55:54,077 | INFO     | . payload execution = 10693 s
[2026-05-04 07:56:34] 2026-05-04 05:55:54,077 | INFO     | . stage-out = 0 s
[2026-05-04 07:56:34] 2026-05-04 05:55:54,077 | INFO     | . log creation = 0 s
[2026-05-04 07:56:34] 2026-05-04 05:55:54,077 | INFO     | ..............................
[2026-05-04 07:56:34] 2026-05-04 05:55:54,428 | INFO     | 
[2026-05-04 07:56:34] 2026-05-04 05:55:54,428 | INFO     | job summary report
[2026-05-04 07:56:34] 2026-05-04 05:55:54,428 | INFO     | --------------------------------------------------
[2026-05-04 07:56:34] 2026-05-04 05:55:54,428 | INFO     | PanDA job id: 7123456037
[2026-05-04 07:56:34] 2026-05-04 05:55:54,428 | INFO     | task id: 49263200
[2026-05-04 07:56:34] 2026-05-04 05:55:54,428 | INFO     | errors: (none)
[2026-05-04 07:56:34] 2026-05-04 05:55:54,428 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | pilot state: finished 
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | transexitcode: 0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | exeerrorcode: 0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | exeerrordiag: 
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | exitcode: 0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | exitmsg: OK
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | cpuconsumptiontime: 41368 s
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | nevents: 400
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | neventsw: 0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | pid: 3080256
[2026-05-04 07:56:34] 2026-05-04 05:55:54,429 | INFO     | pgrp: 3080256
[2026-05-04 07:56:34] 2026-05-04 05:55:54,430 | INFO     | corecount: 4
[2026-05-04 07:56:34] 2026-05-04 05:55:54,430 | INFO     | event service: False
[2026-05-04 07:56:34] 2026-05-04 05:55:54,430 | INFO     | sizes: {0: 2277170, 11: 2277170, 10706: 2306137, 10708: 2315157, 10709: 2315213, 10711: 2315471}
[2026-05-04 07:56:34] 2026-05-04 05:55:54,430 | INFO     | --------------------------------------------------
[2026-05-04 07:56:34] 2026-05-04 05:55:54,430 | INFO     | 
[2026-05-04 07:56:34] 2026-05-04 05:55:54,430 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot52/slots/0
[2026-05-04 07:56:34] 2026-05-04 05:55:54,450 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,450 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,450 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,450 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,452 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 07:56:34] 2026-05-04 05:55:54,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,452 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 07:56:34] 2026-05-04 05:55:54,452 | INFO     | job 7123456037 has completed (purged errors)
[2026-05-04 07:56:34] 2026-05-04 05:55:54,452 | INFO     | overall cleanup function is called
[2026-05-04 07:56:34] 2026-05-04 05:55:55,460 | INFO     | --- collectZombieJob: --- 10, [3080256]
[2026-05-04 07:56:34] 2026-05-04 05:55:55,460 | INFO     | zombie collector waiting for pid 3080256
[2026-05-04 07:56:34] 2026-05-04 05:55:55,460 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 07:56:34] 2026-05-04 05:55:55,461 | INFO     | collected zombie processes
[2026-05-04 07:56:34] 2026-05-04 05:55:55,461 | INFO     | will attempt to kill all subprocesses of pid=3080256
[2026-05-04 07:56:34] 2026-05-04 05:55:55,509 | WARNING  | process 3080256 can no longer be monitored (due to stat problems) - aborting
[2026-05-04 07:56:34] 2026-05-04 05:55:56,292 | INFO     | using path: /var/lib/boinc/var/slot52/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 07:56:34] 2026-05-04 05:55:56,343 | INFO     | process IDs to be killed: [3080256] (in reverse order)
[2026-05-04 07:56:34] 2026-05-04 05:55:56,432 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 07:56:34] 2026-05-04 05:55:56,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 07:56:34] 2026-05-04 05:55:56,461 | INFO     | did not find any defunct processes belonging to 3080256
[2026-05-04 07:56:34] 2026-05-04 05:55:56,489 | INFO     | did not find any defunct processes belonging to 3080256
[2026-05-04 07:56:34] 2026-05-04 05:55:56,490 | INFO     | Ready for new job
[2026-05-04 07:56:34] 2026-05-04 05:55:56,492 | INFO     | ***************************************
[2026-05-04 07:56:34] 2026-05-04 05:55:56,492 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 07:56:34] 2026-05-04 05:55:56,492 | INFO     | ***************************************
[2026-05-04 07:56:34] 2026-05-04 05:55:56,492 | INFO     | 
[2026-05-04 07:56:34] 2026-05-04 05:55:56,497 | INFO     | architecture information:
[2026-05-04 07:56:34] 2026-05-04 05:55:56,497 | INFO     | executing command: cat /etc/os-release
[2026-05-04 07:56:34] 2026-05-04 05:55:56,513 | INFO     | cat /etc/os-release:
[2026-05-04 07:56:34] NAME="CentOS Linux"
[2026-05-04 07:56:34] VERSION="7 (Core)"
[2026-05-04 07:56:34] ID="centos"
[2026-05-04 07:56:34] ID_LIKE="rhel fedora"
[2026-05-04 07:56:34] VERSION_ID="7"
[2026-05-04 07:56:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 07:56:34] ANSI_COLOR="0;31"
[2026-05-04 07:56:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 07:56:34] HOME_URL="https://www.centos.org/"
[2026-05-04 07:56:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 07:56:34] 
[2026-05-04 07:56:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 07:56:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 07:56:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 07:56:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 07:56:34] 
[2026-05-04 07:56:34] 2026-05-04 05:55:56,514 | INFO     | ***************************************
[2026-05-04 07:56:34] 2026-05-04 05:55:56,695 | INFO     | number of running child processes to parent process 3080256: 1
[2026-05-04 07:56:34] 2026-05-04 05:55:56,695 | INFO     | maximum number of monitored processes: 6
[2026-05-04 07:56:34] 2026-05-04 05:55:56,696 | INFO     | aborting job monitoring since job object (job id=7123456037) has expired
[2026-05-04 07:56:34] 2026-05-04 05:55:57,016 | INFO     | executing command: df -mP /var/lib/boinc/var/slot52/slots/0
[2026-05-04 07:56:34] 2026-05-04 05:55:57,032 | INFO     | sufficient remaining disk space (46379565056 B)
[2026-05-04 07:56:34] 2026-05-04 05:55:57,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 07:56:34] 2026-05-04 05:55:57,033 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 07:56:34] 2026-05-04 05:55:57,033 | INFO     | update_server=False
[2026-05-04 07:56:34] 2026-05-04 05:55:57,033 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 07:56:34] 2026-05-04 05:55:57,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 07:56:34] 2026-05-04 05:55:57,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 07:56:34] 2026-05-04 05:55:57,034 | INFO     | will abort loop
[2026-05-04 07:56:34] 2026-05-04 05:55:57,289 | INFO     | all payload control threads have been joined
[2026-05-04 07:56:34] 2026-05-04 05:55:58,008 | INFO     | all data control threads have been joined
[2026-05-04 07:56:34] 2026-05-04 05:55:58,038 | INFO     | [job] retrieve thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:58,039 | INFO     | [job] job monitor thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:58,049 | INFO     | [data] copytool_in thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:58,095 | INFO     | all job control threads have been joined
[2026-05-04 07:56:34] 2026-05-04 05:55:58,246 | INFO     | [payload] failed_post thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:58,294 | INFO     | [payload] control thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:58,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 07:56:34] 2026-05-04 05:55:58,662 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:58,918 | INFO     | [job] validate thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:58,970 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:59,014 | INFO     | [data] control thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:59,039 | INFO     | [data] copytool_out thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:59,100 | INFO     | [job] control thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:59,189 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 07:56:34] 2026-05-04 05:55:59,278 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:55:59,358 | INFO     | [payload] validate_post thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:56:00,194 | INFO     | [job] queue monitor thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:56:02,448 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:56:07,502 | INFO     | job.realtimelogging is not enabled
[2026-05-04 07:56:34] 2026-05-04 05:56:08,507 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 07:56:34] 2026-05-04 05:56:26,634 | INFO     | PID=3075075 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 07:56:34] 2026-05-04 05:56:26,635 | INFO     | .. there are 12 such processes running
[2026-05-04 07:56:34] 2026-05-04 05:56:26,636 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 07:56:34] 2026-05-04 05:56:26,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 07:56:34] 2026-05-04 05:56:26,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 07:56:34] 2026-05-04 05:56:28,590 | INFO     | [monitor] cgroup control has ended
[2026-05-04 07:56:34] 2026-05-04 05:56:29,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23353956034368)>', '<ExcThread(monitor, started 23353720321792)>']
[2026-05-04 07:56:34] 2026-05-04 05:56:29,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 07:56:34] 2026-05-04 05:56:29,649 | INFO     | [monitor] control thread has ended
[2026-05-04 07:56:34] 2026-05-04 05:56:34,343 | INFO     | all workflow threads have been joined
[2026-05-04 07:56:34] 2026-05-04 05:56:34,344 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 07:56:34] 2026-05-04 05:56:34,344 | INFO     | traces error code: 0
[2026-05-04 07:56:34] 2026-05-04 05:56:34,344 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 07:56:34] 2026-05-04 05:56:34,489 [wrapper] ==== pilot stdout END ====
[2026-05-04 07:56:34] 2026-05-04 05:56:34,492 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 07:56:34] 2026-05-04 05:56:34,495 [wrapper] pilotpid: 3075075
[2026-05-04 07:56:34] 2026-05-04 05:56:34,498 [wrapper] Pilot exit status: 0
[2026-05-04 07:56:34] 2026-05-04 05:56:34,508 [wrapper] pandaids: 7123456037
[2026-05-04 07:56:34] 2026-05-04 05:56:34,579 [wrapper] cleanup supervisor_pilot 3283461 3075076
[2026-05-04 07:56:34] 2026-05-04 05:56:34,583 [wrapper] Test setup, not cleaning
[2026-05-04 07:56:34] 2026-05-04 05:56:34,586 [wrapper] apfmon messages muted
[2026-05-04 07:56:34] 2026-05-04 05:56:34,589 [wrapper] ==== wrapper stdout END ====
[2026-05-04 07:56:34] 2026-05-04 05:56:34,591 [wrapper] ==== wrapper stderr END ====
[2026-05-04 07:56:34]  *** Error codes and diagnostics ***
[2026-05-04 07:56:34]     "exeErrorCode": 0,
[2026-05-04 07:56:34]     "pilotErrorCode": 0,
[2026-05-04 07:56:34]  *** Listing of results directory ***
[2026-05-04 07:56:34] total 418500
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc      5631 May  2 06:04 queuedata.json
[2026-05-04 07:56:34] -rwx------. 1 boinc boinc     36322 May  2 06:05 runpilot2-wrapper.sh
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc    683926 May  2 06:06 pilot3.tar.gz
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc       100 May  4 04:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 07:56:34] -rwxr-xr-x. 1 boinc boinc      7986 May  4 04:56 run_atlas
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc       105 May  4 04:56 job.xml
[2026-05-04 07:56:34] -rw-r--r--. 2 boinc boinc 227714079 May  4 04:56 EVNT.49263198._001967.pool.root.1
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc      6482 May  4 04:56 init_data.xml
[2026-05-04 07:56:34] -rw-r--r--. 2 boinc boinc     15667 May  4 04:56 start_atlas.sh
[2026-05-04 07:56:34] drwxrwx--x. 2 boinc boinc      4096 May  4 04:56 shared
[2026-05-04 07:56:34] -rw-r--r--. 2 boinc boinc    697431 May  4 04:56 input.tar.gz
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc         0 May  4 04:56 boinc_lockfile
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc      2577 May  4 04:56 pandaJob.out
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc   1003025 May  4 04:57 agis_schedconf.cvmfs.json
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc   1508687 May  4 04:57 agis_ddmendpoints.agis.ALL.json
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc       452 May  4 04:57 workernode_map.json
[2026-05-04 07:56:34] drwx------. 5 boinc boinc      4096 May  4 04:57 pilot3
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc 194059530 May  4 07:55 HITS.49263200._090079.pool.root.1
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc       488 May  4 07:55 boinc_task_state.xml
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc      1033 May  4 07:55 memory_monitor_summary.json
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc    297993 May  4 07:55 log.49263200._090079.job.log.tgz.1
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc      6422 May  4 07:55 heartbeat_new.json
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc      6313 May  4 07:55 heartbeat.json
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc        95 May  4 07:56 pilot_heartbeat.json
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc      8192 May  4 07:56 boinc_mmap_file
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc        28 May  4 07:56 wrapper_checkpoint.txt
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc      5194 May  4 07:56 pilotlog.txt
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc   1020106 May  4 07:56 log.49263200._090079.job.log.1
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc       357 May  4 07:56 output.list
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc       410 May  4 07:56 runtime_log
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc   1331200 May  4 07:56 result.tar.gz
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc      8828 May  4 07:56 runtime_log.err
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc       664 May  4 07:56 7810cee7b6e4.diag
[2026-05-04 07:56:34] -rw-r--r--. 1 boinc boinc     20830 May  4 07:56 stderr.txt
[2026-05-04 07:56:34] HITS file was successfully produced:
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc 194059530 May  4 07:55 shared/HITS.pool.root.1
[2026-05-04 07:56:34]  *** Contents of shared directory: ***
[2026-05-04 07:56:34] total 413900
[2026-05-04 07:56:34] -rw-r--r--. 2 boinc boinc 227714079 May  4 04:56 ATLAS.root_0
[2026-05-04 07:56:34] -rw-r--r--. 2 boinc boinc     15667 May  4 04:56 start_atlas.sh
[2026-05-04 07:56:34] -rw-r--r--. 2 boinc boinc    697431 May  4 04:56 input.tar.gz
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc 194059530 May  4 07:55 HITS.pool.root.1
[2026-05-04 07:56:34] -rw-------. 1 boinc boinc   1331200 May  4 07:56 result.tar.gz
07:56:36 (3071141): run_atlas exited; CPU time 41761.563762
07:56:36 (3071141): called boinc_finish(0)

</stderr_txt>
]]>

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